RLG00000013892

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000105
Physical Location & Seq
Reverse (-)
43644088 .. 43651559
7472 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013892

Sequence Viewer

Length: 1482 bp
ATGAAGAAGTTTATAGGAAGAGTGAGGGACAGACAAAATGCGTGGAGAGCTGCTTTGACTGAGGTAGCCAATCTTTCTGGCTGGGATTTCAAGAATTATTCAACTGTAACAAAACTAATTGAGGAAATTGCTAATCATATGCTAAAGAAGTCCGTGTATGCATCTCCAAGTGTTGACAAGGGCTTCATCGGAATGGATTCCCGCATTCATGACTTATTAAGAAATTACATACGTCCGCAGCTTGGTGGGGTGCGTTTTATAGGGATCCATGGCATGCGGGGCATAGGTAAGACAACACTTGCTCGAGCTATCCATGATGAAATTTGTCAGGATTTTTACCGAACCTGCTTTCTTTCCAATGTTAGAGAAACGTCCAAAAACAATGGCCTAGTTTCTCTACAAGAAAAACTTCTTTCCATAATCCAGAAGGCTAAAGTTGAAAATATAGAGGATGAATACACAGGAGCTGCTATGATAGAAAGGCGGTTGGGTAGAATGAAGGTGCTTGTTGTTATTGATGATGTGGATCAGTTGACACAATTAGAGATATTGGCTGGAAGTCGCAACTGGTTTGGTCCAGGGAGTAGAATTATCATAACCACCACAGATGTTCAGTTGTTAAAGGCTCATGGTGTTGATGCTACATACAAGGCTGACGGGTTAAACTGTGATGAAGCACTTCAACTTTTGAGTTTCAAGGCTTTTAAGAAATGTCCCCCACCAGAAGATTATTTGCATCTGTGCTACCATATTTTAGGGTATGCTCAGGGGCTTCCGTTGGCTCTTGTGGTTTTAGGTTCTTTTCTATTTGGTCGAAGCGCTGATGAATGGGCAAGTGCAATAGATAGGCTAAAGTACACACCACTTAAACCCATTACTGAGGTGCTTCGGATTAGTTTTGATGGACTGGACAAAAAAGACAAAGAAATATTCCTACATATCGCTTGCTTTTACAAGGGGAAGGATAAGGATCGTGTGACACAAATACTAGACTATTGCCAGCTAAACCCTGTCATTGGTTTAAGTGTTCTTGCTGATAGATCTCTCATAACTATCTCCAACAACGAACTGTCGATGCATGATTTGCTACAAGACACGGGCTGGGAAATTGTTCGTGAACAGTCTCCTACAGATCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCAACAATGTGCTGAAGAATAATAAGGGAACAGATTCAATCCAAGGCATGCCTGCTCAAATTTCAAAGGCAGAAGGTGGCCATCTTCCCCTTGAAGAGATGCGTACACATCTGCGGAGTGAGTATCCTTGGAAGAATAAAAGGAAACTTTGTGAATCTTCATTGCTGAAAAGGAAAAGGATTATGGGACATGGAAACCAGATCATAGGGGAAGATGCTGGTGCAATTCATCTCCCAAATCCAATGAATGGGTTTGGGACTCCAGCTGATCTCTGTCAAATCCACAGAAGTCTTCCAGAGGCAGCCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

494

Amino Acids

55.52

Weight (kDa)

