Rmu_sc0008730.1_g000003

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008730.1
OG0000123
Physical Location & Seq
Forward (+)
11400 .. 12317
918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008730.1_g000003.1.cds

Sequence Viewer

Length: 918 bp
atggcggcggtgtctccttcatcagagaaggctgtggtgagtctggttggtggagaggatgctatccacgattcgtttttctatctcagtggccgacttctgtccaagaaggcggtggtgcttccatcgttctcggcggcgatctccaatatttggggagtgaaggagagagttttgatccgacagaaggaagaggacatctttgtcttccaatttaaggagatggaggtgaagaatcgagtactctctgggggtccttggttctataacaactccatgttgttgttggcagactatgacggaatctctgccctcgatatggcgccgctgcatctccttgaggtgtgggtggctgtgaaagggttacggattgcgatgcgaaatgagaaagctcttaccctaatcagacgggctttgggggacttcgtgcgggttgaccaaggagcggtgctgagaaaggatcctatccagaggatccgtgtgattcaagatgtccgccggaggatttggccgcgacggatgtttgagttttcaccggttgtttcggtgatggtggagttgcaatatgagaaatgccatgcgctgtgtgcggcttgtggtttcttcggccatgggggtggttcttgtgacaggaggctggcggaggaggtgcccttgttggcggtgccgggccgaggtgacttgaaccgtggtctagactctgcacctggatcagaagcgtctgtggaggcggtcgtggagccgaagatgctctttaaggcgccgacggagctgggttttgtgacggcgggggctggagaggctgtggtggttgagggtggaccgacatcgggggctgcaagcaatacagctgcagttccggaaaaaccggcgggaaaccctaattttgaattagggttgaccgcaggggttgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

305

Amino Acids

33.01

Weight (kDa)

