Rorug02G0096700

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000105
Physical Location & Seq
Reverse (-)
7952944 .. 7953881
938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0096700.1

Sequence Viewer

Length: 597 bp
ATGCGTTTCACTCTCCTCCCTCTCCTCCTCCTCCTCCTCCTTCTCTCATACTCCGCCGCCGCACGTAAACTAAGCTCCCACAACGCCACCACCTCCTCCCACCTCGTCCGTACGTCATGCCAACACGCCAGCTACCCCAACCTCTGCCTCCACACGCTCTCCGCCTCCCCGGCCCAGACCCCTCGCGACCTGGCCCAGGCTGCCGTCGGCGTCTCCCTCTCACGCGCCCGTAAAGTCTCCGCCTTCCTCTCCCAGCTCTCCCATTCCTCCTCCTCCTCCTCCACCCCGAAGCGGCAGCGCGTGGCGGTCGGCGACTGCGTGGAGCAGGTCTCGGACTCCGTCGACGAGCTGAGCCGCACGCTGGAGGAGCTCCACCACCTGCACGAGGAGACGTTCCGGTGGCAGATGAGCAACGCCCAGACGTGGGTCAGCGCCGCCCTCACGAACGACGACACGTGTCTCGACGGGTTCCAGGAGGTCGACGGCAAGGTGAAGGCGGACGTCAAGAAGAAGATTACCAATGCTGCTAGGGTTACCAGTAACGCGCTCTACATGATCAACCGGCTCGACGAGAGCCGCGGACGGCCCAGATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

198

Amino Acids

21.78

Weight (kDa)

