Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000126.1

Orthogroup ID

OG0000123

Physical Location & Seq

Genomic Coordinates Reverse (-)

366980 .. 369956

Gene Structure 2977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000126.1_g000076.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

atgatatgtctaatggtttctcagtctggtttaactatggccaccattttcttctacacctgcttttggatcccatttatgcagttcaaaaaagctctagctggaataattagtgatgttctgtttctcactaatatctacaagcccgaggatcataatacttgctgcaatgtaaaccagctgagtcttcctgtggctaggttccaggatttgcaggctcattgtagtaccgataagagtggacaaactgccgaaacctgctcagtgtgcttagtggagtttgaggatgaagatgtgcttctatcgaagaaggtggtggtgatcccgtcgttctcggcggcgatctccaatgtttggggtttgaaggagacagtgttgatccgacaggaggaagatgatgtcttcgtcttccagttcaaggaacgggaggtgaagaatcggattcttgctggggggccatggttctataataattcaatgctgctgttagccgaatacgacgacatctctgctcttgaggtggcgccgctacacctccttgaggtttgggtggcggtgaaaggtctacgcattgctatgcgcaatgagaaggctttaaccttaatcagcaaagtactgggagaattcgttcgggttgatcaaggggcggtgcagcggaaggatctggttcagcagattcgggtggtgcaggacatccggcggaggatccgggggcgacagatcttcaaattttcgtcgacggtctcggtgttggtggagctacaatatgagaaatgtcatggcctccgttcggcatgtggcttatttggtcatggaggtggactttgtgatcggaaattggaggtggagatgctgccattagcggtgtcgagcccggagggagtgcagacgaatccggaagtgctgggttcggcgtcgtggtcaccggtctctgtgccggcggtcgtagggtcagtgatgtcctctgggctgtcggaggggaggccggaagtggttggatcaaatggggtattagttggaacgaagtcgggggctgctgtagaaggtgcagcgatgactccagaagaatcggagggaaacccagtagggttgaccgctgattcgactgggcatgggccgggtttagctgatgggactgatgggctgggtgctgctgggttgttttttactgggtcgggttctgttgggctagatgctgggtttttgtctcacaccaaagtgggtgtacgtaagaagccttttaagactagtttggcgatcattcctctggaatttcagcttggtgagttggtggaggttccgatttctgtggggccagctccaaagaagaagggtcgtcctcctgggcgtcgagctaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031224 GO:0031225 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044425 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

453

Amino Acids

48.85

Weight (kDa)

6.42

Isoelectric Point (pI)

