Rmu_sc0002132.1_g000015

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002132.1
OG0000105
Physical Location & Seq
Forward (+)
59852 .. 63935
4084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002132.1_g000015.1.cds

Sequence Viewer

Length: 3378 bp
atggcgtcaacctcttctcgtcgtcaatggaaattcgatgtgtttctaagtttcaggggggaagatacccgcgagggttttaccggtgttctgtatgatgaactaaatcggaaaggaattctgacctttatggatgacgcagagcttgagaaaggaaaatccattaggcctgaacttttagctgcaattgaggactccagatctgcgattgtcattctctcacccaactttgctcgttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaaaatatgggccaacaagtcctccccgtcttctactacggcgtggatccttctgatgtgcggcaccaaacgcgaagttttgagctcaaaagcaaaccggaagtaagggcacatgaagaagtttatgggaagaatgaggacagactaattgcgtggagagctgctttgacacaggtcgccaatctttctggctggcatgccgataattattcacattcaagaaaactatttcaggaaattggtaatcatatactaaagaagtccgtgtatacatcttcaagtgttgacaagggtttcataggaatggattcccgcattcatgatttgttaagcaattacatatgtccgcagctttgtggggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctcgagctatccatgatcaaatttgtcaggattttgaccgaacctgctttctttccaatgttagagaaatgtctaaaaacaatggcctagcttctctacaagaaaaacttctttccaaaatcctaatggcaaaaattaaaaatatagaggatgaatacacaggagctgctatgatacaaaagcggttgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtgcagggagcagaattgtcataaccaccacagatgttcagttgttaaaggcacatgatgttgatgctacatacaaggctaacgggttaaactgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatgtccccctccagaagattatttggatctgtgctgccatattttagggtatgctcaggggcttccgttggctctcgtggttttaggttcttttctgtttggaagaagtgctgatgagtgggcaagtgcaatagataggctaaagaacacaccacataaacatattattgaggtgcttcggattagttttgatggactggatgaaaaagataaagaaatattcctacatatagcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactagactattgccagctataccctgtcattggtttaagtgttctagctgatagatctctcataactatatccaacaacgaactgttgatgcatgatttgctacaagaaacgggctgggaaattgttcgtgaacagtctcctaaagagccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgctcaagaaaaataagggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagaagccttttcaaatttgtctcaacttagtcttctccatatttgtaatgtggaccttcctgacggcctcacttgtctttctaattccttgagactcctcgaatggactgggtatcccttgagatctctcccacaaaactttgaagcagatgaacttgttgaacttaacttgtgccacagcaacattgaacagctttggaagggaacaaagacctcgcaggtgttcagaatattaattttttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgtcggtgctttatcttgatgagactgccattgaggaactgccagtgtcaattgaacggctgagtagccttgtgtcattaaatctgagcaactgcagaaatcttgtccatcttccgagtaccatcaataaattgaagtctattaaagatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtgggggtgatggactgttttgaggaaactgatgtgaatagtgggtctgcaatagaaatgtcgtctgcccatgttcgcaggaaaaaagggagaggtccaatcgttcaaggatacaaagtagtttggcgatctttaaaaaagttcttgccttctggattggtgcaaaaagtgaatacggagccaaagagtttcctcttgcctatatcacaaaaagtgaatacagtgccaatgagtttccgcttgcccatttctggtctgtgtaatttaacatatttgaacttgagtaattgcaatcttggtgaaggagcatttgccaacgaatttggtcactttccctctttggtgatcttgaatctaagtggaaacaattttgttcgtcttccttccggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtagactagatttaagggcagatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagactaaatagatcatatttcaatttcatcaattgcttcaatctaaatggcaatgaaggatgcaataacatagcatttgaaatgctgaggacactcatgtatcagggaatctctaataagagggaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcctgcaaattggaataagagtcggtttttgggatttgctttgtgtgttgtttttgtactccatgagcaccatccggtggatgagctttatattgatgaattcaagacttttaatgcaacgcatcatcttgtatgttgcctgaagctcgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttgaatcagatcacctgtggctattctatgtatcttgtgataaatactttggtacagagtggtggcataatagttgcagtcatcttgagttcttatttgaaaccagagggccgggtctgaatgtgaaggagtgtggagtccgtctgatatatgagcaacatatgcaagagttgaaccaaataaccactcaatcaagcagtggcatgtctccttatgaggatatattgattggttctgacattccagttgcaggggaaaccagtggcactggtagcagaacttgcacacttgaagagttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1125

Amino Acids

127.45

Weight (kDa)

6.63

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1864
Acc36I ACCTGC 2 cut(s) 746, 1864
AccB1I GGYRCC 1 cut(s) 345
AccB7I CCANNNNNTGG 2 cut(s) 1612, 2938
AccI GTMKAC 2 cut(s) 551, 2620
AccII CGCG 2 cut(s) 72, 355
AciI CCGC 7 cut(s) 70, 343, 595, 629, 670, 877, 2383
AclI AACGTT 1 cut(s) 1948
AclWI GGATC 7 cut(s) 323, 336, 652, 665, 927, 1137, 1371
AcsI RAATTY 8 cut(s) 32, 117, 714, 1669, 2465, 2677, 2960, 3065
AcuI CTGAAG 1 cut(s) 3023
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 2071, 2647, 2919, 3130
AfiI CCNNNNNNNGG 5 cut(s) 1409, 1612, 2396, 2938, 3326
AgeI ACCGGT 1 cut(s) 83
AjnI CCWGG 3 cut(s) 1528, 2830, 3072
AjuI GAANNNNNNNTTGG 2 cut(s) 2552, 2584
Alw21I GWGCWC 3 cut(s) 369, 1578, 2931
Alw26I GTCTC 7 cut(s) 1521, 1557, 1680, 1741, 1967, 2578, 3288
AlwI GGATC 7 cut(s) 323, 336, 652, 665, 927, 1137, 1371
AlwNI CAGNNNCTG 1 cut(s) 860
Ama87I CYCGRG 2 cut(s) 696, 1925
AoxI GGCC 5 cut(s) 167, 292, 778, 1720, 3185
ApeKI GCWGC 5 cut(s) 182, 443, 631, 860, 1137
ApoI RAATTY 8 cut(s) 32, 117, 714, 1669, 2465, 2677, 2960, 3065
AseI ATTAAT 1 cut(s) 1889
AsiGI ACCGGT 1 cut(s) 83
