RLG00000015536

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000105
Physical Location & Seq
Reverse (-)
67621837 .. 67626275
4439 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015536

Sequence Viewer

Length: 2961 bp
ATGTCGTCAACACCCTCTTCTTCTTCTACTCCTCCTCGTCGATGGAAGTATGATGTTTTTCTTAGTTTCAGAGGAGAAGACACCCGCTTGAATTTTGTGGACCATCTGTATGCTGCATTAGGTCAGAAAGGAATTGTCACCTTTAGAGATGACAAAAGTCTTGAGAGAGGAAAATCCATTTTGTCAGAACTTCTTAAAGCAATTGAGGAGTCAAAATTTGCTCTTGTCATTCTTTCACCAAACTATGCTTCTTCTTCATGGTGCTTAGACGAGCTTTTGAAGATTATTCAATGCAGAGAAGAAATGGGGCAACAAGTCATGCCAGTGTTCTACCAAGTAGATCCATCGCATGTGCGTAAGAACAAGGGATATTTTTTGCAGGCCTTTACAGAACACGAAGAAGTTCATTGGGAGAACAGGGATAAAGTAAGGAAGTGGAGGGCTGCTTTGACAGGCGTGGCCAATCTTTCTGGGTGGGATTTGAGGAACATGCATGAGGCAAAAGCTATCAAGAGTATTGTTAAAGATATACTAAATAAATCACAGTATTCATCTACAAGCGTTTACAAGGGCATGGTAGGAATGGATGTCCGTGTTGATGATTTACTGAGAAATCATATTCGTCCACATTTTGATGACGTGCGCATGATAGGGATCCATGGAATGCGGGGAATAGGTAAGACGGCAATTGCCCGAGCTCTTTATGATCAACTTCGTCAAGATTTTGACAGTAGCTGCGAGCCTTCCAATGTTAGAGAAGTGTTTAGCAAAGGTGGTATATATCCTTCACGGTATGAAATTAGTGACTGTTTTGACCATTGCTGCTTTCTTTCCAACGTTAGAGAAATGTCAAAAAAAGATGGTCTAGTTTCTCTTCAAGAAAAACTTCTTTCCAGAGTCTTGAGGGCAACAATTAGGAACATAGAGGATGAATATGCTGGAGCGAATATGATACAAAGACGATTAGGTAAAGTAAGGGTGCTGGTTGTTATTGATGATGTGGATCAAGTGGCACAATTAGAATGTTTGGCTGGAAATCATGACTGGTTCGGTCCGGGAAGTAGAATTATCATAACCAGTGCTGATGTTCATTTGTTGAATTGTGTGGATACTCTATACGAGGCTGCTGTGTTAACCCATGATGAAGCTCTTCAACTTTTGAGTTTAAAGGCTTTTAAGAAAAACCCCCCGCCTGAAGATTACTTGGAGCTATGCAACAATATTTTAGGGTATGCTCATGGGCTCCCATTAGTTCTTGTGGTTATAGGTCCATTTCTATGTGGTAGATCGATCAATGAATGGAAGAGTGCAATCGATAGGCTCAGGAATAAACCAGAAATTAGCATCGTTGATGTGCTTCAGATAAGTTTTGATGGGCTAAGGGAAACAGAAAAAGAAATTTTCCTACATGTCGCTTGCTTTTATGTGGGGAAGGATAGGGATCGTGTATCAGAAATACTAGATTATTGTCAGCTTTACCCTCACATTGGTTTAAGTGTTCTTGCTGATAAATCTCTCATTACTATTTCCAACAACAAACTATCCATGCATGCTTTGCTACAAGAAATGGGCTGGAAGATAGTTCGTAGGGAGTCGCCTAAACCAGGCAGGCGTACTAGATTATGGTCTCATGAAGACATCCACAATGTGCTGAAAAAAAAAAAGTGTTTTGACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAGAACATTGTCCAGACCCCAGACCTCACAGGCGCTTGCAGTCTTGAGTGTCTAGATCTTGAAGGGTGTAAAAACTTGGTAAAAATCCATCAATCTGTTGGAATTCTCAAAAAGCTTATTGTCTTGAATCTTAAAGACTGTGAGAGTCTGCAGAGTCTACCAGATAGAATTGAAATGGAGTCTCTTAAAACTCTTATTCTTTCTGGGTGTTCCAATATCAAGAAGATTCCTGAGTTTAGCAGAAATATGGAGTGTTTGTCAGAGCTGTGTCTTGATAGGACTGCCATTGAAAAACTGCCCGACTCAATCCAGTACCTATGTGGCCTGTCTTTCTTGGATCTAAGCAACTGCAAGAATCTTTTTTGTCTCCCAAGCACCATTAATAGATTGACAAGTCTTAAAAATATTAATCTTTCAGGATGCCAGAAGCTTGGGGGACCGGATAAAAGTGTGCGGGAGTTGGATTTTTTGCCGGCAAATGTTGCAAGTATAACCCCTGTAACAGAATTACCATCATCGGTCTTCAGCATTTCAGATCATGTTAAAGATTCAAGTTCTCATGGATATGAAGTCATTCAAGAATCATTGTTCGAGTTTTTGCCTTCTGGATTGATGCAAATGGCGTATGAAGAGCCAACGAGTTTCCGGTTGTCTTTATCTGGTCTGGGTAATTTAACAGATCTGAACATAAGTGACTGCAATCTTGATGACAGAGCATTTGTCAACAACTTTGGCTGGTTGCCCTGTTCAGTGGCATTAAATTTGAGTGGAAATGATTTTATTAAGCTTCCTCCAACCATCAGATGGCTTAATAAGCTTGAGAACGTTAACTTGGAGAACTGCAAAAGACTTGAAGACTTGTCAAATCTTCCATCAAATAGTAAGTTGGATGTAAGAGCTGATGGTTGCTCTTCATTGAGAATTTTGTTTGACATATCCAATTACAACAGACTGGAGGAATCATATTTCAGTTTCATCAACTGCTTTAAGCTAAATGAAGACCGAGGCCGCAGTAATATAGCATTTGAAATGCTGAAGATAGTCCTTCATCAGGCTATCTCCACCACAAAGGAAACATTTCAAATTGTATTTCCTGGAAGTGAAATTCCTCGGTGGTTCAAACATCAAAGCCGTAAGGATTCATTGGGTGTATGCATACGACCTCCACGTCCATATTCCAGTAGTTGCTGTGTGTCCGGAACAGGACTTTTTGTTAACCGACCTCTACCCAGAAAGGACCATGTCATGATGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

987

Amino Acids

111.8

Weight (kDa)

7.81

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 193 2.9e-57 TIR domain
TIR_2 PF13676 19 - 116 3.7e-17 TIR domain
NB-ARC PF00931 265 - 395 1.1e-08 NB-ARC domain
WHD_ROQ1 PF23282 462 - 532 1.4e-19 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 604 - 702 3.8e-07 Leucine-rich repeat region
LRR_13 PF23286 628 - 713 2.4e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2871
Acc16I TGCGCA 1 cut(s) 644
AccB7I CCANNNNNTGG 1 cut(s) 2508
AccI GTMKAC 1 cut(s) 1861
AccIII TCCGGA 1 cut(s) 2900
AciI CCGC 5 cut(s) 85, 667, 1190, 2158, 2713
AclI AACGTT 2 cut(s) 837, 2529
AclWI GGATC 6 cut(s) 335, 649, 662, 1011, 1449, 2049
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 7 cut(s) 91, 215, 1398, 1806, 2464, 2625, 2808
AcuI CTGAAG 4 cut(s) 1215, 1343, 2212, 2759
AdeI CACNNNGTG 1 cut(s) 1648
AfaI GTAC 2 cut(s) 1615, 2018
AfiI CCNNNNNNNGG 4 cut(s) 1487, 1604, 2508, 2755
AflIII ACRYGT 1 cut(s) 1408
AjiI CACGTC 2 cut(s) 640, 2873
