Rmu_sc0001932.1_g000028

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001932.1
OG0000105
Physical Location & Seq
Forward (+)
138567 .. 141899
3333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001932.1_g000028.1.cds

Sequence Viewer

Length: 2991 bp
atgggttcccgtattgatagtttattaagcaaatacatatatccgcagcttgatggggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctcgagctatccatgatgaaatttgtcaggattttgaccgaacctgctttctttccaatgttagagaaatgtccaaaaacaatggcctagtttctctacaagaaaaacttctttccagaatcctgatggctaaaattgaaaatatagaggatgaatacacaggagctgctatgatagaaaggcggtcgtgtagaatgaaggtgcttgttgttattgatgatgtggatcagttgatacaattagaaaaattggctggaaatcgcaactggtttggtccggggagtagaattatcataaccaccacagatattcagttgttaaaggcgcatgatgttgatgctacatacaaggctaacgggttaaattgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatttcccccaccagaagattatttgcatctgtgctaccgtattttagggtatgctcaggggcttccgttggctcttgtggttttaggttcgtttttatttggtagaagaactgatcaatgggcaagtgcaatagataggctaaagaacacaccagataaacgcattattgaggtgcttcggattagttttgatggactagatgaaaaagacagagaaatattcctacatattgcttgcttttacaaggggaaggattatgatcgtgtgatacaaatactagactattgccaactaaaccctgtcattggtttgagtgttcttgctgatagatctctcataactatctccaacaatgaactgtggatgcatgatttgctacaagaattgggctgggaaattgttcgtgaacagtctcccaaagagccaggcaaacgtagtagactatggtctcatgaagacatcaacaatgtgctgaaaaaaaatatgggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaatccagaagccttttcaaatttgtctcaactcagtcttctccatattcataatgtggaccttcccgaaggcctcacttgtctttctaattccttgagactcctcgaatggactgggtatcccttaagatctcttccaaaaaattttgaagcagatgaacttattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaattttgacaggttgaagttcatcaaactctgtcattctcaaaatattgtggagaccccagacctcgcaggcgttcagaatcttgaaagtttagatcttgaaggatgtgagaatttggttagaatccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaaatctcaagagtctgccaagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaatgtttgtcggtgctttatcttgatgagactgccattgaggaactgcctgtgtcaattgaacggctgagtggtcttgtgtcattgaatctgagcaaatgcagaaatcttgtccgtcttccgagcaccatcaataaattgaagtctattaaaaatcttgatctttctggatgcttgaaactcggcaaacatcaggtaaatgtgggggagatatattgttttgaggaaaatgatgtgaatagtaggtctgcaatagaaatgtcatcttcccatgatctcataaaatctgtgagaggttcaatctttcatgtatatgaagtagtttggggatctttaaataagttcttgccttctggattggtgcaaaaagtgaatgcagggccatcgagtttccgcttgcctatttctggtttgtgtaatttaacgtatctgaacctgagtaattgcaatcttggtgaaggagcatttcccaacgaatttggttactttccctctttggtgaccttgaatctaagtggaaaccattttgttcgcgttccttcaggcattcgattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttatcagaccttccatcaaatagtagactagatttaagggcagatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaatagactaaacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaagaaaggatgcaataatatagcatttgaaatgctgaagacattcatgtatcagggaatctctaataacagggaaacttttcaaattgtaattcctggaagtaatattcccaagtggttcggccatcagagtgttgggtgttcattaagtgtacctctacctgcagattggaataacagtcggtttttaggatttgctttgtgtgctgattttgtactccgtgagcaccatcgggtggatgagctttatatagatgaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagatcgatggaagagaactggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttgaatcaaatcacctgtggctattctatgtatctcgtgataaatactttggtacagagtggtggcataacagttgcagtcagcttgagttcttatttgaaaccagagggccgggtctgaaggtgaaggagtgtggagtccgtctgatatacgagcaagaagtgcaaggcctgaaccaaacaaccactcaatcaagcagtaggatgtctccttatgcagacatattgattggttttgacattccaggtggaggggaaaccagtggcactggtagcagaacttgcacacttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

996

Amino Acids

113.07

Weight (kDa)

6.5

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 161, 2485
AccB7I CCANNNNNTGG 2 cut(s) 1027, 2551
AccI GTMKAC 2 cut(s) 958, 2200
AccII CGCG 1 cut(s) 2103
AciI CCGC 4 cut(s) 44, 85, 292, 1963
AclWI GGATC 4 cut(s) 67, 80, 342, 1906
AcoI YGGCCR 1 cut(s) 2437
AcuI CTGAAG 4 cut(s) 2094, 2372, 2636, 2828
AfaI GTAC 4 cut(s) 2227, 2469, 2532, 2743
AfiI CCNNNNNNNGG 5 cut(s) 824, 1027, 1976, 2551, 2939
AflII CTTAAG 1 cut(s) 1189
AjnI CCWGG 4 cut(s) 943, 2410, 2685, 2932
AjuI GAANNNNNNNTTGG 2 cut(s) 2132, 2164
AluBI AGCT 8 cut(s) 49, 116, 275, 1264, 1435, 2134, 2560, 2773
AluI AGCT 8 cut(s) 49, 116, 275, 1264, 1435, 2134, 2560, 2773
Alw21I GWGCWC 2 cut(s) 1697, 2544
Alw26I GTCTC 8 cut(s) 936, 972, 1095, 1156, 1328, 1592, 2158, 2901
AlwI GGATC 4 cut(s) 67, 80, 342, 1906
AlwNI CAGNNNCTG 1 cut(s) 275
Ama87I CYCGRG 2 cut(s) 111, 1550
AoxI GGCC 6 cut(s) 193, 1135, 1949, 2437, 2798, 2857
ApeKI GCWGC 2 cut(s) 46, 275
AseI ATTAAT 1 cut(s) 1514
Asp700I GAANNNNTTC 6 cut(s) 216, 486, 918, 1012, 2357, 2394
AspLEI GCGC 1 cut(s) 436
AspS9I GGNCC 4 cut(s) 383, 1123, 1949, 2798
AsuC2I CCSGG 2 cut(s) 387, 2802
AsuHPI GGTGA 4 cut(s) 2036, 2080, 2693, 2824
AvaI CYCGRG 2 cut(s) 111, 1550
AvaII GGWCC 2 cut(s) 383, 1123
BamHI GGATCC 1 cut(s) 72
BauI CACGAG 1 cut(s) 2724
BbsI GAAGAC 4 cut(s) 981, 1094, 1679, 2360
Bbv12I GWGCWC 2 cut(s) 1697, 2544
BbvI GCAGC 2 cut(s) 58, 262
BceAI ACGGC 1 cut(s) 1649
BcgI CGANNNNNNTGC 2 cut(s) 1935, 1969
BciT130I CCWGG 4 cut(s) 945, 2412, 2687, 2934
BciVI GTATCC 1 cut(s) 1194
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 2 cut(s) 387, 2802
