Rw6G002240

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000105
Physical Location & Seq
Forward (+)
3594906 .. 3596772
1867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G002240.1

Sequence Viewer

Length: 1152 bp
ATGCATGATTTGCTACAAGAAATGGGCCGGGAAATAGTTCGTCGAGAGTCTCTGAAAGAGCCAGGCAAACGTAGTAGATTATGGTCTCGTGAAGAAATCCACAATGTGCTGAAGAAAAATAAGGGAACAGAAGCAATCCAAGGCATGGTAATGGAGTGGTCTGAATTAGAAGTGGCTCATTGGAATCCAGAAGCCTTGTCAAATTTGTCTCAACTTATTCTTCTCCATATTCATAATGTGGACCTTCCTAAAGGCCTTACCTGTCTTCCTAATTCCTTGAGACTCCTGGAATGGCCTGGCTGTCCGTTAAGATCTCTCCCACGAACGTTCGAACCAGATGAACTTATTGAACTTAACTTGTGTCACAGCAATATTGAACATCTTTGGAAGGGAACAAAGAATTTTAACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAACATTGTGGAGATCCCAGACCTTGCAGGTGTTCAGAATCTTGAGAGTTTAGAGCTCGAAGGATGTAAGAGTTTGATTCCCGAGTTTGATGGAAATATGGAGCGTCTGTCTGTGCTTCATCTTGACGGGACTGCCATTGAGGGACTGCCTGTTTCAATTGGACGCCTGAGTGGCCTTGTGTCATTGAATCTAAGTAAGTGCAGAAATCTTGTTTGTCTTCCAAGCACCATCGTTCATTTATGCAAAGTAGTTTGGGGATCTTTAAATAAGTTCTTGCCTTCTGGATTGCAAAAAGTGAATGGAGAGCCAATGAGTTTCAGCTTGCCTAGGCTGTGTAATTTAACAGATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAATGAATTCAGTTACTTTCCCTCTTTGGTGACCTTGAATATAAGTGGAAACAATTTTGTTCGTCTTCCTTCAGGCATTGGGTCGCTTTCCAAGCTTGAGTACTGTTTCAATTTCATGAATTGCGTCAATCTAAAGGGCAATCAAGGATGCAATAGCATGGCATTTGAAATGCTGAAGGCAGTCATGTATCAGGGACTCTCTAGTGAGACGAAAACTATTCGAATTGTAATTCCTGGAAGTAATATTCCTGAGTGGTTCAGCCATCGAAGTGTTGGGTGTTCAGTATGTGTAGAGCTGCCTCCAGATTGGGATAGCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

383

Amino Acids

42.86

Weight (kDa)