AjnI CCWGG 2 cut(s) 1603, 2797
AjuI GAANNNNNNNTTGG 4 cut(s) 232, 264, 2519, 2551
Alw21I GWGCWC 1 cut(s) 700
Alw26I GTCTC 3 cut(s) 1632, 1890, 2075
AlwI GGATC 6 cut(s) 335, 649, 662, 1011, 1449, 2049
AlwNI CAGNNNCTG 1 cut(s) 735
Ama87I CYCGRG 1 cut(s) 693
Aor13HI TCCGGA 1 cut(s) 2900
AoxI GGCC 4 cut(s) 381, 459, 2026, 2710
ApeKI GCWGC 5 cut(s) 113, 443, 735, 822, 1124
ApoI RAATTY 7 cut(s) 91, 215, 1398, 1806, 2464, 2625, 2808
ArsI GACNNNNNNTTYG 2 cut(s) 2405, 2437
AseI ATTAAT 2 cut(s) 2085, 2112
Asp700I GAANNNNTTC 5 cut(s) 402, 885, 1149, 2277, 2781
AspLEI GCGC 2 cut(s) 645, 1739
AspS9I GGNCC 5 cut(s) 100, 1052, 1268, 2141, 2941
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 2 cut(s) 130, 228
AvaI CYCGRG 1 cut(s) 693
AvaII GGWCC 5 cut(s) 100, 1052, 1268, 2141, 2941
BalI TGGCCA 1 cut(s) 461
BamHI GGATCC 1 cut(s) 654
BanII GRGCYC 2 cut(s) 700, 1245
BarI GAAGNNNNNNTAC 2 cut(s) 769, 801
BbsI GAAGAC 5 cut(s) 84, 1641, 2218, 2565, 2709
Bbv12I GWGCWC 1 cut(s) 700
BbvI GCAGC 5 cut(s) 100, 430, 722, 809, 1111
BceAI ACGGC 2 cut(s) 699, 2820
BciT130I CCWGG 2 cut(s) 1605, 2799
BciVI GTATCC 1 cut(s) 1102
BclI TGATCA 1 cut(s) 706
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 3 cut(s) 1632, 1890, 2075
BfaI CTAG 4 cut(s) 866, 1460, 1617, 1757
BfmI CTRYAG 1 cut(s) 1853
BfoI RGCGCY 1 cut(s) 1740
BfuI GTATCC 1 cut(s) 1102
BglII AGATCT 2 cut(s) 1759, 2383
BisI GCNGC 6 cut(s) 114, 444, 736, 823, 1125, 2713
BlsI GCNGC 6 cut(s) 115, 445, 737, 824, 1126, 2714
Bme1390I CCNGG 3 cut(s) 1056, 1605, 2799
Bme18I GGWCC 5 cut(s) 100, 1052, 1268, 2141, 2941
BmeT110I CYCGRG 1 cut(s) 693
BmgBI CACGTC 2 cut(s) 640, 2873
BmgT120I GGNCC 5 cut(s) 100, 1052, 1268, 2141, 2941
BmiI GGNNCC 3 cut(s) 656, 1244, 2142
BmrFI CCNGG 3 cut(s) 1056, 1605, 2799
BmsI GCATC 4 cut(s) 1353, 2114, 2307, 2943
BoxI GACNNNNGTC 1 cut(s) 156
BpiI GAAGAC 5 cut(s) 84, 1641, 2218, 2565, 2709
BpmI CTGGAG 2 cut(s) 960, 2678
Bpu10I CCTNAGC 2 cut(s) 1322, 1379
BpuEI CTTGAG 4 cut(s) 182, 922, 1769, 2543
BpuMI CCSGG 1 cut(s) 1056
Bsa29I ATCGAT 2 cut(s) 1289, 1314
BsaBI GATNNNNATC 3 cut(s) 653, 1002, 1440
BsaI GGTCTC 1 cut(s) 1632
