Prupe.8G183300_v2.0.a1

RING-H2 finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18245124 .. 18245606
483 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G183300.1

Sequence Viewer

Length: 483 bp
ATGATATGCCTAATGGTTTCTCAGTCACATTTGAGTATGGCTACAATTTTCTTCTACACTTGTTTTTGGATCCCATTGCTGCAAATGAAGAGAGCTCTGGCCAGATTGGTTGGTTTTGTGTTCTTCTTCACCTGCCAAGTGGAGCAGGAGGAGGACCAAATGGGCTGCAACCAGATGTGCCTTCCTGTGGCTAGGTTCCAGGACTTGCAGGATCATGGTAGCTTAAGGTGTGGACAGGAAGCTTTGGAGGAGACATGCTCAATTTGCTTGGTTGAGTTTGAGAAGGAGGATGTGGTGAGTCAATTGTCTAAGTGTGGGCATGTTTTCCACATGGACTGCATTGAGAGGTGGATTGAGAGCAGCCACTTCACCTGCCCAATTTGCAGGTCTCTTTTCTTCAGTTTAAAGACTTCTCATGCAAAATGGGATGAGGGTGTTAATAGTTCTTCCTCCTACCTTAATGGGTTTTCTTGGTATTTTTAG

Protein Analysis

161

Amino Acids

18.57

Weight (kDa)

5.26

Isoelectric Point (pI)

