Rmu_sc0035589.1_g000001

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035589.1
OG0000123
Physical Location & Seq
Reverse (-)
946 .. 1992
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035589.1_g000001.1.cds

Sequence Viewer

Length: 996 bp
atgttccaattcaaggagcaggaagtgaagcacagtgttattcatggcggcccatggtattatagcaattcgatgctattattgactgattatgacggtgtaggggctctggaagaggctcctctgcactttctggaggtgtgggtggcggtgactggcctgagagtggttatgcgcaatgtgcaggctctcacccagcttggcaacatgttgggcacttttgtgaaggctaatcatgtggcgttgcaaaggaaggaggctactcagaggatccgattgccggcagttttggtggagctggagttccgctatgaaaagtgtcgagggatttgtaagaggtgtggtttcttcacccatgatggaggggattgtgaccaaaagttggtgaaggaagtggcagtggaggacccggttctgcagtcgaaagctttacataaggagatattgccgtccaatggtacagtggaaataccgtcgtcgtctcttgctatggtggaggcgctgcagaccgggttggcgaatctggtaccggcgttgggctctagagccatccaggatatggaggcagggcaggatgctgcggggatggagttaagccctcaaatggcagccccgagttttttagcgagaacccctagtttcaaattagggttgacctctgggcttaggttgacctgtttgaaaggtgtcgggccgggttttgggccagttggacttggacctgaaggctctggacctattgctgatggtctccttaggcacccatctagggttttgggtatgaggaggcttcgggaggaggactggcttgaggatgggaagcgcctgaagttttttgaaggcttagccgatgttccagtcactaatgggaaagttccaaagaagaagggccgaccactcggtagtcgtaataagcccaaatctgtatccactttagtggtgatggatggggggtcgtcttcgaaggagctaaacgtcctacctcaagagggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

331

Amino Acids

35.89

Weight (kDa)

