Rmu_sc0001932.1_g000023

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001932.1
OG0000105
Physical Location & Seq
Forward (+)
95978 .. 97580
1603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001932.1_g000023.1.cds

Sequence Viewer

Length: 1047 bp
atgtctcgggtattacaaaacaacttcgaagaaaaaatctctttctgccatgttcaagcaaacttccttcccgatgccattgcaaacactgcacacgtgaagttcgggctaacagagatggcgtcaacctcttctcgtcgtcaatggaaatacgacgtgtttataagtttcagcggggaagatacccgcaatacttttaccagttttctgtattctgcactaaatctgagaggaattctcacctttctggatgaccgagagcttgagaaaggaaaatccattagctctgaacttttagctgcaattgagcagtctagatctgcgattgtcattctctcacccaactatgctcgttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagacatgggccaacaagtcctccccgtcttctacgacgtggatccttctgatgtgcggcaccaaaggggacattttgagctcaaaaggaaaacccaagtagatgtcgaagtaagggaacatgaagaagtttatggcaagaatgatgaggacagactaagtgcgtggagagctgctttgactgaagtcgccaatctttctggctgggatttcaagaattattcggtgcgttttatagggatccatggcatgcggggcattggtaagacaacacttgctcgagctatccatgatcaaattcgccaggattttgaccgagcctactttctttccaatgttagagaaatgtctaaaaacaatggcctagtttctcttcaagaaaaacttctttccgaaatcctaatggcaaaaattaaaaatatagagcatgaagacacaggagctgctatgatagaaaggcggttgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgagacaattagagaaattggctggaagtcgcaactggtttggtccagggagtagaatcatcataaccaccacagatattcagttgttaaaggtattgaatattggctttaatttgatttgtggacaaaatcaaatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

348

Amino Acids

39.84

Weight (kDa)