35.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38140
fragaria_vesca	FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica	MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica	Prupe.8G183300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata	RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora	Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii	Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa	Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha	Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana	Rw4G024160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	68
Acc16I	TGCGCA	1 cut(s)	581
Acc36I	ACCTGC	2 cut(s)	68, 266
AccB1I	GGYRCC	1 cut(s)	523
AccB7I	CCANNNNNTGG	1 cut(s)	354
AccI	GTMKAC	2 cut(s)	565, 737
AccIII	TCCGGA	1 cut(s)	895
AciI	CCGC	9 cut(s)	338, 527, 554, 647, 655, 700, 863, 941, 1095
AclWI	GGATC	9 cut(s)	64, 77, 159, 316, 373, 669, 700, 713, 1006
AcoI	YGGCCR	1 cut(s)	39
AcsI	RAATTY	3 cut(s)	623, 728, 1271
AcyI	GRCGYC	3 cut(s)	524, 914, 1348
AfaI	GTAC	3 cut(s)	229, 615, 1227
AfiI	CCNNNNNNNGG	6 cut(s)	66, 354, 388, 418, 541, 790
AgeI	ACCGGT	1 cut(s)	925
AgsI	TTSAA	5 cut(s)	88, 364, 418, 477, 727
AhlI	ACTAGT	1 cut(s)	1247
AjnI	CCWGG	2 cut(s)	204, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	1263, 1295
AleI	CACNNNNGTG	1 cut(s)	1217
AloI	GAACNNNNNNTCC	2 cut(s)	612, 644
AluBI	AGCT	8 cut(s)	95, 101, 181, 760, 1127, 1279, 1319, 1355
AluI	AGCT	8 cut(s)	95, 101, 181, 760, 1127, 1279, 1319, 1355
Alw26I	GTCTC	4 cut(s)	362, 748, 934, 1212
AlwI	GGATC	9 cut(s)	64, 77, 159, 316, 373, 669, 700, 713, 1006
Ama87I	CYCGRG	1 cut(s)	146
Aor13HI	TCCGGA	1 cut(s)	895
AoxI	GGCC	6 cut(s)	39, 455, 781, 983, 1115, 1313
ApeKI	GCWGC	7 cut(s)	165, 481, 652, 853, 1034, 1049, 1151
ApoI	RAATTY	3 cut(s)	623, 728, 1271
ArsI	GACNNNNNNTTYG	2 cut(s)	1084, 1116
AsiGI	ACCGGT	1 cut(s)	925
Asp700I	GAANNNNTTC	1 cut(s)	627
AspLEI	GCGC	2 cut(s)	526, 582
AspS9I	GGNCC	3 cut(s)	455, 1115, 1313
AsuC2I	CCSGG	3 cut(s)	710, 875, 1119
AsuHPI	GGTGA	5 cut(s)	331, 442, 568, 915, 1295
AvaI	CYCGRG	1 cut(s)	146
BalI	TGGCCA	1 cut(s)	41
BamHI	GGATCC	2 cut(s)	69, 705
BanI	GGYRCC	1 cut(s)	523
BanII	GRGCYC	1 cut(s)	875
BbsI	GAAGAC	3 cut(s)	179, 394, 400
BbvI	GCAGC	7 cut(s)	152, 468, 664, 840, 1021, 1061, 1138
BccI	CCATC	2 cut(s)	1124, 1133
BcgI	CGANNNNNNTGC	2 cut(s)	491, 525
BciT130I	CCWGG	2 cut(s)	206, 1344
BclI	TGATCA	1 cut(s)	637
BcnI	CCSGG	3 cut(s)	710, 875, 1119
BcoDI	GTCTC	4 cut(s)	362, 748, 934, 1212
BcuI	ACTAGT	1 cut(s)	1247
BfaI	CTAG	4 cut(s)	98, 198, 1190, 1248
BfmI	CTRYAG	1 cut(s)	1038
BfoI	RGCGCY	1 cut(s)	527
BfuAI	ACCTGC	2 cut(s)	68, 266