Asp700I GAANNNNTTC 6 cut(s) 589, 801, 1071, 1503, 1597, 2814
AspS9I GGNCC 4 cut(s) 292, 1708, 2240, 3185
AsuC2I CCSGG 1 cut(s) 3189
AsuHPI GGTGA 5 cut(s) 213, 2164, 2456, 2500, 3080
AvaI CYCGRG 2 cut(s) 696, 1925
AvaII GGWCC 2 cut(s) 1708, 2240
BaeGI GKGCMC 1 cut(s) 394
BaeI ACNNNNGTAYC 2 cut(s) 2768, 2801
BamHI GGATCC 2 cut(s) 328, 657
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 1 cut(s) 369
BauI CACGAG 1 cut(s) 1178
BbsI GAAGAC 4 cut(s) 304, 1566, 1679, 2516
Bbv12I GWGCWC 3 cut(s) 369, 1578, 2931
BbvCI CCTCAGC 1 cut(s) 2771
BbvI GCAGC 5 cut(s) 169, 430, 643, 847, 1124
BccI CCATC 9 cut(s) 1289, 2067, 2081, 2149, 2617, 2633, 2868, 2940, 3005
BceAI ACGGC 3 cut(s) 337, 1735, 2024
BciT130I CCWGG 3 cut(s) 1530, 2832, 3074
BciVI GTATCC 2 cut(s) 1779, 2249
BclI TGATCA 1 cut(s) 709
BcnI CCSGG 1 cut(s) 3189
BcoDI GTCTC 7 cut(s) 1521, 1557, 1680, 1741, 1967, 2578, 3288
BfaI CTAG 4 cut(s) 782, 1382, 1424, 2624
BfmI CTRYAG 1 cut(s) 2044
BfuAI ACCTGC 2 cut(s) 746, 1864
BfuI GTATCC 2 cut(s) 1779, 2249
BglII AGATCT 4 cut(s) 200, 1433, 1778, 2098
BisI GCNGC 6 cut(s) 183, 344, 444, 632, 861, 1138
BlsI GCNGC 6 cut(s) 184, 345, 445, 633, 862, 1139
Bme1390I CCNGG 4 cut(s) 1530, 2832, 3074, 3189
Bme18I GGWCC 2 cut(s) 1708, 2240
BmeT110I CYCGRG 2 cut(s) 696, 1925
BmgT120I GGNCC 4 cut(s) 292, 1708, 2240, 3185
BmiI GGNNCC 4 cut(s) 330, 347, 659, 2325
BmrFI CCNGG 4 cut(s) 1530, 2832, 3074, 3189
BmrI ACTGGG 1 cut(s) 1773
BmsI GCATC 7 cut(s) 1021, 1458, 2105, 2659, 2681, 2735, 2992
BmuI ACTGGG 1 cut(s) 1773
BoxI GACNNNNGTC 1 cut(s) 455
BpiI GAAGAC 4 cut(s) 304, 1566, 1679, 2516
BpmI CTGGAG 2 cut(s) 181, 1098
Bpu10I CCTNAGC 2 cut(s) 1158, 2771
BpuEI CTTGAG 7 cut(s) 167, 1562, 1765, 1795, 2446, 2576, 3182
BpuMI CCSGG 1 cut(s) 3189
BsaBI GATNNNNATC 3 cut(s) 918, 1362, 2103
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1557
BsaJI CCNNGG 2 cut(s) 661, 1606
BsaWI WCCGGW 3 cut(s) 83, 379, 2935
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 5 cut(s) 1409, 1612, 2396, 2938, 3326
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 7 cut(s) 965, 1305, 1768, 1994, 3320, 3336, 3349
Bse3DI GCAATG 1 cut(s) 2743
Bse8I GATNNNNATC 3 cut(s) 918, 1362, 2103
BseBI CCWGG 3 cut(s) 1530, 2832, 3074
BseDI CCNNGG 2 cut(s) 661, 1606
BseGI GGATG 9 cut(s) 139, 259, 850, 1309, 2120, 2750, 2860, 2932, 2947
BseJI GATNNNNATC 3 cut(s) 918, 1362, 2103
BseLI CCNNNNNNNGG 5 cut(s) 1409, 1612, 2396, 2938, 3326
BseMI GCAATG 1 cut(s) 2743
