Rmu_sc0000808.1_g000032

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000808.1
OG0000123
Physical Location & Seq
Reverse (-)
134375 .. 135349
975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000808.1_g000032.1.cds

Sequence Viewer

Length: 924 bp
atgctattattggctgattatgatggtgtaggggctctagcagaggctcctctgcactttctggaggtgtgggtggtggtgacgggcttgagtgtggctatgcgcaatgtgcaggctctcacccagcttggcaacatgttgggcacttttgtgaaggctaatcatgtggcgttgcaaaggaaggaggctactcagaggatccgattgccggcagttttggtggagctggagttccgctatgaaaagtgtcgagggatctgtaagaggtgtggtttcttcacccatgatggaggggattgtgaccgaaagttggtgaaggaagtggcggtggaggacctggctctgccgttgaaagctttacagaaggagatgttgtcgtccaatggtacagtggaaataccgtcgtcgtctcttgctatggtggaggcgctgcagaccgggtcggcgaatctggtactggcgctgggctctagagccgtgcaagatatggaggcagggcatgatgcggcggggatagagctgagccctcaaatggcagccccgagtttttcagcgagaatccctaatttcaaattaaggttgaccgctgggcttaggttgacctgtttgaaaggtgtcaggccgggttttgggtcagttggacttggacctgaaggctctggacctattgctgatggtctccttaggcacccatctagggttttgggtgtgaggaggcttcgggaagaggactggcttgaggatgggaagcgcctgaagttttctgaaggcttagccgatgttccagtcactaatgggaaagttccaaagaagaagggtcgaccacgcgatagtcgaaataagcccaagtctgtatccactttagtggtgaaggatagggggccgtcttcgaaggagctgaatgtcctacctcaagagggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

307

Amino Acids

33.13

Weight (kDa)

