Rmu_sc0002634.1_g000024

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002634.1
OG0000105
Physical Location & Seq
Reverse (-)
116648 .. 120815
4168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002634.1_g000024.1.cds

Sequence Viewer

Length: 3513 bp
atggcgtcagcctcctctcgtcgtcaatggaaatatgatgtgtttctaagtttcaggggaagagatacccgcagtgtttttatcgatcatctgtattctgcactaactcggataggaattctcgcctttcgggatgacccagagcttgagaaaggaaaatccattaggcctgaactttttgctgcaattgaggactccagatgtgcggttgtcattctctcacaggactatacttcttcgtcatggtgcttggatgaactcgtcaagattatgcaatgcatgaaagagatgggccaacaggtcctccccgtcttcttctgggtggatccttcagatgtgcggcaccaaaggggaagttttgagctcaaatgggaacccaaagtagaagtaagggaacatgaagaagtttatgggcagaatgaggacagattatatgcatggagagctgctttgactgaggtggccaatctttctggctggcatttcgagcctcatcaatatcttacagaactaattgacgaaattgttaatcatatactaaagaagtccgtgtatacatcttcaagtgttgacaagggcttcataggaatggattcccgcgttgatgatttaataggcaattacatatgtccacagctttgtggggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctctagctatccatgatgaaatatatcaggattttgaccgaacctgctttctttccaatgttagagaaatgtctaaaaccaatggcctagtttctctacaagaaaaacttctttccagaatcctaatggcaaaaattaaaaatatagagcatgaagacacaggagctgctatgataaaaaggcggttgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtccagggagtagaatcatcataaccaccacagatattcagttgttaaaggcacatgatgttgatgctacatacaaggctaaagggttaaaccgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatgtcccccaccagaagattatttgcatctgtgctaccatattttaaggtatgctcaggggcttccgttggcggttgtggttttaggttcttttctatttggtagaagcattgatgaatgggcaagtgcaatagataggctaaacaaaacaccacataaacgcattattgaggtgcttcggattagttttgatggactggatgaaaaagacagagaaatattcctgcatattgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactagactattgccagctaaacccggtcattggtttaagtgttcttgctgatcgatgtctcataactatctccaacaacgaactgtcgatgcatgatttgctacaagaaatgggccgggaaattgttcgtgaacagtctcctaaacagccaggcaaacgtagtagattatggtctcatgaagacatcaacaaggtgctggagagaaataagggaacagattcaatccaaggcatggtaatggagatgacaaaattacaaggggctcactggaatccagaagccttttcaaatatgtctcaacttagtcttctccatattcataatgtggaccttcccaaaggcctcacttgtctttccaattccttgagacttatcgaatggactgggtatcccttaagatccctcccacaaaattttgaagcagatgaacttattgaacttaacttgtgccacagtaacattgaacagctttggaagggaacaaagaattttgacatgttgaagttcatcaaactctgccattctcaaaacattgtggagaccccagacctcacaggcgttcagaatcttgagagtttagatcttgaaggatgtgagaatttggtaagagtccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaagtctcgagagtctgccaagtagaattgaaatggaatctcttgaaactttaattctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgttggtgctttgtcttgatgagactgccattgaggaactgcctgtttcaattgaacggctgactggccttgtctcattgaatctaaccaactgcagaaatcttgtttgtcttccaagcaacatcaataagttgaagtctgttgaaaatcttaatctttctggatgcttgaaacttggcaaacatgaggtaaatgtgaatggtgggtctgcaatagaaatgccatctactcttgatctcataaaatatgtgagaggttcaatttctcatggatgcgaaatagtttggggatctttaaataagttcttgccttctggattggtgccaagagtgaatacagagccaatgagtttctgcttgcctatatctggcctgtgtagtttaacatatctgaacctgagtaattgcaatcttggtgaaggagcatttgccaacgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgtcttccttcaggcattggattgctttctaagcttgagaacttgaacttggagaattgcaagacacttcaagagttgtcagaccttccatcaaataacatactcgatttaagggcagatggttgtacttcgctgaaatacttttttgaggcatcaaatttgaacagattaaacaaatcatatttcaatttcatcaattgcttcaatttaaatggcaatgaaggatgcaataacatagccttagaaatgctgaagacattcttgtatcagggaatctctaataacagggaaacttttcaaattgtaattcctggaagtaatattccaaagtggttcagccattggagtgttgagtgttcattaaatttttttctacctgaacattggaataacagtcggtttttgggatttgccttgtgtgctgtttttgtactccatgagcaccatcgggtggatgagctttatatagatgcattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagctcgacggaagagaattggaagtctatggcagacagcctgcatttcgttttagtgaagaattttgccaggttgagtcagaccacctgtggctattctatgtatctcgtgataaatactttggtacagagtggtggcatagcagttgcagtgaggttgaattcttatttgaaaccagagggccaggtctggaggtgaaggagtgtggagttcgttttatatacgagcaagatgtgcaagggttaaaccaaacaacctctcaatcaagcagtgggatatctcaagaggatatagggatgtctcaagaggtttttattccgcttgaagaattgtatgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1170

Amino Acids

133.29

Weight (kDa)

5.76

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 749
AccB1I GGYRCC 2 cut(s) 342, 2485
AccB7I CCANNNNNTGG 2 cut(s) 1615, 3106
AccI GTMKAC 1 cut(s) 554
AccII CGCG 1 cut(s) 600
AciI CCGC 8 cut(s) 70, 206, 340, 598, 673, 880, 1178, 3491
AclI AACGTT 1 cut(s) 2161
AclWI GGATC 8 cut(s) 320, 333, 655, 668, 930, 1374, 1776, 2461
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 9 cut(s) 117, 1795, 1870, 1981, 2600, 2812, 3019, 3233, 3332
AcuI CTGAAG 4 cut(s) 315, 2649, 2927, 3191
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 3 cut(s) 2782, 3087, 3298
AfiI CCNNNNNNNGG 4 cut(s) 1412, 1615, 2531, 3106
AflII CTTAAG 1 cut(s) 1777
AflIII ACRYGT 1 cut(s) 1878
AjnI CCWGG 5 cut(s) 973, 1531, 2965, 3240, 3355
AjuI GAANNNNNNNTTGG 2 cut(s) 2687, 2719
Alw21I GWGCWC 2 cut(s) 366, 3099
AlwI GGATC 8 cut(s) 320, 333, 655, 668, 930, 1374, 1776, 2461
AlwNI CAGNNNCTG 1 cut(s) 863
Ama87I CYCGRG 2 cut(s) 2057, 2138
AoxI GGCC 9 cut(s) 167, 292, 462, 781, 1495, 1723, 2230, 2533, 3353
