Rmu_sc0001168.1_g000012

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001168.1
OG0000105
Physical Location & Seq
Reverse (-)
54414 .. 58657
4244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001168.1_g000012.1.cds

Sequence Viewer

Length: 3627 bp
atggcgtcaacctcttctcgtcgtcgtcgtcaatggaaatacgatgtgtttctaagtttcaggggggaagatacccgcaataattttaccgatcatctgtattctacactaaatcagagaggaattctcacctttcgggatgacccagagcttgagaaaggaaaatccattaggcctgaattttttgctgcaattgaggaatctagatttgcgattgtcattctctcatggagatatggttcttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagagatgggcctacaagtcctccccgtcttctacggcgtgtatccttcagatgtgcgtcaccaaagaggaacttttgagctcagtgtgaaaccgaaagtggaagtgagggaacatgaagaagtttatgggaagaatgaggacagactaaatgcctggagagatgctttgacagacgtcgccaatatttctggctgggatttcaagagtaatcaatctggtacaaaaataattgaggatattgttaaccatatactaaagaagtccgtgtatacatcttcaagtgttgacaagggcttcataggaatggattctcgcgttgatgatttattaagcaattacatatgtccgcacctttgtagggtgcgttttatagggatccatggcatgcggggcataggtaagacaacagttgcccgagctatctatgatgaaatttgtcaggattttgaccgaacctgctttctttccaatattagagaaatgtctaaaaacaacggcctagtttctctacaagaaaaacttctttccaaaatcctgccggcaaaaattgaaaatatagacgatgaatacacaggagctgctatgatagaaaggcggttgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtccagggagtagaattatcataaccaccacagatattcagttgttaaaggcacataatgttgatgctacatacaaggctaacgggttaaactctgatgaagcactgcaacttttgagtttgaaggcttttaagaaatgtcccccaccagaacattatttacatctgtgctaccatattttagggtatgctaaggggcttccgttggctcttgtggttttaggttcttttctatttggtagaagcactgatgaatgggaaagtgcaatagataggctaaagaacacaccagataaacgcattattgacgtgcttcggattagttttgacccacataaacgaattatggaggtgcttcggattagttttgatggactggatgaaaaagacagagaaatattcctacatattgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactagactattgccagctaaaccctgtcattggtttaagtgttctagctgatagatctcttttaactatctccaacaacgaactgttgatgcatgatttactacaagaaatgggctgggaaattgttcgtgaacagtctcctaaagagccaggtaaacgtagtagattatggtctcatgaagacatcaacaatgtgctgaacagaaataagggaacagattcaatccaaggcatggtaatggagttgaccaaattacaagtggctcattggaagccagaagccttttcaaatttgtctcaacttattcttatccatattcataatgtggaccttcccgaaggcctcacttgtctttctaattccttgagactcctcgaatggactgggtatcccttaagatctctcccaaaattttttgaagcagatgaacttattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaattttgacaagttgaagttcatcaaactctgctattctcaaaaaattgtggagacccccgacctcgcaggtgttcagaatcttgagactttagatcttgaaggatgttctcatttggtaagaatccatcaatcccttggattcctcaaaaagcttattgtcctgaatcttaaagactgcaaaagtctcaagagtctgccaagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagacgattcccgagtttgttggaaatatggaacgtttgttggtgctttgtcttgatgagactgccattgaggaactgcctgtttcaattgaacggctgagtggccttgtgtcattgaatctaagcaactgcagaaatcttgtttgtcttccaaggaccatcaataaattgaagtcagtcgaaaatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtggcggggatggactgttttgaggaaactgacttgaatagtcgttctgcaatagaaatgtcatctacccatgaccgcataaaatatgtgagaggttcaatctttcatggatacaaagtggttcggggatctctaaataagttcttgccttctggattggtgcaaaaagtgaatacaaagccaacgattttcgtcttgcctatttctggtctgtctaatttaacgtatctgaacctgagtaattgcaatcttggtgaaggagcatttgccaacgaattcggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgtgttccttcaggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtagactagatttaagggctgatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagattaaacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatgacggatgcaataacatagcatttgaaatgctgaagacattcctgtatcagggaatctccaataagagggaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcagagtgttgggttgtcattaagtgtatctctacctgtacattggaataacagatgggttttgggatttgctctgtgtgctgtttttgtactccacgagcaccatcaggtggataagctttatatcgatgaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagcttgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttgaatcagatcacctgtggctattctatgtatctcgtgataaatactttggtacagagtggtggcataacagttgcagtcagtttgagttcttatttgaaaccagagggccgggtctgaaggtaaaggagtgtggagtccgtctgatatatgagaaagatgtgcaagagttgaaccaaacaaccactcaatcaagcagtgggatgtctccttatgaggatgtattgattggttttgacattccagttgcaggggaaaccagttgcactggtagcacaacttgcacgcatgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

1208

Amino Acids

137.69

Weight (kDa)

6.58

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1976
AatII GACGTC 1 cut(s) 468
Acc36I ACCTGC 2 cut(s) 755, 1976
AccB7I CCANNNNNTGG 2 cut(s) 1663, 3187
AccI GTMKAC 2 cut(s) 560, 2836
AccII CGCG 1 cut(s) 606
AciI CCGC 6 cut(s) 76, 638, 679, 886, 2411, 2482
AclI AACGTT 1 cut(s) 2209
AclWI GGATC 5 cut(s) 661, 674, 936, 1422, 2542
AcuI CTGAAG 5 cut(s) 321, 2730, 3008, 3272, 3464
AcyI GRCGYC 2 cut(s) 5, 465
AfaI GTAC 5 cut(s) 511, 2863, 3117, 3168, 3379
AfiI CCNNNNNNNGG 8 cut(s) 649, 1460, 1663, 2612, 3004, 3021, 3187, 3575
AflII CTTAAG 1 cut(s) 1825
AjiI CACGTC 1 cut(s) 1285
AjnI CCWGG 5 cut(s) 443, 979, 1579, 3046, 3321
AjuI GAANNNNNNNTTGG 2 cut(s) 2768, 2800
AloI GAACNNNNNNTCC 2 cut(s) 223, 255
Alw21I GWGCWC 2 cut(s) 372, 3180
AlwI GGATC 5 cut(s) 661, 674, 936, 1422, 2542
AlwNI CAGNNNCTG 1 cut(s) 869
Ama87I CYCGRG 2 cut(s) 705, 2186
AoxI GGCC 6 cut(s) 173, 298, 787, 1771, 2278, 3434
ApeKI GCWGC 2 cut(s) 188, 869
AseI ATTAAT 1 cut(s) 2150
Asp700I GAANNNNTTC 6 cut(s) 598, 810, 1554, 1648, 2993, 3030
