Rorug04G0043600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000123
Physical Location & Seq
Forward (+)
6816181 .. 6817602
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0043600.1

Sequence Viewer

Length: 741 bp
ATGTGTACTCTAGAGAAGCGCGGCGACATCTTCTTCCTAACCCTAACCGGCGCCGGAGCCGGCGACGACGACAACGACGAGCACCGCCTCGGCCTCCCCGTCATCTCCTCCCTCCTCTCCGCCCTCGCCGACGCCAAGTCCCAATCCTCCCCCGGCTCCGTCCTCATCACCACCGCCCGCGGCAAGTTCTTCTCCAACGGCTTCGACCTCGCCTGGGCCCAAACCGCCGGCTCCTCCTCCGCCGCCCGCCACCGCCTCCACCAGATGGTCGTCGCCTTCAAGCCCGTCGTCGCCGCCCTCCTCTCCCTCCCCATGCCCACCGTCGCCGCTCTCCCAGGCCACGCCGCCGCCGCCGGCCTCCTCCTCGCCCTCAGCCACGACTACGTCACCATGCGGCGCGATCGCGGCGTGCTCTACATGAGCGAGGTCGACCTGGGGCTGCCGTTTCCGGACTACTTCGCGGCGGCGTTCCGGGCCAAGATCGGGTCGGTCTCGGCTCGGAGGGACTTGCTGCTGAGGGGGATGAAGGTGAGGGGAGAGGAGGCGGTCAGGATGGGGATCGTGGACTCGGCGCACGATAGCGCCGAGGCGGCGGTGGAGGCGGCGGTGCGCGTGGCGGAGAAGCTCGGGGAGAGGAAGTGGAAGGGTGACGTGTACGCCGAGATTAGGATGAGCTTGTACCCGGAGCTATGTGGCGTGCTGGGATTGGAAGCCAAAGTCGTCGCCACTCCGAAGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

246

Amino Acids

26.19

Weight (kDa)

7.81

Isoelectric Point (pI)