BcoDI GTCTC 8 cut(s) 936, 972, 1095, 1156, 1328, 1592, 2158, 2901
BfaI CTAG 4 cut(s) 197, 716, 797, 2204
BfmI CTRYAG 1 cut(s) 2478
BfrI CTTAAG 1 cut(s) 1189
BfuAI ACCTGC 2 cut(s) 161, 2485
BfuI GTATCC 1 cut(s) 1194
BglII AGATCT 3 cut(s) 848, 1193, 1375
BisI GCNGC 2 cut(s) 47, 276
BlsI GCNGC 2 cut(s) 48, 277
Bme1390I CCNGG 6 cut(s) 387, 945, 2412, 2687, 2802, 2934
Bme18I GGWCC 2 cut(s) 383, 1123
BmeT110I CYCGRG 2 cut(s) 111, 1550
BmgT120I GGNCC 4 cut(s) 383, 1123, 1949, 2798
BmiI GGNNCC 2 cut(s) 7, 74
BmrFI CCNGG 6 cut(s) 387, 945, 2412, 2687, 2802, 2934
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 7 cut(s) 436, 553, 873, 1730, 2239, 2261, 2315
BmuI ACTGGG 1 cut(s) 1188
BoxI GACNNNNGTC 1 cut(s) 964
BpiI GAAGAC 4 cut(s) 981, 1094, 1679, 2360
Bpu10I CCTNAGC 1 cut(s) 573
BpuEI CTTGAG 4 cut(s) 1180, 1454, 2156, 2795
BpuMI CCSGG 2 cut(s) 387, 2802
Bsa29I ATCGAT 1 cut(s) 2622
BsaBI GATNNNNATC 2 cut(s) 333, 777
BsaI GGTCTC 2 cut(s) 972, 1328
BsaJI CCNNGG 4 cut(s) 76, 386, 1021, 1417
Bsc4I CCNNNNNNNGG 5 cut(s) 824, 1027, 1976, 2551, 2939
Bse1I ACTGG 5 cut(s) 380, 1183, 2640, 2949, 2962
Bse8I GATNNNNATC 2 cut(s) 333, 777
BseBI CCWGG 4 cut(s) 945, 2412, 2687, 2934
BseCI ATCGAT 1 cut(s) 2622
BseDI CCNNGG 4 cut(s) 76, 386, 1021, 1417
BseGI GGATG 7 cut(s) 265, 888, 1391, 1745, 2330, 2560, 2898
BseJI GATNNNNATC 2 cut(s) 333, 777
BseLI CCNNNNNNNGG 5 cut(s) 824, 1027, 1976, 2551, 2939
BseMII CTCAG 5 cut(s) 587, 1111, 1628, 1652, 1997
BseNI ACTGG 5 cut(s) 380, 1183, 2640, 2949, 2962
BseRI GAGGAG 1 cut(s) 1157
BseXI GCAGC 2 cut(s) 58, 262
BseYI CCCAGC 1 cut(s) 909
Bsh1236I CGCG 1 cut(s) 2103
Bsh1285I CGRYCG 1 cut(s) 296
BshFI GGCC 6 cut(s) 195, 1137, 1951, 2439, 2800, 2859
BshVI ATCGAT 1 cut(s) 2622
BsiEI CGRYCG 1 cut(s) 296
BsiHKAI GWGCWC 2 cut(s) 1697, 2544
BsiHKCI CYCGRG 2 cut(s) 111, 1550
BsiSI CCGG 2 cut(s) 386, 2801
BslI CCNNNNNNNGG 5 cut(s) 824, 1027, 1976, 2551, 2939
BsmAI GTCTC 8 cut(s) 936, 972, 1095, 1156, 1328, 1592, 2158, 2901
BsmI GAATGC 2 cut(s) 1948, 2115
BsnI GGCC 6 cut(s) 195, 1137, 1951, 2439, 2800, 2859
Bso31I GGTCTC 2 cut(s) 972, 1328
BsoBI CYCGRG 2 cut(s) 111, 1550
Bsp1286I GDGCHC 2 cut(s) 1697, 2544
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 4 cut(s) 44, 85, 292, 1963
BspANI GGCC 6 cut(s) 195, 1137, 1951, 2439, 2800, 2859
BspCNI CTCAG 5 cut(s) 586, 1110, 1629, 1653, 1998
BspDI ATCGAT 1 cut(s) 2622
BspFNI CGCG 1 cut(s) 2103
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 2 cut(s) 7, 74