7.09

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 164
AccB1I GGYRCC 1 cut(s) 459
AciI CCGC 5 cut(s) 174, 187, 457, 652, 859
AclWI GGATC 5 cut(s) 437, 450, 634, 647, 909
AcsI RAATTY 2 cut(s) 234, 696
AcuI CTGAAG 1 cut(s) 603
AcvI CACGTG 1 cut(s) 97
AcyI GRCGYC 1 cut(s) 122
AflIII ACRYGT 2 cut(s) 94, 156
AgsI TTSAA 5 cut(s) 56, 392, 613, 776, 1006
AjiI CACGTC 2 cut(s) 157, 439
AjnI CCWGG 2 cut(s) 702, 952
AluBI AGCT 7 cut(s) 262, 285, 299, 481, 572, 683, 842
AluI AGCT 7 cut(s) 262, 285, 299, 481, 572, 683, 842
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 2 cut(s) 9, 904
AlwI GGATC 5 cut(s) 437, 450, 634, 647, 909
AlwNI CAGNNNCTG 1 cut(s) 842
Ama87I CYCGRG 2 cut(s) 6, 678
AoxI GGCC 2 cut(s) 409, 760
ApeKI GCWGC 3 cut(s) 299, 572, 842
ApoI RAATTY 2 cut(s) 234, 696
Asp700I GAANNNNTTC 1 cut(s) 783
AspS9I GGNCC 2 cut(s) 409, 950
AsuHPI GGTGA 2 cut(s) 232, 330
AsuII TTCGAA 1 cut(s) 27
AvaI CYCGRG 2 cut(s) 6, 678
AvaII GGWCC 1 cut(s) 950
BamHI GGATCC 2 cut(s) 442, 639
BanI GGYRCC 1 cut(s) 459
BanII GRGCYC 1 cut(s) 483
BbrPI CACGTG 1 cut(s) 97
BbsI GAAGAC 2 cut(s) 421, 837
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 3 cut(s) 286, 559, 829
BccI CCATC 1 cut(s) 112
BcgI CGANNNNNNTGC 2 cut(s) 62, 96
BciT130I CCWGG 2 cut(s) 704, 954
BclI TGATCA 1 cut(s) 691
BcoDI GTCTC 2 cut(s) 9, 904
BfaI CTAG 2 cut(s) 315, 764
BglII AGATCT 1 cut(s) 317
BisI GCNGC 4 cut(s) 300, 458, 573, 843
BlsI GCNGC 4 cut(s) 301, 459, 574, 844
Bme1390I CCNGG 2 cut(s) 704, 954
Bme18I GGWCC 1 cut(s) 950
BmeT110I CYCGRG 2 cut(s) 6, 678
BmgBI CACGTC 2 cut(s) 157, 439
BmgT120I GGNCC 2 cut(s) 409, 950
BmiI GGNNCC 3 cut(s) 444, 461, 641
BmrFI CCNGG 2 cut(s) 704, 954
BmsI GCATC 1 cut(s) 64
BoxI GACNNNNGTC 1 cut(s) 584
BpiI GAAGAC 2 cut(s) 421, 837
BplI GAGNNNNNCTC 2 cut(s) 222, 254
Bpu14I TTCGAA 1 cut(s) 27
BpuEI CTTGAG 1 cut(s) 284
BsaAI YACGTR 1 cut(s) 97
BsaBI GATNNNNATC 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 122
BsaJI CCNNGG 2 cut(s) 643, 953
BsaXI ACNNNNNCTCC 2 cut(s) 405, 435
Bse1I ACTGG 2 cut(s) 201, 947
Bse3DI GCAATG 1 cut(s) 78
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 2 cut(s) 704, 954
BseDI CCNNGG 2 cut(s) 643, 953
BseGI GGATG 2 cut(s) 256, 376
BseJI GATNNNNATC 1 cut(s) 900
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 1 cut(s) 218
BseNI ACTGG 2 cut(s) 201, 947
BseXI GCAGC 3 cut(s) 286, 559, 829
BseYI CCCAGC 1 cut(s) 603
BsgI GTGCAG 2 cut(s) 75, 201
BshFI GGCC 2 cut(s) 411, 762
BshNI GGYRCC 1 cut(s) 459
BsiHKAI GWGCWC 1 cut(s) 483
BsiHKCI CYCGRG 2 cut(s) 6, 678
BslFI GGGAC 1 cut(s) 483
BsmAI GTCTC 2 cut(s) 9, 904
BsmFI GGGAC 1 cut(s) 483
BsnI GGCC 2 cut(s) 411, 762
BsoBI CYCGRG 2 cut(s) 6, 678
Bsp119I TTCGAA 1 cut(s) 27
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 5 cut(s) 317, 442, 639, 691, 901
Bsp19I CCATGG 1 cut(s) 643
BspACI CCGC 5 cut(s) 174, 187, 457, 652, 859
BspANI GGCC 2 cut(s) 411, 762
BspCNI CTCAG 1 cut(s) 219
BspLI GGNNCC 3 cut(s) 444, 461, 641
BspPI GGATC 5 cut(s) 437, 450, 634, 647, 909
BspT104I TTCGAA 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 459