BsaJI CCNNGG 3 cut(s) 658, 2707, 2813
BsaWI WCCGGW 3 cut(s) 2143, 2349, 2900
BsaXI ACNNNNNCTCC 2 cut(s) 1946, 1976
Bsc4I CCNNNNNNNGG 4 cut(s) 1487, 1604, 2508, 2755
Bse118I RCCGGY 1 cut(s) 2176
Bse1I ACTGG 6 cut(s) 323, 1049, 1077, 2014, 2661, 2883
Bse3DI GCAATG 1 cut(s) 817
Bse8I GATNNNNATC 3 cut(s) 653, 1002, 1440
BseAI TCCGGA 1 cut(s) 2900
BseBI CCWGG 2 cut(s) 1605, 2799
BseCI ATCGAT 2 cut(s) 1289, 1314
BseDI CCNNGG 3 cut(s) 658, 2707, 2813
BseGI GGATG 5 cut(s) 592, 934, 1638, 2129, 2599
BseJI GATNNNNATC 3 cut(s) 653, 1002, 1440
BseLI CCNNNNNNNGG 4 cut(s) 1487, 1604, 2508, 2755
BseMI GCAATG 1 cut(s) 817
BseMII CTCAG 4 cut(s) 599, 1336, 1718, 1926
BseNI ACTGG 6 cut(s) 323, 1049, 1077, 2014, 2661, 2883
BseRI GAGGAG 4 cut(s) 21, 24, 87, 221
BseXI GCAGC 5 cut(s) 100, 430, 722, 809, 1111
BshFI GGCC 4 cut(s) 383, 461, 2028, 2712
BshVI ATCGAT 2 cut(s) 1289, 1314
BsiHKAI GWGCWC 1 cut(s) 700
BsiHKCI CYCGRG 1 cut(s) 693
BsiSI CCGG 5 cut(s) 1055, 2144, 2177, 2350, 2901
BslFI GGGAC 1 cut(s) 2154
BslI CCNNNNNNNGG 4 cut(s) 1487, 1604, 2508, 2755
BsmAI GTCTC 3 cut(s) 1632, 1890, 2075
BsmFI GGGAC 1 cut(s) 2154
BsmI GAATGC 1 cut(s) 669
BsnI GGCC 4 cut(s) 383, 461, 2028, 2712
Bso31I GGTCTC 1 cut(s) 1632
BsoBI CYCGRG 1 cut(s) 693
Bsp1286I GDGCHC 2 cut(s) 700, 1245
Bsp13I TCCGGA 1 cut(s) 2900
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 5 cut(s) 85, 667, 1190, 2158, 2713
BspANI GGCC 4 cut(s) 383, 461, 2028, 2712
BspCNI CTCAG 4 cut(s) 600, 1335, 1717, 1927
BspDI ATCGAT 2 cut(s) 1289, 1314
BspEI TCCGGA 1 cut(s) 2900
BspHI TCATGA 3 cut(s) 1039, 1630, 2949
BspLI GGNNCC 3 cut(s) 656, 1244, 2142
BspMAI CTGCAG 1 cut(s) 1857
BspPI GGATC 6 cut(s) 335, 649, 662, 1011, 1449, 2049
BspQI GCTCTTC 3 cut(s) 1155, 2328, 2620
BspTNI GGTCTC 1 cut(s) 1632
BsrDI GCAATG 1 cut(s) 817
BsrFI RCCGGY 1 cut(s) 2176
BsrI ACTGG 6 cut(s) 323, 1049, 1077, 2014, 2661, 2883
BssAI RCCGGY 1 cut(s) 2176
BssECI CCNNGG 3 cut(s) 658, 2707, 2813
BssT1I CCWWGG 1 cut(s) 658
Bst2UI CCWGG 2 cut(s) 1605, 2799
Bst4CI ACNGT 5 cut(s) 546, 731, 792, 809, 1844
Bst6I CTCTTC 6 cut(s) 22, 879, 1155, 1298, 2328, 2620
BstAPI GCANNNNNTGC 2 cut(s) 1555, 2186
BstC8I GCNNGC 7 cut(s) 381, 740, 1417, 1551, 1610, 1741, 2178
BstDEI CTNAG 8 cut(s) 62, 265, 608, 1322, 1379, 1704, 1935, 2045
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 2 cut(s) 1602, 2753
BstF5I GGATG 5 cut(s) 592, 934, 1638, 2129, 2599
BstH2I RGCGCY 1 cut(s) 1740
BstHHI GCGC 2 cut(s) 645, 1739
BstMAI GTCTC 3 cut(s) 1632, 1890, 2075
BstMWI GCNNNNNNNGC 3 cut(s) 1555, 2186, 2518
BstNI CCWGG 2 cut(s) 1605, 2799
BstNSI RCATGY 4 cut(s) 353, 493, 1412, 1553
BstPAI GACNNNNGTC 1 cut(s) 156
BstSCI CCNGG 3 cut(s) 1054, 1603, 2797
BstSFI CTRYAG 1 cut(s) 1853
BstV1I GCAGC 5 cut(s) 100, 430, 722, 809, 1111
BstV2I GAAGAC 5 cut(s) 84, 1641, 2218, 2565, 2709
BstX2I RGATCY 5 cut(s) 340, 654, 1759, 2041, 2383
BstXI CCANNNNNNTGG 1 cut(s) 2135
BstYI RGATCY 5 cut(s) 340, 654, 1759, 2041, 2383
Bsu15I ATCGAT 2 cut(s) 1289, 1314
BsuI GTATCC 1 cut(s) 1102
BsuRI GGCC 4 cut(s) 383, 461, 2028, 2712
BsuTUI ATCGAT 2 cut(s) 1289, 1314
BtgI CCRYGG 1 cut(s) 658
BtgZI GCGATG 1 cut(s) 330
BtrI CACGTC 2 cut(s) 640, 2873
BtsCI GGATG 5 cut(s) 592, 934, 1638, 2129, 2599
BtsIMutI CAGTG 3 cut(s) 330, 1084, 2460
Cac8I GCNNGC 7 cut(s) 381, 740, 1417, 1551, 1610, 1741, 2178
CaiI CAGNNNCTG 1 cut(s) 735
CciI TCATGA 3 cut(s) 1039, 1630, 2949
CfoI GCGC 2 cut(s) 645, 1739
Cfr10I RCCGGY 1 cut(s) 2176
Cfr13I GGNCC 5 cut(s) 100, 1052, 1268, 2141, 2941
ClaI ATCGAT 2 cut(s) 1289, 1314
CpoI CGGWCCG 1 cut(s) 1052
Csp6I GTAC 2 cut(s) 1614, 2017
CspI CGGWCCG 1 cut(s) 1052
CviQI GTAC 2 cut(s) 1614, 2017
DdeI CTNAG 8 cut(s) 62, 265, 608, 1322, 1379, 1704, 1935, 2045
DraI TTTAAA 1 cut(s) 1167
DraIII CACNNNGTG 1 cut(s) 1648
DrdI GACNNNNNNGTC 1 cut(s) 2871
DseDI GACNNNNNNGTC 1 cut(s) 2871
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 6 cut(s) 22, 879, 1155, 1298, 2328, 2620
EarI CTCTTC 6 cut(s) 22, 879, 1155, 1298, 2328, 2620
Ecl136II GAGCTC 1 cut(s) 698
Eco130I CCWWGG 1 cut(s) 658
Eco147I AGGCCT 1 cut(s) 383
Eco24I GRGCYC 2 cut(s) 700, 1245
Eco31I GGTCTC 1 cut(s) 1632
Eco47I GGWCC 5 cut(s) 100, 1052, 1268, 2141, 2941
Eco53kI GAGCTC 1 cut(s) 698
Eco57I CTGAAG 4 cut(s) 1215, 1343, 2212, 2759
Eco88I CYCGRG 1 cut(s) 693