6.28

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 146 - 232 1.1e-07 Leucine-rich repeat region
LRR_13 PF23286 160 - 326 3.9e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 458
AccB7I CCANNNNNTGG 1 cut(s) 145
AclI AACGTT 1 cut(s) 326
AclWI GGATC 2 cut(s) 448, 706
AcsI RAATTY 3 cut(s) 202, 400, 836
AcuI CTGAAG 3 cut(s) 131, 885, 1025
AcyI GRCGYC 1 cut(s) 604
AdeI CACNNNGTG 1 cut(s) 106
AfaI GTAC 1 cut(s) 932
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 8 cut(s) 350, 377, 415, 597, 628, 868, 940, 998
AjnI CCWGG 4 cut(s) 61, 285, 295, 1063
AluBI AGCT 4 cut(s) 496, 762, 925, 1126
AluI AGCT 4 cut(s) 496, 762, 925, 1126
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 5 cut(s) 54, 90, 213, 274, 1031
AlwI GGATC 2 cut(s) 448, 706
Ama87I CYCGRG 1 cut(s) 521
AoxI GGCC 4 cut(s) 25, 253, 293, 613
ApeKI GCWGC 1 cut(s) 1126
ApoI RAATTY 3 cut(s) 202, 400, 836
Asp700I GAANNNNTTC 1 cut(s) 36
AspA2I CCTAGG 1 cut(s) 767
AspS9I GGNCC 2 cut(s) 25, 241
AsuC2I CCSGG 1 cut(s) 29
AsuHPI GGTGA 2 cut(s) 827, 871
AsuII TTCGAA 2 cut(s) 330, 1051
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 1 cut(s) 241
AvrII CCTAGG 1 cut(s) 767
BanII GRGCYC 1 cut(s) 498
BauI CACGAG 1 cut(s) 87
BbsI GAAGAC 3 cut(s) 257, 650, 887
Bbv12I GWGCWC 1 cut(s) 498
BbvI GCAGC 1 cut(s) 1113
BccI CCATC 3 cut(s) 524, 677, 1101
BciT130I CCWGG 4 cut(s) 63, 287, 297, 1065
BcnI CCSGG 1 cut(s) 29
BcoDI GTCTC 5 cut(s) 54, 90, 213, 274, 1031
BfaI CTAG 2 cut(s) 768, 1032
BfuAI ACCTGC 1 cut(s) 458
BglI GCCNNNNNGGC 1 cut(s) 612
BglII AGATCT 2 cut(s) 311, 787
BisI GCNGC 1 cut(s) 1127
BlnI CCTAGG 1 cut(s) 767
BlsI GCNGC 1 cut(s) 1128
BmcAI AGTACT 1 cut(s) 932
Bme1390I CCNGG 5 cut(s) 29, 63, 287, 297, 1065
Bme18I GGWCC 1 cut(s) 241
BmeT110I CYCGRG 1 cut(s) 521
BmgT120I GGNCC 2 cut(s) 25, 241
BmrFI CCNGG 5 cut(s) 29, 63, 287, 297, 1065
BmsI GCATC 1 cut(s) 968
BpiI GAAGAC 3 cut(s) 257, 650, 887
BpmI CTGGAG 1 cut(s) 1116
Bpu14I TTCGAA 2 cut(s) 330, 1051
BpuEI CTTGAG 3 cut(s) 298, 503, 947
BpuMI CCSGG 1 cut(s) 29
BsaHI GRCGYC 1 cut(s) 604
BsaI GGTCTC 1 cut(s) 90
BsaJI CCNNGG 2 cut(s) 139, 767
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 1 cut(s) 145
BseBI CCWGG 4 cut(s) 63, 287, 297, 1065
BseDI CCNNGG 2 cut(s) 139, 767
BseGI GGATG 2 cut(s) 509, 983
BseLI CCNNNNNNNGG 1 cut(s) 145
BseMII CTCAG 3 cut(s) 599, 788, 1071
BseXI GCAGC 1 cut(s) 1113
BsgI GTGCAG 1 cut(s) 661
BshFI GGCC 4 cut(s) 27, 255, 295, 615
BsiHKAI GWGCWC 1 cut(s) 498
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 1 cut(s) 28
BslFI GGGAC 3 cut(s) 583, 597, 1038
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 5 cut(s) 54, 90, 213, 274, 1031
BsmBI CGTCTC 1 cut(s) 1031
BsmFI GGGAC 3 cut(s) 583, 597, 1038
BsnI GGCC 4 cut(s) 27, 255, 295, 615
Bso31I GGTCTC 1 cut(s) 90
BsoBI CYCGRG 1 cut(s) 521
Bsp119I TTCGAA 2 cut(s) 330, 1051
Bsp1286I GDGCHC 1 cut(s) 498
Bsp143I GATC 4 cut(s) 311, 453, 698, 787
BspANI GGCC 4 cut(s) 27, 255, 295, 615
BspCNI CTCAG 3 cut(s) 600, 789, 1072
BspHI TCATGA 1 cut(s) 945
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 2 cut(s) 448, 706
BspT104I TTCGAA 2 cut(s) 330, 1051
BspTNI GGTCTC 1 cut(s) 90