57.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 140, 380
Acc36I ACCTGC 3 cut(s) 140, 375, 380
AclWI GGATC 3 cut(s) 64, 77, 219
AcoI YGGCCR 1 cut(s) 99
AcuI CTGAAG 1 cut(s) 382
AfiI CCNNNNNNNGG 1 cut(s) 187
AflII CTTAAG 1 cut(s) 223
AjnI CCWGG 1 cut(s) 198
AluBI AGCT 3 cut(s) 95, 222, 242
AluI AGCT 3 cut(s) 95, 222, 242
Alw21I GWGCWC 1 cut(s) 97
Alw26I GTCTC 2 cut(s) 245, 393
AlwI GGATC 3 cut(s) 64, 77, 219
AoxI GGCC 1 cut(s) 99
ApeKI GCWGC 3 cut(s) 79, 165, 360
AspS9I GGNCC 1 cut(s) 154
AsuHPI GGTGA 3 cut(s) 121, 307, 361
AvaII GGWCC 1 cut(s) 154
BalI TGGCCA 1 cut(s) 101
BamHI GGATCC 1 cut(s) 69
BanII GRGCYC 1 cut(s) 97
Bbv12I GWGCWC 1 cut(s) 97
BbvI GCAGC 3 cut(s) 66, 152, 372
BciT130I CCWGG 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 245, 393
BfaI CTAG 1 cut(s) 192
BfrI CTTAAG 1 cut(s) 223
BfuAI ACCTGC 3 cut(s) 140, 375, 380
BisI GCNGC 3 cut(s) 80, 166, 361
BlsI GCNGC 3 cut(s) 81, 167, 362
Bme1390I CCNGG 1 cut(s) 200
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 2 cut(s) 71, 197
BmrFI CCNGG 1 cut(s) 200
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BsaI GGTCTC 1 cut(s) 393
Bsc4I CCNNNNNNNGG 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 74
BseBI CCWGG 1 cut(s) 200
BseGI GGATG 2 cut(s) 295, 433
BseLI CCNNNNNNNGG 1 cut(s) 187
BseMI GCAATG 1 cut(s) 74
BseMII CTCAG 1 cut(s) 35
BseRI GAGGAG 2 cut(s) 164, 263
BseXI GCAGC 3 cut(s) 66, 152, 372
BshFI GGCC 1 cut(s) 101
BsiHKAI GWGCWC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 187
BsmAI GTCTC 2 cut(s) 245, 393
BsnI GGCC 1 cut(s) 101
Bso31I GGTCTC 1 cut(s) 393
Bsp1286I GDGCHC 1 cut(s) 97
Bsp143I GATC 2 cut(s) 69, 211
BspANI GGCC 1 cut(s) 101
BspCNI CTCAG 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 71, 197
BspMI ACCTGC 3 cut(s) 140, 375, 380
BspPI GGATC 3 cut(s) 64, 77, 219
BspTI CTTAAG 1 cut(s) 223
BspTNI GGTCTC 1 cut(s) 393
BsrDI GCAATG 1 cut(s) 74
BssMI GATC 2 cut(s) 69, 211
Bst2UI CCWGG 1 cut(s) 200
Bst6I CTCTTC 1 cut(s) 83
BstAFI CTTAAG 1 cut(s) 223
BstDEI CTNAG 2 cut(s) 21, 309
BstF5I GGATG 2 cut(s) 295, 433
BstKTI GATC 2 cut(s) 72, 214
BstMAI GTCTC 2 cut(s) 245, 393
BstMBI GATC 2 cut(s) 69, 211
BstMWI GCNNNNNNNGC 2 cut(s) 264, 381
BstNI CCWGG 1 cut(s) 200
BstNSI RCATGY 2 cut(s) 258, 323
BstSCI CCNGG 1 cut(s) 198
BstV1I GCAGC 3 cut(s) 66, 152, 372
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BsuRI GGCC 1 cut(s) 101
BtsCI GGATG 2 cut(s) 295, 433
BveI ACCTGC 3 cut(s) 140, 375, 380
Cfr13I GGNCC 1 cut(s) 154
CviAII CATG 5 cut(s) 215, 255, 320, 331, 416
CviJI RGCY 8 cut(s) 41, 95, 101, 165, 191, 222, 242, 363
CviKI_1 RGCY 8 cut(s) 41, 95, 101, 165, 191, 222, 242, 363
DdeI CTNAG 2 cut(s) 21, 309
DpnI GATC 2 cut(s) 71, 213
DpnII GATC 2 cut(s) 69, 211
DraI TTTAAA 1 cut(s) 405
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 97
Eco31I GGTCTC 1 cut(s) 393
Eco47I GGWCC 1 cut(s) 154
Eco53kI GAGCTC 1 cut(s) 95
Eco57I CTGAAG 1 cut(s) 382
EcoICRI GAGCTC 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 198
EcoT38I GRGCYC 1 cut(s) 97
FaeI CATG 5 cut(s) 218, 258, 323, 334, 419
FaiI YATR 7 cut(s) 7, 38, 216, 256, 321, 332, 417
FatI CATG 5 cut(s) 214, 254, 319, 330, 415
Fnu4HI GCNGC 3 cut(s) 80, 166, 361
FokI GGATG 2 cut(s) 302, 440
FriOI GRGCYC 1 cut(s) 97
Fsp4HI GCNGC 3 cut(s) 80, 166, 361
FspBI CTAG 1 cut(s) 192
GluI GCNGC 3 cut(s) 80, 166, 361
HaeIII GGCC 1 cut(s) 101
Hin1II CATG 5 cut(s) 218, 258, 323, 334, 419
HindIII AAGCTT 1 cut(s) 240
HinfI GANTC 1 cut(s) 298
HphI GGTGA 3 cut(s) 121, 307, 361
Hpy166II GTNNAC 1 cut(s) 233
Hpy8I GTNNAC 1 cut(s) 233
HpyAV CCTTC 2 cut(s) 191, 277
HpyCH4V TGCA 6 cut(s) 82, 168, 208, 339, 384, 419
HpyF10VI GCNNNNNNNGC 2 cut(s) 264, 381
HpyF3I CTNAG 2 cut(s) 21, 309
Hsp92II CATG 5 cut(s) 218, 258, 323, 334, 419
Kzo9I GATC 2 cut(s) 69, 211
LmnI GCTCC 1 cut(s) 142
Lsp1109I GCAGC 3 cut(s) 66, 152, 372
MaeI CTAG 1 cut(s) 192
MaeIII GTNAC 1 cut(s) 24
MalI GATC 2 cut(s) 71, 213
MboI GATC 2 cut(s) 69, 211
MboII GAAGA 6 cut(s) 43, 100, 115, 118, 388, 438
MfeI CAATTG 1 cut(s) 302
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 97
MlsI TGGCCA 1 cut(s) 101
MluCI AATT 4 cut(s) 45, 261, 302, 378
MluNI TGGCCA 1 cut(s) 101
MlyI GAGTC 1 cut(s) 307
MnlI CCTC 7 cut(s) 142, 145, 241, 280, 339, 424, 460
Mox20I TGGCCA 1 cut(s) 101
MscI TGGCCA 1 cut(s) 101
MseI TTAA 4 cut(s) 224, 404, 438, 459
Msp20I TGGCCA 1 cut(s) 101
MspCI CTTAAG 1 cut(s) 223
MspR9I CCNGG 1 cut(s) 200
MunI CAATTG 1 cut(s) 302
MvaI CCWGG 1 cut(s) 200
MwoI GCNNNNNNNGC 2 cut(s) 264, 381
NdeII GATC 2 cut(s) 69, 211
NlaIII CATG 5 cut(s) 218, 258, 323, 334, 419
NlaIV GGNNCC 2 cut(s) 71, 197
NmuCI GTSAC 1 cut(s) 24
NspI RCATGY 2 cut(s) 258, 323
PaqCI CACCTGC 2 cut(s) 140, 380
PfoI TCCNGGA 1 cut(s) 198
PkrI GCNGC 3 cut(s) 81, 167, 362
PleI GAGTC 1 cut(s) 306
PpsI GAGTC 1 cut(s) 306
Psp124BI GAGCTC 1 cut(s) 97
Psp6I CCWGG 1 cut(s) 198
PspGI CCWGG 1 cut(s) 198
PspN4I GGNNCC 2 cut(s) 71, 197
PspPI GGNCC 1 cut(s) 154
PsuI RGATCY 1 cut(s) 69
SacI GAGCTC 1 cut(s) 97
SaqAI TTAA 4 cut(s) 224, 404, 438, 459
SatI GCNGC 3 cut(s) 80, 166, 361
Sau3AI GATC 2 cut(s) 69, 211
Sau96I GGNCC 1 cut(s) 154
SchI GAGTC 1 cut(s) 307
ScrFI CCNGG 1 cut(s) 200
SduI GDGCHC 1 cut(s) 97
SinI GGWCC 1 cut(s) 154
SmlI CTYRAG 1 cut(s) 223
SmoI CTYRAG 1 cut(s) 223
Sse9I AATT 4 cut(s) 45, 261, 302, 378
SspMI CTAG 1 cut(s) 192
SstI GAGCTC 1 cut(s) 97
StyD4I CCNGG 1 cut(s) 198
TasI AATT 4 cut(s) 45, 261, 302, 378
Tru1I TTAA 4 cut(s) 224, 404, 438, 459
Tru9I TTAA 4 cut(s) 224, 404, 438, 459
TseFI GTSAC 1 cut(s) 24
TseI GCWGC 3 cut(s) 79, 165, 360
Tsp45I GTSAC 1 cut(s) 24
TspDTI ATGAA 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 223
VpaK11BI GGWCC 1 cut(s) 154
XceI RCATGY 2 cut(s) 258, 323
XspI CTAG 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.