Rmu_sc0000252.1_g000029

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000252.1
OG0000105
Physical Location & Seq
Forward (+)
141156 .. 146223
5068 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000252.1_g000029.1.cds

Sequence Viewer

Length: 3438 bp
atggcgtcaacctcttctcgtcatcaatggaaatacgatgtgtttctaagtttcaggggggaagatacccgctggtcttttaccgatcttctgtattctgcactaaatcagagaggaattctcacctttcgggatgacccagagcttgagaaaggaaaatccattaggcctgaacttttagctgcaattgaggactctagatctgccattgtcattctctcatggaactatggttcttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagagatgggccaacaagtcctccccgtcttctactgggtggatccttctgatgtgcggcaccaaaggggatggtttgagctcaaaaggaaaccccaagtagatgtggaagtaagggaacatgaagaagtttatggcaagaatgaggacagactaaattcctggagagctgctttgactgaggtcgccaatctttctggctggaattttacgcgtggatctcttacagaactaattgacgaaattgttaatcatatactaaagaagtccgtgtatacatcttcaagtgttgacaagggcttaataggaatggattcccgcattgatgatatatcaagcaatttcatatatccgcagcttggtggggtggtgcgctttatagggaaccatggcatgcgggacgatacagaaaaggaccttctctctcagcaatcaatcccagcgattacaaagcctccccggagcaaaccctcaaccttgttgaaacccggtgaccgcccgccagtcctagtctcctcgcgagccgactgtcagcctcaccagatcaacccggcgaccgcacttccagccccagtctccccaggagccgactgcaagcacaaccgccactgttacttccagcgaagcaaggcgcttgaagaagaagtcaggtcacgggactaccccaacgactgcaccccgcggtgctggcacgcctgcgcaaccacaagctcaaaagagactgtttgcacaccagctgggtatgctcagggacttccgttggcggttgtggttttaggttcttttctatttggtagaagcattgatgaatgggcaagtgcaatagataggctaaagaacacaccacataaacgcattattgaggtgcttcggattagttttgatggactggatgaaaaagaccaggaaatattcctacatatcgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactagactattgccagctaaaccctgtcattggtttaagacttctttctgatagatctctcataactatctccaacaatgaagtgtggatgcatgatttgctacaagaattgggctgggaaattgttcgtgaacagtctcctacagaaccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtcatgaagagacataagggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctgattggaagccagaagccttttcaaatttgtctcaacttagtcttctccatattcgtaatgtggaccttcccaaaggcctcacctgtctttctaattccttgagactcctcgaatggactgggtatgccttcagatatctcccacaaaattttgaagcagatgaactaattgaacttaacttgtgccacagcagcattaaacagctttggaagggaacaaagaattttgacaagttgaagttcatcaaactctgccattctcaaaacattgtggagaccccagacctcgcaggggttcagaatcttgagagtttagatcttgaaggatgtgagaatttggtaagagtccatcaatcccttggatttcttaaaaagcttattgtcctgaatcttaaagactgcaaaagtctcgagagtctgccaagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagaaaattccccagtttgttggaaatatggaacgcttgtcggtgctttatcttgatgagactgccattgagaaactgcctgtgtcaattgaacggctgagtggccttgtgtcattgaatctgagcaactgcaaaaatcttgtctgtcttccgagcaccatcaataaattgaagtctattagaaatcttaatctttctggatgcttgaaacttggcaaacatcaggtaaatgtgggggagatggactgttttgaggaaaatgatgtgaatagtgggtctgcaatagaaatgtcatctacccatgatctcctaaaatatgtgagaggttcagtcgttcgtggatgcgaagtagtttggggatctgtaaataagttcttgccttctggattggtgcaaaaagtgaatacagagccaatgagtttccacttgcctatatctggtctgtgtaattcaacatatctgaacctgagtaattgcaatcttggtgaaggagcatttgccaacgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgtcttccttctggcattagattgctttctaagcttgagaacttcaacttggagaattgcaatagacttcaagagttgtcagaccttccatcaaatagtatactagatttaaaggcagatggttgtacttcactgaaatacctgtttgatgcatcaaatttgaacggattaaacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatcaaggatgcaataacatagcatttgaaatgctgaagacattcatgtatcagggaatctctaacaagagggaaacttttcatatggtaattccaggaagtaatattcctgagtggttcagccatcggagtgttgggtgttcattaagtatgggacctgcatgcttagatgaagttttgggatttgctttgtgtgctgtttttgtactccatgagcaccatccagtggataagctttatatggatgaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagttcaatggaatagaattggaagtatatggcacacagcctgcatttcgctttagtgaagaattttgccaggttgaatcagatcacctgtggctattctatgtatctagtgataagtactttggtacagagaggtggggtaactgttacggtcagtttgagttcttatttgaaaccagagggccgggtctgaaggtgaaggagtgtggagtccgtctgatatatgaggaagatgtgcaagcgttgaaccaaacaaccactcaatcaagcagcaggatgtctccttatgaggatatattgattggttttgacattccagttgcaggggaaaccagtgccactggtagcagaacttgcacgcttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1145

Amino Acids

129.47

Weight (kDa)

5.91

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 2938
AccB1I GGYRCC 1 cut(s) 342
AccB7I CCANNNNNTGG 2 cut(s) 1483, 2998
AccI GTMKAC 2 cut(s) 557, 2656
AccII CGCG 3 cut(s) 496, 802, 964
AclWI GGATC 5 cut(s) 320, 333, 508, 1242, 2362
AcuI CTGAAG 4 cut(s) 1630, 2828, 3083, 3275
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 2683, 2979, 3182, 3190
AfiI CCNNNNNNNGG 7 cut(s) 641, 1280, 1483, 1807, 2432, 2998, 3386
AflIII ACRYGT 1 cut(s) 494
AjnI CCWGG 6 cut(s) 443, 862, 1185, 1399, 2866, 3132
AjuI GAANNNNNNNTTGG 2 cut(s) 2588, 2620
AloI GAACNNNNNNTCC 2 cut(s) 217, 249
Alw21I GWGCWC 3 cut(s) 366, 2153, 2991
AlwI GGATC 5 cut(s) 320, 333, 508, 1242, 2362
Ama87I CYCGRG 1 cut(s) 1925
AoxI GGCC 5 cut(s) 167, 292, 1591, 2098, 3245
ApeKI GCWGC 5 cut(s) 182, 452, 637, 1707, 3333
ArsI GACNNNNNNTTYG 2 cut(s) 2121, 2153
AseI ATTAAT 1 cut(s) 1970
Asp700I GAANNNNTTC 5 cut(s) 595, 1374, 1468, 2813, 2850
AspLEI GCGC 3 cut(s) 657, 916, 983
AspS9I GGNCC 5 cut(s) 292, 697, 1579, 2927, 3245
AsuC2I CCSGG 4 cut(s) 742, 771, 833, 3249
AsuHPI GGTGA 8 cut(s) 115, 785, 812, 1588, 2492, 2536, 3140, 3271
AvaI CYCGRG 1 cut(s) 1925
AvaII GGWCC 3 cut(s) 697, 1579, 2927
BamHI GGATCC 1 cut(s) 325
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 366
BbsI GAAGAC 6 cut(s) 304, 1437, 1550, 2135, 2552, 2816
Bbv12I GWGCWC 3 cut(s) 366, 2153, 2991
BbvI GCAGC 5 cut(s) 169, 439, 649, 1719, 3345
BceAI ACGGC 1 cut(s) 2105
BcgI CGANNNNNNTGC 2 cut(s) 1906, 1940
BciT130I CCWGG 6 cut(s) 445, 864, 1187, 1401, 2868, 3134
BcnI CCSGG 4 cut(s) 742, 771, 833, 3249