BssECI CCNNGG 2 cut(s) 139, 767
BssMI GATC 4 cut(s) 311, 453, 698, 787
BssNI GRCGYC 1 cut(s) 604
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 2 cut(s) 139, 767
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 4 cut(s) 63, 287, 297, 1065
Bst4CI ACNGT 1 cut(s) 935
BstACI GRCGYC 1 cut(s) 604
BstAPI GCANNNNNTGC 1 cut(s) 10
BstBI TTCGAA 2 cut(s) 330, 1051
BstC8I GCNNGC 1 cut(s) 764
BstDEI CTNAG 4 cut(s) 608, 632, 797, 1080
BstEII GGTNACC 1 cut(s) 859
BstF5I GGATG 2 cut(s) 509, 983
BstKTI GATC 4 cut(s) 314, 456, 701, 790
BstMAI GTCTC 5 cut(s) 54, 90, 213, 274, 1031
BstMBI GATC 4 cut(s) 311, 453, 698, 787
BstMWI GCNNNNNNNGC 3 cut(s) 10, 612, 922
BstNI CCWGG 4 cut(s) 63, 287, 297, 1065
BstPI GGTNACC 1 cut(s) 859
BstSCI CCNGG 5 cut(s) 27, 61, 285, 295, 1063
BstV1I GCAGC 1 cut(s) 1113
BstV2I GAAGAC 3 cut(s) 257, 650, 887
BstX2I RGATCY 4 cut(s) 311, 453, 698, 787
BstYI RGATCY 4 cut(s) 311, 453, 698, 787
BsuRI GGCC 4 cut(s) 27, 255, 295, 615
BtsCI GGATG 2 cut(s) 509, 983
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 1 cut(s) 764
CciI TCATGA 1 cut(s) 945
Cfr13I GGNCC 2 cut(s) 25, 241
CseI GACGC 3 cut(s) 533, 612, 943
Csp6I GTAC 1 cut(s) 931
CviAII CATG 6 cut(s) 5, 145, 946, 988, 1015, 1149
CviQI GTAC 1 cut(s) 931
DdeI CTNAG 4 cut(s) 608, 632, 797, 1080
DpnI GATC 4 cut(s) 313, 455, 700, 789
DpnII GATC 4 cut(s) 311, 453, 698, 787
DraI TTTAAA 1 cut(s) 705
DraIII CACNNNGTG 1 cut(s) 106
Ecl136II GAGCTC 1 cut(s) 496
Eco130I CCWWGG 2 cut(s) 139, 767
Eco147I AGGCCT 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 498
Eco31I GGTCTC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 496
Eco57I CTGAAG 3 cut(s) 131, 885, 1025
Eco88I CYCGRG 1 cut(s) 521
Eco91I GGTNACC 1 cut(s) 859
EcoICRI GAGCTC 1 cut(s) 496
EcoO65I GGTNACC 1 cut(s) 859
EcoRI GAATTC 1 cut(s) 836
EcoRII CCWGG 4 cut(s) 61, 285, 295, 1063
EcoT14I CCWWGG 2 cut(s) 139, 767
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 498
ErhI CCWWGG 2 cut(s) 139, 767
Esp3I CGTCTC 1 cut(s) 1031
FaeI CATG 6 cut(s) 8, 148, 949, 991, 1018, 1152
FaqI GGGAC 3 cut(s) 583, 597, 1038
FatI CATG 6 cut(s) 4, 144, 945, 987, 1014, 1148
Fnu4HI GCNGC 1 cut(s) 1127
FokI GGATG 2 cut(s) 516, 990
FriOI GRGCYC 1 cut(s) 498
Fsp4HI GCNGC 1 cut(s) 1127
FspBI CTAG 2 cut(s) 768, 1032
GluI GCNGC 1 cut(s) 1127
GsuI CTGGAG 1 cut(s) 1116
HaeIII GGCC 4 cut(s) 27, 255, 295, 615
HapII CCGG 1 cut(s) 28
HgaI GACGC 3 cut(s) 533, 612, 943
Hin1I GRCGYC 1 cut(s) 604
Hin1II CATG 6 cut(s) 8, 148, 949, 991, 1018, 1152
HindIII AAGCTT 1 cut(s) 923
HinfI GANTC 7 cut(s) 47, 184, 282, 478, 517, 628, 1026
HpaII CCGG 1 cut(s) 28
HphI GGTGA 2 cut(s) 827, 871
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 4 cut(s) 54, 163, 477, 792
Hpy8I GTNNAC 1 cut(s) 241
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 7 cut(s) 254, 382, 494, 729, 812, 909, 1000
HpyCH4III ACNGT 1 cut(s) 935
HpyCH4IV ACGT 2 cut(s) 70, 326
HpyCH4V TGCA 7 cut(s) 4, 467, 642, 684, 730, 807, 981
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 612, 922
HpyF3I CTNAG 4 cut(s) 608, 632, 797, 1080
HpySE526I ACGT 2 cut(s) 70, 326
Hsp92I GRCGYC 1 cut(s) 604
Hsp92II CATG 6 cut(s) 8, 148, 949, 991, 1018, 1152
