Rmu_sc0003144.1_g000013

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003144.1
OG0000123
Physical Location & Seq
Reverse (-)
74012 .. 75302
1291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003144.1_g000013.1.cds

Sequence Viewer

Length: 1023 bp
atggcggaggagaacgcggtggctccttctgcactttctgaggaggccattgtgagccttgttggaggagaggatgcaatccatgatttatttttctacctttgtggtcggcttttatctaagaagacagtggatagaaaggtgaagaatcagattctcttaggcggtccatggttctacaacaactctatgttactgttggcagactatgacgacgtttcagctctcgaggcgacttcgcggtatctcctggaggtttgggtggcggtgaaggggttgtgcattgctatgcgcaacgagaaggccttaaccctaattggacgagcgttgggttccttcattaaggttgatcagaaggtggtgcaacgaaaggatcctattcaaaggatctgtgtgtatgaaaaatgtcatgggttgtgttcggcttctggcttctttggtcatggagggggtatatgtgatggcagattagaggcggaggcggaggcgcatgcagcactggttctagcggggtcggaccacgcagtggaagcaaacccaggtgggttagcggtgtcggaagcggcggtttctgggttggttgttatatcagagatgccggcaccgggactggatgcgccggaggtttctggggtggcagaagtggctggaacgttggtgttgggatcgggttcccctgttgcggggcgtgtagagctcattccggaaaaatcagcgggaaaccctaattttgaattagggttgaccgctgggttaattaggactagtcagcatggtcttgggccgggtctgcttgggattgggctgggtctgcatgggactgggccgaatttctttgctgatggggccaatataaagggccttgctgttgggattaattcagaaaaacatcttatcttggctctaaagaaaaaaggtcgtcctgttggacgaaggaataagcgtactttgaaagatgaaggtaagaatgctggtgcaaatatcagctccaactcgccagggaaggagctagctattgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

340

Amino Acids

35.36

Weight (kDa)

6.46

Isoelectric Point (pI)