34.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 30 - 199 6.8e-08 Enoyl-CoA hydratase/isomerase
ECH_1 PF00378 35 - 211 3.7e-19 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 265
AccBSI CCGCTC 1 cut(s) 329
AccI GTMKAC 1 cut(s) 429
AccII CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
AccIII TCCGGA 1 cut(s) 448
AclWI GGATC 1 cut(s) 566
AcyI GRCGYC 2 cut(s) 51, 132
AfaI GTAC 3 cut(s) 7, 656, 680
AfiI CCNNNNNNNGG 4 cut(s) 214, 265, 483, 666
AflIII ACRYGT 1 cut(s) 651
AgsI TTSAA 1 cut(s) 280
AhdI GACNNNNNGTC 1 cut(s) 136
AjiI CACGTC 1 cut(s) 652
AjnI CCWGG 3 cut(s) 212, 334, 432
AluBI AGCT 4 cut(s) 625, 675, 688, 736
AluI AGCT 4 cut(s) 625, 675, 688, 736
Alw21I GWGCWC 2 cut(s) 84, 414
Alw26I GTCTC 1 cut(s) 496
AlwI GGATC 1 cut(s) 566
Ama87I CYCGRG 1 cut(s) 626
Aor13HI TCCGGA 1 cut(s) 448
AoxI GGCC 5 cut(s) 91, 216, 337, 355, 474
ApaI GGGCCC 1 cut(s) 220
ApeKI GCWGC 2 cut(s) 439, 511
AsiSI GCGATCGC 1 cut(s) 403
AspLEI GCGC 6 cut(s) 21, 53, 399, 574, 584, 612
AspS9I GGNCC 3 cut(s) 216, 217, 474
AsuC2I CCSGG 3 cut(s) 153, 473, 683
AsuHPI GGTGA 4 cut(s) 160, 379, 541, 659
AvaI CYCGRG 1 cut(s) 626
BaeGI GKGCMC 1 cut(s) 220
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 220
Bbv12I GWGCWC 2 cut(s) 84, 414
BbvCI CCTCAGC 2 cut(s) 371, 515
BbvI GCAGC 2 cut(s) 426, 498
BccI CCATC 2 cut(s) 259, 547
BceAI ACGGC 2 cut(s) 214, 427
BciT130I CCWGG 3 cut(s) 214, 336, 434
BcnI CCSGG 3 cut(s) 153, 473, 683
BcoDI GTCTC 1 cut(s) 496
BfaI CTAG 1 cut(s) 11
BfoI RGCGCY 2 cut(s) 54, 585
BglI GCCNNNNNGGC 1 cut(s) 590
Bme1390I CCNGG 6 cut(s) 153, 214, 336, 434, 473, 683
BmeRI GACNNNNNGTC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 626
BmgBI CACGTC 1 cut(s) 652
BmgT120I GGNCC 3 cut(s) 216, 217, 474
BmiI GGNNCC 5 cut(s) 52, 58, 157, 218, 232
BmrFI CCNGG 6 cut(s) 153, 214, 336, 434, 473, 683
Bpu10I CCTNAGC 2 cut(s) 371, 515
BpuMI CCSGG 3 cut(s) 153, 473, 683
BsaBI GATNNNNATC 1 cut(s) 557
BsaHI GRCGYC 2 cut(s) 51, 132
BsaI GGTCTC 1 cut(s) 496
BsaJI CCNNGG 7 cut(s) 88, 151, 178, 213, 334, 433, 585
BsaWI WCCGGW 1 cut(s) 448
BsaXI ACNNNNNCTCC 2 cut(s) 623, 653
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 265, 483, 666
Bse118I RCCGGY 4 cut(s) 47, 59, 227, 353
Bse8I GATNNNNATC 1 cut(s) 557
BseAI TCCGGA 1 cut(s) 448
BseBI CCWGG 3 cut(s) 214, 336, 434
BseDI CCNNGG 7 cut(s) 88, 151, 178, 213, 334, 433, 585
BseGI GGATG 3 cut(s) 528, 558, 675
BseJI GATNNNNATC 1 cut(s) 557
BseLI CCNNNNNNNGG 4 cut(s) 214, 265, 483, 666
BseMII CTCAG 2 cut(s) 385, 506
BseRI GAGGAG 8 cut(s) 97, 104, 223, 226, 290, 350, 353, 554
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 2 cut(s) 426, 498
BseYI CCCAGC 1 cut(s) 700
Bsh1236I CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
Bsh1285I CGRYCG 1 cut(s) 403
BshFI GGCC 5 cut(s) 93, 218, 339, 357, 476
BshNI GGYRCC 1 cut(s) 50
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 2 cut(s) 84, 414
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 9 cut(s) 48, 54, 60, 153, 228, 354, 449, 472, 683
BslFI GGGAC 2 cut(s) 124, 518
BslI CCNNNNNNNGG 4 cut(s) 214, 265, 483, 666
BsmAI GTCTC 1 cut(s) 496
BsmFI GGGAC 2 cut(s) 124, 518
BsnI GGCC 5 cut(s) 93, 218, 339, 357, 476
Bso31I GGTCTC 1 cut(s) 496
BsoBI CYCGRG 1 cut(s) 626
Bsp120I GGGCCC 1 cut(s) 216