Kzo9I GATC 4 cut(s) 311, 453, 698, 787
LmnI GCTCC 2 cut(s) 541, 821
Lsp1109I GCAGC 1 cut(s) 1113
LweI GCATC 1 cut(s) 968
MaeI CTAG 2 cut(s) 768, 1032
MaeII ACGT 2 cut(s) 70, 326
MaeIII GTNAC 3 cut(s) 362, 842, 859
MalI GATC 4 cut(s) 313, 455, 700, 789
MboI GATC 4 cut(s) 311, 453, 698, 787
MboII GAAGA 6 cut(s) 104, 124, 212, 257, 650, 887
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 4 cut(s) 311, 453, 698, 787
MhlI GDGCHC 1 cut(s) 498
MlyI GAGTC 3 cut(s) 56, 276, 1020
MnlI CCTC 3 cut(s) 574, 862, 1140
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 36
MseI TTAA 5 cut(s) 308, 354, 405, 704, 782
MslI CAYNNNNRTG 2 cut(s) 149, 1098
MspI CCGG 1 cut(s) 28
MspR9I CCNGG 5 cut(s) 29, 63, 287, 297, 1065
MunI CAATTG 1 cut(s) 597
MvaI CCWGG 4 cut(s) 63, 287, 297, 1065
MwoI GCNNNNNNNGC 3 cut(s) 10, 612, 922
NciI CCSGG 1 cut(s) 29
NdeII GATC 4 cut(s) 311, 453, 698, 787
NlaIII CATG 6 cut(s) 8, 148, 949, 991, 1018, 1152
NmuCI GTSAC 2 cut(s) 362, 859
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 2 cut(s) 330, 1051
PagI TCATGA 1 cut(s) 945
PaqCI CACCTGC 1 cut(s) 458
PceI AGGCCT 1 cut(s) 255
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 4 cut(s) 184, 478, 517, 628
PflMI CCANNNNNTGG 1 cut(s) 145
PfoI TCCNGGA 2 cut(s) 285, 1063
PkrI GCNGC 1 cut(s) 1128
PleI GAGTC 3 cut(s) 55, 276, 1020
PpsI GAGTC 3 cut(s) 55, 276, 1020
Psp124BI GAGCTC 1 cut(s) 498
Psp1406I AACGTT 1 cut(s) 326
Psp6I CCWGG 4 cut(s) 61, 285, 295, 1063
PspEI GGTNACC 1 cut(s) 859
PspGI CCWGG 4 cut(s) 61, 285, 295, 1063
PspPI GGNCC 2 cut(s) 25, 241
PsuI RGATCY 4 cut(s) 311, 453, 698, 787
RsaI GTAC 1 cut(s) 932
RsaNI GTAC 1 cut(s) 931
RseI CAYNNNNRTG 2 cut(s) 149, 1098
SacI GAGCTC 1 cut(s) 498
SaqAI TTAA 5 cut(s) 308, 354, 405, 704, 782
SatI GCNGC 1 cut(s) 1127
Sau3AI GATC 4 cut(s) 311, 453, 698, 787
Sau96I GGNCC 2 cut(s) 25, 241
ScaI AGTACT 1 cut(s) 932
SchI GAGTC 3 cut(s) 56, 276, 1020
ScrFI CCNGG 5 cut(s) 29, 63, 287, 297, 1065
SduI GDGCHC 1 cut(s) 498
SfaNI GCATC 1 cut(s) 968
SfuI TTCGAA 2 cut(s) 330, 1051
SinI GGWCC 1 cut(s) 241
SmiMI CAYNNNNRTG 2 cut(s) 149, 1098
SmlI CTYRAG 3 cut(s) 277, 482, 926
SmoI CTYRAG 3 cut(s) 277, 482, 926
SseBI AGGCCT 1 cut(s) 255
SspI AATATT 2 cut(s) 373, 1075
SspMI CTAG 2 cut(s) 768, 1032
SstI GAGCTC 1 cut(s) 498
StuI AGGCCT 1 cut(s) 255
StyD4I CCNGG 5 cut(s) 27, 61, 285, 295, 1063
StyI CCWWGG 2 cut(s) 139, 767
TaaI ACNGT 1 cut(s) 935
TaiI ACGT 2 cut(s) 73, 329
TaqI TCGA 5 cut(s) 43, 330, 498, 1051, 1096
TatI WGTACW 1 cut(s) 930
TfiI GAWTC 4 cut(s) 184, 478, 517, 628
Tru1I TTAA 5 cut(s) 308, 354, 405, 704, 782
Tru9I TTAA 5 cut(s) 308, 354, 405, 704, 782
TseFI GTSAC 2 cut(s) 362, 859
TseI GCWGC 1 cut(s) 1126
Tsp45I GTSAC 2 cut(s) 362, 859
TspDTI ATGAA 8 cut(s) 221, 354, 409, 548, 665, 849, 934, 962
TspGWI ACGGA 1 cut(s) 294
Van91I CCANNNNNTGG 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 241
XapI RAATTY 3 cut(s) 202, 400, 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 1100
XmaJI CCTAGG 1 cut(s) 767
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 2 cut(s) 768, 1032
ZrmI AGTACT 1 cut(s) 932
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.