8.77

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 10 - 57 5.8e-07 TIR domain
NB-ARC PF00931 83 - 237 3.5e-17 NB-ARC domain
AAA_22 PF13401 85 - 185 2.7e-07 AAA domain
NACHT PF05729 87 - 181 1.1e-06 NACHT domain
WHD_ROQ1 PF23282 305 - 375 9e-23 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 353
AccB7I CCANNNNNTGG 1 cut(s) 1418
AciI CCGC 5 cut(s) 202, 236, 277, 484, 1285
AclWI GGATC 5 cut(s) 259, 272, 534, 978, 1127
AcoI YGGCCR 1 cut(s) 1249
AcsI RAATTY 2 cut(s) 321, 1230
AcuI CTGAAG 1 cut(s) 1205
AfaI GTAC 2 cut(s) 857, 1276
AfeI AGCGCT 1 cut(s) 820
AfiI CCNNNNNNNGG 3 cut(s) 242, 1016, 1418
AgsI TTSAA 8 cut(s) 91, 102, 440, 683, 697, 1209, 1236, 1265
AjnI CCWGG 2 cut(s) 577, 1135
AluBI AGCT 6 cut(s) 50, 241, 308, 467, 1003, 1436
AluI AGCT 6 cut(s) 50, 241, 308, 467, 1003, 1436
Alw26I GTCTC 2 cut(s) 1128, 1164
AlwI GGATC 5 cut(s) 259, 272, 534, 978, 1127
AlwNI CAGNNNCTG 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 820
AoxI GGCC 2 cut(s) 385, 1249
ApeKI GCWGC 4 cut(s) 50, 238, 467, 1472
ApoI RAATTY 2 cut(s) 321, 1230
Asp700I GAANNNNTTC 5 cut(s) 196, 408, 678, 1110, 1204
AspLEI GCGC 1 cut(s) 821
AspS9I GGNCC 1 cut(s) 575
AvaI CYCGRG 1 cut(s) 303
AvaII GGWCC 1 cut(s) 575
BalI TGGCCA 1 cut(s) 1251
BamHI GGATCC 1 cut(s) 264
BbsI GAAGAC 2 cut(s) 1173, 1454
BbvI GCAGC 3 cut(s) 37, 250, 454
BccI CCATC 2 cut(s) 896, 1260
BciT130I CCWGG 2 cut(s) 579, 1137
BciVI GTATCC 1 cut(s) 1305
BcoDI GTCTC 2 cut(s) 1128, 1164
BfaI CTAG 2 cut(s) 389, 989
BfmI CTRYAG 1 cut(s) 1128
BfoI RGCGCY 1 cut(s) 822
BfuAI ACCTGC 1 cut(s) 353
BfuI GTATCC 1 cut(s) 1305
BglII AGATCT 1 cut(s) 1040
BisI GCNGC 4 cut(s) 51, 239, 468, 1473
BlsI GCNGC 4 cut(s) 52, 240, 469, 1474
Bme1390I CCNGG 2 cut(s) 579, 1137
Bme18I GGWCC 1 cut(s) 575
BmeT110I CYCGRG 1 cut(s) 303
BmgT120I GGNCC 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 266
BmrFI CCNGG 2 cut(s) 579, 1137
BmsI GCATC 6 cut(s) 170, 628, 745, 1065, 1260, 1375
BpiI GAAGAC 2 cut(s) 1173, 1454
BpmI CTGGAG 1 cut(s) 1416
Bpu10I CCTNAGC 1 cut(s) 765
BsaBI GATNNNNATC 2 cut(s) 525, 969
BsaI GGTCTC 1 cut(s) 1164
BsaJI CCNNGG 4 cut(s) 268, 578, 1213, 1298
Bsc4I CCNNNNNNNGG 3 cut(s) 242, 1016, 1418
Bse1I ACTGG 2 cut(s) 572, 912
Bse3DI GCAATG 1 cut(s) 1331
Bse8I GATNNNNATC 2 cut(s) 525, 969
BseBI CCWGG 2 cut(s) 579, 1137
BseDI CCNNGG 4 cut(s) 268, 578, 1213, 1298
BseGI GGATG 1 cut(s) 457
BseJI GATNNNNATC 2 cut(s) 525, 969