6.47

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 203
AccB1I GGYRCC 4 cut(s) 322, 649, 664, 760
AccB7I CCANNNNNTGG 1 cut(s) 153
AccBSI CCGCTC 1 cut(s) 446
AccII CGCG 1 cut(s) 514
AccIII TCCGGA 1 cut(s) 859
AclWI GGATC 6 cut(s) 172, 455, 468, 469, 482, 718
AcoI YGGCCR 3 cut(s) 91, 509, 607
AcyI GRCGYC 2 cut(s) 323, 761
AfaI GTAC 1 cut(s) 243
AfiI CCNNNNNNNGG 7 cut(s) 153, 187, 217, 319, 445, 674, 830
AgeI ACCGGT 1 cut(s) 535
AgsI TTSAA 3 cut(s) 488, 685, 890
AjnI CCWGG 1 cut(s) 706
AluBI AGCT 3 cut(s) 392, 772, 851
AluI AGCT 3 cut(s) 392, 772, 851
Alw26I GTCTC 1 cut(s) 18
AlwI GGATC 6 cut(s) 172, 455, 468, 469, 482, 718
Aor13HI TCCGGA 1 cut(s) 859
AoxI GGCC 4 cut(s) 91, 509, 607, 670
ApeKI GCWGC 3 cut(s) 328, 836, 851
AsiGI ACCGGT 1 cut(s) 535
AspLEI GCGC 3 cut(s) 325, 583, 763
AspS9I GGNCC 3 cut(s) 254, 670, 821
AsuC2I CCSGG 1 cut(s) 669
AsuHPI GGTGA 5 cut(s) 49, 241, 525, 559, 689
AvaII GGWCC 2 cut(s) 254, 821
BaeGI GKGCMC 1 cut(s) 654
BamHI GGATCC 2 cut(s) 460, 474
BanI GGYRCC 4 cut(s) 322, 649, 664, 760
BbsI GAAGAC 1 cut(s) 199
BbvI GCAGC 3 cut(s) 315, 823, 838
BccI CCATC 3 cut(s) 133, 217, 544
BceAI ACGGC 1 cut(s) 801
BciT130I CCWGG 1 cut(s) 708
BcnI CCSGG 1 cut(s) 669
BcoDI GTCTC 1 cut(s) 18
BfaI CTAG 2 cut(s) 695, 916
BfmI CTRYAG 1 cut(s) 852
BfoI RGCGCY 2 cut(s) 326, 764
BisI GCNGC 8 cut(s) 6, 138, 326, 329, 512, 591, 837, 852
BlsI GCNGC 8 cut(s) 7, 139, 327, 330, 513, 592, 838, 853
BmcAI AGTACT 1 cut(s) 243
Bme1390I CCNGG 2 cut(s) 669, 708
Bme18I GGWCC 2 cut(s) 254, 821
BmgT120I GGNCC 3 cut(s) 254, 670, 821
BmiI GGNNCC 8 cut(s) 255, 324, 462, 476, 651, 666, 741, 762
BmrFI CCNGG 2 cut(s) 669, 708
BmsI GCATC 4 cut(s) 49, 340, 366, 738
BoxI GACNNNNGTC 1 cut(s) 100
BpiI GAAGAC 1 cut(s) 199
BpmI CTGGAG 1 cut(s) 816
BpuEI CTTGAG 1 cut(s) 359
BpuMI CCSGG 1 cut(s) 669
BsaHI GRCGYC 2 cut(s) 323, 761
BsaJI CCNNGG 5 cut(s) 257, 439, 610, 673, 688
BsaWI WCCGGW 2 cut(s) 535, 859
BsaXI ACNNNNNCTCC 2 cut(s) 789, 819
Bsc4I CCNNNNNNNGG 7 cut(s) 153, 187, 217, 319, 445, 674, 830
Bse118I RCCGGY 2 cut(s) 535, 868
BseAI TCCGGA 1 cut(s) 859
BseBI CCWGG 1 cut(s) 708
BseDI CCNNGG 5 cut(s) 257, 439, 610, 673, 688
BseGI GGATG 2 cut(s) 64, 525
BseLI CCNNNNNNNGG 7 cut(s) 153, 187, 217, 319, 445, 674, 830
BseMII CTCAG 2 cut(s) 100, 443
BseRI GAGGAG 1 cut(s) 659
BseSI GKGCMC 1 cut(s) 654
BseXI GCAGC 3 cut(s) 315, 823, 838
BseYI CCCAGC 1 cut(s) 772
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 1 cut(s) 514
Bsh1285I CGRYCG 1 cut(s) 735
BshFI GGCC 4 cut(s) 93, 511, 609, 672
BshNI GGYRCC 4 cut(s) 322, 649, 664, 760