ApeKI GCWGC 3 cut(s) 182, 446, 863
ApoI RAATTY 9 cut(s) 117, 1795, 1870, 1981, 2600, 2812, 3019, 3233, 3332
Asp700I GAANNNNTTC 7 cut(s) 592, 804, 1074, 1506, 1600, 2912, 2949
AspS9I GGNCC 6 cut(s) 292, 301, 971, 1495, 1711, 3353
AsuC2I CCSGG 2 cut(s) 1406, 1499
AsuHPI GGTGA 3 cut(s) 2591, 2635, 3379
AvaI CYCGRG 2 cut(s) 2057, 2138
AvaII GGWCC 3 cut(s) 301, 971, 1711
BalI TGGCCA 1 cut(s) 464
BamHI GGATCC 2 cut(s) 325, 660
BanI GGYRCC 2 cut(s) 342, 2485
BanII GRGCYC 2 cut(s) 366, 1648
BauI CACGAG 1 cut(s) 3279
BbsI GAAGAC 7 cut(s) 304, 858, 1569, 1682, 2267, 2651, 2915
Bbv12I GWGCWC 2 cut(s) 366, 3099
BbvI GCAGC 3 cut(s) 169, 433, 850
BccI CCATC 7 cut(s) 283, 1292, 2004, 2395, 2752, 2768, 3108
BceAI ACGGC 1 cut(s) 2237
BcgI CGANNNNNNTGC 2 cut(s) 2038, 2072
BciT130I CCWGG 5 cut(s) 975, 1533, 2967, 3242, 3357
BciVI GTATCC 1 cut(s) 1782
BcnI CCSGG 2 cut(s) 1406, 1499
BfaI CTAG 4 cut(s) 701, 785, 1385, 3511
BfmI CTRYAG 1 cut(s) 2257
BfrI CTTAAG 1 cut(s) 1777
BfuAI ACCTGC 1 cut(s) 749
BfuI GTATCC 1 cut(s) 1782
BglII AGATCT 1 cut(s) 1963
BisI GCNGC 4 cut(s) 183, 341, 447, 864
BlsI GCNGC 4 cut(s) 184, 342, 448, 865
Bme1390I CCNGG 7 cut(s) 975, 1406, 1499, 1533, 2967, 3242, 3357
Bme18I GGWCC 3 cut(s) 301, 971, 1711
BmeT110I CYCGRG 2 cut(s) 2057, 2138
BmgT120I GGNCC 6 cut(s) 292, 301, 971, 1495, 1711, 3353
BmiI GGNNCC 5 cut(s) 327, 344, 375, 662, 2487
BmrFI CCNGG 7 cut(s) 975, 1406, 1499, 1533, 2967, 3242, 3357
BmrI ACTGGG 1 cut(s) 1776
BmsI GCATC 8 cut(s) 1024, 1141, 1461, 2318, 2426, 2816, 2870, 3115
BmuI ACTGGG 1 cut(s) 1776
BpiI GAAGAC 7 cut(s) 304, 858, 1569, 1682, 2267, 2651, 2915
BpmI CTGGAG 3 cut(s) 181, 1601, 3383
Bpu10I CCTNAGC 1 cut(s) 1161
BpuEI CTTGAG 6 cut(s) 167, 1768, 1973, 2711, 3438, 3459
BpuMI CCSGG 2 cut(s) 1406, 1499
Bsa29I ATCGAT 2 cut(s) 84, 1435
BsaBI GATNNNNATC 2 cut(s) 921, 1365
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1560, 1916
BsaJI CCNNGG 4 cut(s) 664, 974, 1609, 2005
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 4 cut(s) 1412, 1615, 2531, 3106
Bse1I ACTGG 5 cut(s) 968, 1308, 1655, 1771, 2233
Bse3DI GCAATG 2 cut(s) 281, 2878
Bse8I GATNNNNATC 2 cut(s) 921, 1365
BseBI CCWGG 5 cut(s) 975, 1533, 2967, 3242, 3357
BseCI ATCGAT 2 cut(s) 84, 1435
BseDI CCNNGG 4 cut(s) 664, 974, 1609, 2005
BseGI GGATG 9 cut(s) 139, 259, 1312, 1979, 2333, 2441, 2885, 3115, 3474
BseJI GATNNNNATC 2 cut(s) 921, 1365
BseLI CCNNNNNNNGG 4 cut(s) 1412, 1615, 2531, 3106
BseMI GCAATG 2 cut(s) 281, 2878