BseLI CCNNNNNNNGG 3 cut(s) 242, 1016, 1418
BseMI GCAATG 1 cut(s) 1331
BseMII CTCAG 3 cut(s) 51, 779, 870
BseNI ACTGG 2 cut(s) 572, 912
BseXI GCAGC 3 cut(s) 37, 250, 454
BseYI CCCAGC 2 cut(s) 81, 1101
BshFI GGCC 2 cut(s) 387, 1251
BsiHKCI CYCGRG 1 cut(s) 303
BslFI GGGAC 4 cut(s) 41, 699, 1371, 1441
BslI CCNNNNNNNGG 3 cut(s) 242, 1016, 1418
BsmAI GTCTC 2 cut(s) 1128, 1164
BsmFI GGGAC 4 cut(s) 41, 699, 1371, 1441
BsmI GAATGC 1 cut(s) 204
BsnI GGCC 2 cut(s) 387, 1251
Bso31I GGTCTC 1 cut(s) 1164
BsoBI CYCGRG 1 cut(s) 303
Bsp143I GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
Bsp19I CCATGG 1 cut(s) 268
BspACI CCGC 5 cut(s) 202, 236, 277, 484, 1285
BspANI GGCC 2 cut(s) 387, 1251
BspCNI CTCAG 3 cut(s) 52, 778, 871
BspHI TCATGA 2 cut(s) 208, 1162
BspLI GGNNCC 1 cut(s) 266
BspMI ACCTGC 1 cut(s) 353
BspPI GGATC 5 cut(s) 259, 272, 534, 978, 1127
BspTNI GGTCTC 1 cut(s) 1164
BsrDI GCAATG 1 cut(s) 1331
BsrI ACTGG 2 cut(s) 572, 912
BssECI CCNNGG 4 cut(s) 268, 578, 1213, 1298
BssMI GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
BssT1I CCWWGG 3 cut(s) 268, 1213, 1298
Bst2UI CCWGG 2 cut(s) 579, 1137
Bst4CI ACNGT 4 cut(s) 106, 668, 1071, 1122
Bst6I CTCTTC 2 cut(s) 13, 1260
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstC8I GCNNGC 5 cut(s) 275, 946, 1001, 1220, 1224
BstDEI CTNAG 3 cut(s) 60, 765, 879
BstDSI CCRYGG 1 cut(s) 268
BstF5I GGATG 1 cut(s) 457
BstH2I RGCGCY 1 cut(s) 822
BstHHI GCGC 1 cut(s) 821
BstKTI GATC 7 cut(s) 267, 529, 973, 1043, 1135, 1374, 1441
BstMAI GTCTC 2 cut(s) 1128, 1164
BstMBI GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
BstMWI GCNNNNNNNGC 3 cut(s) 47, 279, 1084
BstNI CCWGG 2 cut(s) 579, 1137
BstNSI RCATGY 2 cut(s) 277, 1222
BstSCI CCNGG 2 cut(s) 577, 1135
BstSFI CTRYAG 1 cut(s) 1128
BstV1I GCAGC 3 cut(s) 37, 250, 454
BstV2I GAAGAC 2 cut(s) 1173, 1454
BstX2I RGATCY 3 cut(s) 264, 1040, 1132
BstYI RGATCY 3 cut(s) 264, 1040, 1132
BsuI GTATCC 1 cut(s) 1305
BsuRI GGCC 2 cut(s) 387, 1251
BtgI CCRYGG 1 cut(s) 268
BtsCI GGATG 1 cut(s) 457
BveI ACCTGC 1 cut(s) 353
Cac8I GCNNGC 5 cut(s) 275, 946, 1001, 1220, 1224
CaiI CAGNNNCTG 1 cut(s) 467
CciI TCATGA 2 cut(s) 208, 1162
CfoI GCGC 1 cut(s) 821
Cfr13I GGNCC 1 cut(s) 575
Csp6I GTAC 2 cut(s) 856, 1275
CspCI CAANNNNNGTGG 2 cut(s) 23, 58
CviQI GTAC 2 cut(s) 856, 1275
DdeI CTNAG 3 cut(s) 60, 765, 879
DpnI GATC 7 cut(s) 266, 528, 972, 1042, 1134, 1373, 1440
DpnII GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
