Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 113 |
| AciI | CCGC | 1 cut(s) | 411 |
| AclWI | GGATC | 1 cut(s) | 773 |
| AcoI | YGGCCR | 1 cut(s) | 363 |
| AcuI | CTGAAG | 1 cut(s) | 552 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 76, 457, 478 |
| AgsI | TTSAA | 1 cut(s) | 644 |
| AjnI | CCWGG | 3 cut(s) | 360, 508, 700 |
| AleI | CACNNNNGTG | 1 cut(s) | 510 |
| AluBI | AGCT | 4 cut(s) | 165, 371, 398, 684 |
| AluI | AGCT | 4 cut(s) | 165, 371, 398, 684 |
| Alw26I | GTCTC | 2 cut(s) | 27, 710 |
| AlwI | GGATC | 1 cut(s) | 773 |
| AoxI | GGCC | 5 cut(s) | 286, 358, 363, 448, 672 |
| ApeKI | GCWGC | 2 cut(s) | 398, 653 |
| AspLEI | GCGC | 2 cut(s) | 114, 478 |
| AspS9I | GGNCC | 1 cut(s) | 287 |
| AsuC2I | CCSGG | 2 cut(s) | 432, 480 |
| BalI | TGGCCA | 1 cut(s) | 365 |
| BbsI | GAAGAC | 2 cut(s) | 596, 770 |
| BbvI | GCAGC | 2 cut(s) | 385, 640 |
| BciT130I | CCWGG | 3 cut(s) | 362, 510, 702 |
| BcnI | CCSGG | 2 cut(s) | 432, 480 |
| BcoDI | GTCTC | 2 cut(s) | 27, 710 |
| BfmI | CTRYAG | 1 cut(s) | 300 |
| BglII | AGATCT | 1 cut(s) | 277 |
| BisI | GCNGC | 2 cut(s) | 399, 654 |
| BlsI | GCNGC | 2 cut(s) | 400, 655 |
| Bme1390I | CCNGG | 5 cut(s) | 362, 432, 480, 510, 702 |
| BmgT120I | GGNCC | 1 cut(s) | 287 |
| BmrFI | CCNGG | 5 cut(s) | 362, 432, 480, 510, 702 |
| BmsI | GCATC | 1 cut(s) | 147 |
| BpiI | GAAGAC | 2 cut(s) | 596, 770 |
| Bpu10I | CCTNAGC | 1 cut(s) | 176 |
| BpuEI | CTTGAG | 2 cut(s) | 173, 785 |
| BpuMI | CCSGG | 2 cut(s) | 432, 480 |
| BsaAI | YACGTR | 1 cut(s) | 586 |
| BsaI | GGTCTC | 2 cut(s) | 27, 710 |
| BsaJI | CCNNGG | 3 cut(s) | 479, 508, 811 |
| BsaWI | WCCGGW | 1 cut(s) | 69 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 76, 457, 478 |
| Bse1I | ACTGG | 4 cut(s) | 6, 289, 696, 826 |
| BseBI | CCWGG | 3 cut(s) | 362, 510, 702 |
| BseDI | CCNNGG | 3 cut(s) | 479, 508, 811 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 76, 457, 478 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseNI | ACTGG | 4 cut(s) | 6, 289, 696, 826 |
| BseXI | GCAGC | 2 cut(s) | 385, 640 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| Bsh1285I | CGRYCG | 1 cut(s) | 148 |
| BshFI | GGCC | 5 cut(s) | 288, 360, 365, 450, 674 |
| BsiEI | CGRYCG | 1 cut(s) | 148 |
| BsiSI | CCGG | 3 cut(s) | 70, 431, 479 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 76, 457, 478 |
| BsmAI | GTCTC | 2 cut(s) | 27, 710 |
| BsnI | GGCC | 5 cut(s) | 288, 360, 365, 450, 674 |
| Bso31I | GGTCTC | 2 cut(s) | 27, 710 |
| Bsp143I | GATC | 3 cut(s) | 145, 277, 778 |
| BspACI | CCGC | 1 cut(s) | 411 |
| BspANI | GGCC | 5 cut(s) | 288, 360, 365, 450, 674 |
| BspCNI | CTCAG | 1 cut(s) | 179 |
| BspMAI | CTGCAG | 1 cut(s) | 304 |
| BspPI | GGATC | 1 cut(s) | 773 |
| BspTNI | GGTCTC | 2 cut(s) | 27, 710 |
| BsrI | ACTGG | 4 cut(s) | 6, 289, 696, 826 |
| BssECI | CCNNGG | 3 cut(s) | 479, 508, 811 |
| BssMI | GATC | 3 cut(s) | 145, 277, 778 |
| BssT1I | CCWWGG | 1 cut(s) | 811 |
| Bst2UI | CCWGG | 3 cut(s) | 362, 510, 702 |
