Rmu_sc0005038.1_g000028

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005038.1
OG0000123
Physical Location & Seq
Reverse (-)
120750 .. 121936
1187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005038.1_g000028.1.cds

Sequence Viewer

Length: 1092 bp
atggcggcggaagatgggacagggactcttgccttgtcgaatgtggccgtagtgagcctggttgggggcggagacttaatccacgaccctttcttttacctctgtggtcgtttgcttaacaagaaaccagtgatcattcagtcgttttcgacggcgatctccgggatatggtggttgaaggagaaggttctgatccgtgaggaggacggggggatcttcgtgttccaattcaaggaacaagaggtgaaacatcgggttctgcacggcggcccttggtactacagtaactcgatgctgttgttggcggactacaacagggttagcgctctgctggagattcctctgcactgtttggaggtttgggtggcggtgaagggtctgagagttgccatgcgcaatgatcgggctttaacccggattggcaatgttttgggaacttttgttagggctgaccaacttgcgttgcggaggaatgaggctgtccaacgaatccggctgatccatgacgttcgccggcggtttctttactcatgccggaaaagactgcgacaaaggcttgctgctgggggggccgagatcgatgtagagccgtcgccggatgttgctactacgccatcgacggtacctgcgttgaaggatgtcgtggtttctgggtctatggtaccggaggttggaggtggactggttgcaggcatggttgtgcaggcggaggcggaactgggtccgaggttttcggcgggaaatcctgattatgaattagggttgactgttgagtctgggttgaccaaggaaagggccagtgggccgtctgttgggctatttgggtctgagggttgtggtctgttttcatttggacacccatctaaagtgttgggtgtgcgacggcttcgtgaggaggattgggtcgaggacggaaaaggcatgaagcttgctgatggcttagttgaggttcctgttactgatgggaagattccgaagaagaagggtaggccccgtggtcatcggaacaaacctaagcatgctcctgcttcggctgtagtgggctcagttgaggaggtaatggagaagaccaccccaccccaagagggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

363

Amino Acids

39.52

Weight (kDa)