27.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 293
AccB1I GGYRCC 1 cut(s) 601
AccB7I CCANNNNNTGG 1 cut(s) 526
AccII CGCG 2 cut(s) 17, 241
AccIII TCCGGA 1 cut(s) 703
AclI AACGTT 1 cut(s) 653
AclWI GGATC 4 cut(s) 368, 381, 395, 673
AcsI RAATTY 1 cut(s) 829
AdeI CACNNNGTG 1 cut(s) 526
AfaI GTAC 1 cut(s) 946
AfiI CCNNNNNNNGG 4 cut(s) 526, 605, 682, 683
AgsI TTSAA 3 cut(s) 383, 734, 952
AhlI ACTAGT 1 cut(s) 764
AjnI CCWGG 3 cut(s) 249, 538, 997
AluBI AGCT 5 cut(s) 224, 697, 987, 1009, 1013
AluI AGCT 5 cut(s) 224, 697, 987, 1009, 1013
Alw21I GWGCWC 1 cut(s) 699
AlwI GGATC 4 cut(s) 368, 381, 395, 673
Ama87I CYCGRG 1 cut(s) 227
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 6 cut(s) 45, 303, 782, 824, 846, 859
ApeKI GCWGC 1 cut(s) 494
ApoI RAATTY 1 cut(s) 829
AseI ATTAAT 1 cut(s) 876
AspLEI GCGC 3 cut(s) 294, 490, 619
AspS9I GGNCC 6 cut(s) 167, 517, 782, 824, 846, 859
AsuC2I CCSGG 2 cut(s) 606, 786
AsuHPI GGTGA 2 cut(s) 154, 280
AsuNHI GCTAGC 1 cut(s) 1009
AvaI CYCGRG 1 cut(s) 227
AvaII GGWCC 2 cut(s) 167, 517
BamHI GGATCC 1 cut(s) 373
BanI GGYRCC 1 cut(s) 601
BanII GRGCYC 1 cut(s) 699
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 699
BbvI GCAGC 1 cut(s) 506
BccI CCATC 2 cut(s) 455, 836
BciT130I CCWGG 3 cut(s) 251, 540, 999
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 2 cut(s) 606, 786
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 3 cut(s) 506, 765, 1010
BisI GCNGC 2 cut(s) 495, 564
BlsI GCNGC 2 cut(s) 496, 565
Bme1390I CCNGG 5 cut(s) 251, 540, 606, 786, 999
Bme18I GGWCC 2 cut(s) 167, 517
BmeT110I CYCGRG 1 cut(s) 227
BmgT120I GGNCC 6 cut(s) 167, 517, 782, 824, 846, 859
BmiI GGNNCC 6 cut(s) 24, 334, 375, 603, 673, 847
BmrFI CCNGG 5 cut(s) 251, 540, 606, 786, 999
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 3 cut(s) 64, 585, 604
BmtI GCTAGC 1 cut(s) 1013
BmuI ACTGGG 1 cut(s) 831
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 606, 786
BsaJI CCNNGG 3 cut(s) 170, 538, 998
BsaWI WCCGGW 1 cut(s) 703
Bsc4I CCNNNNNNNGG 4 cut(s) 526, 605, 682, 683
Bse118I RCCGGY 1 cut(s) 598
Bse1I ACTGG 3 cut(s) 504, 615, 826
Bse3DI GCAATG 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 3 cut(s) 251, 540, 999
BseDI CCNNGG 3 cut(s) 170, 538, 998
BseGI GGATG 2 cut(s) 79, 619
BseLI CCNNNNNNNGG 4 cut(s) 526, 605, 682, 683
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 3 cut(s) 504, 615, 826
BseRI GAGGAG 3 cut(s) 23, 56, 81
BseXI GCAGC 1 cut(s) 506
BseYI CCCAGC 2 cut(s) 749, 805
BsgI GTGCAG 1 cut(s) 15
Bsh1236I CGCG 2 cut(s) 17, 241
BshFI GGCC 6 cut(s) 47, 305, 784, 826, 848, 861
BshNI GGYRCC 1 cut(s) 601
BsiHKAI GWGCWC 1 cut(s) 699
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 5 cut(s) 599, 605, 620, 704, 785
BslFI GGGAC 2 cut(s) 621, 832
BslI CCNNNNNNNGG 4 cut(s) 526, 605, 682, 683
BsmFI GGGAC 2 cut(s) 621, 832
BsmI GAATGC 1 cut(s) 973
BsnI GGCC 6 cut(s) 47, 305, 784, 826, 848, 861
BsoBI CYCGRG 1 cut(s) 227
Bsp1286I GDGCHC 1 cut(s) 699
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 4 cut(s) 349, 373, 387, 665
Bsp19I CCATGG 1 cut(s) 170
BspANI GGCC 6 cut(s) 47, 305, 784, 826, 848, 861
BspCNI CTCAG 1 cut(s) 31
BspEI TCCGGA 1 cut(s) 703
BspFNI CGCG 2 cut(s) 17, 241
BspLI GGNNCC 6 cut(s) 24, 334, 375, 603, 673, 847
BspOI GCTAGC 1 cut(s) 1013
BspPI GGATC 4 cut(s) 368, 381, 395, 673
BspT107I GGYRCC 1 cut(s) 601
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 1 cut(s) 598