BshTI ACCGGT 1 cut(s) 535
BsiEI CGRYCG 1 cut(s) 735
BsiSI CCGG 5 cut(s) 499, 536, 668, 860, 869
BslFI GGGAC 1 cut(s) 434
BslI CCNNNNNNNGG 7 cut(s) 153, 187, 217, 319, 445, 674, 830
BsmAI GTCTC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 434
BsnI GGCC 4 cut(s) 93, 511, 609, 672
Bsp1286I GDGCHC 1 cut(s) 654
Bsp13I TCCGGA 1 cut(s) 859
Bsp143I GATC 5 cut(s) 141, 177, 460, 474, 710
Bsp19I CCATGG 1 cut(s) 610
BspANI GGCC 4 cut(s) 93, 511, 609, 672
BspCNI CTCAG 2 cut(s) 99, 444
BspEI TCCGGA 1 cut(s) 859
BspFNI CGCG 1 cut(s) 514
BspLI GGNNCC 8 cut(s) 255, 324, 462, 476, 651, 666, 741, 762
BspMAI CTGCAG 1 cut(s) 856
BspPI GGATC 6 cut(s) 172, 455, 468, 469, 482, 718
BspT107I GGYRCC 4 cut(s) 322, 649, 664, 760
BsrBI CCGCTC 1 cut(s) 446
BsrFI RCCGGY 2 cut(s) 535, 868
BssAI RCCGGY 2 cut(s) 535, 868
BssECI CCNNGG 5 cut(s) 257, 439, 610, 673, 688
BssMI GATC 5 cut(s) 141, 177, 460, 474, 710
BssNI GRCGYC 2 cut(s) 323, 761
BssT1I CCWWGG 3 cut(s) 257, 439, 610
Bst2UI CCWGG 1 cut(s) 708
Bst4CI ACNGT 1 cut(s) 689
Bst6I CTCTTC 1 cut(s) 186
BstACI GRCGYC 2 cut(s) 323, 761
BstC8I GCNNGC 2 cut(s) 639, 841
BstDEI CTNAG 2 cut(s) 86, 452
BstDSI CCRYGG 2 cut(s) 610, 688
BstF5I GGATG 2 cut(s) 64, 525
BstFNI CGCG 1 cut(s) 514
BstH2I RGCGCY 2 cut(s) 326, 764
BstHHI GCGC 3 cut(s) 325, 583, 763
BstKTI GATC 5 cut(s) 144, 180, 463, 477, 713
BstMAI GTCTC 1 cut(s) 18
BstMBI GATC 5 cut(s) 141, 177, 460, 474, 710
BstMCI CGRYCG 1 cut(s) 735
BstMWI GCNNNNNNNGC 4 cut(s) 587, 748, 769, 800
BstNI CCWGG 1 cut(s) 708
BstPAI GACNNNNGTC 1 cut(s) 100
BstSCI CCNGG 2 cut(s) 667, 706
BstSFI CTRYAG 1 cut(s) 852
BstSLI GKGCMC 1 cut(s) 654
BstUI CGCG 1 cut(s) 514
BstV1I GCAGC 3 cut(s) 315, 823, 838
BstV2I GAAGAC 1 cut(s) 199
BstX2I RGATCY 2 cut(s) 460, 474
BstXI CCANNNNNNTGG 1 cut(s) 617
BstYI RGATCY 2 cut(s) 460, 474
BsuRI GGCC 4 cut(s) 93, 511, 609, 672
BtgI CCRYGG 2 cut(s) 610, 688
BtgZI GCGATG 1 cut(s) 389
BtsCI GGATG 2 cut(s) 64, 525
BtsIMutI CAGTG 1 cut(s) 94
Cac8I GCNNGC 2 cut(s) 639, 841
CfoI GCGC 3 cut(s) 325, 583, 763
Cfr10I RCCGGY 2 cut(s) 535, 868
Cfr13I GGNCC 3 cut(s) 254, 670, 821
CseI GACGC 1 cut(s) 708
Csp6I GTAC 1 cut(s) 242
CspAI ACCGGT 1 cut(s) 535
CviAII CATG 3 cut(s) 277, 578, 611
CviQI GTAC 1 cut(s) 242
DdeI CTNAG 2 cut(s) 86, 452
DinI GGCGCC 2 cut(s) 324, 762
DpnI GATC 5 cut(s) 143, 179, 462, 476, 712
DpnII GATC 5 cut(s) 141, 177, 460, 474, 710
DrdI GACNNNNNNGTC 1 cut(s) 203
DseDI GACNNNNNNGTC 1 cut(s) 203
EaeI YGGCCR 3 cut(s) 91, 509, 607
Eam1104I CTCTTC 1 cut(s) 186
EarI CTCTTC 1 cut(s) 186
EciI GGCGGA 2 cut(s) 485, 656