AspS9I GGNCC 5 cut(s) 298, 977, 1759, 2331, 3434
AsuC2I CCSGG 1 cut(s) 3438
AsuHPI GGTGA 5 cut(s) 121, 341, 2672, 2716, 3329
AvaI CYCGRG 2 cut(s) 705, 2186
AvaII GGWCC 3 cut(s) 977, 1759, 2331
BamHI GGATCC 1 cut(s) 666
BanII GRGCYC 1 cut(s) 372
BauI CACGAG 2 cut(s) 3173, 3360
BbsI GAAGAC 4 cut(s) 310, 1617, 2315, 2996
Bbv12I GWGCWC 2 cut(s) 372, 3180
BbvI GCAGC 2 cut(s) 175, 856
BceAI ACGGC 3 cut(s) 340, 802, 2285
BciT130I CCWGG 5 cut(s) 445, 981, 1581, 3048, 3323
BciVI GTATCC 3 cut(s) 342, 1830, 2510
BcnI CCSGG 1 cut(s) 3438
BfaI CTAG 5 cut(s) 204, 791, 1433, 1475, 2840
BfmI CTRYAG 1 cut(s) 2305
BfrI CTTAAG 1 cut(s) 1825
BfuAI ACCTGC 2 cut(s) 755, 1976
BfuI GTATCC 3 cut(s) 342, 1830, 2510
BglII AGATCT 3 cut(s) 1484, 1829, 2011
BisI GCNGC 2 cut(s) 189, 870
BlsI GCNGC 2 cut(s) 190, 871
Bme1390I CCNGG 6 cut(s) 445, 981, 1581, 3048, 3323, 3438
Bme18I GGWCC 3 cut(s) 977, 1759, 2331
BmeT110I CYCGRG 2 cut(s) 705, 2186
BmgBI CACGTC 1 cut(s) 1285
BmgT120I GGNCC 5 cut(s) 298, 977, 1759, 2331, 3434
BmiI GGNNCC 1 cut(s) 668
BmrFI CCNGG 6 cut(s) 445, 981, 1581, 3048, 3323, 3438
BmrI ACTGGG 1 cut(s) 1824
BmsI GCATC 7 cut(s) 442, 1030, 1509, 2366, 2875, 2897, 2951
BmuI ACTGGG 1 cut(s) 1824
BoxI GACNNNNGTC 1 cut(s) 464
BpiI GAAGAC 4 cut(s) 310, 1617, 2315, 2996
BplI GAGNNNNNCTC 2 cut(s) 111, 143
BpmI CTGGAG 1 cut(s) 466
Bpu10I CCTNAGC 1 cut(s) 1167
BpuEI CTTGAG 5 cut(s) 173, 1816, 2021, 2090, 2792
BpuMI CCSGG 1 cut(s) 3438
Bsa29I ATCGAT 1 cut(s) 3204
BsaBI GATNNNNATC 2 cut(s) 927, 1413
BsaHI GRCGYC 2 cut(s) 5, 465
BsaI GGTCTC 2 cut(s) 1608, 1964
BsaJI CCNNGG 5 cut(s) 670, 980, 1657, 2053, 2327
BsaXI ACNNNNNCTCC 4 cut(s) 223, 253, 294, 324
Bsc4I CCNNNNNNNGG 8 cut(s) 649, 1460, 1663, 2612, 3004, 3021, 3187, 3575
Bse118I RCCGGY 1 cut(s) 829
Bse1I ACTGG 6 cut(s) 974, 1356, 1819, 3569, 3585, 3598
Bse3DI GCAATG 1 cut(s) 2959
Bse8I GATNNNNATC 2 cut(s) 927, 1413
BseBI CCWGG 5 cut(s) 445, 981, 1581, 3048, 3323
BseCI ATCGAT 1 cut(s) 3204
BseDI CCNNGG 5 cut(s) 670, 980, 1657, 2053, 2327
BseGI GGATG 9 cut(s) 145, 265, 1360, 2027, 2381, 2421, 2966, 3534, 3550
BseJI GATNNNNATC 2 cut(s) 927, 1413
BseLI CCNNNNNNNGG 8 cut(s) 649, 1460, 1663, 2612, 3004, 3021, 3187, 3575
BseMI GCAATG 1 cut(s) 2959
BseMII CTCAG 4 cut(s) 385, 2264, 2633, 3054
BseNI ACTGG 6 cut(s) 974, 1356, 1819, 3569, 3585, 3598
BseRI GAGGAG 1 cut(s) 1793
BseXI GCAGC 2 cut(s) 175, 856
BseYI CCCAGC 2 cut(s) 483, 1545
Bsh1236I CGCG 1 cut(s) 606