BsrI ACTGG 3 cut(s) 504, 615, 826
BssAI RCCGGY 1 cut(s) 598
BssECI CCNNGG 3 cut(s) 170, 538, 998
BssMI GATC 4 cut(s) 349, 373, 387, 665
BssT1I CCWWGG 1 cut(s) 170
Bst2UI CCWGG 3 cut(s) 251, 540, 999
Bst4CI ACNGT 2 cut(s) 130, 198
BstC8I GCNNGC 3 cut(s) 492, 600, 1011
BstDEI CTNAG 3 cut(s) 39, 120, 160
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 2 cut(s) 79, 619
BstFNI CGCG 2 cut(s) 17, 241
BstHHI GCGC 3 cut(s) 294, 490, 619
BstKTI GATC 4 cut(s) 352, 376, 390, 668
BstMBI GATC 4 cut(s) 349, 373, 387, 665
BstMWI GCNNNNNNNGC 9 cut(s) 29, 230, 494, 530, 644, 694, 790, 811, 845
BstNI CCWGG 3 cut(s) 251, 540, 999
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 5 cut(s) 249, 538, 604, 784, 997
BstUI CGCG 2 cut(s) 17, 241
BstV1I GCAGC 1 cut(s) 506
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 2 cut(s) 373, 387
BstYI RGATCY 2 cut(s) 373, 387
BsuRI GGCC 6 cut(s) 47, 305, 784, 826, 848, 861
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 2 cut(s) 79, 619
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 3 cut(s) 135, 497, 531
Cac8I GCNNGC 3 cut(s) 492, 600, 1011
CfoI GCGC 3 cut(s) 294, 490, 619
Cfr10I RCCGGY 1 cut(s) 598
Cfr13I GGNCC 6 cut(s) 167, 517, 782, 824, 846, 859
Csp6I GTAC 1 cut(s) 945
CviAII CATG 7 cut(s) 83, 171, 410, 443, 491, 773, 815
CviQI GTAC 1 cut(s) 945
DdeI CTNAG 3 cut(s) 39, 120, 160
DpnI GATC 4 cut(s) 351, 375, 389, 667
DpnII GATC 4 cut(s) 349, 373, 387, 665
DraIII CACNNNGTG 1 cut(s) 526
EciI GGCGGA 3 cut(s) 20, 491, 497
Ecl136II GAGCTC 1 cut(s) 697
Eco130I CCWWGG 1 cut(s) 170
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 1 cut(s) 699
Eco47I GGWCC 2 cut(s) 167, 517
Eco53kI GAGCTC 1 cut(s) 697
Eco88I CYCGRG 1 cut(s) 227
EcoICRI GAGCTC 1 cut(s) 697
EcoO109I RGGNCCY 1 cut(s) 859
EcoRII CCWGG 3 cut(s) 249, 538, 997
EcoT14I CCWWGG 1 cut(s) 170
EcoT38I GRGCYC 1 cut(s) 699
ErhI CCWWGG 1 cut(s) 170
FaeI CATG 7 cut(s) 86, 174, 413, 446, 494, 776, 818
FaqI GGGAC 2 cut(s) 621, 832
FatI CATG 7 cut(s) 82, 170, 409, 442, 490, 772, 814
FauI CCCGC 3 cut(s) 502, 676, 709
FbaI TGATCA 1 cut(s) 349
Fnu4HI GCNGC 2 cut(s) 495, 564
FokI GGATG 2 cut(s) 86, 626
FriOI GRGCYC 1 cut(s) 699
Fsp4HI GCNGC 2 cut(s) 495, 564
FspBI CTAG 3 cut(s) 506, 765, 1010
FspI TGCGCA 1 cut(s) 293
GlaI GCGC 3 cut(s) 293, 489, 618
GluI GCNGC 2 cut(s) 495, 564
GsaI CCCAGC 2 cut(s) 753, 809
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 6 cut(s) 47, 305, 784, 826, 848, 861
HapII CCGG 5 cut(s) 599, 605, 620, 704, 785
HhaI GCGC 3 cut(s) 294, 490, 619
Hin1II CATG 7 cut(s) 86, 174, 413, 446, 494, 776, 818
Hin6I GCGC 3 cut(s) 292, 488, 617
HinP1I GCGC 3 cut(s) 292, 488, 617
HincII GTYRAC 1 cut(s) 744
HindII GTYRAC 1 cut(s) 744
HinfI GANTC 2 cut(s) 148, 154
HpaII CCGG 5 cut(s) 599, 605, 620, 704, 785
HphI GGTGA 2 cut(s) 154, 280
Hpy166II GTNNAC 1 cut(s) 744
Hpy188I TCNGA 7 cut(s) 40, 153, 354, 517, 559, 592, 883
Hpy188III TCNNGA 2 cut(s) 227, 704
Hpy8I GTNNAC 1 cut(s) 744
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 8 cut(s) 36, 265, 295, 346, 349, 927, 953, 997
HpyCH4III ACNGT 2 cut(s) 130, 198
HpyCH4IV ACGT 2 cut(s) 216, 653
HpyCH4V TGCA 7 cut(s) 32, 77, 282, 364, 494, 814, 977
HpyF10VI GCNNNNNNNGC 9 cut(s) 29, 230, 494, 530, 644, 694, 790, 811, 845
HpyF3I CTNAG 3 cut(s) 39, 120, 160
HpySE526I ACGT 2 cut(s) 216, 653
Hsp92II CATG 7 cut(s) 86, 174, 413, 446, 494, 776, 818
HspAI GCGC 3 cut(s) 292, 488, 617