BglII	AGATCT	1 cut(s)	720
BisI	GCNGC	9 cut(s)	166, 339, 482, 527, 653, 854, 1035, 1050, 1152
BlsI	GCNGC	9 cut(s)	167, 340, 483, 528, 654, 855, 1036, 1051, 1153
BmcAI	AGTACT	1 cut(s)	615
Bme1390I	CCNGG	5 cut(s)	206, 710, 875, 1119, 1344
BmeT110I	CYCGRG	1 cut(s)	146
BmgT120I	GGNCC	3 cut(s)	455, 1115, 1313
BmiI	GGNNCC	7 cut(s)	71, 203, 456, 525, 707, 1299, 1314
BmrFI	CCNGG	5 cut(s)	206, 710, 875, 1119, 1344
BmrI	ACTGGG	4 cut(s)	626, 1076, 1116, 1179
BmsI	GCATC	2 cut(s)	840, 1183
BmuI	ACTGGG	4 cut(s)	626, 1076, 1116, 1179
BpiI	GAAGAC	3 cut(s)	179, 394, 400
BpmI	CTGGAG	1 cut(s)	1044
BpuEI	CTTGAG	2 cut(s)	536, 560
BpuMI	CCSGG	3 cut(s)	710, 875, 1119
BsaAI	YACGTR	1 cut(s)	1229
BsaHI	GRCGYC	3 cut(s)	524, 914, 1348
BsaI	GGTCTC	2 cut(s)	748, 934
BsaJI	CCNNGG	4 cut(s)	147, 458, 709, 1343
BsaWI	WCCGGW	2 cut(s)	895, 925
BsaXI	ACNNNNNCTCC	4 cut(s)	359, 389, 612, 642
Bsc4I	CCNNNNNNNGG	6 cut(s)	66, 354, 388, 418, 541, 790
Bse118I	RCCGGY	2 cut(s)	925, 937
Bse1I	ACTGG	5 cut(s)	412, 621, 1082, 1111, 1174
Bse3DI	GCAATG	3 cut(s)	175, 570, 589
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	2 cut(s)	206, 1344
BseDI	CCNNGG	4 cut(s)	147, 458, 709, 1343
BseGI	GGATG	2 cut(s)	292, 693
BseLI	CCNNNNNNNGG	6 cut(s)	66, 354, 388, 418, 541, 790
BseMI	GCAATG	3 cut(s)	175, 570, 589
BseMII	CTCAG	3 cut(s)	35, 173, 276
BseNI	ACTGG	5 cut(s)	412, 621, 1082, 1111, 1174
BseXI	GCAGC	7 cut(s)	152, 468, 664, 840, 1021, 1061, 1138
BseYI	CCCAGC	5 cut(s)	449, 904, 1144, 1154, 1196
BsgI	GTGCAG	4 cut(s)	671, 707, 905, 1068
Bsh1285I	CGRYCG	1 cut(s)	945
BshFI	GGCC	6 cut(s)	41, 457, 783, 985, 1117, 1315
BshNI	GGYRCC	1 cut(s)	523
BshTI	ACCGGT	1 cut(s)	925
BsiEI	CGRYCG	1 cut(s)	945
BsiHKCI	CYCGRG	1 cut(s)	146
BsiSI	CCGG	8 cut(s)	697, 709, 875, 896, 926, 938, 986, 1118
BslFI	GGGAC	1 cut(s)	1147
BslI	CCNNNNNNNGG	6 cut(s)	66, 354, 388, 418, 541, 790
BsmAI	GTCTC	4 cut(s)	362, 748, 934, 1212
BsmFI	GGGAC	1 cut(s)	1147
BsnI	GGCC	6 cut(s)	41, 457, 783, 985, 1117, 1315
Bso31I	GGTCTC	2 cut(s)	748, 934
BsoBI	CYCGRG	1 cut(s)	146
Bsp1286I	GDGCHC	1 cut(s)	875
Bsp13I	TCCGGA	1 cut(s)	895
Bsp19I	CCATGG	1 cut(s)	458
BspACI	CCGC	9 cut(s)	338, 527, 554, 647, 655, 700, 863, 941, 1095
BspANI	GGCC	6 cut(s)	41, 457, 783, 985, 1117, 1315
BspCNI	CTCAG	3 cut(s)	34, 174, 275
BspEI	TCCGGA	1 cut(s)	895
BspLI	GGNNCC	7 cut(s)	71, 203, 456, 525, 707, 1299, 1314
BspMI	ACCTGC	2 cut(s)	68, 266
BspPI	GGATC	9 cut(s)	64, 77, 159, 316, 373, 669, 700, 713, 1006
BspT107I	GGYRCC	1 cut(s)	523
BspTNI	GGTCTC	2 cut(s)	748, 934
BsrDI	GCAATG	3 cut(s)	175, 570, 589
BsrFI	RCCGGY	2 cut(s)	925, 937
BsrI	ACTGG	5 cut(s)	412, 621, 1082, 1111, 1174
BssAI	RCCGGY	2 cut(s)	925, 937