EaeI YGGCCR 1 cut(s) 1249
Eam1104I CTCTTC 2 cut(s) 13, 1260
EarI CTCTTC 2 cut(s) 13, 1260
Eco130I CCWWGG 3 cut(s) 268, 1213, 1298
Eco31I GGTCTC 1 cut(s) 1164
Eco47I GGWCC 1 cut(s) 575
Eco47III AGCGCT 1 cut(s) 820
Eco57I CTGAAG 1 cut(s) 1205
Eco88I CYCGRG 1 cut(s) 303
EcoRII CCWGG 2 cut(s) 577, 1135
EcoT14I CCWWGG 3 cut(s) 268, 1213, 1298
EcoT22I ATGCAT 2 cut(s) 163, 1080
ErhI CCWWGG 3 cut(s) 268, 1213, 1298
FalI AAGNNNNNCTT 2 cut(s) 393, 425
FaqI GGGAC 4 cut(s) 41, 699, 1371, 1441
FauI CCCGC 2 cut(s) 209, 270
FauNDI CATATG 1 cut(s) 138
Fnu4HI GCNGC 4 cut(s) 51, 239, 468, 1473
FokI GGATG 1 cut(s) 464
Fsp4HI GCNGC 4 cut(s) 51, 239, 468, 1473
FspBI CTAG 2 cut(s) 389, 989
GlaI GCGC 1 cut(s) 820
GluI GCNGC 4 cut(s) 51, 239, 468, 1473
GsaI CCCAGC 2 cut(s) 85, 1105
GsuI CTGGAG 1 cut(s) 1416
HaeII RGCGCY 1 cut(s) 822
HaeIII GGCC 2 cut(s) 387, 1251
HhaI GCGC 1 cut(s) 821
Hin6I GCGC 1 cut(s) 819
HinP1I GCGC 1 cut(s) 819
HincII GTYRAC 2 cut(s) 175, 534
HindII GTYRAC 2 cut(s) 175, 534
HinfI GANTC 4 cut(s) 197, 1205, 1325, 1429
Hpy166II GTNNAC 5 cut(s) 175, 534, 858, 1118, 1277
Hpy188I TCNGA 2 cut(s) 191, 891
Hpy188III TCNNGA 7 cut(s) 91, 209, 329, 424, 1115, 1163, 1466
Hpy8I GTNNAC 5 cut(s) 175, 534, 858, 1118, 1277
HpyAV CCTTC 4 cut(s) 421, 493, 955, 1238
HpyCH4III ACNGT 4 cut(s) 106, 668, 1071, 1122
HpyCH4IV ACGT 3 cut(s) 232, 371, 1144
HpyCH4V TGCA 5 cut(s) 161, 736, 839, 1078, 1394
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 279, 1084
HpyF3I CTNAG 3 cut(s) 60, 765, 879
HpySE526I ACGT 3 cut(s) 232, 371, 1144
HspAI GCGC 1 cut(s) 819
Kzo9I GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
LmnI GCTCC 1 cut(s) 464
Lsp1109I GCAGC 3 cut(s) 37, 250, 454
LweI GCATC 6 cut(s) 170, 628, 745, 1065, 1260, 1375
MaeI CTAG 2 cut(s) 389, 989
MaeII ACGT 3 cut(s) 232, 371, 1144
MaeIII GTNAC 2 cut(s) 106, 976
MalI GATC 7 cut(s) 266, 528, 972, 1042, 1134, 1373, 1440
MboI GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
MflI RGATCY 3 cut(s) 264, 1040, 1132
MlsI TGGCCA 1 cut(s) 1251
MluNI TGGCCA 1 cut(s) 1251
MlyI GAGTC 1 cut(s) 1423
MmeI TCCRAC 1 cut(s) 1083
MnlI CCTC 6 cut(s) 18, 55, 115, 442, 874, 1462
Mox20I TGGCCA 1 cut(s) 1251
Mph1103I ATGCAT 2 cut(s) 163, 1080
MroXI GAANNNNTTC 5 cut(s) 196, 408, 678, 1110, 1204
MscI TGGCCA 1 cut(s) 1251
MseI TTAA 6 cut(s) 218, 620, 662, 705, 867, 1022
MslI CAYNNNNRTG 1 cut(s) 191
Msp20I TGGCCA 1 cut(s) 1251