| Bst4CI | ACNGT | 1 cut(s) | 337 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 247 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 731 |
| BstBAI | YACGTR | 1 cut(s) | 586 |
| BstDEI | CTNAG | 2 cut(s) | 166, 176 |
| BstHHI | GCGC | 2 cut(s) | 114, 478 |
| BstKTI | GATC | 3 cut(s) | 148, 280, 781 |
| BstMAI | GTCTC | 2 cut(s) | 27, 710 |
| BstMBI | GATC | 3 cut(s) | 145, 277, 778 |
| BstMCI | CGRYCG | 1 cut(s) | 148 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 294, 419, 731 |
| BstNI | CCWGG | 3 cut(s) | 362, 510, 702 |
| BstNSI | RCATGY | 1 cut(s) | 184 |
| BstSCI | CCNGG | 5 cut(s) | 360, 430, 478, 508, 700 |
| BstSFI | CTRYAG | 1 cut(s) | 300 |
| BstV1I | GCAGC | 2 cut(s) | 385, 640 |
| BstV2I | GAAGAC | 2 cut(s) | 596, 770 |
| BstX2I | RGATCY | 1 cut(s) | 277 |
| BstYI | RGATCY | 1 cut(s) | 277 |
| BsuRI | GGCC | 5 cut(s) | 288, 360, 365, 450, 674 |
| BtsI | GCAGTG | 2 cut(s) | 549, 697 |
| BtsIMutI | CAGTG | 6 cut(s) | 13, 333, 346, 549, 697, 819 |
| CfoI | GCGC | 2 cut(s) | 114, 478 |
| Cfr13I | GGNCC | 1 cut(s) | 287 |
| CviAII | CATG | 5 cut(s) | 76, 181, 248, 613, 665 |
| DdeI | CTNAG | 2 cut(s) | 166, 176 |
| DpnI | GATC | 3 cut(s) | 147, 279, 780 |
| DpnII | GATC | 3 cut(s) | 145, 277, 778 |
| EaeI | YGGCCR | 1 cut(s) | 363 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 247 |
| EarI | CTCTTC | 2 cut(s) | 218, 247 |
| Eco130I | CCWWGG | 1 cut(s) | 811 |
| Eco31I | GGTCTC | 2 cut(s) | 27, 710 |
| Eco57I | CTGAAG | 1 cut(s) | 552 |
| EcoRII | CCWGG | 3 cut(s) | 360, 508, 700 |
| EcoT14I | CCWWGG | 1 cut(s) | 811 |
| ErhI | CCWWGG | 1 cut(s) | 811 |
| FaeI | CATG | 5 cut(s) | 79, 184, 251, 616, 668 |
| FatI | CATG | 5 cut(s) | 75, 180, 247, 612, 664 |
| FauI | CCCGC | 1 cut(s) | 418 |
| Fnu4HI | GCNGC | 2 cut(s) | 399, 654 |
| Fsp4HI | GCNGC | 2 cut(s) | 399, 654 |
| FspI | TGCGCA | 1 cut(s) | 113 |
| GlaI | GCGC | 2 cut(s) | 113, 477 |
| GluI | GCNGC | 2 cut(s) | 399, 654 |
| HaeIII | GGCC | 5 cut(s) | 288, 360, 365, 450, 674 |
| HapII | CCGG | 3 cut(s) | 70, 431, 479 |
| HhaI | GCGC | 2 cut(s) | 114, 478 |
| Hin1II | CATG | 5 cut(s) | 79, 184, 251, 616, 668 |
| Hin6I | GCGC | 2 cut(s) | 112, 476 |
| HinP1I | GCGC | 2 cut(s) | 112, 476 |
| HindIII | AAGCTT | 1 cut(s) | 682 |
| HinfI | GANTC | 2 cut(s) | 592, 807 |
| HpaII | CCGG | 3 cut(s) | 70, 431, 479 |
| Hpy166II | GTNNAC | 1 cut(s) | 583 |
| Hpy188I | TCNGA | 1 cut(s) | 520 |
| Hpy188III | TCNNGA | 1 cut(s) | 793 |
| Hpy8I | GTNNAC | 1 cut(s) | 583 |
| HpyAV | CCTTC | 1 cut(s) | 756 |
| HpyCH4III | ACNGT | 1 cut(s) | 337 |
| HpyCH4IV | ACGT | 1 cut(s) | 585 |
| HpyCH4V | TGCA | 6 cut(s) | 11, 75, 275, 302, 315, 637 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 294, 419, 731 |
| HpyF3I | CTNAG | 2 cut(s) | 166, 176 |
| HpySE526I | ACGT | 1 cut(s) | 585 |
| Hsp92II | CATG | 5 cut(s) | 79, 184, 251, 616, 668 |
| HspAI | GCGC | 2 cut(s) | 112, 476 |
| Kzo9I | GATC | 3 cut(s) | 145, 277, 778 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| Lsp1109I | GCAGC | 2 cut(s) | 385, 640 |
| LweI | GCATC | 1 cut(s) | 147 |
| MaeII | ACGT | 1 cut(s) | 585 |
| MaeIII | GTNAC | 4 cut(s) | 169, 331, 341, 403 |