BssECI	CCNNGG	4 cut(s)	147, 458, 709, 1343
BssNI	GRCGYC	3 cut(s)	524, 914, 1348
BssT1I	CCWWGG	1 cut(s)	458
Bst2UI	CCWGG	2 cut(s)	206, 1344
Bst4CI	ACNGT	2 cut(s)	373, 742
BstACI	GRCGYC	3 cut(s)	524, 914, 1348
BstBAI	YACGTR	1 cut(s)	1229
BstC8I	GCNNGC	3 cut(s)	216, 939, 1317
BstDEI	CTNAG	5 cut(s)	21, 182, 262, 271, 1356
BstDSI	CCRYGG	1 cut(s)	458
BstEII	GGTNACC	1 cut(s)	921
BstENI	CCTNNNNNAGG	1 cut(s)	539
BstF5I	GGATG	2 cut(s)	292, 693
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	2 cut(s)	526, 582
BstMAI	GTCTC	4 cut(s)	362, 748, 934, 1212
BstMCI	CGRYCG	1 cut(s)	945
BstMWI	GCNNNNNNNGC	1 cut(s)	267
BstNI	CCWGG	2 cut(s)	206, 1344
BstNSI	RCATGY	1 cut(s)	798
BstPI	GGTNACC	1 cut(s)	921
BstSCI	CCNGG	5 cut(s)	204, 708, 873, 1117, 1342
BstSFI	CTRYAG	1 cut(s)	1038
BstSNI	TACGTA	1 cut(s)	1229
BstV1I	GCAGC	7 cut(s)	152, 468, 664, 840, 1021, 1061, 1138
BstV2I	GAAGAC	3 cut(s)	179, 394, 400
BstX2I	RGATCY	4 cut(s)	69, 661, 705, 720
BstYI	RGATCY	4 cut(s)	69, 661, 705, 720
BsuRI	GGCC	6 cut(s)	41, 457, 783, 985, 1117, 1315
BtgI	CCRYGG	1 cut(s)	458
BtgZI	GCGATG	1 cut(s)	1067
BtsCI	GGATG	2 cut(s)	292, 693
BtsIMutI	CAGTG	3 cut(s)	270, 378, 960
BveI	ACCTGC	2 cut(s)	68, 266
Cac8I	GCNNGC	3 cut(s)	216, 939, 1317
CfoI	GCGC	2 cut(s)	526, 582
Cfr10I	RCCGGY	2 cut(s)	925, 937
Cfr13I	GGNCC	3 cut(s)	455, 1115, 1313
CseI	GACGC	2 cut(s)	903, 1337
Csp6I	GTAC	3 cut(s)	228, 614, 1226
CspAI	ACCGGT	1 cut(s)	925
CviAII	CATG	5 cut(s)	459, 779, 795, 812, 1112
CviQI	GTAC	3 cut(s)	228, 614, 1226
DdeI	CTNAG	5 cut(s)	21, 182, 262, 271, 1356
DinI	GGCGCC	1 cut(s)	525
EaeI	YGGCCR	1 cut(s)	39
EciI	GGCGGA	1 cut(s)	715
Eco105I	TACGTA	1 cut(s)	1229
Eco130I	CCWWGG	1 cut(s)	458
Eco24I	GRGCYC	1 cut(s)	875
Eco31I	GGTCTC	2 cut(s)	748, 934
Eco88I	CYCGRG	1 cut(s)	146
Eco91I	GGTNACC	1 cut(s)	921
EcoNI	CCTNNNNNAGG	1 cut(s)	539
EcoO65I	GGTNACC	1 cut(s)	921
EcoRI	GAATTC	1 cut(s)	623
EcoRII	CCWGG	2 cut(s)	204, 1342
EcoT14I	CCWWGG	1 cut(s)	458
EcoT38I	GRGCYC	1 cut(s)	875
EgeI	GGCGCC	1 cut(s)	525
EheI	GGCGCC	1 cut(s)	525
ErhI	CCWWGG	1 cut(s)	458
FaeI	CATG	5 cut(s)	462, 782, 798, 815, 1115
FalI	AAGNNNNNCTT	2 cut(s)	282, 314
FaqI	GGGAC	1 cut(s)	1147
FatI	CATG	5 cut(s)	458, 778, 794, 811, 1111
FbaI	TGATCA	1 cut(s)	637
FblI	GTMKAC	2 cut(s)	565, 737
Fnu4HI	GCNGC	9 cut(s)	166, 339, 482, 527, 653, 854, 1035, 1050, 1152
FokI	GGATG	2 cut(s)	299, 680
FriOI	GRGCYC	1 cut(s)	875
Fsp4HI	GCNGC	9 cut(s)	166, 339, 482, 527, 653, 854, 1035, 1050, 1152
FspBI	CTAG	4 cut(s)	98, 198, 1190, 1248
FspI	TGCGCA	1 cut(s)	581
GlaI	GCGC	2 cut(s)	525, 581
GluI	GCNGC	9 cut(s)	166, 339, 482, 527, 653, 854, 1035, 1050, 1152