BsrDI GCAATG 1 cut(s) 78
BsrI ACTGG 2 cut(s) 201, 947
BssECI CCNNGG 2 cut(s) 643, 953
BssMI GATC 5 cut(s) 317, 442, 639, 691, 901
BssNI GRCGYC 1 cut(s) 122
BssT1I CCWWGG 1 cut(s) 643
Bst2UI CCWGG 2 cut(s) 704, 954
Bst6I CTCTTC 2 cut(s) 136, 777
BstACI GRCGYC 1 cut(s) 122
BstAPI GCANNNNNTGC 1 cut(s) 89
BstBAI YACGTR 1 cut(s) 97
BstBI TTCGAA 1 cut(s) 27
BstC8I GCNNGC 1 cut(s) 650
BstDEI CTNAG 2 cut(s) 227, 557
BstDSI CCRYGG 1 cut(s) 643
BstF5I GGATG 2 cut(s) 256, 376
BstKTI GATC 5 cut(s) 320, 445, 642, 694, 904
BstMAI GTCTC 2 cut(s) 9, 904
BstMBI GATC 5 cut(s) 317, 442, 639, 691, 901
BstMWI GCNNNNNNNGC 3 cut(s) 89, 569, 654
BstNI CCWGG 2 cut(s) 704, 954
BstNSI RCATGY 1 cut(s) 652
BstPAI GACNNNNGTC 1 cut(s) 584
BstSCI CCNGG 2 cut(s) 702, 952
BstV1I GCAGC 3 cut(s) 286, 559, 829
BstV2I GAAGAC 2 cut(s) 421, 837
BstX2I RGATCY 3 cut(s) 317, 442, 639
BstYI RGATCY 3 cut(s) 317, 442, 639
BsuRI GGCC 2 cut(s) 411, 762
BtgI CCRYGG 1 cut(s) 643
BtrI CACGTC 2 cut(s) 157, 439
BtsCI GGATG 2 cut(s) 256, 376
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 650
CaiI CAGNNNCTG 1 cut(s) 842
Cfr13I GGNCC 2 cut(s) 409, 950
CseI GACGC 1 cut(s) 111
CviAII CATG 9 cut(s) 50, 360, 397, 406, 521, 644, 649, 689, 827
DdeI CTNAG 2 cut(s) 227, 557
DpnI GATC 5 cut(s) 319, 444, 641, 693, 903
DpnII GATC 5 cut(s) 317, 442, 639, 691, 901
Eam1104I CTCTTC 2 cut(s) 136, 777
EarI CTCTTC 2 cut(s) 136, 777
Ecl136II GAGCTC 1 cut(s) 481
Eco130I CCWWGG 1 cut(s) 643
Eco24I GRGCYC 1 cut(s) 483
Eco47I GGWCC 1 cut(s) 950
Eco53kI GAGCTC 1 cut(s) 481
Eco57I CTGAAG 1 cut(s) 603
Eco72I CACGTG 1 cut(s) 97
Eco88I CYCGRG 2 cut(s) 6, 678
EcoICRI GAGCTC 1 cut(s) 481
EcoRI GAATTC 1 cut(s) 234
EcoRII CCWGG 2 cut(s) 702, 952
EcoT14I CCWWGG 1 cut(s) 643
EcoT22I ATGCAT 1 cut(s) 398
EcoT38I GRGCYC 1 cut(s) 483
ErhI CCWWGG 1 cut(s) 643
FaeI CATG 9 cut(s) 53, 363, 400, 409, 524, 647, 652, 692, 830
FalI AAGNNNNNCTT 2 cut(s) 768, 800
FaqI GGGAC 1 cut(s) 483
FatI CATG 9 cut(s) 49, 359, 396, 405, 520, 643, 648, 688, 826
FauI CCCGC 3 cut(s) 167, 194, 645
FbaI TGATCA 1 cut(s) 691
Fnu4HI GCNGC 4 cut(s) 300, 458, 573, 843
FokI GGATG 2 cut(s) 263, 383
FriOI GRGCYC 1 cut(s) 483
Fsp4HI GCNGC 4 cut(s) 300, 458, 573, 843
FspBI CTAG 2 cut(s) 315, 764
GluI GCNGC 4 cut(s) 300, 458, 573, 843
GsaI CCCAGC 1 cut(s) 607
HaeIII GGCC 2 cut(s) 411, 762
HgaI GACGC 1 cut(s) 111
Hin1I GRCGYC 1 cut(s) 122
Hin1II CATG 9 cut(s) 53, 363, 400, 409, 524, 647, 652, 692, 830
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HinfI GANTC 1 cut(s) 963
HphI GGTGA 2 cut(s) 232, 330
Hpy166II GTNNAC 2 cut(s) 126, 1031
Hpy188I TCNGA 4 cut(s) 228, 289, 451, 793
Hpy188III TCNNGA 6 cut(s) 71, 248, 315, 382, 613, 776
Hpy8I GTNNAC 2 cut(s) 126, 1031
Hpy99I CGWCG 3 cut(s) 141, 158, 440
HpyAV CCTTC 2 cut(s) 77, 456
HpyCH4IV ACGT 3 cut(s) 96, 156, 438
HpyCH4V TGCA 5 cut(s) 83, 92, 218, 302, 396
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 569, 654
HpyF3I CTNAG 2 cut(s) 227, 557
HpySE526I ACGT 3 cut(s) 96, 156, 438
Hsp92I GRCGYC 1 cut(s) 122