BseMII CTCAG 3 cut(s) 447, 1175, 2552
BseNI ACTGG 5 cut(s) 968, 1308, 1655, 1771, 2233
BseRI GAGGAG 1 cut(s) 4
BseXI GCAGC 3 cut(s) 169, 433, 850
BsgI GTGCAG 1 cut(s) 84
Bsh1236I CGCG 1 cut(s) 600
BshFI GGCC 9 cut(s) 169, 294, 464, 783, 1497, 1725, 2232, 2535, 3355
BshNI GGYRCC 2 cut(s) 342, 2485
BshVI ATCGAT 2 cut(s) 84, 1435
BsiHKAI GWGCWC 2 cut(s) 366, 3099
BsiHKCI CYCGRG 2 cut(s) 2057, 2138
BsiSI CCGG 2 cut(s) 1406, 1498
BslFI GGGAC 1 cut(s) 1095
BslI CCNNNNNNNGG 4 cut(s) 1412, 1615, 2531, 3106
BsmFI GGGAC 1 cut(s) 1095
BsmI GAATGC 1 cut(s) 3128
BsnI GGCC 9 cut(s) 169, 294, 464, 783, 1497, 1725, 2232, 2535, 3355
Bso31I GGTCTC 2 cut(s) 1560, 1916
BsoBI CYCGRG 2 cut(s) 2057, 2138
Bsp1286I GDGCHC 3 cut(s) 366, 1648, 3099
Bsp19I CCATGG 1 cut(s) 664
BspACI CCGC 8 cut(s) 70, 206, 340, 598, 673, 880, 1178, 3491
BspANI GGCC 9 cut(s) 169, 294, 464, 783, 1497, 1725, 2232, 2535, 3355
BspCNI CTCAG 3 cut(s) 448, 1174, 2553
BspDI ATCGAT 2 cut(s) 84, 1435
BspFNI CGCG 1 cut(s) 600
BspHI TCATGA 1 cut(s) 1558
BspLI GGNNCC 5 cut(s) 327, 344, 375, 662, 2487
BspMAI CTGCAG 1 cut(s) 2261
BspMI ACCTGC 1 cut(s) 749
BspPI GGATC 8 cut(s) 320, 333, 655, 668, 930, 1374, 1776, 2461
BspT107I GGYRCC 2 cut(s) 342, 2485
BspTI CTTAAG 1 cut(s) 1777
BspTNI GGTCTC 2 cut(s) 1560, 1916
BsrDI GCAATG 2 cut(s) 281, 2878
BsrI ACTGG 5 cut(s) 968, 1308, 1655, 1771, 2233
BssECI CCNNGG 4 cut(s) 664, 974, 1609, 2005
BssNAI GTATAC 1 cut(s) 555
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 3279
BssT1I CCWWGG 3 cut(s) 664, 1609, 2005
Bst1107I GTATAC 1 cut(s) 555
Bst2BI CACGAG 1 cut(s) 3279
Bst2UI CCWGG 5 cut(s) 975, 1533, 2967, 3242, 3357
Bst4CI ACNGT 5 cut(s) 1064, 1467, 1518, 1838, 3050
Bst6I CTCTTC 2 cut(s) 55, 3178
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1777
BstAPI GCANNNNNTGC 2 cut(s) 1480, 3406
BstC8I GCNNGC 6 cut(s) 479, 671, 1342, 1397, 2522, 3213
BstDEI CTNAG 8 cut(s) 47, 456, 1161, 1685, 2561, 2636, 2685, 2896
BstDSI CCRYGG 1 cut(s) 664
BstEII GGTNACC 1 cut(s) 2623
BstF5I GGATG 9 cut(s) 139, 259, 1312, 1979, 2333, 2441, 2885, 3115, 3474
BstFNI CGCG 1 cut(s) 600
BstMWI GCNNNNNNNGC 7 cut(s) 443, 487, 675, 1480, 2686, 3074, 3406
BstNI CCWGG 5 cut(s) 975, 1533, 2967, 3242, 3357
BstNSI RCATGY 2 cut(s) 673, 1882
BstPI GGTNACC 1 cut(s) 2623
BstSCI CCNGG 7 cut(s) 973, 1404, 1497, 1531, 2965, 3240, 3355
BstSFI CTRYAG 1 cut(s) 2257
BstUI CGCG 1 cut(s) 600
BstV1I GCAGC 3 cut(s) 169, 433, 850