GsaI	CCCAGC	5 cut(s)	453, 908, 1148, 1158, 1200
GsuI	CTGGAG	1 cut(s)	1044
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	6 cut(s)	41, 457, 783, 985, 1117, 1315
HapII	CCGG	8 cut(s)	697, 709, 875, 896, 926, 938, 986, 1118
HgaI	GACGC	2 cut(s)	903, 1337
HhaI	GCGC	2 cut(s)	526, 582
Hin1I	GRCGYC	3 cut(s)	524, 914, 1348
Hin1II	CATG	5 cut(s)	462, 782, 798, 815, 1115
Hin6I	GCGC	2 cut(s)	524, 580
HinP1I	GCGC	2 cut(s)	524, 580
HincII	GTYRAC	2 cut(s)	738, 1092
HindII	GTYRAC	2 cut(s)	738, 1092
HinfI	GANTC	8 cut(s)	184, 436, 442, 676, 892, 1057, 1067, 1100
HpaII	CCGG	8 cut(s)	697, 709, 875, 896, 926, 938, 986, 1118
HphI	GGTGA	5 cut(s)	331, 442, 568, 915, 1295
Hpy166II	GTNNAC	7 cut(s)	175, 242, 566, 738, 821, 1092, 1226
Hpy188I	TCNGA	6 cut(s)	383, 441, 834, 976, 1072, 1302
Hpy188III	TCNNGA	4 cut(s)	515, 896, 1061, 1268
Hpy8I	GTNNAC	7 cut(s)	175, 242, 566, 738, 821, 1092, 1226
Hpy99I	CGWCG	6 cut(s)	331, 503, 739, 742, 919, 1353
HpyAV	CCTTC	6 cut(s)	304, 358, 583, 652, 1037, 1324
HpyCH4III	ACNGT	2 cut(s)	373, 742
HpyCH4IV	ACGT	1 cut(s)	1228
HpyCH4V	TGCA	7 cut(s)	82, 168, 214, 652, 688, 886, 1049
HpyF10VI	GCNNNNNNNGC	1 cut(s)	267
HpyF3I	CTNAG	5 cut(s)	21, 182, 262, 271, 1356
HpySE526I	ACGT	1 cut(s)	1228
Hsp92I	GRCGYC	3 cut(s)	524, 914, 1348
Hsp92II	CATG	5 cut(s)	462, 782, 798, 815, 1115
HspAI	GCGC	2 cut(s)	524, 580
KasI	GGCGCC	1 cut(s)	523
Kpn2I	TCCGGA	1 cut(s)	895
KroI	GCCGGC	1 cut(s)	937
KroNI	GCCGGC	1 cut(s)	939
Ksp22I	TGATCA	1 cut(s)	637
LmnI	GCTCC	2 cut(s)	757, 1324
Lsp1109I	GCAGC	7 cut(s)	152, 468, 664, 840, 1021, 1061, 1138
LweI	GCATC	2 cut(s)	840, 1183
MaeI	CTAG	4 cut(s)	98, 198, 1190, 1248
MaeII	ACGT	1 cut(s)	1228
MaeIII	GTNAC	1 cut(s)	921
MflI	RGATCY	4 cut(s)	69, 661, 705, 720
MhlI	GDGCHC	1 cut(s)	875
MlsI	TGGCCA	1 cut(s)	41
MluCI	AATT	6 cut(s)	108, 472, 623, 728, 836, 1271
MluNI	TGGCCA	1 cut(s)	41
Mly113I	GGCGCC	1 cut(s)	524
MlyI	GAGTC	2 cut(s)	193, 1051
MmeI	TCCRAC	4 cut(s)	406, 954, 976, 997
Mox20I	TGGCCA	1 cut(s)	41
MroI	TCCGGA	1 cut(s)	895
MroNI	GCCGGC	1 cut(s)	937
MroXI	GAANNNNTTC	1 cut(s)	627
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	4 cut(s)	32, 596, 602, 1242
MslI	CAYNNNNRTG	3 cut(s)	575, 816, 1217
Msp20I	TGGCCA	1 cut(s)	41
MspA1I	CMGCKG	3 cut(s)	181, 655, 1097
MspI	CCGG	8 cut(s)	697, 709, 875, 896, 926, 938, 986, 1118
MspR9I	CCNGG	5 cut(s)	206, 710, 875, 1119, 1344
MvaI	CCWGG	2 cut(s)	206, 1344
MwoI	GCNNNNNNNGC	1 cut(s)	267
NaeI	GCCGGC	1 cut(s)	939
NarI	GGCGCC	1 cut(s)	524
NciI	CCSGG	3 cut(s)	710, 875, 1119
NcoI	CCATGG	1 cut(s)	458
NgoMIV	GCCGGC	1 cut(s)	937
NlaIII	CATG	5 cut(s)	462, 782, 798, 815, 1115
NlaIV	GGNNCC	7 cut(s)	71, 203, 456, 525, 707, 1299, 1314