8.73

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 176
Acc65I GGTACC 1 cut(s) 526
AccB1I GGYRCC 2 cut(s) 526, 759
AccB7I CCANNNNNTGG 2 cut(s) 382, 559
AciI CCGC 4 cut(s) 48, 149, 307, 581
AclWI GGATC 2 cut(s) 265, 278
AcuI CTGAAG 2 cut(s) 744, 848
AfaI GTAC 2 cut(s) 460, 528
AflIII ACRYGT 1 cut(s) 207
AgsI TTSAA 4 cut(s) 13, 643, 682, 839
AjnI CCWGG 1 cut(s) 552
AleI CACNNNNGTG 2 cut(s) 221, 935
AloI GAACNNNNNNTCC 2 cut(s) 287, 319
AluBI AGCT 4 cut(s) 199, 298, 428, 970
AluI AGCT 4 cut(s) 199, 298, 428, 970
Alw26I GTCTC 2 cut(s) 486, 755
AlwI GGATC 2 cut(s) 265, 278
Ama87I CYCGRG 1 cut(s) 613
AoxI GGCC 5 cut(s) 49, 157, 692, 704, 889
ApeKI GCWGC 3 cut(s) 502, 578, 608
Asp718I GGTACC 1 cut(s) 526
AspLEI GCGC 3 cut(s) 177, 502, 825
AspS9I GGNCC 7 cut(s) 50, 406, 692, 704, 719, 734, 889
AsuC2I CCSGG 3 cut(s) 410, 511, 696
AsuHPI GGTGA 5 cut(s) 163, 184, 343, 397, 952
AsuII TTCGAA 1 cut(s) 962
AvaI CYCGRG 1 cut(s) 613
AvaII GGWCC 3 cut(s) 406, 719, 734
AxyI CCTNAGG 1 cut(s) 755
BaeGI GKGCMC 1 cut(s) 218
BaeI ACNNNNGTAYC 2 cut(s) 518, 551
BamHI GGATCC 1 cut(s) 270
BanI GGYRCC 2 cut(s) 526, 759
BanII GRGCYC 2 cut(s) 109, 542
BbsI GAAGAC 1 cut(s) 951
BbvI GCAGC 3 cut(s) 489, 565, 620
BccI CCATC 8 cut(s) 353, 557, 580, 740, 772, 809, 937, 941
BceAI ACGGC 1 cut(s) 433
BciT130I CCWGG 1 cut(s) 554
BciVI GTATCC 1 cut(s) 937
BcnI CCSGG 3 cut(s) 410, 511, 696
BcoDI GTCTC 2 cut(s) 486, 755
BfaI CTAG 4 cut(s) 543, 636, 768, 994
BfmI CTRYAG 2 cut(s) 416, 503
BfoI RGCGCY 2 cut(s) 503, 826
BfuI GTATCC 1 cut(s) 937
BisI GCNGC 4 cut(s) 49, 503, 579, 609
BlpI GCTNAGC 1 cut(s) 844
BlsI GCNGC 4 cut(s) 50, 504, 580, 610
Bme1390I CCNGG 4 cut(s) 410, 511, 554, 696
Bme18I GGWCC 3 cut(s) 406, 719, 734
BmeT110I CYCGRG 1 cut(s) 613
BmgT120I GGNCC 7 cut(s) 50, 406, 692, 704, 719, 734, 889
BmiI GGNNCC 5 cut(s) 120, 272, 408, 528, 761
BmrFI CCNGG 4 cut(s) 410, 511, 554, 696
BmsI GCATC 2 cut(s) 63, 565
BpiI GAAGAC 1 cut(s) 951
BpmI CTGGAG 2 cut(s) 155, 320
Bpu10I CCTNAGC 1 cut(s) 665
Bpu1102I GCTNAGC 1 cut(s) 844
Bpu14I TTCGAA 1 cut(s) 962
BpuEI CTTGAG 2 cut(s) 830, 969
BpuMI CCSGG 3 cut(s) 410, 511, 696
BsaI GGTCTC 1 cut(s) 755
BsaJI CCNNGG 1 cut(s) 53
BsaXI ACNNNNNCTCC 2 cut(s) 287, 317
Bse118I RCCGGY 2 cut(s) 280, 529
Bse1I ACTGG 4 cut(s) 160, 707, 809, 857
Bse21I CCTNAGG 1 cut(s) 755
Bse3DI GCAATG 1 cut(s) 184
BseBI CCWGG 1 cut(s) 554
BseDI CCNNGG 1 cut(s) 53
BseGI GGATG 5 cut(s) 549, 580, 591, 820, 952
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 2 cut(s) 152, 278