BspMAI CTGCAG 1 cut(s) 2482
BspMI ACCTGC 2 cut(s) 161, 2485
BspPI GGATC 4 cut(s) 67, 80, 342, 1906
BspTI CTTAAG 1 cut(s) 1189
BspTNI GGTCTC 2 cut(s) 972, 1328
BsrI ACTGG 5 cut(s) 380, 1183, 2640, 2949, 2962
BssECI CCNNGG 4 cut(s) 76, 386, 1021, 1417
BssSI CACGAG 1 cut(s) 2724
BssT1I CCWWGG 3 cut(s) 76, 1021, 1417
Bst2BI CACGAG 1 cut(s) 2724
Bst2UI CCWGG 4 cut(s) 945, 2412, 2687, 2934
Bst4CI ACNGT 5 cut(s) 557, 879, 930, 2495, 2762
Bst6I CTCTTC 2 cut(s) 1203, 2623
BstAFI CTTAAG 1 cut(s) 1189
BstAPI GCANNNNNTGC 3 cut(s) 892, 2851, 2970
BstC8I GCNNGC 5 cut(s) 83, 754, 1351, 1967, 2658
BstDEI CTNAG 7 cut(s) 573, 1097, 1637, 1661, 2006, 2081, 2130
BstDSI CCRYGG 1 cut(s) 76
BstEII GGTNACC 1 cut(s) 2068
BstF5I GGATG 7 cut(s) 265, 888, 1391, 1745, 2330, 2560, 2898
BstFNI CGCG 1 cut(s) 2103
BstHHI GCGC 1 cut(s) 436
BstMAI GTCTC 8 cut(s) 936, 972, 1095, 1156, 1328, 1592, 2158, 2901
BstMCI CGRYCG 1 cut(s) 296
BstMWI GCNNNNNNNGC 7 cut(s) 87, 892, 2131, 2519, 2851, 2961, 2970
BstNI CCWGG 4 cut(s) 945, 2412, 2687, 2934
BstNSI RCATGY 1 cut(s) 85
BstPAI GACNNNNGTC 1 cut(s) 964
BstPI GGTNACC 1 cut(s) 2068
BstSCI CCNGG 6 cut(s) 385, 943, 2410, 2685, 2800, 2932
BstSFI CTRYAG 1 cut(s) 2478
BstUI CGCG 1 cut(s) 2103
BstV1I GCAGC 2 cut(s) 58, 262
BstV2I GAAGAC 4 cut(s) 981, 1094, 1679, 2360
BstX2I RGATCY 5 cut(s) 72, 848, 1193, 1375, 1898
BstYI RGATCY 5 cut(s) 72, 848, 1193, 1375, 1898
Bsu15I ATCGAT 1 cut(s) 2622
BsuI GTATCC 1 cut(s) 1194
BsuRI GGCC 6 cut(s) 195, 1137, 1951, 2439, 2800, 2859
BsuTUI ATCGAT 1 cut(s) 2622
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 7 cut(s) 265, 888, 1391, 1745, 2330, 2560, 2898
BtsIMutI CAGTG 3 cut(s) 2231, 2955, 2956
BveI ACCTGC 2 cut(s) 161, 2485
Cac8I GCNNGC 5 cut(s) 83, 754, 1351, 1967, 2658
CaiI CAGNNNCTG 1 cut(s) 275
CciI TCATGA 1 cut(s) 970
CfoI GCGC 1 cut(s) 436
Cfr13I GGNCC 4 cut(s) 383, 1123, 1949, 2798
ClaI ATCGAT 1 cut(s) 2622
Csp6I GTAC 4 cut(s) 2226, 2468, 2531, 2742
CviQI GTAC 4 cut(s) 2226, 2468, 2531, 2742
DdeI CTNAG 7 cut(s) 573, 1097, 1637, 1661, 2006, 2081, 2130
DraI TTTAAA 1 cut(s) 1905
EaeI YGGCCR 1 cut(s) 2437
Eam1104I CTCTTC 2 cut(s) 1203, 2623
EarI CTCTTC 2 cut(s) 1203, 2623
Eco130I CCWWGG 3 cut(s) 76, 1021, 1417
Eco147I AGGCCT 2 cut(s) 1137, 2859
Eco31I GGTCTC 2 cut(s) 972, 1328
Eco47I GGWCC 2 cut(s) 383, 1123
Eco57I CTGAAG 4 cut(s) 2094, 2372, 2636, 2828
Eco88I CYCGRG 2 cut(s) 111, 1550
Eco91I GGTNACC 1 cut(s) 2068
EcoO65I GGTNACC 1 cut(s) 2068