9.08

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 772
Acc16I TGCGCA 1 cut(s) 395
Acc36I ACCTGC 1 cut(s) 634
Acc65I GGTACC 2 cut(s) 622, 661
AccB1I GGYRCC 2 cut(s) 622, 661
AclWI GGATC 3 cut(s) 187, 221, 493
AcoI YGGCCR 1 cut(s) 45
AfaI GTAC 3 cut(s) 278, 624, 663
AfeI AGCGCT 1 cut(s) 325
AfiI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 671, 792, 812, 1085
AgsI TTSAA 3 cut(s) 178, 232, 634
AjnI CCWGG 1 cut(s) 57
AluBI AGCT 1 cut(s) 928
AluI AGCT 1 cut(s) 928
Alw26I GTCTC 1 cut(s) 66
AlwI GGATC 3 cut(s) 187, 221, 493
Aor51HI AGCGCT 1 cut(s) 325
AoxI GGCC 6 cut(s) 45, 268, 570, 795, 803, 989
ApeKI GCWGC 1 cut(s) 560
Asp718I GGTACC 2 cut(s) 622, 661
AspLEI GCGC 2 cut(s) 326, 396
AspS9I GGNCC 6 cut(s) 269, 570, 722, 795, 803, 990
AsuC2I CCSGG 2 cut(s) 163, 415
AsuHPI GGTGA 2 cut(s) 256, 382
AvaII GGWCC 1 cut(s) 722
BaeI ACNNNNGTAYC 4 cut(s) 268, 301, 614, 647
BanI GGYRCC 2 cut(s) 622, 661
BanII GRGCYC 1 cut(s) 1046
BbsI GAAGAC 1 cut(s) 1073
BbvI GCAGC 1 cut(s) 547
BccI CCATC 5 cut(s) 8, 622, 868, 929, 956
BceAI ACGGC 6 cut(s) 32, 168, 280, 574, 790, 899
BciT130I CCWGG 1 cut(s) 59
BclI TGATCA 1 cut(s) 132
BcnI CCSGG 2 cut(s) 163, 415
BcoDI GTCTC 1 cut(s) 66
BfaI CTAG 1 cut(s) 1090
BfmI CTRYAG 2 cut(s) 280, 1035
BfoI RGCGCY 1 cut(s) 327
BfuAI ACCTGC 1 cut(s) 634
BisI GCNGC 3 cut(s) 6, 268, 561
BlsI GCNGC 3 cut(s) 7, 269, 562
Bme1390I CCNGG 3 cut(s) 59, 163, 415
Bme18I GGWCC 1 cut(s) 722
BmgT120I GGNCC 6 cut(s) 269, 570, 722, 795, 803, 990
BmiI GGNNCC 6 cut(s) 571, 624, 663, 723, 951, 992
BmrFI CCNGG 3 cut(s) 59, 163, 415
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 1 cut(s) 282
BmuI ACTGGG 1 cut(s) 728
BpiI GAAGAC 1 cut(s) 1073
BpmI CTGGAG 1 cut(s) 353
Bpu10I CCTNAGC 1 cut(s) 1014
BpuMI CCSGG 2 cut(s) 163, 415
Bsa29I ATCGAT 1 cut(s) 579
BsaJI CCNNGG 4 cut(s) 272, 725, 786, 994
BsaWI WCCGGW 1 cut(s) 664
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 671, 792, 812, 1085
Bse118I RCCGGY 1 cut(s) 513
Bse1I ACTGG 4 cut(s) 128, 687, 723, 798
Bse3DI GCAATG 2 cut(s) 403, 430
BseBI CCWGG 1 cut(s) 59
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 4 cut(s) 272, 725, 786, 994
BseGI GGATG 2 cut(s) 604, 643
BseLI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 671, 792, 812, 1085
BseMI GCAATG 2 cut(s) 403, 430
BseMII CTCAG 3 cut(s) 371, 819, 1059
BseNI ACTGG 4 cut(s) 128, 687, 723, 798
BseRI GAGGAG 3 cut(s) 215, 908, 1067
BseXI GCAGC 1 cut(s) 547
BseYI CCCAGC 1 cut(s) 563
BsgI GTGCAG 3 cut(s) 245, 329, 722
BshFI GGCC 6 cut(s) 47, 270, 572, 797, 805, 991
BshNI GGYRCC 2 cut(s) 622, 661
BshVI ATCGAT 1 cut(s) 579
BsiSI CCGG 7 cut(s) 162, 415, 493, 514, 535, 596, 665
BslFI GGGAC 2 cut(s) 31, 37
BslI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 671, 792, 812, 1085
BsmAI GTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 31, 37
BsnI GGCC 6 cut(s) 47, 270, 572, 797, 805, 991
Bsp1286I GDGCHC 1 cut(s) 1046
Bsp143I GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
BspANI GGCC 6 cut(s) 47, 270, 572, 797, 805, 991
BspCNI CTCAG 3 cut(s) 372, 820, 1058
BspDI ATCGAT 1 cut(s) 579
BspLI GGNNCC 6 cut(s) 571, 624, 663, 723, 951, 992
BspMI ACCTGC 1 cut(s) 634
BspPI GGATC 3 cut(s) 187, 221, 493
BspT107I GGYRCC 2 cut(s) 622, 661