BshFI GGCC 6 cut(s) 175, 300, 789, 1773, 2280, 3436
BshVI ATCGAT 1 cut(s) 3204
BsiHKAI GWGCWC 2 cut(s) 372, 3180
BsiHKCI CYCGRG 2 cut(s) 705, 2186
BsiSI CCGG 2 cut(s) 830, 3437
BslFI GGGAC 1 cut(s) 1101
BslI CCNNNNNNNGG 8 cut(s) 649, 1460, 1663, 2612, 3004, 3021, 3187, 3575
BsmFI GGGAC 1 cut(s) 1101
BsnI GGCC 6 cut(s) 175, 300, 789, 1773, 2280, 3436
Bso31I GGTCTC 2 cut(s) 1608, 1964
BsoBI CYCGRG 2 cut(s) 705, 2186
Bsp1286I GDGCHC 2 cut(s) 372, 3180
Bsp1407I TGTACA 1 cut(s) 3115
Bsp143I GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
Bsp19I CCATGG 1 cut(s) 670
BspACI CCGC 6 cut(s) 76, 638, 679, 886, 2411, 2482
BspANI GGCC 6 cut(s) 175, 300, 789, 1773, 2280, 3436
BspCNI CTCAG 4 cut(s) 384, 2265, 2634, 3055
BspDI ATCGAT 1 cut(s) 3204
BspFNI CGCG 1 cut(s) 606
BspHI TCATGA 1 cut(s) 1606
BspLI GGNNCC 1 cut(s) 668
BspMAI CTGCAG 1 cut(s) 2309
BspMI ACCTGC 2 cut(s) 755, 1976
BspPI GGATC 5 cut(s) 661, 674, 936, 1422, 2542
BspTI CTTAAG 1 cut(s) 1825
BspTNI GGTCTC 2 cut(s) 1608, 1964
BsrDI GCAATG 1 cut(s) 2959
BsrFI RCCGGY 1 cut(s) 829
BsrGI TGTACA 1 cut(s) 3115
BsrI ACTGG 6 cut(s) 974, 1356, 1819, 3569, 3585, 3598
BssAI RCCGGY 1 cut(s) 829
BssECI CCNNGG 5 cut(s) 670, 980, 1657, 2053, 2327
BssMI GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
BssNAI GTATAC 1 cut(s) 561
BssNI GRCGYC 2 cut(s) 5, 465
BssSI CACGAG 2 cut(s) 3173, 3360
BssT1I CCWWGG 4 cut(s) 670, 1657, 2053, 2327
Bst1107I GTATAC 1 cut(s) 561
Bst2BI CACGAG 2 cut(s) 3173, 3360
Bst2UI CCWGG 5 cut(s) 445, 981, 1581, 3048, 3323
Bst4CI ACNGT 5 cut(s) 700, 1515, 1566, 2423, 3398
Bst6I CTCTTC 2 cut(s) 19, 3259
BstACI GRCGYC 2 cut(s) 5, 465
BstAFI CTTAAG 1 cut(s) 1825
BstAPI GCANNNNNTGC 1 cut(s) 3606
BstAUI TGTACA 1 cut(s) 3115
BstC8I GCNNGC 6 cut(s) 677, 831, 1390, 1445, 3294, 3611
BstDEI CTNAG 9 cut(s) 53, 371, 1167, 2273, 2297, 2642, 2717, 2766, 3063
BstDSI CCRYGG 1 cut(s) 670
BstEII GGTNACC 1 cut(s) 2704
BstENI CCTNNNNNAGG 1 cut(s) 3002
BstF5I GGATG 9 cut(s) 145, 265, 1360, 2027, 2381, 2421, 2966, 3534, 3550
BstFNI CGCG 1 cut(s) 606
BstKTI GATC 9 cut(s) 94, 669, 931, 1417, 1487, 1832, 2014, 2537, 3337
BstMBI GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
BstMWI GCNNNNNNNGC 5 cut(s) 681, 2767, 3155, 3597, 3606
BstNI CCWGG 5 cut(s) 445, 981, 1581, 3048, 3323
BstNSI RCATGY 1 cut(s) 679
BstPAI GACNNNNGTC 1 cut(s) 464
BstPI GGTNACC 1 cut(s) 2704
BstSCI CCNGG 6 cut(s) 443, 979, 1579, 3046, 3321, 3436
BstSFI CTRYAG 1 cut(s) 2305
BstUI CGCG 1 cut(s) 606
BstV1I GCAGC 2 cut(s) 175, 856