EcoRI GAATTC 1 cut(s) 2573
EcoRII CCWGG 4 cut(s) 943, 2410, 2685, 2932
EcoT14I CCWWGG 3 cut(s) 76, 1021, 1417
EcoT22I ATGCAT 2 cut(s) 888, 2254
ErhI CCWWGG 3 cut(s) 76, 1021, 1417
FalI AAGNNNNNCTT 2 cut(s) 201, 233
FauI CCCGC 1 cut(s) 78
FbaI TGATCA 1 cut(s) 631
FblI GTMKAC 2 cut(s) 958, 2200
Fnu4HI GCNGC 2 cut(s) 47, 276
FokI GGATG 7 cut(s) 272, 895, 1398, 1752, 2337, 2567, 2905
Fsp4HI GCNGC 2 cut(s) 47, 276
FspBI CTAG 4 cut(s) 197, 716, 797, 2204
GlaI GCGC 1 cut(s) 435
GluI GCNGC 2 cut(s) 47, 276
GsaI CCCAGC 1 cut(s) 913
HaeIII GGCC 6 cut(s) 195, 1137, 1951, 2439, 2800, 2859
HapII CCGG 2 cut(s) 386, 2801
HhaI GCGC 1 cut(s) 436
Hin6I GCGC 1 cut(s) 434
HinP1I GCGC 1 cut(s) 434
HincII GTYRAC 1 cut(s) 1041
HindII GTYRAC 1 cut(s) 1041
HindIII AAGCTT 2 cut(s) 1433, 2132
HpaII CCGG 2 cut(s) 386, 2801
HphI GGTGA 4 cut(s) 2036, 2080, 2693, 2824
Hpy166II GTNNAC 6 cut(s) 926, 959, 1041, 1123, 2201, 2468
Hpy188I TCNGA 9 cut(s) 699, 1359, 1662, 1692, 2001, 2182, 2445, 2808, 2835
Hpy8I GTNNAC 6 cut(s) 926, 959, 1041, 1123, 2201, 2468
HpyCH4III ACNGT 5 cut(s) 557, 879, 930, 2495, 2762
HpyCH4IV ACGT 2 cut(s) 952, 1994
HpyF10VI GCNNNNNNNGC 7 cut(s) 87, 892, 2131, 2519, 2851, 2961, 2970
HpyF3I CTNAG 7 cut(s) 573, 1097, 1637, 1661, 2006, 2081, 2130
HpySE526I ACGT 2 cut(s) 952, 1994
HspAI GCGC 1 cut(s) 434
Ksp22I TGATCA 1 cut(s) 631
LmnI GCTCC 2 cut(s) 272, 2030
Lsp1109I GCAGC 2 cut(s) 58, 262
LweI GCATC 7 cut(s) 436, 553, 873, 1730, 2239, 2261, 2315
MaeI CTAG 4 cut(s) 197, 716, 797, 2204
MaeII ACGT 2 cut(s) 952, 1994
MaeIII GTNAC 2 cut(s) 2051, 2068
MfeI CAATTG 2 cut(s) 1626, 2296
MflI RGATCY 5 cut(s) 72, 848, 1193, 1375, 1898
MhlI GDGCHC 2 cut(s) 1697, 2544
MlyI GAGTC 3 cut(s) 1158, 1483, 2835
MmeI TCCRAC 2 cut(s) 891, 1540
Mph1103I ATGCAT 2 cut(s) 888, 2254
MroXI GAANNNNTTC 6 cut(s) 216, 486, 918, 1012, 2357, 2394
MslI CAYNNNNRTG 3 cut(s) 1031, 1881, 2445
MspCI CTTAAG 1 cut(s) 1189
MspI CCGG 2 cut(s) 386, 2801
MspR9I CCNGG 6 cut(s) 387, 945, 2412, 2687, 2802, 2934
MunI CAATTG 2 cut(s) 1626, 2296
Mva1269I GAATGC 2 cut(s) 1948, 2115
MvaI CCWGG 4 cut(s) 945, 2412, 2687, 2934
MvnI CGCG 1 cut(s) 2103
MwoI GCNNNNNNNGC 7 cut(s) 87, 892, 2131, 2519, 2851, 2961, 2970
NciI CCSGG 2 cut(s) 387, 2802
NcoI CCATGG 1 cut(s) 76
NlaIV GGNNCC 2 cut(s) 7, 74
NmeAIII GCCGAG 1 cut(s) 1731
NmuCI GTSAC 1 cut(s) 2068
NsiI ATGCAT 2 cut(s) 888, 2254
NspI RCATGY 1 cut(s) 85
PaeI GCATGC 1 cut(s) 85
PaeR7I CTCGAG 1 cut(s) 111
PagI TCATGA 1 cut(s) 970