BseMII CTCAG 5 cut(s) 1172, 2003, 2027, 2762, 2838
BseNI ACTGG 7 cut(s) 965, 1305, 1768, 1994, 3320, 3336, 3349
BseRI GAGGAG 1 cut(s) 1742
BseSI GKGCMC 1 cut(s) 394
BseXI GCAGC 5 cut(s) 169, 430, 643, 847, 1124
BseYI CCCAGC 1 cut(s) 1494
BsgI GTGCAG 1 cut(s) 990
Bsh1236I CGCG 2 cut(s) 72, 355
BshFI GGCC 5 cut(s) 169, 294, 780, 1722, 3187
BshNI GGYRCC 1 cut(s) 345
BshTI ACCGGT 1 cut(s) 83
BsiHKAI GWGCWC 3 cut(s) 369, 1578, 2931
BsiHKCI CYCGRG 2 cut(s) 696, 1925
BsiSI CCGG 5 cut(s) 84, 380, 2532, 2936, 3188
BslFI GGGAC 1 cut(s) 1092
BslI CCNNNNNNNGG 5 cut(s) 1409, 1612, 2396, 2938, 3326
BsmAI GTCTC 7 cut(s) 1521, 1557, 1680, 1741, 1967, 2578, 3288
BsmFI GGGAC 1 cut(s) 1092
BsmI GAATGC 1 cut(s) 597
BsnI GGCC 5 cut(s) 169, 294, 780, 1722, 3187
Bso31I GGTCTC 1 cut(s) 1557
BsoBI CYCGRG 2 cut(s) 696, 1925
Bsp1286I GDGCHC 4 cut(s) 369, 394, 1578, 2931
Bsp19I CCATGG 1 cut(s) 661
BspACI CCGC 7 cut(s) 70, 343, 595, 629, 670, 877, 2383
BspANI GGCC 5 cut(s) 169, 294, 780, 1722, 3187
BspCNI CTCAG 5 cut(s) 1171, 2004, 2028, 2763, 2839
BspFNI CGCG 2 cut(s) 72, 355
BspHI TCATGA 2 cut(s) 601, 1555
BspLI GGNNCC 4 cut(s) 330, 347, 659, 2325
BspMAI CTGCAG 1 cut(s) 2048
BspMI ACCTGC 2 cut(s) 746, 1864
BspPI GGATC 7 cut(s) 323, 336, 652, 665, 927, 1137, 1371
BspT107I GGYRCC 1 cut(s) 345
BspTNI GGTCTC 1 cut(s) 1557
BsrDI GCAATG 1 cut(s) 2743
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 7 cut(s) 965, 1305, 1768, 1994, 3320, 3336, 3349
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 661, 1606
BssNAI GTATAC 1 cut(s) 552
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1178
BssT1I CCWWGG 2 cut(s) 661, 1606
Bst1107I GTATAC 1 cut(s) 552
Bst2BI CACGAG 1 cut(s) 1178
Bst2UI CCWGG 3 cut(s) 1530, 2832, 3074
Bst4CI ACNGT 5 cut(s) 1061, 1464, 1515, 2162, 2368
Bst6I CTCTTC 3 cut(s) 19, 3010, 3363
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 3 cut(s) 1477, 3238, 3357
BstC8I GCNNGC 7 cut(s) 476, 480, 668, 1339, 1394, 2387, 3045
BstDEI CTNAG 9 cut(s) 47, 1158, 1682, 2012, 2036, 2501, 2550, 2771, 2847
BstDSI CCRYGG 1 cut(s) 661
BstF5I GGATG 9 cut(s) 139, 259, 850, 1309, 2120, 2750, 2860, 2932, 2947
BstFNI CGCG 2 cut(s) 72, 355
BstMAI GTCTC 7 cut(s) 1521, 1557, 1680, 1741, 1967, 2578, 3288
BstMWI GCNNNNNNNGC 8 cut(s) 352, 440, 672, 1477, 2551, 3238, 3348, 3357
BstNI CCWGG 3 cut(s) 1530, 2832, 3074
BstNSI RCATGY 3 cut(s) 482, 670, 3283
BstPAI GACNNNNGTC 1 cut(s) 455