BstV2I GAAGAC 4 cut(s) 310, 1617, 2315, 2996
BstX2I RGATCY 5 cut(s) 666, 1484, 1829, 2011, 2534
BstYI RGATCY 5 cut(s) 666, 1484, 1829, 2011, 2534
BstZ17I GTATAC 1 cut(s) 561
Bsu15I ATCGAT 1 cut(s) 3204
BsuI GTATCC 3 cut(s) 342, 1830, 2510
BsuRI GGCC 6 cut(s) 175, 300, 789, 1773, 2280, 3436
BsuTUI ATCGAT 1 cut(s) 3204
BtgI CCRYGG 1 cut(s) 670
BtrI CACGTC 1 cut(s) 1285
BtsCI GGATG 9 cut(s) 145, 265, 1360, 2027, 2381, 2421, 2966, 3534, 3550
BtsI GCAGTG 2 cut(s) 1079, 3529
BtsIMutI CAGTG 6 cut(s) 379, 1079, 1221, 2867, 3529, 3591
BveI ACCTGC 2 cut(s) 755, 1976
Cac8I GCNNGC 6 cut(s) 677, 831, 1390, 1445, 3294, 3611
CaiI CAGNNNCTG 1 cut(s) 869
CciI TCATGA 1 cut(s) 1606
Cfr10I RCCGGY 1 cut(s) 829
Cfr13I GGNCC 5 cut(s) 298, 977, 1759, 2331, 3434
ClaI ATCGAT 1 cut(s) 3204
CseI GACGC 1 cut(s) 335
Csp6I GTAC 5 cut(s) 510, 2862, 3116, 3167, 3378
CviQI GTAC 5 cut(s) 510, 2862, 3116, 3167, 3378
DdeI CTNAG 9 cut(s) 53, 371, 1167, 2273, 2297, 2642, 2717, 2766, 3063
DpnI GATC 9 cut(s) 93, 668, 930, 1416, 1486, 1831, 2013, 2536, 3336
DpnII GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
Eam1104I CTCTTC 2 cut(s) 19, 3259
EarI CTCTTC 2 cut(s) 19, 3259
Ecl136II GAGCTC 1 cut(s) 370
Eco130I CCWWGG 4 cut(s) 670, 1657, 2053, 2327
Eco147I AGGCCT 2 cut(s) 175, 1773
Eco24I GRGCYC 1 cut(s) 372
Eco31I GGTCTC 2 cut(s) 1608, 1964
Eco47I GGWCC 3 cut(s) 977, 1759, 2331
Eco53kI GAGCTC 1 cut(s) 370
Eco57I CTGAAG 5 cut(s) 321, 2730, 3008, 3272, 3464
Eco88I CYCGRG 2 cut(s) 705, 2186
Eco91I GGTNACC 1 cut(s) 2704
EcoICRI GAGCTC 1 cut(s) 370
EcoNI CCTNNNNNAGG 1 cut(s) 3002
EcoO65I GGTNACC 1 cut(s) 2704
EcoRI GAATTC 3 cut(s) 123, 2681, 3209
EcoRII CCWGG 5 cut(s) 443, 979, 1579, 3046, 3321
EcoT14I CCWWGG 4 cut(s) 670, 1657, 2053, 2327
EcoT22I ATGCAT 3 cut(s) 287, 1524, 2890
EcoT38I GRGCYC 1 cut(s) 372
ErhI CCWWGG 4 cut(s) 670, 1657, 2053, 2327
FalI AAGNNNNNCTT 4 cut(s) 346, 378, 795, 827
FaqI GGGAC 1 cut(s) 1101
FauI CCCGC 3 cut(s) 83, 672, 2404
FauNDI CATATG 1 cut(s) 632
FblI GTMKAC 2 cut(s) 560, 2836
Fnu4HI GCNGC 2 cut(s) 189, 870
FokI GGATG 9 cut(s) 152, 272, 1367, 2034, 2388, 2428, 2973, 3541, 3557
FriOI GRGCYC 1 cut(s) 372
Fsp4HI GCNGC 2 cut(s) 189, 870
FspBI CTAG 5 cut(s) 204, 791, 1433, 1475, 2840
GluI GCNGC 2 cut(s) 189, 870
GsaI CCCAGC 2 cut(s) 487, 1549
GsuI CTGGAG 1 cut(s) 466
HaeIII GGCC 6 cut(s) 175, 300, 789, 1773, 2280, 3436
HapII CCGG 2 cut(s) 830, 3437
HgaI GACGC 1 cut(s) 335
Hin1I GRCGYC 2 cut(s) 5, 465
HincII GTYRAC 5 cut(s) 9, 535, 577, 936, 1677