9.21

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 35 - 185 1.4e-43 Plant invertase/pectin methylesterase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 387
AatII GACGTC 1 cut(s) 504
Acc36I ACCTGC 2 cut(s) 316, 387
AccI GTMKAC 2 cut(s) 342, 480
AccII CGCG 5 cut(s) 186, 225, 300, 545, 579
AcvI CACGTG 1 cut(s) 456
AcyI GRCGYC 2 cut(s) 210, 501
AfaI GTAC 1 cut(s) 112
AfiI CCNNNNNNNGG 6 cut(s) 196, 291, 361, 385, 423, 424
AflIII ACRYGT 2 cut(s) 453, 455
AjiI CACGTC 1 cut(s) 423
AjnI CCWGG 3 cut(s) 189, 195, 471
AluBI AGCT 5 cut(s) 75, 132, 256, 349, 370
AluI AGCT 5 cut(s) 75, 132, 256, 349, 370
Alw21I GWGCWC 1 cut(s) 372
Alw26I GTCTC 5 cut(s) 217, 241, 334, 383, 464
AoxI GGCC 3 cut(s) 171, 192, 584
ApeKI GCWGC 3 cut(s) 200, 295, 524
AspLEI GCGC 4 cut(s) 227, 300, 434, 547
AspS9I GGNCC 3 cut(s) 172, 193, 585
AsuC2I CCSGG 1 cut(s) 170
AsuHPI GGTGA 1 cut(s) 502
BanII GRGCYC 1 cut(s) 372
BauI CACGAG 1 cut(s) 383
BbrPI CACGTG 1 cut(s) 456
Bbv12I GWGCWC 1 cut(s) 372
BbvI GCAGC 3 cut(s) 187, 307, 511
BceAI ACGGC 2 cut(s) 188, 499
BciT130I CCWGG 3 cut(s) 191, 197, 473
BclI TGATCA 1 cut(s) 555
BcnI CCSGG 1 cut(s) 170
BcoDI GTCTC 5 cut(s) 217, 241, 334, 383, 464
BfaI CTAG 1 cut(s) 528
BfoI RGCGCY 1 cut(s) 435
BfuAI ACCTGC 2 cut(s) 316, 387
BglI GCCNNNNNGGC 1 cut(s) 170
BglII AGATCT 1 cut(s) 590
BisI GCNGC 9 cut(s) 57, 60, 201, 293, 296, 355, 435, 525, 577
BlpI GCTNAGC 1 cut(s) 350
BlsI GCNGC 9 cut(s) 58, 61, 202, 294, 297, 356, 436, 526, 578
Bme1390I CCNGG 4 cut(s) 170, 191, 197, 473
BmgBI CACGTC 1 cut(s) 423
BmgT120I GGNCC 3 cut(s) 172, 193, 585
BmiI GGNNCC 1 cut(s) 470
BmrFI CCNGG 4 cut(s) 170, 191, 197, 473
BoxI GACNNNNGTC 2 cut(s) 425, 456
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BpmI CTGGAG 1 cut(s) 383
Bpu1102I GCTNAGC 1 cut(s) 350
BpuMI CCSGG 1 cut(s) 170
BsaAI YACGTR 2 cut(s) 65, 456
BsaHI GRCGYC 2 cut(s) 210, 501
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 3 cut(s) 168, 195, 577
BsaWI WCCGGW 1 cut(s) 396
BsaXI ACNNNNNCTCC 2 cut(s) 143, 173
Bsc4I CCNNNNNNNGG 6 cut(s) 196, 291, 361, 385, 423, 424
Bse118I RCCGGY 1 cut(s) 561
Bse1I ACTGG 1 cut(s) 537
BseBI CCWGG 3 cut(s) 191, 197, 473
BseDI CCNNGG 3 cut(s) 168, 195, 577
BseLI CCNNNNNNNGG 6 cut(s) 196, 291, 361, 385, 423, 424
BseMII CTCAG 1 cut(s) 341
BseNI ACTGG 1 cut(s) 537
BseXI GCAGC 3 cut(s) 187, 307, 511
BseYI CCCAGC 1 cut(s) 252
BsgI GTGCAG 1 cut(s) 365
Bsh1236I CGCG 5 cut(s) 186, 225, 300, 545, 579
Bsh1285I CGRYCG 1 cut(s) 309
BshFI GGCC 3 cut(s) 173, 194, 586
BsiEI CGRYCG 1 cut(s) 309
BsiHKAI GWGCWC 1 cut(s) 372
BsiSI CCGG 3 cut(s) 170, 397, 562
BsiWI CGTACG 1 cut(s) 110
BslI CCNNNNNNNGG 6 cut(s) 196, 291, 361, 385, 423, 424
BsmAI GTCTC 5 cut(s) 217, 241, 334, 383, 464
BsmBI CGTCTC 2 cut(s) 217, 383
BsnI GGCC 3 cut(s) 173, 194, 586
Bso31I GGTCTC 1 cut(s) 334
Bsp1286I GDGCHC 1 cut(s) 372
Bsp143I GATC 2 cut(s) 555, 590
Bsp1720I GCTNAGC 1 cut(s) 350
Bsp68I TCGCGA 1 cut(s) 186
BspANI GGCC 3 cut(s) 173, 194, 586
BspCNI CTCAG 1 cut(s) 342