BstSCI CCNGG 4 cut(s) 1528, 2830, 3072, 3187
BstSFI CTRYAG 1 cut(s) 2044
BstSLI GKGCMC 1 cut(s) 394
BstUI CGCG 2 cut(s) 72, 355
BstV1I GCAGC 5 cut(s) 169, 430, 643, 847, 1124
BstV2I GAAGAC 4 cut(s) 304, 1566, 1679, 2516
BstX2I RGATCY 7 cut(s) 200, 328, 657, 1129, 1433, 1778, 2098
BstYI RGATCY 7 cut(s) 200, 328, 657, 1129, 1433, 1778, 2098
BstZ17I GTATAC 1 cut(s) 552
BsuI GTATCC 2 cut(s) 1779, 2249
BsuRI GGCC 5 cut(s) 169, 294, 780, 1722, 3187
BtgI CCRYGG 1 cut(s) 661
BtsCI GGATG 9 cut(s) 139, 259, 850, 1309, 2120, 2750, 2860, 2932, 2947
BtsI GCAGTG 1 cut(s) 3280
BtsIMutI CAGTG 6 cut(s) 2001, 2373, 2651, 3280, 3342, 3343
BveI ACCTGC 2 cut(s) 746, 1864
Cac8I GCNNGC 7 cut(s) 476, 480, 668, 1339, 1394, 2387, 3045
CaiI CAGNNNCTG 1 cut(s) 860
CciI TCATGA 2 cut(s) 601, 1555
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 4 cut(s) 292, 1708, 2240, 3185
CseI GACGC 1 cut(s) 146
Csp6I GTAC 4 cut(s) 2070, 2646, 2918, 3129
CspAI ACCGGT 1 cut(s) 83
CviQI GTAC 4 cut(s) 2070, 2646, 2918, 3129
DdeI CTNAG 9 cut(s) 47, 1158, 1682, 2012, 2036, 2501, 2550, 2771, 2847
DraI TTTAAA 1 cut(s) 2280
Eam1104I CTCTTC 3 cut(s) 19, 3010, 3363
EarI CTCTTC 3 cut(s) 19, 3010, 3363
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 2 cut(s) 661, 1606
Eco147I AGGCCT 1 cut(s) 169
Eco24I GRGCYC 1 cut(s) 369
Eco31I GGTCTC 1 cut(s) 1557
Eco47I GGWCC 2 cut(s) 1708, 2240
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 1 cut(s) 3023
Eco88I CYCGRG 2 cut(s) 696, 1925
EcoICRI GAGCTC 1 cut(s) 367
EcoRI GAATTC 2 cut(s) 117, 2960
EcoRII CCWGG 3 cut(s) 1528, 2830, 3072
EcoT14I CCWWGG 2 cut(s) 661, 1606
EcoT22I ATGCAT 3 cut(s) 281, 1473, 2674
EcoT38I GRGCYC 1 cut(s) 369
ErhI CCWWGG 2 cut(s) 661, 1606
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FaqI GGGAC 1 cut(s) 1092
FauI CCCGC 3 cut(s) 77, 602, 663
FauNDI CATATG 2 cut(s) 623, 3237
FbaI TGATCA 1 cut(s) 709
FblI GTMKAC 2 cut(s) 551, 2620
Fnu4HI GCNGC 6 cut(s) 183, 344, 444, 632, 861, 1138
FokI GGATG 9 cut(s) 146, 266, 857, 1316, 2127, 2757, 2847, 2919, 2954
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 6 cut(s) 183, 344, 444, 632, 861, 1138
FspBI CTAG 4 cut(s) 782, 1382, 1424, 2624
GluI GCNGC 6 cut(s) 183, 344, 444, 632, 861, 1138
GsaI CCCAGC 1 cut(s) 1498
GsuI CTGGAG 2 cut(s) 181, 1098
HaeIII GGCC 5 cut(s) 169, 294, 780, 1722, 3187
HapII CCGG 5 cut(s) 84, 380, 2532, 2936, 3188
HgaI GACGC 1 cut(s) 146
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 4 cut(s) 9, 568, 927, 1626