EcoICRI GAGCTC 1 cut(s) 698
EcoNI CCTNNNNNAGG 2 cut(s) 1602, 2753
EcoRI GAATTC 1 cut(s) 1806
EcoRII CCWGG 2 cut(s) 1603, 2797
EcoT14I CCWWGG 1 cut(s) 658
EcoT22I ATGCAT 3 cut(s) 495, 1551, 2861
EcoT38I GRGCYC 2 cut(s) 700, 1245
ErhI CCWWGG 1 cut(s) 658
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 1 cut(s) 2154
FauI CCCGC 4 cut(s) 92, 660, 1197, 2151
FbaI TGATCA 1 cut(s) 706
FblI GTMKAC 1 cut(s) 1861
Fnu4HI GCNGC 6 cut(s) 114, 444, 736, 823, 1125, 2713
FokI GGATG 5 cut(s) 599, 941, 1625, 2136, 2606
FriOI GRGCYC 2 cut(s) 700, 1245
Fsp4HI GCNGC 6 cut(s) 114, 444, 736, 823, 1125, 2713
FspAI RTGCGCAY 1 cut(s) 644
FspBI CTAG 4 cut(s) 866, 1460, 1617, 1757
FspI TGCGCA 1 cut(s) 644
GlaI GCGC 2 cut(s) 644, 1738
GluI GCNGC 6 cut(s) 114, 444, 736, 823, 1125, 2713
GsuI CTGGAG 2 cut(s) 960, 2678
HaeII RGCGCY 1 cut(s) 1740
HaeIII GGCC 4 cut(s) 383, 461, 2028, 2712
HapII CCGG 5 cut(s) 1055, 2144, 2177, 2350, 2901
HhaI GCGC 2 cut(s) 645, 1739
Hin6I GCGC 2 cut(s) 643, 1737
HinP1I GCGC 2 cut(s) 643, 1737
HincII GTYRAC 5 cut(s) 9, 1134, 2428, 2533, 2920
HindII GTYRAC 5 cut(s) 9, 1134, 2428, 2533, 2920
HindIII AAGCTT 4 cut(s) 1817, 2132, 2489, 2519
HpaI GTTAAC 3 cut(s) 1134, 2533, 2920
HpaII CCGG 5 cut(s) 1055, 2144, 2177, 2350, 2901
HphI GGTGA 2 cut(s) 130, 228
Hpy166II GTNNAC 9 cut(s) 9, 100, 565, 626, 1134, 1862, 2428, 2533, 2920
Hpy8I GTNNAC 9 cut(s) 9, 100, 565, 626, 1134, 1862, 2428, 2533, 2920
Hpy99I CGWCG 1 cut(s) 42
HpyAV CCTTC 6 cut(s) 753, 795, 1426, 1760, 2316, 2759
HpyCH4III ACNGT 5 cut(s) 546, 731, 792, 809, 1844
HpyCH4IV ACGT 4 cut(s) 639, 837, 2529, 2872
HpyF10VI GCNNNNNNNGC 3 cut(s) 1555, 2186, 2518
HpyF3I CTNAG 8 cut(s) 62, 265, 608, 1322, 1379, 1704, 1935, 2045
HpySE526I ACGT 4 cut(s) 639, 837, 2529, 2872
HspAI GCGC 2 cut(s) 643, 1737
Kpn2I TCCGGA 1 cut(s) 2900
KroI GCCGGC 1 cut(s) 2176
KroNI GCCGGC 1 cut(s) 2178
Ksp22I TGATCA 1 cut(s) 706
KspAI GTTAAC 3 cut(s) 1134, 2533, 2920
LguI GCTCTTC 3 cut(s) 1155, 2328, 2620
LmnI GCTCC 3 cut(s) 941, 1207, 1248
Lsp1109I GCAGC 5 cut(s) 100, 430, 722, 809, 1111
LweI GCATC 4 cut(s) 1353, 2114, 2307, 2943
MaeI CTAG 4 cut(s) 866, 1460, 1617, 1757