9.4

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 104
AccB1I GGYRCC 1 cut(s) 687
AccI GTMKAC 1 cut(s) 820
AccII CGCG 1 cut(s) 828
AciI CCGC 5 cut(s) 235, 326, 506, 509, 585
AclWI GGATC 3 cut(s) 193, 206, 263
AcuI CTGAAG 3 cut(s) 672, 776, 786
AfaI GTAC 2 cut(s) 388, 456
AfiI CCNNNNNNNGG 6 cut(s) 208, 310, 532, 629, 697, 917
AflIII ACRYGT 1 cut(s) 135
AgsI TTSAA 3 cut(s) 352, 571, 610
AjnI CCWGG 1 cut(s) 336
AleI CACNNNNGTG 2 cut(s) 149, 863
AloI GAACNNNNNNTCC 2 cut(s) 215, 247
AluBI AGCT 5 cut(s) 127, 226, 356, 520, 898
AluI AGCT 5 cut(s) 127, 226, 356, 520, 898
Alw26I GTCTC 2 cut(s) 414, 683
AlwI GGATC 3 cut(s) 193, 206, 263
Ama87I CYCGRG 1 cut(s) 541
AoxI GGCC 2 cut(s) 620, 881
ApeKI GCWGC 2 cut(s) 430, 536
AspLEI GCGC 4 cut(s) 105, 430, 463, 753
AspS9I GGNCC 4 cut(s) 334, 647, 662, 881
AsuC2I CCSGG 2 cut(s) 439, 624
AsuHPI GGTGA 5 cut(s) 91, 112, 271, 325, 880
AsuII TTCGAA 1 cut(s) 890
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 3 cut(s) 334, 647, 662
AxyI CCTNAGG 1 cut(s) 683
BaeGI GKGCMC 1 cut(s) 146
BamHI GGATCC 1 cut(s) 198
BanI GGYRCC 1 cut(s) 687
BanII GRGCYC 3 cut(s) 37, 470, 527
BbsI GAAGAC 1 cut(s) 879
BbvI GCAGC 2 cut(s) 417, 548
BccI CCATC 5 cut(s) 17, 281, 668, 700, 737
BceAI ACGGC 3 cut(s) 331, 461, 868
BciT130I CCWGG 1 cut(s) 338
BciVI GTATCC 1 cut(s) 865
BcnI CCSGG 2 cut(s) 439, 624
BcoDI GTCTC 2 cut(s) 414, 683
BfaI CTAG 4 cut(s) 38, 471, 696, 922
BfmI CTRYAG 1 cut(s) 431
BfoI RGCGCY 3 cut(s) 431, 464, 754
BfuI GTATCC 1 cut(s) 865
BisI GCNGC 3 cut(s) 431, 507, 537
BlpI GCTNAGC 2 cut(s) 521, 772
BlsI GCNGC 3 cut(s) 432, 508, 538
Bme1390I CCNGG 3 cut(s) 338, 439, 624
Bme18I GGWCC 3 cut(s) 334, 647, 662
BmeT110I CYCGRG 1 cut(s) 541
BmgT120I GGNCC 4 cut(s) 334, 647, 662, 881
BmiI GGNNCC 4 cut(s) 48, 200, 689, 882
BmrFI CCNGG 3 cut(s) 338, 439, 624
BmsI GCATC 1 cut(s) 493
BpiI GAAGAC 1 cut(s) 879
BpmI CTGGAG 2 cut(s) 83, 248
Bpu10I CCTNAGC 1 cut(s) 593
Bpu1102I GCTNAGC 2 cut(s) 521, 772
Bpu14I TTCGAA 1 cut(s) 890
BpuEI CTTGAG 3 cut(s) 109, 758, 897
BpuMI CCSGG 2 cut(s) 439, 624
BsaI GGTCTC 1 cut(s) 683
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 359, 389
Bsc4I CCNNNNNNNGG 6 cut(s) 208, 310, 532, 629, 697, 917
Bse118I RCCGGY 1 cut(s) 208
Bse1I ACTGG 3 cut(s) 462, 737, 785
Bse21I CCTNAGG 1 cut(s) 683
Bse3DI GCAATG 1 cut(s) 112
BseBI CCWGG 1 cut(s) 338
BseGI GGATG 1 cut(s) 748
BseLI CCNNNNNNNGG 6 cut(s) 208, 310, 532, 629, 697, 917
BseMI GCAATG 1 cut(s) 112
BseMII CTCAG 2 cut(s) 206, 512
BseNI ACTGG 3 cut(s) 462, 737, 785
BseRI GAGGAG 2 cut(s) 39, 727
BseSI GKGCMC 1 cut(s) 146
BseXI GCAGC 2 cut(s) 417, 548
BseYI CCCAGC 3 cut(s) 123, 463, 587
BsgI GTGCAG 2 cut(s) 38, 131
Bsh1236I CGCG 1 cut(s) 828
BshFI GGCC 2 cut(s) 622, 883
BshNI GGYRCC 1 cut(s) 687
BsiHKCI CYCGRG 1 cut(s) 541
BsiSI CCGG 3 cut(s) 209, 438, 623
BslI CCNNNNNNNGG 6 cut(s) 208, 310, 532, 629, 697, 917
BsmAI GTCTC 2 cut(s) 414, 683
BsmBI CGTCTC 1 cut(s) 414
BsnI GGCC 2 cut(s) 622, 883
Bso31I GGTCTC 1 cut(s) 683
BsoBI CYCGRG 1 cut(s) 541
Bsp119I TTCGAA 1 cut(s) 890
Bsp1286I GDGCHC 4 cut(s) 37, 146, 470, 527
Bsp143I GATC 2 cut(s) 198, 255
Bsp1720I GCTNAGC 2 cut(s) 521, 772
BspACI CCGC 5 cut(s) 235, 326, 506, 509, 585
BspANI GGCC 2 cut(s) 622, 883
BspCNI CTCAG 2 cut(s) 205, 513
BspFNI CGCG 1 cut(s) 828
BspLI GGNNCC 4 cut(s) 48, 200, 689, 882
BspMAI CTGCAG 1 cut(s) 435
BspPI GGATC 3 cut(s) 193, 206, 263
BspT104I TTCGAA 1 cut(s) 890
BspT107I GGYRCC 1 cut(s) 687
BspTNI GGTCTC 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 112
BsrFI RCCGGY 1 cut(s) 208
BsrI ACTGG 3 cut(s) 462, 737, 785