Eco130I CCWWGG 3 cut(s) 257, 439, 610
Eco47I GGWCC 2 cut(s) 254, 821
EcoO109I RGGNCCY 1 cut(s) 254
EcoRII CCWGG 1 cut(s) 706
EcoT14I CCWWGG 3 cut(s) 257, 439, 610
EgeI GGCGCC 2 cut(s) 324, 762
EheI GGCGCC 2 cut(s) 324, 762
ErhI CCWWGG 3 cut(s) 257, 439, 610
FaeI CATG 3 cut(s) 280, 581, 614
FaiI YATR 7 cut(s) 267, 278, 297, 320, 567, 579, 612
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 1 cut(s) 434
FatI CATG 3 cut(s) 276, 577, 610
FauI CCCGC 3 cut(s) 423, 781, 865
Fnu4HI GCNGC 8 cut(s) 6, 138, 326, 329, 512, 591, 837, 852
FokI GGATG 2 cut(s) 71, 532
Fsp4HI GCNGC 8 cut(s) 6, 138, 326, 329, 512, 591, 837, 852
FspBI CTAG 2 cut(s) 695, 916
GlaI GCGC 3 cut(s) 324, 582, 762
GluI GCNGC 8 cut(s) 6, 138, 326, 329, 512, 591, 837, 852
GsaI CCCAGC 1 cut(s) 776
GsuI CTGGAG 1 cut(s) 816
HaeII RGCGCY 2 cut(s) 326, 764
HaeIII GGCC 4 cut(s) 93, 511, 609, 672
HapII CCGG 5 cut(s) 499, 536, 668, 860, 869
HgaI GACGC 1 cut(s) 708
HhaI GCGC 3 cut(s) 325, 583, 763
Hin1I GRCGYC 2 cut(s) 323, 761
Hin1II CATG 3 cut(s) 280, 581, 614
Hin6I GCGC 3 cut(s) 323, 581, 761
HinP1I GCGC 3 cut(s) 323, 581, 761
HincII GTYRAC 3 cut(s) 436, 900, 913
HindII GTYRAC 3 cut(s) 436, 900, 913
HinfI GANTC 6 cut(s) 40, 71, 235, 303, 484, 698
HpaII CCGG 5 cut(s) 499, 536, 668, 860, 869
HphI GGTGA 5 cut(s) 49, 241, 525, 559, 689
Hpy166II GTNNAC 4 cut(s) 436, 821, 900, 913
Hpy188I TCNGA 4 cut(s) 25, 182, 407, 715
Hpy188III TCNNGA 4 cut(s) 469, 488, 695, 860
Hpy8I GTNNAC 4 cut(s) 436, 821, 900, 913
Hpy99I CGWCG 2 cut(s) 519, 769
HpyAV CCTTC 5 cut(s) 22, 27, 103, 157, 181
HpyCH4III ACNGT 1 cut(s) 689
HpyCH4V TGCA 5 cut(s) 331, 562, 704, 839, 854
HpyF10VI GCNNNNNNNGC 4 cut(s) 587, 748, 769, 800
HpyF3I CTNAG 2 cut(s) 86, 452
Hsp92I GRCGYC 2 cut(s) 323, 761
Hsp92II CATG 3 cut(s) 280, 581, 614
HspAI GCGC 3 cut(s) 323, 581, 761
KasI GGCGCC 2 cut(s) 322, 760
Kpn2I TCCGGA 1 cut(s) 859
Kzo9I GATC 5 cut(s) 141, 177, 460, 474, 710
LmnI GCTCC 3 cut(s) 443, 739, 769
Lsp1109I GCAGC 3 cut(s) 315, 823, 838
LweI GCATC 4 cut(s) 49, 340, 366, 738
MaeI CTAG 2 cut(s) 695, 916
MaeIII GTNAC 4 cut(s) 363, 626, 677, 781
MalI GATC 5 cut(s) 143, 179, 462, 476, 712
MbiI CCGCTC 1 cut(s) 446
MboI GATC 5 cut(s) 141, 177, 460, 474, 710
MboII GAAGA 5 cut(s) 199, 203, 244, 595, 757
MflI RGATCY 2 cut(s) 460, 474
MhlI GDGCHC 1 cut(s) 654
MluCI AATT 3 cut(s) 212, 883, 890
Mly113I GGCGCC 2 cut(s) 323, 761
MlyI GAGTC 2 cut(s) 49, 692
MmeI TCCRAC 1 cut(s) 205
MroI TCCGGA 1 cut(s) 859
MseI TTAA 2 cut(s) 216, 756
MslI CAYNNNNRTG 1 cut(s) 615
MspA1I CMGCKG 2 cut(s) 328, 851
MspI CCGG 5 cut(s) 499, 536, 668, 860, 869