BfaI CTAG 5 cut(s) 198, 791, 1253, 2660, 3171
BfmI CTRYAG 1 cut(s) 1392
BfoI RGCGCY 1 cut(s) 917
BfuAI ACCTGC 1 cut(s) 2938
BglII AGATCT 3 cut(s) 200, 1304, 1831
BisI GCNGC 6 cut(s) 183, 341, 453, 638, 1708, 3334
BlsI GCNGC 6 cut(s) 184, 342, 454, 639, 1709, 3335
BmcAI AGTACT 1 cut(s) 3182
Bme18I GGWCC 3 cut(s) 697, 1579, 2927
BmeT110I CYCGRG 1 cut(s) 1925
BmgT120I GGNCC 5 cut(s) 292, 697, 1579, 2927, 3245
BmiI GGNNCC 5 cut(s) 327, 344, 668, 868, 2928
BmrI ACTGGG 4 cut(s) 328, 848, 1644, 2002
BmsI GCATC 6 cut(s) 1329, 2186, 2327, 2695, 2717, 2771
BmuI ACTGGG 4 cut(s) 328, 848, 1644, 2002
BoxI GACNNNNGTC 1 cut(s) 464
BpiI GAAGAC 6 cut(s) 304, 1437, 1550, 2135, 2552, 2816
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 1 cut(s) 466
Bpu10I CCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 4 cut(s) 167, 1636, 1841, 2612
BpuMI CCSGG 4 cut(s) 742, 771, 833, 3249
BsaBI GATNNNNATC 1 cut(s) 1233
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1428, 1784
BsaJI CCNNGG 6 cut(s) 670, 740, 862, 962, 1477, 1873
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 721, 751
Bsc4I CCNNNNNNNGG 7 cut(s) 641, 1280, 1483, 1807, 2432, 2998, 3386
Bse8I GATNNNNATC 1 cut(s) 1233
BseBI CCWGG 6 cut(s) 445, 864, 1187, 1401, 2868, 3134
BseDI CCNNGG 6 cut(s) 670, 740, 862, 962, 1477, 1873
BseJI GATNNNNATC 1 cut(s) 1233
BseLI CCNNNNNNNGG 7 cut(s) 641, 1280, 1483, 1807, 2432, 2998, 3386
BseMII CTCAG 7 cut(s) 453, 722, 1043, 2084, 2108, 2453, 2874
BseRI GAGGAG 2 cut(s) 787, 1613
BseXI GCAGC 5 cut(s) 169, 439, 649, 1719, 3345
BseYI CCCAGC 3 cut(s) 721, 1019, 1365
BsgI GTGCAG 2 cut(s) 84, 940
Bsh1236I CGCG 3 cut(s) 496, 802, 964
Bsh1285I CGRYCG 1 cut(s) 840
BshFI GGCC 5 cut(s) 169, 294, 1593, 2100, 3247
BshNI GGYRCC 1 cut(s) 342
BsiEI CGRYCG 1 cut(s) 840
BsiHKAI GWGCWC 3 cut(s) 366, 2153, 2991
BsiHKCI CYCGRG 1 cut(s) 1925
BsiSI CCGG 4 cut(s) 742, 771, 833, 3248
BslFI GGGAC 4 cut(s) 695, 953, 1047, 2940
BslI CCNNNNNNNGG 7 cut(s) 641, 1280, 1483, 1807, 2432, 2998, 3386
BsmFI GGGAC 4 cut(s) 695, 953, 1047, 2940
BsnI GGCC 5 cut(s) 169, 294, 1593, 2100, 3247
Bso31I GGTCTC 2 cut(s) 1428, 1784
BsoBI CYCGRG 1 cut(s) 1925
Bsp1286I GDGCHC 3 cut(s) 366, 2153, 2991
Bsp19I CCATGG 1 cut(s) 670
Bsp68I TCGCGA 1 cut(s) 802
BspANI GGCC 5 cut(s) 169, 294, 1593, 2100, 3247
BspCNI CTCAG 7 cut(s) 454, 721, 1042, 2085, 2109, 2454, 2875
BspFNI CGCG 3 cut(s) 496, 802, 964
BspHI TCATGA 2 cut(s) 1426, 1446
BspLI GGNNCC 5 cut(s) 327, 344, 668, 868, 2928
BspMI ACCTGC 1 cut(s) 2938
BspPI GGATC 5 cut(s) 320, 333, 508, 1242, 2362
BspT107I GGYRCC 1 cut(s) 342
BspTNI GGTCTC 2 cut(s) 1428, 1784
BssECI CCNNGG 6 cut(s) 670, 740, 862, 962, 1477, 1873
BssNAI GTATAC 2 cut(s) 558, 2657