HindII GTYRAC 5 cut(s) 9, 535, 577, 936, 1677
HindIII AAGCTT 4 cut(s) 2069, 2768, 3194, 3254
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 2 cut(s) 830, 3437
HphI GGTGA 5 cut(s) 121, 341, 2672, 2716, 3329
Hpy99I CGWCG 4 cut(s) 24, 27, 30, 470
HpyCH4III ACNGT 5 cut(s) 700, 1515, 1566, 2423, 3398
HpyCH4IV ACGT 5 cut(s) 465, 1284, 1588, 2209, 2630
HpyF10VI GCNNNNNNNGC 5 cut(s) 681, 2767, 3155, 3597, 3606
HpyF3I CTNAG 9 cut(s) 53, 371, 1167, 2273, 2297, 2642, 2717, 2766, 3063
HpySE526I ACGT 5 cut(s) 465, 1284, 1588, 2209, 2630
Hsp92I GRCGYC 2 cut(s) 5, 465
KroI GCCGGC 1 cut(s) 829
KroNI GCCGGC 1 cut(s) 831
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
LmnI GCTCC 2 cut(s) 866, 2666
Lsp1109I GCAGC 2 cut(s) 175, 856
LweI GCATC 7 cut(s) 442, 1030, 1509, 2366, 2875, 2897, 2951
MaeI CTAG 5 cut(s) 204, 791, 1433, 1475, 2840
MaeII ACGT 5 cut(s) 465, 1284, 1588, 2209, 2630
MaeIII GTNAC 4 cut(s) 347, 1420, 2687, 2704
MalI GATC 9 cut(s) 93, 668, 930, 1416, 1486, 1831, 2013, 2536, 3336
MboI GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
MfeI CAATTG 3 cut(s) 192, 2262, 2932
MflI RGATCY 5 cut(s) 666, 1484, 1829, 2011, 2534
MhlI GDGCHC 2 cut(s) 372, 3180
MlyI GAGTC 3 cut(s) 1794, 2119, 3471
MmeI TCCRAC 2 cut(s) 1527, 2176
Mph1103I ATGCAT 3 cut(s) 287, 1524, 2890
MroNI GCCGGC 1 cut(s) 829
MroXI GAANNNNTTC 6 cut(s) 598, 810, 1554, 1648, 2993, 3030
MslI CAYNNNNRTG 3 cut(s) 593, 1667, 3081
MspCI CTTAAG 1 cut(s) 1825
MspI CCGG 2 cut(s) 830, 3437
MspR9I CCNGG 6 cut(s) 445, 981, 1581, 3048, 3323, 3438
MunI CAATTG 3 cut(s) 192, 2262, 2932
MvaI CCWGG 5 cut(s) 445, 981, 1581, 3048, 3323
MvnI CGCG 1 cut(s) 606
MwoI GCNNNNNNNGC 5 cut(s) 681, 2767, 3155, 3597, 3606
NaeI GCCGGC 1 cut(s) 831
NciI CCSGG 1 cut(s) 3438
NcoI CCATGG 1 cut(s) 670
NdeI CATATG 1 cut(s) 632
NdeII GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
NgoMIV GCCGGC 1 cut(s) 829
NlaIV GGNNCC 1 cut(s) 668
NmeAIII GCCGAG 1 cut(s) 2367
NmuCI GTSAC 3 cut(s) 347, 1420, 2704
NsiI ATGCAT 3 cut(s) 287, 1524, 2890
NspI RCATGY 1 cut(s) 679
PaeI GCATGC 1 cut(s) 679
PagI TCATGA 1 cut(s) 1606
PaqCI CACCTGC 1 cut(s) 1976
PceI AGGCCT 2 cut(s) 175, 1773
PcsI WCGNNNNNNNCGW 1 cut(s) 25
PdiI GCCGGC 1 cut(s) 831
PdmI GAANNNNTTC 6 cut(s) 598, 810, 1554, 1648, 2993, 3030
PflMI CCANNNNNTGG 2 cut(s) 1663, 3187
PfoI TCCNGGA 1 cut(s) 3046
PkrI GCNGC 2 cut(s) 190, 871
PleI GAGTC 3 cut(s) 1794, 2118, 3470
PpsI GAGTC 3 cut(s) 1794, 2118, 3470
PshAI GACNNNNGTC 1 cut(s) 464
PshBI ATTAAT 1 cut(s) 2150