NmeAIII	GCCGAG	1 cut(s)	314
NmuCI	GTSAC	1 cut(s)	921
NsbI	TGCGCA	1 cut(s)	581
NspI	RCATGY	1 cut(s)	798
OliI	CACNNNNGTG	1 cut(s)	1217
PaqCI	CACCTGC	1 cut(s)	68
PdiI	GCCGGC	1 cut(s)	939
PdmI	GAANNNNTTC	1 cut(s)	627
PfeI	GAWTC	6 cut(s)	436, 442, 676, 892, 1067, 1100
PflMI	CCANNNNNTGG	1 cut(s)	354
PfoI	TCCNGGA	1 cut(s)	204
PinAI	ACCGGT	1 cut(s)	925
PkrI	GCNGC	9 cut(s)	167, 340, 483, 528, 654, 855, 1036, 1051, 1153
PleI	GAGTC	2 cut(s)	192, 1051
PluTI	GGCGCC	1 cut(s)	527
PpsI	GAGTC	2 cut(s)	192, 1051
Ppu21I	YACGTR	1 cut(s)	1229
Psp6I	CCWGG	2 cut(s)	204, 1342
PspEI	GGTNACC	1 cut(s)	921
PspFI	CCCAGC	5 cut(s)	449, 904, 1144, 1154, 1196
PspGI	CCWGG	2 cut(s)	204, 1342
PspN4I	GGNNCC	7 cut(s)	71, 203, 456, 525, 707, 1299, 1314
PspPI	GGNCC	3 cut(s)	455, 1115, 1313
PsuI	RGATCY	4 cut(s)	69, 661, 705, 720
PvuII	CAGCTG	1 cut(s)	181
RsaI	GTAC	3 cut(s)	229, 615, 1227
RsaNI	GTAC	3 cut(s)	228, 614, 1226
RseI	CAYNNNNRTG	3 cut(s)	575, 816, 1217
SalI	GTCGAC	1 cut(s)	736
SaqAI	TTAA	4 cut(s)	32, 596, 602, 1242
SatI	GCNGC	9 cut(s)	166, 339, 482, 527, 653, 854, 1035, 1050, 1152
Sau96I	GGNCC	3 cut(s)	455, 1115, 1313
ScaI	AGTACT	1 cut(s)	615
SchI	GAGTC	2 cut(s)	193, 1051
ScrFI	CCNGG	5 cut(s)	206, 710, 875, 1119, 1344
SduI	GDGCHC	1 cut(s)	875
SfaNI	GCATC	2 cut(s)	840, 1183
SfcI	CTRYAG	1 cut(s)	1038
SfoI	GGCGCC	1 cut(s)	525
SgrDI	CGTCGACG	1 cut(s)	736
SmiMI	CAYNNNNRTG	3 cut(s)	575, 816, 1217
SmlI	CTYRAG	2 cut(s)	515, 539
SmoI	CTYRAG	2 cut(s)	515, 539
SnaBI	TACGTA	1 cut(s)	1229
SpeI	ACTAGT	1 cut(s)	1247
Sse9I	AATT	6 cut(s)	108, 472, 623, 728, 836, 1271
SsiI	CCGC	9 cut(s)	338, 527, 554, 647, 655, 700, 863, 941, 1095
SspDI	GGCGCC	1 cut(s)	523
SspMI	CTAG	4 cut(s)	98, 198, 1190, 1248
StyD4I	CCNGG	5 cut(s)	204, 708, 873, 1117, 1342
StyI	CCWWGG	1 cut(s)	458
TaaI	ACNGT	2 cut(s)	373, 742
TaiI	ACGT	1 cut(s)	1231
TaqI	TCGA	5 cut(s)	305, 737, 869, 1103, 1351
TasI	AATT	6 cut(s)	108, 472, 623, 728, 836, 1271
TatI	WGTACW	1 cut(s)	613
TauI	GCSGC	2 cut(s)	341, 529
TfiI	GAWTC	6 cut(s)	436, 442, 676, 892, 1067, 1100
Tru1I	TTAA	4 cut(s)	32, 596, 602, 1242
Tru9I	TTAA	4 cut(s)	32, 596, 602, 1242
TscAI	CASTG	3 cut(s)	270, 378, 960
TseFI	GTSAC	1 cut(s)	921
TseI	GCWGC	7 cut(s)	165, 481, 652, 853, 1034, 1049, 1151
Tsp45I	GTSAC	1 cut(s)	921
TspDTI	ATGAA	1 cut(s)	303
TspGWI	ACGGA	1 cut(s)	776
TspRI	CASTG	3 cut(s)	270, 378, 960
Van91I	CCANNNNNTGG	1 cut(s)	354
XagI	CCTNNNNNAGG	1 cut(s)	539
XapI	RAATTY	3 cut(s)	623, 728, 1271
XceI	RCATGY	1 cut(s)	798
XmiI	GTMKAC	2 cut(s)	565, 737
XmnI	GAANNNNTTC	1 cut(s)	627
XspI	CTAG	4 cut(s)	98, 198, 1190, 1248
ZrmI	AGTACT	1 cut(s)	615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.