MspR9I CCNGG 2 cut(s) 669, 708
MvaI CCWGG 1 cut(s) 708
MvnI CGCG 1 cut(s) 514
MwoI GCNNNNNNNGC 4 cut(s) 587, 748, 769, 800
NarI GGCGCC 2 cut(s) 323, 761
NciI CCSGG 1 cut(s) 669
NcoI CCATGG 1 cut(s) 610
NdeII GATC 5 cut(s) 141, 177, 460, 474, 710
NlaIII CATG 3 cut(s) 280, 581, 614
NlaIV GGNNCC 8 cut(s) 255, 324, 462, 476, 651, 666, 741, 762
NmeAIII GCCGAG 2 cut(s) 113, 698
NmuCI GTSAC 3 cut(s) 626, 677, 781
PfeI GAWTC 4 cut(s) 71, 235, 303, 484
PflMI CCANNNNNTGG 1 cut(s) 153
PinAI ACCGGT 1 cut(s) 535
PkrI GCNGC 8 cut(s) 7, 139, 327, 330, 513, 592, 838, 853
PleI GAGTC 2 cut(s) 48, 692
PluTI GGCGCC 2 cut(s) 326, 764
PpsI GAGTC 2 cut(s) 48, 692
PpuMI RGGWCCY 1 cut(s) 254
PshAI GACNNNNGTC 1 cut(s) 100
Psp5II RGGWCCY 1 cut(s) 254
Psp6I CCWGG 1 cut(s) 706
PspFI CCCAGC 1 cut(s) 772
PspGI CCWGG 1 cut(s) 706
PspN4I GGNNCC 8 cut(s) 255, 324, 462, 476, 651, 666, 741, 762
PspPI GGNCC 3 cut(s) 254, 670, 821
PspPPI RGGWCCY 1 cut(s) 254
PstI CTGCAG 1 cut(s) 856
PsuI RGATCY 2 cut(s) 460, 474
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 1 cut(s) 243
RsaNI GTAC 1 cut(s) 242
RseI CAYNNNNRTG 1 cut(s) 615
SaqAI TTAA 2 cut(s) 216, 756
SatI GCNGC 8 cut(s) 6, 138, 326, 329, 512, 591, 837, 852
Sau3AI GATC 5 cut(s) 141, 177, 460, 474, 710
Sau96I GGNCC 3 cut(s) 254, 670, 821
ScaI AGTACT 1 cut(s) 243
SchI GAGTC 2 cut(s) 49, 692
ScrFI CCNGG 2 cut(s) 669, 708
SduI GDGCHC 1 cut(s) 654
SetI ASST 8 cut(s) 231, 345, 394, 651, 679, 709, 774, 853
SfaNI GCATC 4 cut(s) 49, 340, 366, 738
SfcI CTRYAG 1 cut(s) 852
SfoI GGCGCC 2 cut(s) 324, 762
SinI GGWCC 2 cut(s) 254, 821
SmiMI CAYNNNNRTG 1 cut(s) 615
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 3 cut(s) 212, 883, 890
SspDI GGCGCC 2 cut(s) 322, 760
SspI AATATT 1 cut(s) 151
SspMI CTAG 2 cut(s) 695, 916
StyD4I CCNGG 2 cut(s) 667, 706
StyI CCWWGG 3 cut(s) 257, 439, 610
TaaI ACNGT 1 cut(s) 689
TaqI TCGA 2 cut(s) 238, 315
TaqII GACCGA 1 cut(s) 838
TasI AATT 3 cut(s) 212, 883, 890
TatI WGTACW 1 cut(s) 241
TauI GCSGC 5 cut(s) 8, 140, 328, 514, 593
TfiI GAWTC 4 cut(s) 71, 235, 303, 484
Tru1I TTAA 2 cut(s) 216, 756
Tru9I TTAA 2 cut(s) 216, 756
TscAI CASTG 1 cut(s) 94
TseFI GTSAC 3 cut(s) 626, 677, 781
TseI GCWGC 3 cut(s) 328, 836, 851
Tsp45I GTSAC 3 cut(s) 626, 677, 781
TspDTI ATGAA 1 cut(s) 9
TspGWI ACGGA 5 cut(s) 315, 382, 467, 532, 782
TspRI CASTG 1 cut(s) 94
Van91I CCANNNNNTGG 1 cut(s) 153
VpaK11BI GGWCC 2 cut(s) 254, 821
XbaI TCTAGA 1 cut(s) 694
XcmI CCANNNNNNNNNTGG 2 cut(s) 112, 283
XspI CTAG 2 cut(s) 695, 916
ZrmI AGTACT 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.