BsrDI GCAATG 2 cut(s) 403, 430
BsrFI RCCGGY 1 cut(s) 513
BsrI ACTGG 4 cut(s) 128, 687, 723, 798
BssAI RCCGGY 1 cut(s) 513
BssECI CCNNGG 4 cut(s) 272, 725, 786, 994
BssMI GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
BssT1I CCWWGG 2 cut(s) 272, 786
Bst2UI CCWGG 1 cut(s) 59
Bst4CI ACNGT 4 cut(s) 284, 350, 622, 769
BstC8I GCNNGC 6 cut(s) 515, 558, 691, 705, 930, 1020
BstDEI CTNAG 5 cut(s) 380, 828, 940, 1014, 1045
BstDSI CCRYGG 1 cut(s) 994
BstF5I GGATG 2 cut(s) 604, 643
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 2 cut(s) 326, 396
BstKTI GATC 7 cut(s) 135, 159, 195, 216, 403, 501, 579
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
BstMWI GCNNNNNNNGC 2 cut(s) 553, 569
BstNI CCWGG 1 cut(s) 59
BstNSI RCATGY 1 cut(s) 1022
BstSCI CCNGG 3 cut(s) 57, 161, 413
BstSFI CTRYAG 2 cut(s) 280, 1035
BstV1I GCAGC 1 cut(s) 547
BstV2I GAAGAC 1 cut(s) 1073
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 6 cut(s) 47, 270, 572, 797, 805, 991
BsuTUI ATCGAT 1 cut(s) 579
BtgI CCRYGG 1 cut(s) 994
BtsCI GGATG 2 cut(s) 604, 643
BtsIMutI CAGTG 3 cut(s) 135, 346, 805
BveI ACCTGC 1 cut(s) 634
Cac8I GCNNGC 6 cut(s) 515, 558, 691, 705, 930, 1020
CfoI GCGC 2 cut(s) 326, 396
Cfr10I RCCGGY 1 cut(s) 513
Cfr13I GGNCC 6 cut(s) 269, 570, 722, 795, 803, 990
ClaI ATCGAT 1 cut(s) 579
Csp6I GTAC 3 cut(s) 277, 623, 662
CviAII CATG 6 cut(s) 391, 503, 531, 694, 922, 1019
CviQI GTAC 3 cut(s) 277, 623, 662
DdeI CTNAG 5 cut(s) 380, 828, 940, 1014, 1045
DpnI GATC 7 cut(s) 134, 158, 194, 215, 402, 500, 578
DpnII GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
DrdI GACNNNNNNGTC 1 cut(s) 772
DseDI GACNNNNNNGTC 1 cut(s) 772
EaeI YGGCCR 1 cut(s) 45
EciI GGCGGA 5 cut(s) 23, 84, 320, 722, 728
Eco130I CCWWGG 2 cut(s) 272, 786
Eco24I GRGCYC 1 cut(s) 1046
Eco47I GGWCC 1 cut(s) 722
Eco47III AGCGCT 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 990
EcoRII CCWGG 1 cut(s) 57
EcoT14I CCWWGG 2 cut(s) 272, 786
EcoT38I GRGCYC 1 cut(s) 1046
ErhI CCWWGG 2 cut(s) 272, 786
FaeI CATG 6 cut(s) 394, 506, 534, 697, 925, 1022
FaiI YATR 9 cut(s) 169, 392, 504, 532, 659, 695, 753, 923, 1020
FaqI GGGAC 2 cut(s) 31, 37
FatI CATG 6 cut(s) 390, 502, 530, 693, 921, 1018
FauI CCCGC 1 cut(s) 730
FbaI TGATCA 1 cut(s) 132
Fnu4HI GCNGC 3 cut(s) 6, 268, 561
FokI GGATG 2 cut(s) 611, 650
FriOI GRGCYC 1 cut(s) 1046
Fsp4HI GCNGC 3 cut(s) 6, 268, 561
FspBI CTAG 1 cut(s) 1090
FspI TGCGCA 1 cut(s) 395
GlaI GCGC 2 cut(s) 325, 395
GluI GCNGC 3 cut(s) 6, 268, 561
GsaI CCCAGC 1 cut(s) 567
GsuI CTGGAG 1 cut(s) 353
HaeII RGCGCY 1 cut(s) 327
HaeIII GGCC 6 cut(s) 47, 270, 572, 797, 805, 991
HapII CCGG 7 cut(s) 162, 415, 493, 514, 535, 596, 665
HhaI GCGC 2 cut(s) 326, 396
Hin1II CATG 6 cut(s) 394, 506, 534, 697, 925, 1022
Hin6I GCGC 2 cut(s) 324, 394
HinP1I GCGC 2 cut(s) 324, 394
HincII GTYRAC 2 cut(s) 765, 783
HindII GTYRAC 2 cut(s) 765, 783
HindIII AAGCTT 1 cut(s) 926
HinfI GANTC 5 cut(s) 25, 337, 489, 773, 970
HpaII CCGG 7 cut(s) 162, 415, 493, 514, 535, 596, 665
HphI GGTGA 2 cut(s) 256, 382
Hpy166II GTNNAC 3 cut(s) 680, 765, 783
Hpy188I TCNGA 6 cut(s) 192, 381, 726, 829, 975, 1005
Hpy188III TCNNGA 2 cut(s) 746, 890
Hpy8I GTNNAC 3 cut(s) 680, 765, 783
Hpy99I CGWCG 4 cut(s) 154, 595, 622, 885