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 3 cut(s) 670, 1477, 1873
Bst1107I GTATAC 2 cut(s) 558, 2657
Bst2UI CCWGG 6 cut(s) 445, 864, 1187, 1401, 2868, 3134
Bst4CI ACNGT 7 cut(s) 812, 893, 1006, 1386, 2243, 3209, 3215
Bst6I CTCTTC 2 cut(s) 19, 1445
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 1348, 3417
BstDSI CCRYGG 2 cut(s) 670, 962
BstEII GGTNACC 2 cut(s) 773, 2524
BstFNI CGCG 3 cut(s) 496, 802, 964
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 3 cut(s) 657, 916, 983
BstMCI CGRYCG 1 cut(s) 840
BstMWI GCNNNNNNNGC 8 cut(s) 848, 970, 1025, 1348, 1707, 2587, 2966, 3417
BstNI CCWGG 6 cut(s) 445, 864, 1187, 1401, 2868, 3134
BstNSI RCATGY 2 cut(s) 679, 2937
BstPAI GACNNNNGTC 1 cut(s) 464
BstPI GGTNACC 2 cut(s) 773, 2524
BstSFI CTRYAG 1 cut(s) 1392
BstUI CGCG 3 cut(s) 496, 802, 964
BstV1I GCAGC 5 cut(s) 169, 439, 649, 1719, 3345
BstV2I GAAGAC 6 cut(s) 304, 1437, 1550, 2135, 2552, 2816
BstX2I RGATCY 6 cut(s) 200, 325, 500, 1304, 1831, 2354
BstXI CCANNNNNNTGG 1 cut(s) 2015
BstYI RGATCY 6 cut(s) 200, 325, 500, 1304, 1831, 2354
BstZ17I GTATAC 2 cut(s) 558, 2657
BsuRI GGCC 5 cut(s) 169, 294, 1593, 2100, 3247
BtgI CCRYGG 2 cut(s) 670, 962
BtsIMutI CAGTG 5 cut(s) 889, 2687, 3003, 3402, 3403
BtuMI TCGCGA 1 cut(s) 802
BveI ACCTGC 1 cut(s) 2938
CciI TCATGA 2 cut(s) 1426, 1446
CfoI GCGC 3 cut(s) 657, 916, 983
Cfr13I GGNCC 5 cut(s) 292, 697, 1579, 2927, 3245
Cfr42I CCGCGG 1 cut(s) 965
Csp6I GTAC 4 cut(s) 2682, 2978, 3181, 3189
CviQI GTAC 4 cut(s) 2682, 2978, 3181, 3189
DraI TTTAAA 1 cut(s) 2667
Eam1104I CTCTTC 2 cut(s) 19, 1445
EarI CTCTTC 2 cut(s) 19, 1445
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 3 cut(s) 670, 1477, 1873
Eco147I AGGCCT 2 cut(s) 169, 1593
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 2 cut(s) 1428, 1784
Eco32I GATATC 1 cut(s) 1652
Eco47I GGWCC 3 cut(s) 697, 1579, 2927
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 4 cut(s) 1630, 2828, 3083, 3275
Eco88I CYCGRG 1 cut(s) 1925
Eco91I GGTNACC 2 cut(s) 773, 2524
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 2 cut(s) 697, 2927
EcoO65I GGTNACC 2 cut(s) 773, 2524
EcoRI GAATTC 2 cut(s) 117, 3020
EcoRII CCWGG 6 cut(s) 443, 862, 1185, 1399, 2866, 3132
EcoRV GATATC 1 cut(s) 1652
EcoT14I CCWWGG 3 cut(s) 670, 1477, 1873
EcoT22I ATGCAT 3 cut(s) 281, 1344, 2710
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 3 cut(s) 670, 1477, 1873
FaqI GGGAC 4 cut(s) 695, 953, 1047, 2940
FauI CCCGC 5 cut(s) 77, 608, 672, 789, 969
FauNDI CATATG 1 cut(s) 2856
FblI GTMKAC 2 cut(s) 557, 2656
Fnu4HI GCNGC 6 cut(s) 183, 341, 453, 638, 1708, 3334
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 6 cut(s) 183, 341, 453, 638, 1708, 3334