HindII GTYRAC 4 cut(s) 9, 568, 927, 1626
HindIII AAGCTT 1 cut(s) 2552
HpaII CCGG 5 cut(s) 84, 380, 2532, 2936, 3188
HphI GGTGA 5 cut(s) 213, 2164, 2456, 2500, 3080
Hpy166II GTNNAC 8 cut(s) 9, 552, 568, 927, 1511, 1626, 1708, 2621
Hpy8I GTNNAC 8 cut(s) 9, 552, 568, 927, 1511, 1626, 1708, 2621
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 5 cut(s) 1061, 1464, 1515, 2162, 2368
HpyCH4IV ACGT 2 cut(s) 1537, 1948
HpyF10VI GCNNNNNNNGC 8 cut(s) 352, 440, 672, 1477, 2551, 3238, 3348, 3357
HpyF3I CTNAG 9 cut(s) 47, 1158, 1682, 2012, 2036, 2501, 2550, 2771, 2847
HpySE526I ACGT 2 cut(s) 1537, 1948
Hsp92I GRCGYC 1 cut(s) 5
Ksp22I TGATCA 1 cut(s) 709
LmnI GCTCC 4 cut(s) 857, 975, 2323, 2450
Lsp1109I GCAGC 5 cut(s) 169, 430, 643, 847, 1124
LweI GCATC 7 cut(s) 1021, 1458, 2105, 2659, 2681, 2735, 2992
MaeI CTAG 4 cut(s) 782, 1382, 1424, 2624
MaeII ACGT 2 cut(s) 1537, 1948
MaeIII GTNAC 2 cut(s) 1369, 2471
MfeI CAATTG 3 cut(s) 186, 2001, 2716
MflI RGATCY 7 cut(s) 200, 328, 657, 1129, 1433, 1778, 2098
MhlI GDGCHC 4 cut(s) 369, 394, 1578, 2931
MlyI GAGTC 4 cut(s) 188, 1743, 2890, 3222
MmeI TCCRAC 2 cut(s) 1476, 1915
Mph1103I ATGCAT 3 cut(s) 281, 1473, 2674
MroXI GAANNNNTTC 6 cut(s) 589, 801, 1071, 1503, 1597, 2814
MslI CAYNNNNRTG 2 cut(s) 584, 1616
MspI CCGG 5 cut(s) 84, 380, 2532, 2936, 3188
MspR9I CCNGG 4 cut(s) 1530, 2832, 3074, 3189
MunI CAATTG 3 cut(s) 186, 2001, 2716
Mva1269I GAATGC 1 cut(s) 597
MvaI CCWGG 3 cut(s) 1530, 2832, 3074
MvnI CGCG 2 cut(s) 72, 355
MwoI GCNNNNNNNGC 8 cut(s) 352, 440, 672, 1477, 2551, 3238, 3348, 3357
NciI CCSGG 1 cut(s) 3189
NcoI CCATGG 1 cut(s) 661
NdeI CATATG 2 cut(s) 623, 3237
NlaIV GGNNCC 4 cut(s) 330, 347, 659, 2325
NmeAIII GCCGAG 1 cut(s) 2106
NmuCI GTSAC 2 cut(s) 1369, 2471
NsiI ATGCAT 3 cut(s) 281, 1473, 2674
NspI RCATGY 3 cut(s) 482, 670, 3283
PaeI GCATGC 2 cut(s) 482, 670
PaeR7I CTCGAG 1 cut(s) 696
PagI TCATGA 2 cut(s) 601, 1555
PaqCI CACCTGC 1 cut(s) 1864
PceI AGGCCT 1 cut(s) 169
PctI GAATGC 1 cut(s) 597
PdmI GAANNNNTTC 6 cut(s) 589, 801, 1071, 1503, 1597, 2814
PfeI GAWTC 6 cut(s) 590, 1598, 1921, 2497, 2793, 3080
PflMI CCANNNNNTGG 2 cut(s) 1612, 2938
PfoI TCCNGGA 1 cut(s) 2830
PinAI ACCGGT 1 cut(s) 83
PkrI GCNGC 6 cut(s) 184, 345, 445, 633, 862, 1139
PleI GAGTC 4 cut(s) 188, 1743, 2889, 3221
PpsI GAGTC 4 cut(s) 188, 1743, 2889, 3221
PshAI GACNNNNGTC 1 cut(s) 455
PshBI ATTAAT 1 cut(s) 1889