BseNI ACTGG 4 cut(s) 160, 707, 809, 857
BseRI GAGGAG 3 cut(s) 111, 799, 812
BseSI GKGCMC 1 cut(s) 218
BseXI GCAGC 3 cut(s) 489, 565, 620
BseYI CCCAGC 1 cut(s) 195
BsgI GTGCAG 2 cut(s) 110, 203
BshFI GGCC 5 cut(s) 51, 159, 694, 706, 891
BshNI GGYRCC 2 cut(s) 526, 759
BsiHKCI CYCGRG 1 cut(s) 613
BsiSI CCGG 5 cut(s) 281, 410, 510, 530, 695
BsmAI GTCTC 2 cut(s) 486, 755
BsmBI CGTCTC 1 cut(s) 486
BsnI GGCC 5 cut(s) 51, 159, 694, 706, 891
Bso31I GGTCTC 1 cut(s) 755
BsoBI CYCGRG 1 cut(s) 613
Bsp119I TTCGAA 1 cut(s) 962
Bsp1286I GDGCHC 3 cut(s) 109, 218, 542
Bsp143I GATC 1 cut(s) 270
Bsp1720I GCTNAGC 1 cut(s) 844
Bsp19I CCATGG 1 cut(s) 53
BspACI CCGC 4 cut(s) 48, 149, 307, 581
BspANI GGCC 5 cut(s) 51, 159, 694, 706, 891
BspCNI CTCAG 2 cut(s) 153, 277
BspLI GGNNCC 5 cut(s) 120, 272, 408, 528, 761
BspMAI CTGCAG 2 cut(s) 420, 507
BspPI GGATC 2 cut(s) 265, 278
BspT104I TTCGAA 1 cut(s) 962
BspT107I GGYRCC 2 cut(s) 526, 759
BspTNI GGTCTC 1 cut(s) 755
BsrDI GCAATG 1 cut(s) 184
BsrFI RCCGGY 2 cut(s) 280, 529
BsrI ACTGG 4 cut(s) 160, 707, 809, 857
BssAI RCCGGY 2 cut(s) 280, 529
BssECI CCNNGG 1 cut(s) 53
BssMI GATC 1 cut(s) 270
BssT1I CCWWGG 1 cut(s) 53
Bst2UI CCWGG 1 cut(s) 554
Bst4CI ACNGT 4 cut(s) 35, 98, 463, 474
Bst6I CTCTTC 1 cut(s) 108
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 2 cut(s) 186, 282
BstDEI CTNAG 5 cut(s) 161, 264, 665, 755, 844
BstDSI CCRYGG 1 cut(s) 53
BstF5I GGATG 5 cut(s) 549, 580, 591, 820, 952
BstH2I RGCGCY 2 cut(s) 503, 826
BstHHI GCGC 3 cut(s) 177, 502, 825
BstKTI GATC 1 cut(s) 273
BstMAI GTCTC 2 cut(s) 486, 755
BstMBI GATC 1 cut(s) 270
BstMWI GCNNNNNNNGC 1 cut(s) 181
BstNI CCWGG 1 cut(s) 554
BstNSI RCATGY 1 cut(s) 211
BstSCI CCNGG 4 cut(s) 408, 509, 552, 694
BstSFI CTRYAG 2 cut(s) 416, 503
BstSLI GKGCMC 1 cut(s) 218
BstV1I GCAGC 3 cut(s) 489, 565, 620
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 1 cut(s) 270
BstXI CCANNNNNNTGG 1 cut(s) 937
BstYI RGATCY 1 cut(s) 270
Bsu36I CCTNAGG 1 cut(s) 755
BsuI GTATCC 1 cut(s) 937
BsuRI GGCC 5 cut(s) 51, 159, 694, 706, 891
BtgI CCRYGG 1 cut(s) 53
BtsCI GGATG 5 cut(s) 549, 580, 591, 820, 952
BtsI GCAGTG 1 cut(s) 405
BtsIMutI CAGTG 3 cut(s) 40, 405, 468
Cac8I GCNNGC 2 cut(s) 186, 282
CfoI GCGC 3 cut(s) 177, 502, 825
Cfr10I RCCGGY 2 cut(s) 280, 529
Cfr13I GGNCC 7 cut(s) 50, 406, 692, 704, 719, 734, 889
Csp6I GTAC 2 cut(s) 459, 527
CviAII CATG 5 cut(s) 44, 54, 208, 236, 356
CviQI GTAC 2 cut(s) 459, 527
DdeI CTNAG 5 cut(s) 161, 264, 665, 755, 844
DpnI GATC 1 cut(s) 272