BstV2I GAAGAC 7 cut(s) 304, 858, 1569, 1682, 2267, 2651, 2915
BstX2I RGATCY 5 cut(s) 325, 660, 1781, 1963, 2453
BstYI RGATCY 5 cut(s) 325, 660, 1781, 1963, 2453
BstZ17I GTATAC 1 cut(s) 555
Bsu15I ATCGAT 2 cut(s) 84, 1435
BsuI GTATCC 1 cut(s) 1782
BsuRI GGCC 9 cut(s) 169, 294, 464, 783, 1497, 1725, 2232, 2535, 3355
BsuTUI ATCGAT 2 cut(s) 84, 1435
BtgI CCRYGG 1 cut(s) 664
BtsCI GGATG 9 cut(s) 139, 259, 1312, 1979, 2333, 2441, 2885, 3115, 3474
BtsI GCAGTG 3 cut(s) 79, 3328, 3448
BtsIMutI CAGTG 4 cut(s) 79, 1648, 3328, 3448
BveI ACCTGC 1 cut(s) 749
Cac8I GCNNGC 6 cut(s) 479, 671, 1342, 1397, 2522, 3213
CaiI CAGNNNCTG 1 cut(s) 863
CciI TCATGA 1 cut(s) 1558
Cfr13I GGNCC 6 cut(s) 292, 301, 971, 1495, 1711, 3353
ClaI ATCGAT 2 cut(s) 84, 1435
Csp6I GTAC 3 cut(s) 2781, 3086, 3297
CviQI GTAC 3 cut(s) 2781, 3086, 3297
DdeI CTNAG 8 cut(s) 47, 456, 1161, 1685, 2561, 2636, 2685, 2896
DraI TTTAAA 2 cut(s) 2460, 2865
EaeI YGGCCR 1 cut(s) 462
Eam1104I CTCTTC 2 cut(s) 55, 3178
EarI CTCTTC 2 cut(s) 55, 3178
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 3 cut(s) 664, 1609, 2005
Eco147I AGGCCT 2 cut(s) 169, 1725
Eco24I GRGCYC 2 cut(s) 366, 1648
Eco31I GGTCTC 2 cut(s) 1560, 1916
Eco32I GATATC 1 cut(s) 3450
Eco47I GGWCC 3 cut(s) 301, 971, 1711
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 4 cut(s) 315, 2649, 2927, 3191
Eco88I CYCGRG 2 cut(s) 2057, 2138
Eco91I GGTNACC 1 cut(s) 2623
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 1 cut(s) 301
EcoO65I GGTNACC 1 cut(s) 2623
EcoRI GAATTC 2 cut(s) 117, 3332
EcoRII CCWGG 5 cut(s) 973, 1531, 2965, 3240, 3355
EcoRV GATATC 1 cut(s) 3450
EcoT14I CCWWGG 3 cut(s) 664, 1609, 2005
EcoT22I ATGCAT 4 cut(s) 281, 439, 1476, 3130
EcoT38I GRGCYC 2 cut(s) 366, 1648
ErhI CCWWGG 3 cut(s) 664, 1609, 2005
FalI AAGNNNNNCTT 4 cut(s) 789, 821, 2900, 2932
FaqI GGGAC 1 cut(s) 1095
FauI CCCGC 3 cut(s) 77, 605, 666
FauNDI CATATG 1 cut(s) 626
FblI GTMKAC 1 cut(s) 554
Fnu4HI GCNGC 4 cut(s) 183, 341, 447, 864
FokI GGATG 9 cut(s) 146, 266, 1319, 1986, 2340, 2448, 2892, 3122, 3481
FriOI GRGCYC 2 cut(s) 366, 1648
Fsp4HI GCNGC 4 cut(s) 183, 341, 447, 864
FspBI CTAG 4 cut(s) 701, 785, 1385, 3511
GluI GCNGC 4 cut(s) 183, 341, 447, 864
GsuI CTGGAG 3 cut(s) 181, 1601, 3383
HaeIII GGCC 9 cut(s) 169, 294, 464, 783, 1497, 1725, 2232, 2535, 3355
HapII CCGG 2 cut(s) 1406, 1498
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 2 cut(s) 571, 930
HindII GTYRAC 2 cut(s) 571, 930
HindIII AAGCTT 2 cut(s) 2021, 2687