Bsp1286I GDGCHC 3 cut(s) 84, 220, 414
Bsp13I TCCGGA 1 cut(s) 448
Bsp143I GATC 3 cut(s) 400, 480, 558
BspANI GGCC 5 cut(s) 93, 218, 339, 357, 476
BspCNI CTCAG 2 cut(s) 384, 507
BspEI TCCGGA 1 cut(s) 448
BspFNI CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
BspLI GGNNCC 5 cut(s) 52, 58, 157, 218, 232
BspPI GGATC 1 cut(s) 566
BspT107I GGYRCC 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 496
BsrBI CCGCTC 1 cut(s) 329
BsrFI RCCGGY 4 cut(s) 47, 59, 227, 353
BssAI RCCGGY 4 cut(s) 47, 59, 227, 353
BssECI CCNNGG 7 cut(s) 88, 151, 178, 213, 334, 433, 585
BssMI GATC 3 cut(s) 400, 480, 558
BssNI GRCGYC 2 cut(s) 51, 132
Bst2UI CCWGG 3 cut(s) 214, 336, 434
Bst4CI ACNGT 1 cut(s) 322
BstACI GRCGYC 2 cut(s) 51, 132
BstC8I GCNNGC 7 cut(s) 61, 178, 229, 247, 355, 410, 698
BstDEI CTNAG 2 cut(s) 371, 515
BstDSI CCRYGG 1 cut(s) 178
BstF5I GGATG 3 cut(s) 528, 558, 675
BstFNI CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
BstH2I RGCGCY 2 cut(s) 54, 585
BstHHI GCGC 6 cut(s) 21, 53, 399, 574, 584, 612
BstKTI GATC 3 cut(s) 403, 483, 561
BstMAI GTCTC 1 cut(s) 496
BstMBI GATC 3 cut(s) 400, 480, 558
BstMCI CGRYCG 1 cut(s) 403
BstMWI GCNNNNNNNGC 6 cut(s) 224, 350, 405, 473, 590, 599
BstNI CCWGG 3 cut(s) 214, 336, 434
BstSCI CCNGG 6 cut(s) 151, 212, 334, 432, 471, 681
BstSLI GKGCMC 1 cut(s) 220
BstUI CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
BstV1I GCAGC 2 cut(s) 426, 498
BsuRI GGCC 5 cut(s) 93, 218, 339, 357, 476
BtgI CCRYGG 1 cut(s) 178
BtrI CACGTC 1 cut(s) 652
BtsCI GGATG 3 cut(s) 528, 558, 675
Cac8I GCNNGC 7 cut(s) 61, 178, 229, 247, 355, 410, 698
CfoI GCGC 6 cut(s) 21, 53, 399, 574, 584, 612
Cfr10I RCCGGY 4 cut(s) 47, 59, 227, 353
Cfr13I GGNCC 3 cut(s) 216, 217, 474
Cfr42I CCGCGG 1 cut(s) 181
CseI GACGC 1 cut(s) 140
Csp6I GTAC 3 cut(s) 6, 655, 679
CviAII CATG 3 cut(s) 313, 391, 418
CviQI GTAC 3 cut(s) 6, 655, 679
DdeI CTNAG 2 cut(s) 371, 515
DinI GGCGCC 1 cut(s) 52
DpnI GATC 3 cut(s) 402, 482, 560
DpnII GATC 3 cut(s) 400, 480, 558
DriI GACNNNNNGTC 1 cut(s) 136
Eam1105I GACNNNNNGTC 1 cut(s) 136
EciI GGCGGA 3 cut(s) 109, 229, 632
Eco24I GRGCYC 1 cut(s) 220
Eco31I GGTCTC 1 cut(s) 496
Eco88I CYCGRG 1 cut(s) 626
EcoRII CCWGG 3 cut(s) 212, 334, 432
EcoT38I GRGCYC 1 cut(s) 220
EgeI GGCGCC 1 cut(s) 52
EheI GGCGCC 1 cut(s) 52
FaeI CATG 3 cut(s) 316, 394, 421
FaiI YATR 4 cut(s) 314, 392, 419, 691
FaqI GGGAC 2 cut(s) 124, 518
FatI CATG 3 cut(s) 312, 390, 417
FauI CCCGC 2 cut(s) 185, 254
FblI GTMKAC 1 cut(s) 429
FokI GGATG 3 cut(s) 535, 565, 682
FriOI GRGCYC 1 cut(s) 220
FspBI CTAG 1 cut(s) 11
GlaI GCGC 6 cut(s) 20, 52, 398, 573, 583, 611
GsaI CCCAGC 1 cut(s) 704
HaeII RGCGCY 2 cut(s) 54, 585
HaeIII GGCC 5 cut(s) 93, 218, 339, 357, 476
HapII CCGG 9 cut(s) 48, 54, 60, 153, 228, 354, 449, 472, 683
HgaI GACGC 1 cut(s) 140
HhaI GCGC 6 cut(s) 21, 53, 399, 574, 584, 612
Hin1I GRCGYC 2 cut(s) 51, 132
Hin1II CATG 3 cut(s) 316, 394, 421
Hin6I GCGC 6 cut(s) 19, 51, 397, 572, 582, 610
HinP1I GCGC 6 cut(s) 19, 51, 397, 572, 582, 610
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HinfI GANTC 1 cut(s) 566
HpaII CCGG 9 cut(s) 48, 54, 60, 153, 228, 354, 449, 472, 683
HphI GGTGA 4 cut(s) 160, 379, 541, 659
Hpy166II GTNNAC 4 cut(s) 6, 430, 565, 655
Hpy188I TCNGA 3 cut(s) 501, 732, 740
Hpy188III TCNNGA 3 cut(s) 11, 449, 550
Hpy8I GTNNAC 4 cut(s) 6, 430, 565, 655
Hpy99I CGWCG 9 cut(s) 68, 71, 80, 134, 275, 290, 293, 326, 725
HpyAV CCTTC 3 cut(s) 286, 520, 637
HpyCH4III ACNGT 1 cut(s) 322
HpyCH4IV ACGT 2 cut(s) 384, 651
HpyF10VI GCNNNNNNNGC 6 cut(s) 224, 350, 405, 473, 590, 599
HpyF3I CTNAG 2 cut(s) 371, 515
HpySE526I ACGT 2 cut(s) 384, 651
Hsp92I GRCGYC 2 cut(s) 51, 132
Hsp92II CATG 3 cut(s) 316, 394, 421
HspAI GCGC 6 cut(s) 19, 51, 397, 572, 582, 610
KasI GGCGCC 1 cut(s) 50
Kpn2I TCCGGA 1 cut(s) 448
KroI GCCGGC 3 cut(s) 59, 227, 353
KroNI GCCGGC 3 cut(s) 61, 229, 355
KspI CCGCGG 1 cut(s) 181
Kzo9I GATC 3 cut(s) 400, 480, 558
LmnI GCTCC 4 cut(s) 56, 161, 236, 685
Lsp1109I GCAGC 2 cut(s) 426, 498
MaeI CTAG 1 cut(s) 11
MaeII ACGT 2 cut(s) 384, 651
MaeIII GTNAC 2 cut(s) 385, 647
MalI GATC 3 cut(s) 402, 482, 560
MbiI CCGCTC 1 cut(s) 329
MboI GATC 3 cut(s) 400, 480, 558
MboII GAAGA 3 cut(s) 22, 25, 181
MhlI GDGCHC 3 cut(s) 84, 220, 414
Mly113I GGCGCC 1 cut(s) 51
MlyI GAGTC 1 cut(s) 560
MmeI TCCRAC 1 cut(s) 219
MroI TCCGGA 1 cut(s) 448
MroNI GCCGGC 3 cut(s) 59, 227, 353
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 9 cut(s) 48, 54, 60, 153, 228, 354, 449, 472, 683
MspR9I CCNGG 6 cut(s) 153, 214, 336, 434, 473, 683
MvaI CCWGG 3 cut(s) 214, 336, 434
MvnI CGCG 6 cut(s) 21, 180, 399, 405, 461, 612
MwoI GCNNNNNNNGC 6 cut(s) 224, 350, 405, 473, 590, 599
NaeI GCCGGC 3 cut(s) 61, 229, 355
NarI GGCGCC 1 cut(s) 51
NciI CCSGG 3 cut(s) 153, 473, 683
NdeII GATC 3 cut(s) 400, 480, 558
NgoMIV GCCGGC 3 cut(s) 59, 227, 353
NlaIII CATG 3 cut(s) 316, 394, 421
NlaIV GGNNCC 5 cut(s) 52, 58, 157, 218, 232
NmeAIII GCCGAG 5 cut(s) 69, 473, 548, 610, 685
NmuCI GTSAC 2 cut(s) 385, 647
PcsI WCGNNNNNNNCGW 5 cut(s) 72, 75, 96, 582, 657
PdiI GCCGGC 3 cut(s) 61, 229, 355
PflFI GACNNNGTC 1 cut(s) 383
PflMI CCANNNNNTGG 1 cut(s) 265
Ple19I CGATCG 1 cut(s) 403
PleI GAGTC 1 cut(s) 560
PluTI GGCGCC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 560
Psp6I CCWGG 3 cut(s) 212, 334, 432
PspFI CCCAGC 1 cut(s) 700
PspGI CCWGG 3 cut(s) 212, 334, 432
PspN4I GGNNCC 5 cut(s) 52, 58, 157, 218, 232
PspOMI GGGCCC 1 cut(s) 216
PspPI GGNCC 3 cut(s) 216, 217, 474
PsyI GACNNNGTC 1 cut(s) 383
PvuI CGATCG 1 cut(s) 403
RgaI GCGATCGC 1 cut(s) 403
RsaI GTAC 3 cut(s) 7, 656, 680
RsaNI GTAC 3 cut(s) 6, 655, 679
SacII CCGCGG 1 cut(s) 181
SalI GTCGAC 1 cut(s) 428
Sau3AI GATC 3 cut(s) 400, 480, 558
Sau96I GGNCC 3 cut(s) 216, 217, 474
SchI GAGTC 1 cut(s) 560
ScrFI CCNGG 6 cut(s) 153, 214, 336, 434, 473, 683
SduI GDGCHC 3 cut(s) 84, 220, 414
SfaAI GCGATCGC 1 cut(s) 403
SfoI GGCGCC 1 cut(s) 52
Sfr303I CCGCGG 1 cut(s) 181
SgfI GCGATCGC 1 cut(s) 403
SgrBI CCGCGG 1 cut(s) 181
SspDI GGCGCC 1 cut(s) 50
SspMI CTAG 1 cut(s) 11
StyD4I CCNGG 6 cut(s) 151, 212, 334, 432, 471, 681
TaaI ACNGT 1 cut(s) 322
TaiI ACGT 2 cut(s) 387, 654
TaqI TCGA 2 cut(s) 204, 429
TaqII GACCGA 1 cut(s) 478
TatI WGTACW 1 cut(s) 5
TseFI GTSAC 2 cut(s) 385, 647
TseI GCWGC 2 cut(s) 439, 511
Tsp45I GTSAC 2 cut(s) 385, 647
TspDTI ATGAA 1 cut(s) 539
TspGWI ACGGA 1 cut(s) 148
Tth111I GACNNNGTC 1 cut(s) 383
Van91I CCANNNNNTGG 1 cut(s) 265
XbaI TCTAGA 1 cut(s) 10
XmiI GTMKAC 1 cut(s) 429
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.