BspFNI CGCG 5 cut(s) 186, 225, 300, 545, 579
BspLI GGNNCC 1 cut(s) 470
BspMI ACCTGC 2 cut(s) 316, 387
BspTNI GGTCTC 1 cut(s) 334
BsrFI RCCGGY 1 cut(s) 561
BsrI ACTGG 1 cut(s) 537
BssAI RCCGGY 1 cut(s) 561
BssECI CCNNGG 3 cut(s) 168, 195, 577
BssMI GATC 2 cut(s) 555, 590
BssNI GRCGYC 2 cut(s) 210, 501
BssSI CACGAG 1 cut(s) 383
Bst2BI CACGAG 1 cut(s) 383
Bst2UI CCWGG 3 cut(s) 191, 197, 473
BstACI GRCGYC 2 cut(s) 210, 501
BstBAI YACGTR 2 cut(s) 65, 456
BstC8I GCNNGC 2 cut(s) 130, 359
BstDEI CTNAG 3 cut(s) 71, 350, 594
BstDSI CCRYGG 1 cut(s) 577
BstEII GGTNACC 1 cut(s) 532
BstENI CCTNNNNNAGG 2 cut(s) 194, 383
BstFNI CGCG 5 cut(s) 186, 225, 300, 545, 579
BstH2I RGCGCY 1 cut(s) 435
BstHHI GCGC 4 cut(s) 227, 300, 434, 547
BstKTI GATC 2 cut(s) 558, 593
BstMAI GTCTC 5 cut(s) 217, 241, 334, 383, 464
BstMBI GATC 2 cut(s) 555, 590
BstMCI CGRYCG 1 cut(s) 309
BstMWI GCNNNNNNNGC 3 cut(s) 170, 200, 367
BstNI CCWGG 3 cut(s) 191, 197, 473
BstPAI GACNNNNGTC 2 cut(s) 425, 456
BstPI GGTNACC 1 cut(s) 532
BstSCI CCNGG 4 cut(s) 168, 189, 195, 471
BstUI CGCG 5 cut(s) 186, 225, 300, 545, 579
BstV1I GCAGC 3 cut(s) 187, 307, 511
BstX2I RGATCY 1 cut(s) 590
BstYI RGATCY 1 cut(s) 590
BsuRI GGCC 3 cut(s) 173, 194, 586
BtgI CCRYGG 1 cut(s) 577
BtrI CACGTC 1 cut(s) 423
BtuMI TCGCGA 1 cut(s) 186
BveI ACCTGC 2 cut(s) 316, 387
Cac8I GCNNGC 2 cut(s) 130, 359
CfoI GCGC 4 cut(s) 227, 300, 434, 547
Cfr10I RCCGGY 1 cut(s) 561
Cfr13I GGNCC 3 cut(s) 172, 193, 585
Cfr42I CCGCGG 1 cut(s) 580
CseI GACGC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 111
CviAII CATG 2 cut(s) 117, 553
CviQI GTAC 1 cut(s) 111
DdeI CTNAG 3 cut(s) 71, 350, 594
DpnI GATC 2 cut(s) 557, 592
DpnII GATC 2 cut(s) 555, 590
EciI GGCGGA 4 cut(s) 43, 151, 229, 512
Ecl136II GAGCTC 1 cut(s) 370
Eco24I GRGCYC 1 cut(s) 372
Eco31I GGTCTC 1 cut(s) 334
Eco53kI GAGCTC 1 cut(s) 370
Eco72I CACGTG 1 cut(s) 456
Eco91I GGTNACC 1 cut(s) 532
EcoICRI GAGCTC 1 cut(s) 370
EcoNI CCTNNNNNAGG 2 cut(s) 194, 383
EcoO65I GGTNACC 1 cut(s) 532
EcoRII CCWGG 3 cut(s) 189, 195, 471
EcoT38I GRGCYC 1 cut(s) 372
Esp3I CGTCTC 2 cut(s) 217, 383
FaeI CATG 2 cut(s) 120, 556
FaiI YATR 3 cut(s) 49, 118, 554
FatI CATG 2 cut(s) 116, 552
FbaI TGATCA 1 cut(s) 555
FblI GTMKAC 2 cut(s) 342, 480
Fnu4HI GCNGC 9 cut(s) 57, 60, 201, 293, 296, 355, 435, 525, 577
FriOI GRGCYC 1 cut(s) 372
Fsp4HI GCNGC 9 cut(s) 57, 60, 201, 293, 296, 355, 435, 525, 577
FspBI CTAG 1 cut(s) 528
GlaI GCGC 4 cut(s) 226, 299, 433, 546
GluI GCNGC 9 cut(s) 57, 60, 201, 293, 296, 355, 435, 525, 577
GsaI CCCAGC 1 cut(s) 256
GsuI CTGGAG 1 cut(s) 383
HaeII RGCGCY 1 cut(s) 435
HaeIII GGCC 3 cut(s) 173, 194, 586
HapII CCGG 3 cut(s) 170, 397, 562
HgaI GACGC 1 cut(s) 199
HhaI GCGC 4 cut(s) 227, 300, 434, 547
Hin1I GRCGYC 2 cut(s) 210, 501
Hin1II CATG 2 cut(s) 120, 556
Hin6I GCGC 4 cut(s) 225, 298, 432, 545
HinP1I GCGC 4 cut(s) 225, 298, 432, 545
HincII GTYRAC 2 cut(s) 343, 481
HindII GTYRAC 2 cut(s) 343, 481
HinfI GANTC 1 cut(s) 335
HpaII CCGG 3 cut(s) 170, 397, 562