DpnII GATC 1 cut(s) 270
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
Eco130I CCWWGG 1 cut(s) 53
Eco24I GRGCYC 2 cut(s) 109, 542
Eco31I GGTCTC 1 cut(s) 755
Eco47I GGWCC 3 cut(s) 406, 719, 734
Eco57I CTGAAG 2 cut(s) 744, 848
Eco81I CCTNAGG 1 cut(s) 755
Eco88I CYCGRG 1 cut(s) 613
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 552
EcoT14I CCWWGG 1 cut(s) 53
EcoT38I GRGCYC 2 cut(s) 109, 542
ErhI CCWWGG 1 cut(s) 53
Esp3I CGTCTC 1 cut(s) 486
FaeI CATG 5 cut(s) 47, 57, 211, 239, 359
FatI CATG 5 cut(s) 43, 53, 207, 235, 355
FauI CCCGC 1 cut(s) 574
Fnu4HI GCNGC 4 cut(s) 49, 503, 579, 609
FokI GGATG 5 cut(s) 536, 587, 598, 827, 959
FriOI GRGCYC 2 cut(s) 109, 542
Fsp4HI GCNGC 4 cut(s) 49, 503, 579, 609
FspBI CTAG 4 cut(s) 543, 636, 768, 994
FspI TGCGCA 1 cut(s) 176
GlaI GCGC 3 cut(s) 176, 501, 824
GluI GCNGC 4 cut(s) 49, 503, 579, 609
GsaI CCCAGC 1 cut(s) 199
GsuI CTGGAG 2 cut(s) 155, 320
HaeII RGCGCY 2 cut(s) 503, 826
HaeIII GGCC 5 cut(s) 51, 159, 694, 706, 891
HapII CCGG 5 cut(s) 281, 410, 510, 530, 695
HhaI GCGC 3 cut(s) 177, 502, 825
Hin1II CATG 5 cut(s) 47, 57, 211, 239, 359
Hin6I GCGC 3 cut(s) 175, 500, 823
HinP1I GCGC 3 cut(s) 175, 500, 823
HincII GTYRAC 2 cut(s) 654, 672
HindII GTYRAC 2 cut(s) 654, 672
HindIII AAGCTT 1 cut(s) 426
HinfI GANTC 1 cut(s) 520
HpaII CCGG 5 cut(s) 281, 410, 510, 530, 695
HphI GGTGA 5 cut(s) 163, 184, 343, 397, 952
Hpy166II GTNNAC 2 cut(s) 654, 672
Hpy188I TCNGA 2 cut(s) 267, 275
Hpy188III TCNNGA 6 cut(s) 110, 134, 543, 732, 794, 986
Hpy8I GTNNAC 2 cut(s) 654, 672
Hpy99I CGWCG 2 cut(s) 478, 481
HpyAV CCTTC 7 cut(s) 220, 247, 382, 719, 833, 880, 958
HpyCH4III ACNGT 4 cut(s) 35, 98, 463, 474
HpyCH4IV ACGT 1 cut(s) 975
HpyCH4V TGCA 5 cut(s) 127, 184, 247, 418, 505
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
HpyF3I CTNAG 5 cut(s) 161, 264, 665, 755, 844
HpySE526I ACGT 1 cut(s) 975
Hsp92II CATG 5 cut(s) 47, 57, 211, 239, 359
HspAI GCGC 3 cut(s) 175, 500, 823
KpnI GGTACC 1 cut(s) 530
KroI GCCGGC 1 cut(s) 280
KroNI GCCGGC 1 cut(s) 282
Kzo9I GATC 1 cut(s) 270
LmnI GCTCC 4 cut(s) 16, 124, 295, 967
Lsp1109I GCAGC 3 cut(s) 489, 565, 620
LweI GCATC 2 cut(s) 63, 565
MaeI CTAG 4 cut(s) 543, 636, 768, 994
MaeII ACGT 1 cut(s) 975
MaeIII GTNAC 3 cut(s) 151, 371, 859
MalI GATC 1 cut(s) 272
MboI GATC 1 cut(s) 270
MboII GAAGA 4 cut(s) 125, 340, 895, 951
MflI RGATCY 1 cut(s) 270
MhlI GDGCHC 3 cut(s) 109, 218, 542
MluCI AATT 3 cut(s) 8, 67, 644
MmeI TCCRAC 1 cut(s) 691
MroNI GCCGGC 1 cut(s) 280