HpyAV CCTTC 5 cut(s) 172, 178, 367, 628, 976
HpyCH4III ACNGT 4 cut(s) 284, 350, 622, 769
HpyCH4IV ACGT 1 cut(s) 507
HpyCH4V TGCA 4 cut(s) 262, 346, 689, 703
HpyF10VI GCNNNNNNNGC 2 cut(s) 553, 569
HpyF3I CTNAG 5 cut(s) 380, 828, 940, 1014, 1045
HpySE526I ACGT 1 cut(s) 507
Hsp92II CATG 6 cut(s) 394, 506, 534, 697, 925, 1022
HspAI GCGC 2 cut(s) 324, 394
KpnI GGTACC 2 cut(s) 626, 665
KroI GCCGGC 1 cut(s) 513
KroNI GCCGGC 1 cut(s) 515
Ksp22I TGATCA 1 cut(s) 132
Kzo9I GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
LmnI GCTCC 1 cut(s) 1027
Lsp1109I GCAGC 1 cut(s) 547
LweI GCATC 1 cut(s) 282
MaeI CTAG 1 cut(s) 1090
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 2 cut(s) 284, 955
MalI GATC 7 cut(s) 134, 158, 194, 215, 402, 500, 578
MboI GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
MboII GAAGA 6 cut(s) 23, 208, 979, 988, 991, 1078
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 1 cut(s) 1046
MluCI AATT 2 cut(s) 227, 755
MlyI GAGTC 2 cut(s) 19, 782
MmeI TCCRAC 2 cut(s) 508, 652
MreI CGCCGGCG 1 cut(s) 513
MroNI GCCGGC 1 cut(s) 513
MseI TTAA 3 cut(s) 77, 117, 410
MslI CAYNNNNRTG 1 cut(s) 698
MspI CCGG 7 cut(s) 162, 415, 493, 514, 535, 596, 665
MspR9I CCNGG 3 cut(s) 59, 163, 415
MvaI CCWGG 1 cut(s) 59
MwoI GCNNNNNNNGC 2 cut(s) 553, 569
NaeI GCCGGC 1 cut(s) 515
NciI CCSGG 2 cut(s) 163, 415
NdeII GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
NgoMIV GCCGGC 1 cut(s) 513
NlaIII CATG 6 cut(s) 394, 506, 534, 697, 925, 1022
NlaIV GGNNCC 6 cut(s) 571, 624, 663, 723, 951, 992
NmeAIII GCCGAG 1 cut(s) 598
NsbI TGCGCA 1 cut(s) 395
NspI RCATGY 1 cut(s) 1022
PaeI GCATGC 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 626
PdiI GCCGGC 1 cut(s) 515
PfeI GAWTC 3 cut(s) 337, 489, 970
PfoI TCCNGGA 1 cut(s) 161
PkrI GCNGC 3 cut(s) 7, 269, 562
PleI GAGTC 2 cut(s) 19, 781
PpsI GAGTC 2 cut(s) 19, 781
Psp6I CCWGG 1 cut(s) 57
PspFI CCCAGC 1 cut(s) 563
PspGI CCWGG 1 cut(s) 57
PspN4I GGNNCC 6 cut(s) 571, 624, 663, 723, 951, 992
PspPI GGNCC 6 cut(s) 269, 570, 722, 795, 803, 990
PsuI RGATCY 1 cut(s) 213
RsaI GTAC 3 cut(s) 278, 624, 663
RsaNI GTAC 3 cut(s) 277, 623, 662
RseI CAYNNNNRTG 1 cut(s) 698
SaqAI TTAA 3 cut(s) 77, 117, 410
SatI GCNGC 3 cut(s) 6, 268, 561
Sau3AI GATC 7 cut(s) 132, 156, 192, 213, 400, 498, 576
Sau96I GGNCC 6 cut(s) 269, 570, 722, 795, 803, 990
SchI GAGTC 2 cut(s) 19, 782
ScrFI CCNGG 3 cut(s) 59, 163, 415
SduI GDGCHC 1 cut(s) 1046
SfaNI GCATC 1 cut(s) 282
SfcI CTRYAG 2 cut(s) 280, 1035
SgrAI CRCCGGYG 1 cut(s) 513
SinI GGWCC 1 cut(s) 722
SmiMI CAYNNNNRTG 1 cut(s) 698
SphI GCATGC 1 cut(s) 1022
Sse9I AATT 2 cut(s) 227, 755
SspMI CTAG 1 cut(s) 1090
StyD4I CCNGG 3 cut(s) 57, 161, 413
StyI CCWWGG 2 cut(s) 272, 786
TaaI ACNGT 4 cut(s) 284, 350, 622, 769
TaiI ACGT 1 cut(s) 510
TaqI TCGA 6 cut(s) 38, 149, 290, 579, 617, 906
TasI AATT 2 cut(s) 227, 755
TauI GCSGC 2 cut(s) 8, 270
TfiI GAWTC 3 cut(s) 337, 489, 970
Tru1I TTAA 3 cut(s) 77, 117, 410
Tru9I TTAA 3 cut(s) 77, 117, 410
TscAI CASTG 3 cut(s) 135, 353, 805
TseI GCWGC 1 cut(s) 560
TspDTI ATGAA 3 cut(s) 768, 837, 938
TspGWI ACGGA 2 cut(s) 185, 927
TspRI CASTG 3 cut(s) 135, 353, 805
VpaK11BI GGWCC 1 cut(s) 722
XceI RCATGY 1 cut(s) 1022
XspI CTAG 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.