PceI AGGCCT 2 cut(s) 1137, 2859
PctI GAATGC 2 cut(s) 1948, 2115
PdmI GAANNNNTTC 6 cut(s) 216, 486, 918, 1012, 2357, 2394
PflMI CCANNNNNTGG 2 cut(s) 1027, 2551
PfoI TCCNGGA 1 cut(s) 2410
PkrI GCNGC 2 cut(s) 48, 277
PleI GAGTC 3 cut(s) 1158, 1482, 2834
PpsI GAGTC 3 cut(s) 1158, 1482, 2834
PshAI GACNNNNGTC 1 cut(s) 964
PshBI ATTAAT 1 cut(s) 1514
Psp6I CCWGG 4 cut(s) 943, 2410, 2685, 2932
PspEI GGTNACC 1 cut(s) 2068
PspFI CCCAGC 1 cut(s) 909
PspGI CCWGG 4 cut(s) 943, 2410, 2685, 2932
PspN4I GGNNCC 2 cut(s) 7, 74
PspPI GGNCC 4 cut(s) 383, 1123, 1949, 2798
PspXI VCTCGAGB 1 cut(s) 111
PstI CTGCAG 1 cut(s) 2482
PstNI CAGNNNCTG 1 cut(s) 275
PsuI RGATCY 5 cut(s) 72, 848, 1193, 1375, 1898
RsaI GTAC 4 cut(s) 2227, 2469, 2532, 2743
RsaNI GTAC 4 cut(s) 2226, 2468, 2531, 2742
RseI CAYNNNNRTG 3 cut(s) 1031, 1881, 2445
SatI GCNGC 2 cut(s) 47, 276
Sau96I GGNCC 4 cut(s) 383, 1123, 1949, 2798
SchI GAGTC 3 cut(s) 1158, 1483, 2835
ScrFI CCNGG 6 cut(s) 387, 945, 2412, 2687, 2802, 2934
SduI GDGCHC 2 cut(s) 1697, 2544
SfaNI GCATC 7 cut(s) 436, 553, 873, 1730, 2239, 2261, 2315
SfcI CTRYAG 1 cut(s) 2478
Sfr274I CTCGAG 1 cut(s) 111
SinI GGWCC 2 cut(s) 383, 1123
SlaI CTCGAG 1 cut(s) 111
SmiMI CAYNNNNRTG 3 cut(s) 1031, 1881, 2445
SmlI CTYRAG 6 cut(s) 111, 1159, 1189, 1469, 2135, 2774
SmoI CTYRAG 6 cut(s) 111, 1159, 1189, 1469, 2135, 2774
SphI GCATGC 1 cut(s) 85
SseBI AGGCCT 2 cut(s) 1137, 2859
SsiI CCGC 4 cut(s) 44, 85, 292, 1963
SspI AATATT 3 cut(s) 738, 1327, 2422
SspMI CTAG 4 cut(s) 197, 716, 797, 2204
StuI AGGCCT 2 cut(s) 1137, 2859
StyD4I CCNGG 6 cut(s) 385, 943, 2410, 2685, 2800, 2932
StyI CCWWGG 3 cut(s) 76, 1021, 1417
TaaI ACNGT 5 cut(s) 557, 879, 930, 2495, 2762
TaiI ACGT 2 cut(s) 955, 1997
TaqI TCGA 5 cut(s) 112, 1170, 1955, 2119, 2622
TaqII GACCGA 1 cut(s) 162
TatI WGTACW 2 cut(s) 2225, 2530
TscAI CASTG 3 cut(s) 2238, 2956, 2962
TseFI GTSAC 1 cut(s) 2068
TseI GCWGC 2 cut(s) 46, 275
Tsp45I GTSAC 1 cut(s) 2068
TspGWI ACGGA 4 cut(s) 573, 1673, 2525, 2819
TspRI CASTG 3 cut(s) 2238, 2956, 2962
Van91I CCANNNNNTGG 2 cut(s) 1027, 2551
Vha464I CTTAAG 1 cut(s) 1189
VpaK11BI GGWCC 2 cut(s) 383, 1123
VspI ATTAAT 1 cut(s) 1514
XceI RCATGY 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 3 cut(s) 232, 1415, 2447
XhoI CTCGAG 1 cut(s) 111
XmiI GTMKAC 2 cut(s) 958, 2200
XmnI GAANNNNTTC 6 cut(s) 216, 486, 918, 1012, 2357, 2394
XspI CTAG 4 cut(s) 197, 716, 797, 2204
Zsp2I ATGCAT 2 cut(s) 888, 2254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.