HpaII CCGG 2 cut(s) 1406, 1498
HphI GGTGA 3 cut(s) 2591, 2635, 3379
Hpy166II GTNNAC 6 cut(s) 555, 571, 632, 930, 1514, 1711
Hpy188I TCNGA 7 cut(s) 111, 334, 1287, 1947, 2556, 2737, 3253
Hpy8I GTNNAC 6 cut(s) 555, 571, 632, 930, 1514, 1711
Hpy99I CGWCG 2 cut(s) 24, 3182
HpyCH4III ACNGT 5 cut(s) 1064, 1467, 1518, 1838, 3050
HpyCH4IV ACGT 2 cut(s) 1540, 2161
HpyF10VI GCNNNNNNNGC 7 cut(s) 443, 487, 675, 1480, 2686, 3074, 3406
HpyF3I CTNAG 8 cut(s) 47, 456, 1161, 1685, 2561, 2636, 2685, 2896
HpySE526I ACGT 2 cut(s) 1540, 2161
Hsp92I GRCGYC 1 cut(s) 5
LmnI GCTCC 2 cut(s) 860, 2585
Lsp1109I GCAGC 3 cut(s) 169, 433, 850
LweI GCATC 8 cut(s) 1024, 1141, 1461, 2318, 2426, 2816, 2870, 3115
MaeI CTAG 4 cut(s) 701, 785, 1385, 3511
MaeII ACGT 2 cut(s) 1540, 2161
MaeIII GTNAC 4 cut(s) 1372, 1838, 2606, 2623
MfeI CAATTG 3 cut(s) 186, 2214, 2851
MflI RGATCY 5 cut(s) 325, 660, 1781, 1963, 2453
MhlI GDGCHC 3 cut(s) 366, 1648, 3099
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 4 cut(s) 188, 2001, 2071, 3257
MmeI TCCRAC 2 cut(s) 1479, 2128
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 4 cut(s) 281, 439, 1476, 3130
MroXI GAANNNNTTC 7 cut(s) 592, 804, 1074, 1506, 1600, 2912, 2949
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 3 cut(s) 587, 1619, 3000
Msp20I TGGCCA 1 cut(s) 464
MspCI CTTAAG 1 cut(s) 1777
MspI CCGG 2 cut(s) 1406, 1498
MspR9I CCNGG 7 cut(s) 975, 1406, 1499, 1533, 2967, 3242, 3357
MunI CAATTG 3 cut(s) 186, 2214, 2851
Mva1269I GAATGC 1 cut(s) 3128
MvaI CCWGG 5 cut(s) 975, 1533, 2967, 3242, 3357
MvnI CGCG 1 cut(s) 600
MwoI GCNNNNNNNGC 7 cut(s) 443, 487, 675, 1480, 2686, 3074, 3406
NciI CCSGG 2 cut(s) 1406, 1499
NcoI CCATGG 1 cut(s) 664
NdeI CATATG 1 cut(s) 626
NlaIV GGNNCC 5 cut(s) 327, 344, 375, 662, 2487
NmuCI GTSAC 2 cut(s) 1372, 2623
NsiI ATGCAT 4 cut(s) 281, 439, 1476, 3130
NspI RCATGY 2 cut(s) 673, 1882
PaeI GCATGC 1 cut(s) 673
PaeR7I CTCGAG 1 cut(s) 2057
PagI TCATGA 1 cut(s) 1558
PceI AGGCCT 2 cut(s) 169, 1725
PciI ACATGT 1 cut(s) 1878
PctI GAATGC 1 cut(s) 3128
PdmI GAANNNNTTC 7 cut(s) 592, 804, 1074, 1506, 1600, 2912, 2949
PflMI CCANNNNNTGG 2 cut(s) 1615, 3106
PfoI TCCNGGA 1 cut(s) 2965
PkrI GCNGC 4 cut(s) 184, 342, 448, 865
PleI GAGTC 4 cut(s) 188, 2000, 2070, 3256
PpsI GAGTC 4 cut(s) 188, 2000, 2070, 3256
PpuMI RGGWCCY 1 cut(s) 301
PscI ACATGT 1 cut(s) 1878
Psp124BI GAGCTC 1 cut(s) 366
Psp1406I AACGTT 1 cut(s) 2161
Psp5II RGGWCCY 1 cut(s) 301