Hsp92II CATG 9 cut(s) 53, 363, 400, 409, 524, 647, 652, 692, 830
Ksp22I TGATCA 1 cut(s) 691
Kzo9I GATC 5 cut(s) 317, 442, 639, 691, 901
LmnI GCTCC 1 cut(s) 839
Lsp1109I GCAGC 3 cut(s) 286, 559, 829
LweI GCATC 1 cut(s) 64
MaeI CTAG 2 cut(s) 315, 764
MaeII ACGT 3 cut(s) 96, 156, 438
MalI GATC 5 cut(s) 319, 444, 641, 693, 903
MboI GATC 5 cut(s) 317, 442, 639, 691, 901
MboII GAAGA 7 cut(s) 41, 123, 191, 421, 536, 764, 842
MfeI CAATTG 1 cut(s) 303
MflI RGATCY 3 cut(s) 317, 442, 639
MhlI GDGCHC 1 cut(s) 483
MluCI AATT 8 cut(s) 234, 303, 616, 696, 810, 914, 923, 1018
MnlI CCTC 4 cut(s) 139, 224, 431, 541
Mph1103I ATGCAT 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 783
MseI TTAA 3 cut(s) 813, 995, 1017
MspA1I CMGCKG 1 cut(s) 174
MspR9I CCNGG 2 cut(s) 704, 954
MunI CAATTG 1 cut(s) 303
MvaI CCWGG 2 cut(s) 704, 954
MwoI GCNNNNNNNGC 3 cut(s) 89, 569, 654
NcoI CCATGG 1 cut(s) 643
NdeII GATC 5 cut(s) 317, 442, 639, 691, 901
NlaIII CATG 9 cut(s) 53, 363, 400, 409, 524, 647, 652, 692, 830
NlaIV GGNNCC 3 cut(s) 444, 461, 641
NsiI ATGCAT 1 cut(s) 398
NspI RCATGY 1 cut(s) 652
NspV TTCGAA 1 cut(s) 27
PaeI GCATGC 1 cut(s) 652
PaeR7I CTCGAG 1 cut(s) 678
PdmI GAANNNNTTC 1 cut(s) 783
PfeI GAWTC 1 cut(s) 963
PkrI GCNGC 4 cut(s) 301, 459, 574, 844
PmaCI CACGTG 1 cut(s) 97
PmlI CACGTG 1 cut(s) 97
Ppu21I YACGTR 1 cut(s) 97
PshAI GACNNNNGTC 1 cut(s) 584
PsiI TTATAA 1 cut(s) 164
Psp124BI GAGCTC 1 cut(s) 483
Psp6I CCWGG 2 cut(s) 702, 952
PspCI CACGTG 1 cut(s) 97
PspFI CCCAGC 1 cut(s) 603
PspGI CCWGG 2 cut(s) 702, 952
PspN4I GGNNCC 3 cut(s) 444, 461, 641
PspPI GGNCC 2 cut(s) 409, 950
PspXI VCTCGAGB 1 cut(s) 678
PstNI CAGNNNCTG 1 cut(s) 842
PsuI RGATCY 3 cut(s) 317, 442, 639
SacI GAGCTC 1 cut(s) 483
SaqAI TTAA 3 cut(s) 813, 995, 1017
SatI GCNGC 4 cut(s) 300, 458, 573, 843
Sau3AI GATC 5 cut(s) 317, 442, 639, 691, 901
Sau96I GGNCC 2 cut(s) 409, 950
ScrFI CCNGG 2 cut(s) 704, 954
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 1 cut(s) 64
Sfr274I CTCGAG 1 cut(s) 678
SfuI TTCGAA 1 cut(s) 27
SinI GGWCC 1 cut(s) 950
SlaI CTCGAG 1 cut(s) 678
SmlI CTYRAG 2 cut(s) 263, 678
SmoI CTYRAG 2 cut(s) 263, 678
SphI GCATGC 1 cut(s) 652
Sse9I AATT 8 cut(s) 234, 303, 616, 696, 810, 914, 923, 1018
SsiI CCGC 5 cut(s) 174, 187, 457, 652, 859
SspI AATATT 1 cut(s) 1009
SspMI CTAG 2 cut(s) 315, 764
SstI GAGCTC 1 cut(s) 483
StyD4I CCNGG 2 cut(s) 702, 952
StyI CCWWGG 1 cut(s) 643
TaiI ACGT 3 cut(s) 99, 159, 441
TaqI TCGA 3 cut(s) 27, 507, 679
TaqII GACCGA 2 cut(s) 270, 729
TasI AATT 8 cut(s) 234, 303, 616, 696, 810, 914, 923, 1018
TauI GCSGC 1 cut(s) 460
TfiI GAWTC 1 cut(s) 963
Tru1I TTAA 3 cut(s) 813, 995, 1017
Tru9I TTAA 3 cut(s) 813, 995, 1017
TscAI CASTG 1 cut(s) 94
TseI GCWGC 3 cut(s) 299, 572, 842
TspDTI ATGAA 4 cut(s) 387, 413, 537, 843
TspRI CASTG 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 950
XapI RAATTY 2 cut(s) 234, 696
XbaI TCTAGA 1 cut(s) 314
XceI RCATGY 1 cut(s) 652
XhoI CTCGAG 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 2 cut(s) 315, 764
Zsp2I ATGCAT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.