| MalI | GATC | 3 cut(s) | 147, 279, 780 |
| MboI | GATC | 3 cut(s) | 145, 277, 778 |
| MboII | GAAGA | 7 cut(s) | 205, 223, 234, 558, 601, 741, 775 |
| MflI | RGATCY | 1 cut(s) | 277 |
| MlsI | TGGCCA | 1 cut(s) | 365 |
| MluCI | AATT | 3 cut(s) | 104, 199, 425 |
| MluNI | TGGCCA | 1 cut(s) | 365 |
| MlyI | GAGTC | 2 cut(s) | 586, 816 |
| MnlI | CCTC | 6 cut(s) | 56, 227, 250, 461, 531, 725 |
| Mox20I | TGGCCA | 1 cut(s) | 365 |
| MscI | TGGCCA | 1 cut(s) | 365 |
| MseI | TTAA | 1 cut(s) | 597 |
| MslI | CAYNNNNRTG | 2 cut(s) | 185, 510 |
| Msp20I | TGGCCA | 1 cut(s) | 365 |
| MspA1I | CMGCKG | 1 cut(s) | 371 |
| MspI | CCGG | 3 cut(s) | 70, 431, 479 |
| MspR9I | CCNGG | 5 cut(s) | 362, 432, 480, 510, 702 |
| MvaI | CCWGG | 3 cut(s) | 362, 510, 702 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 294, 419, 731 |
| NciI | CCSGG | 2 cut(s) | 432, 480 |
| NdeII | GATC | 3 cut(s) | 145, 277, 778 |
| NlaIII | CATG | 5 cut(s) | 79, 184, 251, 616, 668 |
| NmuCI | GTSAC | 2 cut(s) | 331, 341 |
| NsbI | TGCGCA | 1 cut(s) | 113 |
| NspI | RCATGY | 1 cut(s) | 184 |
| OliI | CACNNNNGTG | 1 cut(s) | 510 |
| PkrI | GCNGC | 2 cut(s) | 400, 655 |
| Ple19I | CGATCG | 1 cut(s) | 148 |
| PleI | GAGTC | 2 cut(s) | 586, 815 |
| PpsI | GAGTC | 2 cut(s) | 586, 815 |
| Ppu21I | YACGTR | 1 cut(s) | 586 |
| Psp6I | CCWGG | 3 cut(s) | 360, 508, 700 |
| PspGI | CCWGG | 3 cut(s) | 360, 508, 700 |
| PspPI | GGNCC | 1 cut(s) | 287 |
| PstI | CTGCAG | 1 cut(s) | 304 |
| PsuI | RGATCY | 1 cut(s) | 277 |
| PvuI | CGATCG | 1 cut(s) | 148 |
| PvuII | CAGCTG | 1 cut(s) | 371 |
| RseI | CAYNNNNRTG | 2 cut(s) | 185, 510 |
| SaqAI | TTAA | 1 cut(s) | 597 |
| SatI | GCNGC | 2 cut(s) | 399, 654 |
| Sau3AI | GATC | 3 cut(s) | 145, 277, 778 |
| Sau96I | GGNCC | 1 cut(s) | 287 |
| SbfI | CCTGCAGG | 1 cut(s) | 304 |
| SchI | GAGTC | 2 cut(s) | 586, 816 |
| ScrFI | CCNGG | 5 cut(s) | 362, 432, 480, 510, 702 |
| SdaI | CCTGCAGG | 1 cut(s) | 304 |
| SetI | ASST | 9 cut(s) | 20, 167, 373, 400, 474, 588, 686, 706, 748 |
| SfaNI | GCATC | 1 cut(s) | 147 |
| SfcI | CTRYAG | 1 cut(s) | 300 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 185, 510 |
| SmlI | CTYRAG | 2 cut(s) | 152, 800 |
| SmoI | CTYRAG | 2 cut(s) | 152, 800 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 304 |
| Sse9I | AATT | 3 cut(s) | 104, 199, 425 |
| SsiI | CCGC | 1 cut(s) | 411 |
| StyD4I | CCNGG | 5 cut(s) | 360, 430, 478, 508, 700 |
| StyI | CCWWGG | 1 cut(s) | 811 |
| TaaI | ACNGT | 1 cut(s) | 337 |
| TaiI | ACGT | 1 cut(s) | 588 |
| TaqI | TCGA | 2 cut(s) | 148, 717 |
| TasI | AATT | 3 cut(s) | 104, 199, 425 |
| Tru1I | TTAA | 1 cut(s) | 597 |
| Tru9I | TTAA | 1 cut(s) | 597 |
| TscAI | CASTG | 6 cut(s) | 13, 340, 346, 556, 697, 826 |
| TseFI | GTSAC | 2 cut(s) | 331, 341 |
| TseI | GCWGC | 2 cut(s) | 398, 653 |
| Tsp45I | GTSAC | 2 cut(s) | 331, 341 |
| TspDTI | ATGAA | 2 cut(s) | 42, 741 |
| TspRI | CASTG | 6 cut(s) | 13, 340, 346, 556, 697, 826 |
| XceI | RCATGY | 1 cut(s) | 184 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 506 |