Psp124BI GAGCTC 1 cut(s) 372
Psp1406I AACGTT 1 cut(s) 2209
Psp6I CCWGG 5 cut(s) 443, 979, 1579, 3046, 3321
PspEI GGTNACC 1 cut(s) 2704
PspFI CCCAGC 2 cut(s) 483, 1545
PspGI CCWGG 5 cut(s) 443, 979, 1579, 3046, 3321
PspN4I GGNNCC 1 cut(s) 668
PspPI GGNCC 5 cut(s) 298, 977, 1759, 2331, 3434
PsrI GAACNNNNNNTAC 2 cut(s) 1119, 1151
PstI CTGCAG 1 cut(s) 2309
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 5 cut(s) 666, 1484, 1829, 2011, 2534
RsaI GTAC 5 cut(s) 511, 2863, 3117, 3168, 3379
RsaNI GTAC 5 cut(s) 510, 2862, 3116, 3167, 3378
RseI CAYNNNNRTG 3 cut(s) 593, 1667, 3081
SacI GAGCTC 1 cut(s) 372
SatI GCNGC 2 cut(s) 189, 870
Sau3AI GATC 9 cut(s) 91, 666, 928, 1414, 1484, 1829, 2011, 2534, 3334
Sau96I GGNCC 5 cut(s) 298, 977, 1759, 2331, 3434
SchI GAGTC 3 cut(s) 1794, 2119, 3471
ScrFI CCNGG 6 cut(s) 445, 981, 1581, 3048, 3323, 3438
SduI GDGCHC 2 cut(s) 372, 3180
SfaNI GCATC 7 cut(s) 442, 1030, 1509, 2366, 2875, 2897, 2951
SfcI CTRYAG 1 cut(s) 2305
SinI GGWCC 3 cut(s) 977, 1759, 2331
SmiMI CAYNNNNRTG 3 cut(s) 593, 1667, 3081
SmlI CTYRAG 6 cut(s) 152, 1795, 1825, 2000, 2105, 2771
SmoI CTYRAG 6 cut(s) 152, 1795, 1825, 2000, 2105, 2771
SphI GCATGC 1 cut(s) 679
SseBI AGGCCT 2 cut(s) 175, 1773
SsiI CCGC 6 cut(s) 76, 638, 679, 886, 2411, 2482
SspI AATATT 4 cut(s) 475, 763, 1374, 3058
SspMI CTAG 5 cut(s) 204, 791, 1433, 1475, 2840
SstI GAGCTC 1 cut(s) 372
StuI AGGCCT 2 cut(s) 175, 1773
StyD4I CCNGG 6 cut(s) 443, 979, 1579, 3046, 3321, 3436
StyI CCWWGG 4 cut(s) 670, 1657, 2053, 2327
TaaI ACNGT 5 cut(s) 700, 1515, 1566, 2423, 3398
TaiI ACGT 5 cut(s) 468, 1287, 1591, 2212, 2633
TaqI TCGA 3 cut(s) 1806, 2355, 3204
TaqII GACCGA 1 cut(s) 756
TatI WGTACW 3 cut(s) 2861, 3115, 3166
TscAI CASTG 6 cut(s) 379, 1086, 1228, 2874, 3529, 3598
TseFI GTSAC 3 cut(s) 347, 1420, 2704
TseI GCWGC 2 cut(s) 188, 869
Tsp45I GTSAC 3 cut(s) 347, 1420, 2704
TspGWI ACGGA 4 cut(s) 544, 1167, 2973, 3455
TspRI CASTG 6 cut(s) 379, 1086, 1228, 2874, 3529, 3598
Van91I CCANNNNNTGG 2 cut(s) 1663, 3187
Vha464I CTTAAG 1 cut(s) 1825
VpaK11BI GGWCC 3 cut(s) 977, 1759, 2331
VspI ATTAAT 1 cut(s) 2150
XagI CCTNNNNNAGG 1 cut(s) 3002
XbaI TCTAGA 1 cut(s) 203
XceI RCATGY 1 cut(s) 679
XcmI CCANNNNNNNNNTGG 3 cut(s) 1687, 2051, 3083
XmiI GTMKAC 2 cut(s) 560, 2836
XmnI GAANNNNTTC 6 cut(s) 598, 810, 1554, 1648, 2993, 3030
XspI CTAG 5 cut(s) 204, 791, 1433, 1475, 2840
ZraI GACGTC 1 cut(s) 466
Zsp2I ATGCAT 3 cut(s) 287, 1524, 2890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.