HphI GGTGA 1 cut(s) 502
Hpy166II GTNNAC 3 cut(s) 68, 343, 481
Hpy188I TCNGA 1 cut(s) 334
Hpy188III TCNNGA 4 cut(s) 185, 442, 461, 505
Hpy8I GTNNAC 3 cut(s) 68, 343, 481
Hpy99I CGWCG 7 cut(s) 209, 344, 347, 452, 467, 485, 572
HpyAV CCTTC 3 cut(s) 50, 253, 487
HpyCH4IV ACGT 6 cut(s) 64, 113, 392, 422, 455, 501
HpyCH4V TGCA 1 cut(s) 382
HpyF10VI GCNNNNNNNGC 3 cut(s) 170, 200, 367
HpyF3I CTNAG 3 cut(s) 71, 350, 594
HpySE526I ACGT 6 cut(s) 64, 113, 392, 422, 455, 501
Hsp92I GRCGYC 2 cut(s) 210, 501
Hsp92II CATG 2 cut(s) 120, 556
HspAI GCGC 4 cut(s) 225, 298, 432, 545
Ksp22I TGATCA 1 cut(s) 555
KspI CCGCGG 1 cut(s) 580
Kzo9I GATC 2 cut(s) 555, 590
LmnI GCTCC 4 cut(s) 80, 322, 367, 375
Lsp1109I GCAGC 3 cut(s) 187, 307, 511
MaeI CTAG 1 cut(s) 528
MaeII ACGT 6 cut(s) 64, 113, 392, 422, 455, 501
MaeIII GTNAC 2 cut(s) 532, 539
MalI GATC 2 cut(s) 557, 592
MboI GATC 2 cut(s) 555, 590
MboII GAAGA 2 cut(s) 520, 523
MflI RGATCY 1 cut(s) 590
MhlI GDGCHC 1 cut(s) 372
MlyI GAGTC 1 cut(s) 329
MspA1I CMGCKG 1 cut(s) 579
MspI CCGG 3 cut(s) 170, 397, 562
MspR9I CCNGG 4 cut(s) 170, 191, 197, 473
MvaI CCWGG 3 cut(s) 191, 197, 473
MvnI CGCG 5 cut(s) 186, 225, 300, 545, 579
MwoI GCNNNNNNNGC 3 cut(s) 170, 200, 367
NciI CCSGG 1 cut(s) 170
NdeII GATC 2 cut(s) 555, 590
NlaIII CATG 2 cut(s) 120, 556
NlaIV GGNNCC 1 cut(s) 470
NruI TCGCGA 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 387
PcsI WCGNNNNNNNCGW 1 cut(s) 315
Pfl23II CGTACG 1 cut(s) 110
PflFI GACNNNGTC 1 cut(s) 338
PfoI TCCNGGA 1 cut(s) 471
PkrI GCNGC 9 cut(s) 58, 61, 202, 294, 297, 356, 436, 526, 578
PleI GAGTC 1 cut(s) 329
PmaCI CACGTG 1 cut(s) 456
PmlI CACGTG 1 cut(s) 456
PpsI GAGTC 1 cut(s) 329
Ppu21I YACGTR 2 cut(s) 65, 456
PshAI GACNNNNGTC 2 cut(s) 425, 456
Psp124BI GAGCTC 1 cut(s) 372
Psp6I CCWGG 3 cut(s) 189, 195, 471
PspCI CACGTG 1 cut(s) 456
PspEI GGTNACC 1 cut(s) 532
PspFI CCCAGC 1 cut(s) 252
PspGI CCWGG 3 cut(s) 189, 195, 471
PspLI CGTACG 1 cut(s) 110
PspN4I GGNNCC 1 cut(s) 470
PspPI GGNCC 3 cut(s) 172, 193, 585
PsuI RGATCY 1 cut(s) 590
PsyI GACNNNGTC 1 cut(s) 338
RruI TCGCGA 1 cut(s) 186
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
SacI GAGCTC 1 cut(s) 372
SacII CCGCGG 1 cut(s) 580
SalI GTCGAC 2 cut(s) 341, 479
SatI GCNGC 9 cut(s) 57, 60, 201, 293, 296, 355, 435, 525, 577
Sau3AI GATC 2 cut(s) 555, 590
Sau96I GGNCC 3 cut(s) 172, 193, 585
SchI GAGTC 1 cut(s) 329
ScrFI CCNGG 4 cut(s) 170, 191, 197, 473
SduI GDGCHC 1 cut(s) 372
Sfr303I CCGCGG 1 cut(s) 580
SgrBI CCGCGG 1 cut(s) 580
SgrDI CGTCGACG 1 cut(s) 341
SspMI CTAG 1 cut(s) 528
SstI GAGCTC 1 cut(s) 372
StyD4I CCNGG 4 cut(s) 168, 189, 195, 471
TaiI ACGT 6 cut(s) 67, 116, 395, 425, 458, 504
TaqI TCGA 4 cut(s) 342, 462, 480, 567
TauI GCSGC 6 cut(s) 59, 62, 295, 357, 437, 579
TseI GCWGC 3 cut(s) 200, 295, 524
TspGWI ACGGA 2 cut(s) 98, 328
Tth111I GACNNNGTC 1 cut(s) 338
XagI CCTNNNNNAGG 2 cut(s) 194, 383
XmiI GTMKAC 2 cut(s) 342, 480
XspI CTAG 1 cut(s) 528
ZraI GACGTC 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.