MspA1I CMGCKG 1 cut(s) 1436
MspR9I CCNGG 2 cut(s) 579, 1137
Mva1269I GAATGC 1 cut(s) 204
MvaI CCWGG 2 cut(s) 579, 1137
MwoI GCNNNNNNNGC 3 cut(s) 47, 279, 1084
NcoI CCATGG 1 cut(s) 268
NdeI CATATG 1 cut(s) 138
NdeII GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
NlaIV GGNNCC 1 cut(s) 266
NmuCI GTSAC 1 cut(s) 976
NsiI ATGCAT 2 cut(s) 163, 1080
NspI RCATGY 2 cut(s) 277, 1222
PaeI GCATGC 2 cut(s) 277, 1222
PaeR7I CTCGAG 1 cut(s) 303
PagI TCATGA 2 cut(s) 208, 1162
PctI GAATGC 1 cut(s) 204
PdmI GAANNNNTTC 5 cut(s) 196, 408, 678, 1110, 1204
PfeI GAWTC 3 cut(s) 197, 1205, 1325
PflMI CCANNNNNTGG 1 cut(s) 1418
PkrI GCNGC 4 cut(s) 52, 240, 469, 1474
PleI GAGTC 1 cut(s) 1423
PpsI GAGTC 1 cut(s) 1423
Psp6I CCWGG 2 cut(s) 577, 1135
PspFI CCCAGC 2 cut(s) 81, 1101
PspGI CCWGG 2 cut(s) 577, 1135
PspN4I GGNNCC 1 cut(s) 266
PspPI GGNCC 1 cut(s) 575
PspXI VCTCGAGB 1 cut(s) 303
PstNI CAGNNNCTG 1 cut(s) 467
PsuI RGATCY 3 cut(s) 264, 1040, 1132
PvuII CAGCTG 1 cut(s) 1436
RsaI GTAC 2 cut(s) 857, 1276
RsaNI GTAC 2 cut(s) 856, 1275
RseI CAYNNNNRTG 1 cut(s) 191
SaqAI TTAA 6 cut(s) 218, 620, 662, 705, 867, 1022
SatI GCNGC 4 cut(s) 51, 239, 468, 1473
Sau3AI GATC 7 cut(s) 264, 526, 970, 1040, 1132, 1371, 1438
Sau96I GGNCC 1 cut(s) 575
SchI GAGTC 1 cut(s) 1423
ScrFI CCNGG 2 cut(s) 579, 1137
SfaNI GCATC 6 cut(s) 170, 628, 745, 1065, 1260, 1375
SfcI CTRYAG 1 cut(s) 1128
Sfr274I CTCGAG 1 cut(s) 303
SinI GGWCC 1 cut(s) 575
SlaI CTCGAG 1 cut(s) 303
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
SphI GCATGC 2 cut(s) 277, 1222
SsiI CCGC 5 cut(s) 202, 236, 277, 484, 1285
SspI AATATT 1 cut(s) 930
SspMI CTAG 2 cut(s) 389, 989
StyD4I CCNGG 2 cut(s) 577, 1135
StyI CCWWGG 3 cut(s) 268, 1213, 1298
TaaI ACNGT 4 cut(s) 106, 668, 1071, 1122
TaiI ACGT 3 cut(s) 235, 374, 1147
TaqI TCGA 3 cut(s) 304, 814, 1073
TatI WGTACW 1 cut(s) 855
TfiI GAWTC 3 cut(s) 197, 1205, 1325
Tru1I TTAA 6 cut(s) 218, 620, 662, 705, 867, 1022
Tru9I TTAA 6 cut(s) 218, 620, 662, 705, 867, 1022
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 4 cut(s) 50, 238, 467, 1472
Tsp45I GTSAC 1 cut(s) 976
TspGWI ACGGA 2 cut(s) 142, 765
Van91I CCANNNNNTGG 1 cut(s) 1418
VpaK11BI GGWCC 1 cut(s) 575
XapI RAATTY 2 cut(s) 321, 1230
XceI RCATGY 2 cut(s) 277, 1222
XhoI CTCGAG 1 cut(s) 303
XmnI GAANNNNTTC 5 cut(s) 196, 408, 678, 1110, 1204
XspI CTAG 2 cut(s) 389, 989
Zsp2I ATGCAT 2 cut(s) 163, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.