MaeII ACGT 4 cut(s) 639, 837, 2529, 2872
MaeIII GTNAC 4 cut(s) 136, 803, 2203, 2396
MfeI CAATTG 2 cut(s) 201, 687
MflI RGATCY 5 cut(s) 340, 654, 1759, 2041, 2383
MhlI GDGCHC 2 cut(s) 700, 1245
MlsI TGGCCA 1 cut(s) 461
MluNI TGGCCA 1 cut(s) 461
MlyI GAGTC 7 cut(s) 218, 906, 1601, 1858, 1867, 1892, 2000
MmeI TCCRAC 6 cut(s) 858, 1554, 1783, 2145, 2522, 2571
Mox20I TGGCCA 1 cut(s) 461
Mph1103I ATGCAT 3 cut(s) 495, 1551, 2861
MroI TCCGGA 1 cut(s) 2900
MroNI GCCGGC 1 cut(s) 2176
MroXI GAANNNNTTC 5 cut(s) 402, 885, 1149, 2277, 2781
MscI TGGCCA 1 cut(s) 461
MslI CAYNNNNRTG 5 cut(s) 108, 323, 633, 1276, 2268
Msp20I TGGCCA 1 cut(s) 461
MspI CCGG 5 cut(s) 1055, 2144, 2177, 2350, 2901
MspR9I CCNGG 3 cut(s) 1056, 1605, 2799
MunI CAATTG 2 cut(s) 201, 687
Mva1269I GAATGC 1 cut(s) 669
MvaI CCWGG 2 cut(s) 1605, 2799
MwoI GCNNNNNNNGC 3 cut(s) 1555, 2186, 2518
NaeI GCCGGC 1 cut(s) 2178
NciI CCSGG 1 cut(s) 1056
NcoI CCATGG 1 cut(s) 658
NgoMIV GCCGGC 1 cut(s) 2176
NlaIV GGNNCC 3 cut(s) 656, 1244, 2142
NmuCI GTSAC 3 cut(s) 136, 803, 2396
NsbI TGCGCA 1 cut(s) 644
NsiI ATGCAT 3 cut(s) 495, 1551, 2861
NspI RCATGY 4 cut(s) 353, 493, 1412, 1553
PaeI GCATGC 1 cut(s) 1553
PagI TCATGA 3 cut(s) 1039, 1630, 2949
PceI AGGCCT 1 cut(s) 383
PciI ACATGT 1 cut(s) 1408
PciSI GCTCTTC 3 cut(s) 1155, 2328, 2620
PcsI WCGNNNNNNNCGW 1 cut(s) 2869
PctI GAATGC 1 cut(s) 669
PdiI GCCGGC 1 cut(s) 2178
PdmI GAANNNNTTC 5 cut(s) 402, 885, 1149, 2277, 2781
PfeI GAWTC 7 cut(s) 1831, 1930, 2059, 2252, 2285, 2663, 2843
PflFI GACNNNGTC 1 cut(s) 2945
PflMI CCANNNNNTGG 1 cut(s) 2508
PfoI TCCNGGA 2 cut(s) 1054, 2797
PkrI GCNGC 6 cut(s) 115, 445, 737, 824, 1126, 2714
PleI GAGTC 7 cut(s) 217, 905, 1600, 1857, 1866, 1891, 2000
PpsI GAGTC 7 cut(s) 217, 905, 1600, 1857, 1866, 1891, 2000
PscI ACATGT 1 cut(s) 1408
PshAI GACNNNNGTC 1 cut(s) 156
PshBI ATTAAT 2 cut(s) 2085, 2112
Psp124BI GAGCTC 1 cut(s) 700
Psp1406I AACGTT 2 cut(s) 837, 2529
Psp6I CCWGG 2 cut(s) 1603, 2797
PspGI CCWGG 2 cut(s) 1603, 2797
PspN4I GGNNCC 3 cut(s) 656, 1244, 2142
PspPI GGNCC 5 cut(s) 100, 1052, 1268, 2141, 2941
PstI CTGCAG 1 cut(s) 1857
PstNI CAGNNNCTG 1 cut(s) 735