Psp6I CCWGG 5 cut(s) 973, 1531, 2965, 3240, 3355
PspEI GGTNACC 1 cut(s) 2623
PspGI CCWGG 5 cut(s) 973, 1531, 2965, 3240, 3355
PspN4I GGNNCC 5 cut(s) 327, 344, 375, 662, 2487
PspPI GGNCC 6 cut(s) 292, 301, 971, 1495, 1711, 3353
PspPPI RGGWCCY 1 cut(s) 301
PstI CTGCAG 1 cut(s) 2261
PstNI CAGNNNCTG 1 cut(s) 863
PsuI RGATCY 5 cut(s) 325, 660, 1781, 1963, 2453
RsaI GTAC 3 cut(s) 2782, 3087, 3298
RsaNI GTAC 3 cut(s) 2781, 3086, 3297
RseI CAYNNNNRTG 3 cut(s) 587, 1619, 3000
SacI GAGCTC 1 cut(s) 366
SatI GCNGC 4 cut(s) 183, 341, 447, 864
Sau96I GGNCC 6 cut(s) 292, 301, 971, 1495, 1711, 3353
SchI GAGTC 4 cut(s) 188, 2001, 2071, 3257
ScrFI CCNGG 7 cut(s) 975, 1406, 1499, 1533, 2967, 3242, 3357
SduI GDGCHC 3 cut(s) 366, 1648, 3099
SfaNI GCATC 8 cut(s) 1024, 1141, 1461, 2318, 2426, 2816, 2870, 3115
SfcI CTRYAG 1 cut(s) 2257
Sfr274I CTCGAG 1 cut(s) 2057
SinI GGWCC 3 cut(s) 301, 971, 1711
SlaI CTCGAG 1 cut(s) 2057
SmiI ATTTAAAT 1 cut(s) 2865
SmiMI CAYNNNNRTG 3 cut(s) 587, 1619, 3000
SmlI CTYRAG 8 cut(s) 146, 1747, 1777, 1952, 2057, 2690, 3453, 3474
SmoI CTYRAG 8 cut(s) 146, 1747, 1777, 1952, 2057, 2690, 3453, 3474
SphI GCATGC 1 cut(s) 673
SseBI AGGCCT 2 cut(s) 169, 1725
SsiI CCGC 8 cut(s) 70, 206, 340, 598, 673, 880, 1178, 3491
SspI AATATT 2 cut(s) 1326, 2977
SspMI CTAG 4 cut(s) 701, 785, 1385, 3511
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 2 cut(s) 169, 1725
StyD4I CCNGG 7 cut(s) 973, 1404, 1497, 1531, 2965, 3240, 3355
StyI CCWWGG 3 cut(s) 664, 1609, 2005
SwaI ATTTAAAT 1 cut(s) 2865
TaaI ACNGT 5 cut(s) 1064, 1467, 1518, 1838, 3050
TaiI ACGT 2 cut(s) 1543, 2164
TaqI TCGA 8 cut(s) 84, 486, 1435, 1469, 1758, 2058, 2760, 3177
TaqII GACCGA 1 cut(s) 750
TatI WGTACW 2 cut(s) 2780, 3085
TauI GCSGC 1 cut(s) 343
TscAI CASTG 4 cut(s) 79, 1655, 3328, 3448
TseFI GTSAC 2 cut(s) 1372, 2623
TseI GCWGC 3 cut(s) 182, 446, 863
Tsp45I GTSAC 2 cut(s) 1372, 2623
TspGWI ACGGA 3 cut(s) 538, 1161, 3195
TspRI CASTG 4 cut(s) 79, 1655, 3328, 3448
Van91I CCANNNNNTGG 2 cut(s) 1615, 3106
Vha464I CTTAAG 1 cut(s) 1777
VpaK11BI GGWCC 3 cut(s) 301, 971, 1711
XapI RAATTY 9 cut(s) 117, 1795, 1870, 1981, 2600, 2812, 3019, 3233, 3332
XceI RCATGY 2 cut(s) 673, 1882
XcmI CCANNNNNNNNNTGG 2 cut(s) 820, 2003
XhoI CTCGAG 1 cut(s) 2057
XmiI GTMKAC 1 cut(s) 554
XmnI GAANNNNTTC 7 cut(s) 592, 804, 1074, 1506, 1600, 2912, 2949
XspI CTAG 4 cut(s) 701, 785, 1385, 3511
Zsp2I ATGCAT 4 cut(s) 281, 439, 1476, 3130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.