Kpn2I TCCGGA 1 cut(s) 703
KroI GCCGGC 1 cut(s) 598
KroNI GCCGGC 1 cut(s) 600
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 4 cut(s) 349, 373, 387, 665
LmnI GCTCC 3 cut(s) 28, 992, 1006
Lsp1109I GCAGC 1 cut(s) 506
LweI GCATC 3 cut(s) 64, 585, 604
MaeI CTAG 3 cut(s) 506, 765, 1010
MaeII ACGT 2 cut(s) 216, 653
MaeIII GTNAC 1 cut(s) 192
MalI GATC 4 cut(s) 351, 375, 389, 667
MboI GATC 4 cut(s) 349, 373, 387, 665
MboII GAAGA 2 cut(s) 136, 157
MflI RGATCY 2 cut(s) 373, 387
MhlI GDGCHC 1 cut(s) 699
MluCI AATT 6 cut(s) 315, 727, 734, 756, 829, 877
MmeI TCCRAC 5 cut(s) 43, 495, 537, 907, 1014
MroI TCCGGA 1 cut(s) 703
MroNI GCCGGC 1 cut(s) 598
MseI TTAA 5 cut(s) 308, 342, 755, 876, 1021
MslI CAYNNNNRTG 1 cut(s) 287
MspA1I CMGCKG 2 cut(s) 716, 749
MspI CCGG 5 cut(s) 599, 605, 620, 704, 785
MspR9I CCNGG 5 cut(s) 251, 540, 606, 786, 999
Mva1269I GAATGC 1 cut(s) 973
MvaI CCWGG 3 cut(s) 251, 540, 999
MvnI CGCG 2 cut(s) 17, 241
MwoI GCNNNNNNNGC 9 cut(s) 29, 230, 494, 530, 644, 694, 790, 811, 845
NaeI GCCGGC 1 cut(s) 600
NciI CCSGG 2 cut(s) 606, 786
NcoI CCATGG 1 cut(s) 170
NdeII GATC 4 cut(s) 349, 373, 387, 665
NgoMIV GCCGGC 1 cut(s) 598
NheI GCTAGC 1 cut(s) 1009
NlaIII CATG 7 cut(s) 86, 174, 413, 446, 494, 776, 818
NlaIV GGNNCC 6 cut(s) 24, 334, 375, 603, 673, 847
NsbI TGCGCA 1 cut(s) 293
NspI RCATGY 1 cut(s) 494
PaeI GCATGC 1 cut(s) 494
PaeR7I CTCGAG 1 cut(s) 227
PceI AGGCCT 1 cut(s) 305
PctI GAATGC 1 cut(s) 973
PdiI GCCGGC 1 cut(s) 600
PfeI GAWTC 2 cut(s) 148, 154
PflMI CCANNNNNTGG 1 cut(s) 526
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 2 cut(s) 496, 565
PshBI ATTAAT 1 cut(s) 876
Psp124BI GAGCTC 1 cut(s) 699
Psp1406I AACGTT 1 cut(s) 653
Psp6I CCWGG 3 cut(s) 249, 538, 997
PspFI CCCAGC 2 cut(s) 749, 805
PspGI CCWGG 3 cut(s) 249, 538, 997
PspN4I GGNNCC 6 cut(s) 24, 334, 375, 603, 673, 847
PspPI GGNCC 6 cut(s) 167, 517, 782, 824, 846, 859
PsuI RGATCY 2 cut(s) 373, 387
RsaI GTAC 1 cut(s) 946
RsaNI GTAC 1 cut(s) 945
RseI CAYNNNNRTG 1 cut(s) 287
SacI GAGCTC 1 cut(s) 699
SaqAI TTAA 5 cut(s) 308, 342, 755, 876, 1021
SatI GCNGC 2 cut(s) 495, 564
Sau3AI GATC 4 cut(s) 349, 373, 387, 665
Sau96I GGNCC 6 cut(s) 167, 517, 782, 824, 846, 859
ScrFI CCNGG 5 cut(s) 251, 540, 606, 786, 999
SduI GDGCHC 1 cut(s) 699
SfaNI GCATC 3 cut(s) 64, 585, 604
Sfr274I CTCGAG 1 cut(s) 227
SinI GGWCC 2 cut(s) 167, 517
SlaI CTCGAG 1 cut(s) 227
SmiMI CAYNNNNRTG 1 cut(s) 287
SmlI CTYRAG 1 cut(s) 227
SmoI CTYRAG 1 cut(s) 227
SpeI ACTAGT 1 cut(s) 764
SphI GCATGC 1 cut(s) 494
Sse9I AATT 6 cut(s) 315, 727, 734, 756, 829, 877
SseBI AGGCCT 1 cut(s) 305
SspMI CTAG 3 cut(s) 506, 765, 1010
SstI GAGCTC 1 cut(s) 699
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 5 cut(s) 249, 538, 604, 784, 997
StyI CCWWGG 1 cut(s) 170
TaaI ACNGT 2 cut(s) 130, 198
TaiI ACGT 2 cut(s) 219, 656
TaqI TCGA 1 cut(s) 228
TasI AATT 6 cut(s) 315, 727, 734, 756, 829, 877
TauI GCSGC 1 cut(s) 566
TfiI GAWTC 2 cut(s) 148, 154
Tru1I TTAA 5 cut(s) 308, 342, 755, 876, 1021
Tru9I TTAA 5 cut(s) 308, 342, 755, 876, 1021
TscAI CASTG 3 cut(s) 135, 504, 531
TseI GCWGC 1 cut(s) 494
TspDTI ATGAA 3 cut(s) 328, 414, 972
TspRI CASTG 3 cut(s) 135, 504, 531
Van91I CCANNNNNTGG 1 cut(s) 526
VpaK11BI GGWCC 2 cut(s) 167, 517
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 1 cut(s) 829
XceI RCATGY 1 cut(s) 494
XhoI CTCGAG 1 cut(s) 227
XspI CTAG 3 cut(s) 506, 765, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.