PsuI RGATCY 5 cut(s) 340, 654, 1759, 2041, 2383
PsyI GACNNNGTC 1 cut(s) 2945
RsaI GTAC 2 cut(s) 1615, 2018
RsaNI GTAC 2 cut(s) 1614, 2017
RseI CAYNNNNRTG 5 cut(s) 108, 323, 633, 1276, 2268
Rsr2I CGGWCCG 1 cut(s) 1052
RsrII CGGWCCG 1 cut(s) 1052
SacI GAGCTC 1 cut(s) 700
SapI GCTCTTC 3 cut(s) 1155, 2328, 2620
SatI GCNGC 6 cut(s) 114, 444, 736, 823, 1125, 2713
Sau96I GGNCC 5 cut(s) 100, 1052, 1268, 2141, 2941
SchI GAGTC 7 cut(s) 218, 906, 1601, 1858, 1867, 1892, 2000
ScrFI CCNGG 3 cut(s) 1056, 1605, 2799
SduI GDGCHC 2 cut(s) 700, 1245
SfaNI GCATC 4 cut(s) 1353, 2114, 2307, 2943
SfcI CTRYAG 1 cut(s) 1853
SinI GGWCC 5 cut(s) 100, 1052, 1268, 2141, 2941
SmiMI CAYNNNNRTG 5 cut(s) 108, 323, 633, 1276, 2268
SmlI CTYRAG 4 cut(s) 161, 901, 1748, 2522
SmoI CTYRAG 4 cut(s) 161, 901, 1748, 2522
SphI GCATGC 1 cut(s) 1553
SseBI AGGCCT 1 cut(s) 383
SsiI CCGC 5 cut(s) 85, 667, 1190, 2158, 2713
SspI AATATT 2 cut(s) 1222, 2110
SspMI CTAG 4 cut(s) 866, 1460, 1617, 1757
SstI GAGCTC 1 cut(s) 700
StuI AGGCCT 1 cut(s) 383
StyD4I CCNGG 3 cut(s) 1054, 1603, 2797
StyI CCWWGG 1 cut(s) 658
TaaI ACNGT 5 cut(s) 546, 731, 792, 809, 1844
TaiI ACGT 4 cut(s) 642, 840, 2532, 2875
TaqI TCGA 4 cut(s) 40, 1289, 1314, 2295
TaqII GACCGA 3 cut(s) 1040, 2212, 2721
TauI GCSGC 1 cut(s) 2715
TfiI GAWTC 7 cut(s) 1831, 1930, 2059, 2252, 2285, 2663, 2843
TscAI CASTG 3 cut(s) 330, 1084, 2460
TseFI GTSAC 3 cut(s) 136, 803, 2396
TseI GCWGC 5 cut(s) 113, 443, 735, 822, 1124
Tsp45I GTSAC 3 cut(s) 136, 803, 2396
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 3 cut(s) 330, 1084, 2460
Tth111I GACNNNGTC 1 cut(s) 2945
Van91I CCANNNNNTGG 1 cut(s) 2508
VpaK11BI GGWCC 5 cut(s) 100, 1052, 1268, 2141, 2941
VspI ATTAAT 2 cut(s) 2085, 2112
XagI CCTNNNNNAGG 2 cut(s) 1602, 2753
XapI RAATTY 7 cut(s) 91, 215, 1398, 1806, 2464, 2625, 2808
XbaI TCTAGA 1 cut(s) 1756
XceI RCATGY 4 cut(s) 353, 493, 1412, 1553
XcmI CCANNNNNNNNNTGG 3 cut(s) 1799, 2021, 2505
XmiI GTMKAC 1 cut(s) 1861
XmnI GAANNNNTTC 5 cut(s) 402, 885, 1149, 2277, 2781
XspI CTAG 4 cut(s) 866, 1460, 1617, 1757
Zsp2I ATGCAT 3 cut(s) 495, 1551, 2861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.