FspBI CTAG 5 cut(s) 198, 791, 1253, 2660, 3171
FspI TGCGCA 1 cut(s) 982
GlaI GCGC 3 cut(s) 656, 915, 982
GluI GCNGC 6 cut(s) 183, 341, 453, 638, 1708, 3334
GsaI CCCAGC 3 cut(s) 725, 1023, 1369
GsuI CTGGAG 1 cut(s) 466
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 5 cut(s) 169, 294, 1593, 2100, 3247
HapII CCGG 4 cut(s) 742, 771, 833, 3248
HhaI GCGC 3 cut(s) 657, 916, 983
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 655, 914, 981
HinP1I GCGC 3 cut(s) 655, 914, 981
HincII GTYRAC 3 cut(s) 9, 574, 1497
HindII GTYRAC 3 cut(s) 9, 574, 1497
HindIII AAGCTT 3 cut(s) 1889, 2588, 3005
HpaII CCGG 4 cut(s) 742, 771, 833, 3248
HphI GGTGA 8 cut(s) 115, 785, 812, 1588, 2492, 2536, 3140, 3271
Hpy166II GTNNAC 7 cut(s) 9, 558, 574, 1382, 1497, 1579, 2657
Hpy8I GTNNAC 7 cut(s) 9, 558, 574, 1382, 1497, 1579, 2657
HpyCH4III ACNGT 7 cut(s) 812, 893, 1006, 1386, 2243, 3209, 3215
HpyCH4IV ACGT 1 cut(s) 1408
HpyF10VI GCNNNNNNNGC 8 cut(s) 848, 970, 1025, 1348, 1707, 2587, 2966, 3417
HpySE526I ACGT 1 cut(s) 1408
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 655, 914, 981
KspI CCGCGG 1 cut(s) 965
LmnI GCTCC 3 cut(s) 744, 866, 2486
Lsp1109I GCAGC 5 cut(s) 169, 439, 649, 1719, 3345
LweI GCATC 6 cut(s) 1329, 2186, 2327, 2695, 2717, 2771
MaeI CTAG 5 cut(s) 198, 791, 1253, 2660, 3171
MaeII ACGT 1 cut(s) 1408
MaeIII GTNAC 8 cut(s) 773, 893, 933, 1240, 2507, 2524, 3203, 3209
MfeI CAATTG 3 cut(s) 186, 2082, 2752
MflI RGATCY 6 cut(s) 200, 325, 500, 1304, 1831, 2354
MhlI GDGCHC 3 cut(s) 366, 2153, 2991
MluI ACGCGT 1 cut(s) 494
MlyI GAGTC 5 cut(s) 188, 1614, 1869, 1939, 3282
MmeI TCCRAC 2 cut(s) 1347, 1996
Mph1103I ATGCAT 3 cut(s) 281, 1344, 2710
MroXI GAANNNNTTC 5 cut(s) 595, 1374, 1468, 2813, 2850
MslI CAYNNNNRTG 2 cut(s) 1487, 2901
MspA1I CMGCKG 3 cut(s) 72, 964, 1019
MspI CCGG 4 cut(s) 742, 771, 833, 3248
MunI CAATTG 3 cut(s) 186, 2082, 2752
MvaI CCWGG 6 cut(s) 445, 864, 1187, 1401, 2868, 3134
MvnI CGCG 3 cut(s) 496, 802, 964
MwoI GCNNNNNNNGC 8 cut(s) 848, 970, 1025, 1348, 1707, 2587, 2966, 3417
NciI CCSGG 4 cut(s) 742, 771, 833, 3249
NcoI CCATGG 1 cut(s) 670
NdeI CATATG 1 cut(s) 2856
NlaIV GGNNCC 5 cut(s) 327, 344, 668, 868, 2928
NmuCI GTSAC 4 cut(s) 773, 933, 1240, 2524
NruI TCGCGA 1 cut(s) 802
NsbI TGCGCA 1 cut(s) 982
NsiI ATGCAT 3 cut(s) 281, 1344, 2710
NspI RCATGY 2 cut(s) 679, 2937
PaeI GCATGC 2 cut(s) 679, 2937
PaeR7I CTCGAG 1 cut(s) 1925
PagI TCATGA 2 cut(s) 1426, 1446
PceI AGGCCT 2 cut(s) 169, 1593
PdmI GAANNNNTTC 5 cut(s) 595, 1374, 1468, 2813, 2850
PfeI GAWTC 9 cut(s) 596, 1469, 1816, 1903, 1955, 2113, 2533, 2829, 3140
PflMI CCANNNNNTGG 2 cut(s) 1483, 2998
PfoI TCCNGGA 2 cut(s) 443, 2866
PkrI GCNGC 6 cut(s) 184, 342, 454, 639, 1709, 3335