Psp124BI GAGCTC 1 cut(s) 369
Psp1406I AACGTT 1 cut(s) 1948
Psp6I CCWGG 3 cut(s) 1528, 2830, 3072
PspFI CCCAGC 1 cut(s) 1494
PspGI CCWGG 3 cut(s) 1528, 2830, 3072
PspN4I GGNNCC 4 cut(s) 330, 347, 659, 2325
PspPI GGNCC 4 cut(s) 292, 1708, 2240, 3185
PspXI VCTCGAGB 1 cut(s) 696
PstI CTGCAG 1 cut(s) 2048
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 7 cut(s) 200, 328, 657, 1129, 1433, 1778, 2098
RsaI GTAC 4 cut(s) 2071, 2647, 2919, 3130
RsaNI GTAC 4 cut(s) 2070, 2646, 2918, 3129
RseI CAYNNNNRTG 2 cut(s) 584, 1616
SacI GAGCTC 1 cut(s) 369
SatI GCNGC 6 cut(s) 183, 344, 444, 632, 861, 1138
Sau96I GGNCC 4 cut(s) 292, 1708, 2240, 3185
SchI GAGTC 4 cut(s) 188, 1743, 2890, 3222
ScrFI CCNGG 4 cut(s) 1530, 2832, 3074, 3189
SduI GDGCHC 4 cut(s) 369, 394, 1578, 2931
SfaNI GCATC 7 cut(s) 1021, 1458, 2105, 2659, 2681, 2735, 2992
SfcI CTRYAG 1 cut(s) 2044
Sfr274I CTCGAG 1 cut(s) 696
SinI GGWCC 2 cut(s) 1708, 2240
SlaI CTCGAG 1 cut(s) 696
SmiMI CAYNNNNRTG 2 cut(s) 584, 1616
SmlI CTYRAG 8 cut(s) 146, 696, 1577, 1744, 1774, 2425, 2555, 3161
SmoI CTYRAG 8 cut(s) 146, 696, 1577, 1744, 1774, 2425, 2555, 3161
SphI GCATGC 2 cut(s) 482, 670
SseBI AGGCCT 1 cut(s) 169
SsiI CCGC 7 cut(s) 70, 343, 595, 629, 670, 877, 2383
SspI AATATT 3 cut(s) 1323, 1887, 2842
SspMI CTAG 4 cut(s) 782, 1382, 1424, 2624
SstI GAGCTC 1 cut(s) 369
StuI AGGCCT 1 cut(s) 169
StyD4I CCNGG 4 cut(s) 1528, 2830, 3072, 3187
StyI CCWWGG 2 cut(s) 661, 1606
TaaI ACNGT 5 cut(s) 1061, 1464, 1515, 2162, 2368
TaiI ACGT 2 cut(s) 1540, 1951
TaqI TCGA 4 cut(s) 36, 697, 1755, 3009
TaqII GACCGA 1 cut(s) 747
TatI WGTACW 2 cut(s) 2645, 2917
TauI GCSGC 1 cut(s) 346
TfiI GAWTC 6 cut(s) 590, 1598, 1921, 2497, 2793, 3080
TscAI CASTG 6 cut(s) 2001, 2373, 2658, 3280, 3343, 3349
TseFI GTSAC 2 cut(s) 1369, 2471
TseI GCWGC 5 cut(s) 182, 443, 631, 860, 1137
Tsp45I GTSAC 2 cut(s) 1369, 2471
TspGWI ACGGA 4 cut(s) 535, 1158, 2336, 3206
TspRI CASTG 6 cut(s) 2001, 2373, 2658, 3280, 3343, 3349
Van91I CCANNNNNTGG 2 cut(s) 1612, 2938
VpaK11BI GGWCC 2 cut(s) 1708, 2240
VspI ATTAAT 1 cut(s) 1889
XapI RAATTY 8 cut(s) 32, 117, 714, 1669, 2465, 2677, 2960, 3065
XceI RCATGY 3 cut(s) 482, 670, 3283
XcmI CCANNNNNNNNNTGG 1 cut(s) 817
XhoI CTCGAG 1 cut(s) 696
XmiI GTMKAC 2 cut(s) 551, 2620
XmnI GAANNNNTTC 6 cut(s) 589, 801, 1071, 1503, 1597, 2814
XspI CTAG 4 cut(s) 782, 1382, 1424, 2624
Zsp2I ATGCAT 3 cut(s) 281, 1473, 2674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.