MseI TTAA 1 cut(s) 593
MslI CAYNNNNRTG 2 cut(s) 221, 935
MspI CCGG 5 cut(s) 281, 410, 510, 530, 695
MspR9I CCNGG 4 cut(s) 410, 511, 554, 696
MvaI CCWGG 1 cut(s) 554
MwoI GCNNNNNNNGC 1 cut(s) 181
NaeI GCCGGC 1 cut(s) 282
NciI CCSGG 3 cut(s) 410, 511, 696
NcoI CCATGG 1 cut(s) 53
NdeII GATC 1 cut(s) 270
NgoMIV GCCGGC 1 cut(s) 280
NlaIII CATG 5 cut(s) 47, 57, 211, 239, 359
NlaIV GGNNCC 5 cut(s) 120, 272, 408, 528, 761
NmuCI GTSAC 3 cut(s) 151, 371, 859
NsbI TGCGCA 1 cut(s) 176
NspI RCATGY 1 cut(s) 211
NspV TTCGAA 1 cut(s) 962
OliI CACNNNNGTG 2 cut(s) 221, 935
PciI ACATGT 1 cut(s) 207
PdiI GCCGGC 1 cut(s) 282
PfeI GAWTC 1 cut(s) 520
PflMI CCANNNNNTGG 2 cut(s) 382, 559
PfoI TCCNGGA 1 cut(s) 552
PkrI GCNGC 4 cut(s) 50, 504, 580, 610
PpuMI RGGWCCY 1 cut(s) 406
PscI ACATGT 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 1 cut(s) 552
PspFI CCCAGC 1 cut(s) 195
PspGI CCWGG 1 cut(s) 552
PspN4I GGNNCC 5 cut(s) 120, 272, 408, 528, 761
PspPI GGNCC 7 cut(s) 50, 406, 692, 704, 719, 734, 889
PspPPI RGGWCCY 1 cut(s) 406
PstI CTGCAG 2 cut(s) 420, 507
PsuI RGATCY 1 cut(s) 270
RsaI GTAC 2 cut(s) 460, 528
RsaNI GTAC 2 cut(s) 459, 527
RseI CAYNNNNRTG 2 cut(s) 221, 935
SaqAI TTAA 1 cut(s) 593
SatI GCNGC 4 cut(s) 49, 503, 579, 609
Sau3AI GATC 1 cut(s) 270
Sau96I GGNCC 7 cut(s) 50, 406, 692, 704, 719, 734, 889
ScrFI CCNGG 4 cut(s) 410, 511, 554, 696
SduI GDGCHC 3 cut(s) 109, 218, 542
SfaNI GCATC 2 cut(s) 63, 565
SfcI CTRYAG 2 cut(s) 416, 503
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 3 cut(s) 406, 719, 734
SmiMI CAYNNNNRTG 2 cut(s) 221, 935
SmlI CTYRAG 2 cut(s) 809, 984
SmoI CTYRAG 2 cut(s) 809, 984
Sse9I AATT 3 cut(s) 8, 67, 644
SsiI CCGC 4 cut(s) 48, 149, 307, 581
SspMI CTAG 4 cut(s) 543, 636, 768, 994
StyD4I CCNGG 4 cut(s) 408, 509, 552, 694
StyI CCWWGG 1 cut(s) 53
TaaI ACNGT 4 cut(s) 35, 98, 463, 474
TaiI ACGT 1 cut(s) 978
TaqI TCGA 4 cut(s) 71, 322, 422, 962
TasI AATT 3 cut(s) 8, 67, 644
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 1 cut(s) 520
Tru1I TTAA 1 cut(s) 593
Tru9I TTAA 1 cut(s) 593
TscAI CASTG 3 cut(s) 40, 405, 468
TseFI GTSAC 3 cut(s) 151, 371, 859
TseI GCWGC 3 cut(s) 502, 578, 608
Tsp45I GTSAC 3 cut(s) 151, 371, 859
TspDTI ATGAA 2 cut(s) 32, 327
TspRI CASTG 3 cut(s) 40, 405, 468
Van91I CCANNNNNTGG 2 cut(s) 382, 559
VpaK11BI GGWCC 3 cut(s) 406, 719, 734
XbaI TCTAGA 1 cut(s) 542
XceI RCATGY 1 cut(s) 211
XcmI CCANNNNNNNNNTGG 2 cut(s) 460, 556
XspI CTAG 4 cut(s) 543, 636, 768, 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.