PleI GAGTC 5 cut(s) 188, 1614, 1868, 1938, 3281
PpsI GAGTC 5 cut(s) 188, 1614, 1868, 1938, 3281
PpuMI RGGWCCY 2 cut(s) 697, 2927
PshAI GACNNNNGTC 1 cut(s) 464
PshBI ATTAAT 1 cut(s) 1970
Psp124BI GAGCTC 1 cut(s) 366
Psp5II RGGWCCY 2 cut(s) 697, 2927
Psp6I CCWGG 6 cut(s) 443, 862, 1185, 1399, 2866, 3132
PspEI GGTNACC 2 cut(s) 773, 2524
PspFI CCCAGC 3 cut(s) 721, 1019, 1365
PspGI CCWGG 6 cut(s) 443, 862, 1185, 1399, 2866, 3132
PspN4I GGNNCC 5 cut(s) 327, 344, 668, 868, 2928
PspPI GGNCC 5 cut(s) 292, 697, 1579, 2927, 3245
PspPPI RGGWCCY 2 cut(s) 697, 2927
PsuI RGATCY 6 cut(s) 200, 325, 500, 1304, 1831, 2354
PvuII CAGCTG 1 cut(s) 1019
RruI TCGCGA 1 cut(s) 802
RsaI GTAC 4 cut(s) 2683, 2979, 3182, 3190
RsaNI GTAC 4 cut(s) 2682, 2978, 3181, 3189
RseI CAYNNNNRTG 2 cut(s) 1487, 2901
SacI GAGCTC 1 cut(s) 366
SacII CCGCGG 1 cut(s) 965
SatI GCNGC 6 cut(s) 183, 341, 453, 638, 1708, 3334
Sau96I GGNCC 5 cut(s) 292, 697, 1579, 2927, 3245
ScaI AGTACT 1 cut(s) 3182
SchI GAGTC 5 cut(s) 188, 1614, 1869, 1939, 3282
SduI GDGCHC 3 cut(s) 366, 2153, 2991
SfaNI GCATC 6 cut(s) 1329, 2186, 2327, 2695, 2717, 2771
SfcI CTRYAG 1 cut(s) 1392
Sfr274I CTCGAG 1 cut(s) 1925
Sfr303I CCGCGG 1 cut(s) 965
SgrBI CCGCGG 1 cut(s) 965
SinI GGWCC 3 cut(s) 697, 1579, 2927
SlaI CTCGAG 1 cut(s) 1925
SmiMI CAYNNNNRTG 2 cut(s) 1487, 2901
SmlI CTYRAG 5 cut(s) 146, 1615, 1820, 1925, 2591
SmoI CTYRAG 5 cut(s) 146, 1615, 1820, 1925, 2591
SphI GCATGC 2 cut(s) 679, 2937
SseBI AGGCCT 2 cut(s) 169, 1593
SspI AATATT 2 cut(s) 1194, 2878
SspMI CTAG 5 cut(s) 198, 791, 1253, 2660, 3171
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 2 cut(s) 169, 1593
StyI CCWWGG 3 cut(s) 670, 1477, 1873
TaaI ACNGT 7 cut(s) 812, 893, 1006, 1386, 2243, 3209, 3215
TaiI ACGT 1 cut(s) 1411
TaqI TCGA 2 cut(s) 1626, 1926
TatI WGTACW 3 cut(s) 2681, 2977, 3180
TauI GCSGC 1 cut(s) 343
TfiI GAWTC 9 cut(s) 596, 1469, 1816, 1903, 1955, 2113, 2533, 2829, 3140
TscAI CASTG 5 cut(s) 896, 2694, 3003, 3403, 3409
TseFI GTSAC 4 cut(s) 773, 933, 1240, 2524
TseI GCWGC 5 cut(s) 182, 452, 637, 1707, 3333
Tsp45I GTSAC 4 cut(s) 773, 933, 1240, 2524
TspGWI ACGGA 4 cut(s) 541, 1029, 2736, 3266
TspRI CASTG 5 cut(s) 896, 2694, 3003, 3403, 3409
Van91I CCANNNNNTGG 2 cut(s) 1483, 2998
VpaK11BI GGWCC 3 cut(s) 697, 1579, 2927
VspI ATTAAT 1 cut(s) 1970
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 2 cut(s) 679, 2937
XcmI CCANNNNNNNNNTGG 2 cut(s) 1871, 2903
XhoI CTCGAG 1 cut(s) 1925
XmiI GTMKAC 2 cut(s) 557, 2656
XmnI GAANNNNTTC 5 cut(s) 595, 1374, 1468, 2813, 2850
XspI CTAG 5 cut(s) 198, 791, 1253, 2660, 3171
ZrmI AGTACT 1 cut(s) 3182
Zsp2I ATGCAT 3 cut(s) 281, 1344, 2710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.