BssAI RCCGGY 1 cut(s) 208
BssMI GATC 2 cut(s) 198, 255
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 2 cut(s) 391, 402
Bst6I CTCTTC 1 cut(s) 720
BstBI TTCGAA 1 cut(s) 890
BstC8I GCNNGC 2 cut(s) 114, 210
BstDEI CTNAG 5 cut(s) 192, 521, 593, 683, 772
BstF5I GGATG 1 cut(s) 748
BstFNI CGCG 1 cut(s) 828
BstH2I RGCGCY 3 cut(s) 431, 464, 754
BstHHI GCGC 4 cut(s) 105, 430, 463, 753
BstKTI GATC 2 cut(s) 201, 258
BstMAI GTCTC 2 cut(s) 414, 683
BstMBI GATC 2 cut(s) 198, 255
BstMWI GCNNNNNNNGC 1 cut(s) 109
BstNI CCWGG 1 cut(s) 338
BstNSI RCATGY 1 cut(s) 139
BstSCI CCNGG 3 cut(s) 336, 437, 622
BstSFI CTRYAG 1 cut(s) 431
BstSLI GKGCMC 1 cut(s) 146
BstUI CGCG 1 cut(s) 828
BstV1I GCAGC 2 cut(s) 417, 548
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 2 cut(s) 198, 255
BstXI CCANNNNNNTGG 1 cut(s) 865
BstYI RGATCY 2 cut(s) 198, 255
Bsu36I CCTNAGG 1 cut(s) 683
BsuI GTATCC 1 cut(s) 865
BsuRI GGCC 2 cut(s) 622, 883
BtsCI GGATG 1 cut(s) 748
BtsIMutI CAGTG 1 cut(s) 396
Cac8I GCNNGC 2 cut(s) 114, 210
CfoI GCGC 4 cut(s) 105, 430, 463, 753
Cfr10I RCCGGY 1 cut(s) 208
Cfr13I GGNCC 4 cut(s) 334, 647, 662, 881
Csp6I GTAC 2 cut(s) 387, 455
CviAII CATG 4 cut(s) 136, 164, 284, 500
CviQI GTAC 2 cut(s) 387, 455
DdeI CTNAG 5 cut(s) 192, 521, 593, 683, 772
DpnI GATC 2 cut(s) 200, 257
DpnII GATC 2 cut(s) 198, 255
Eam1104I CTCTTC 1 cut(s) 720
EarI CTCTTC 1 cut(s) 720
Eco24I GRGCYC 3 cut(s) 37, 470, 527
Eco31I GGTCTC 1 cut(s) 683
Eco47I GGWCC 3 cut(s) 334, 647, 662
Eco57I CTGAAG 3 cut(s) 672, 776, 786
Eco81I CCTNAGG 1 cut(s) 683
Eco88I CYCGRG 1 cut(s) 541
EcoO109I RGGNCCY 1 cut(s) 334
EcoRII CCWGG 1 cut(s) 336
EcoT38I GRGCYC 3 cut(s) 37, 470, 527
Esp3I CGTCTC 1 cut(s) 414
FaeI CATG 4 cut(s) 139, 167, 287, 503
FaiI YATR 9 cut(s) 21, 101, 137, 165, 240, 285, 419, 488, 501
FatI CATG 4 cut(s) 135, 163, 283, 499
FauI CCCGC 1 cut(s) 502
FblI GTMKAC 1 cut(s) 820
Fnu4HI GCNGC 3 cut(s) 431, 507, 537
FokI GGATG 1 cut(s) 755
FriOI GRGCYC 3 cut(s) 37, 470, 527
Fsp4HI GCNGC 3 cut(s) 431, 507, 537
FspBI CTAG 4 cut(s) 38, 471, 696, 922
FspI TGCGCA 1 cut(s) 104
GlaI GCGC 4 cut(s) 104, 429, 462, 752
GluI GCNGC 3 cut(s) 431, 507, 537
GsaI CCCAGC 3 cut(s) 127, 467, 591
GsuI CTGGAG 2 cut(s) 83, 248
HaeII RGCGCY 3 cut(s) 431, 464, 754
HaeIII GGCC 2 cut(s) 622, 883
HapII CCGG 3 cut(s) 209, 438, 623
HhaI GCGC 4 cut(s) 105, 430, 463, 753
Hin1II CATG 4 cut(s) 139, 167, 287, 503
Hin6I GCGC 4 cut(s) 103, 428, 461, 751
HinP1I GCGC 4 cut(s) 103, 428, 461, 751
HincII GTYRAC 3 cut(s) 582, 600, 821
HindII GTYRAC 3 cut(s) 582, 600, 821
HindIII AAGCTT 1 cut(s) 354
HinfI GANTC 2 cut(s) 448, 558
HpaII CCGG 3 cut(s) 209, 438, 623
HphI GGTGA 5 cut(s) 91, 112, 271, 325, 880
Hpy166II GTNNAC 3 cut(s) 582, 600, 821
Hpy188I TCNGA 3 cut(s) 195, 203, 766
Hpy188III TCNNGA 5 cut(s) 62, 471, 660, 722, 914
Hpy8I GTNNAC 3 cut(s) 582, 600, 821
Hpy99I CGWCG 2 cut(s) 406, 409
HpyAV CCTTC 9 cut(s) 148, 175, 310, 358, 647, 761, 808, 865, 886
HpyCH4III ACNGT 2 cut(s) 391, 402
HpyCH4V TGCA 5 cut(s) 55, 112, 175, 433, 481
HpyF10VI GCNNNNNNNGC 1 cut(s) 109
HpyF3I CTNAG 5 cut(s) 192, 521, 593, 683, 772
Hsp92II CATG 4 cut(s) 139, 167, 287, 503
HspAI GCGC 4 cut(s) 103, 428, 461, 751
KroI GCCGGC 1 cut(s) 208
KroNI GCCGGC 1 cut(s) 210
Kzo9I GATC 2 cut(s) 198, 255
LmnI GCTCC 3 cut(s) 52, 223, 895
Lsp1109I GCAGC 2 cut(s) 417, 548
LweI GCATC 1 cut(s) 493
MaeI CTAG 4 cut(s) 38, 471, 696, 922
MaeIII GTNAC 3 cut(s) 79, 299, 787
MalI GATC 2 cut(s) 200, 257
MboI GATC 2 cut(s) 198, 255
MboII GAAGA 4 cut(s) 268, 737, 823, 879
MflI RGATCY 2 cut(s) 198, 255
MhlI GDGCHC 4 cut(s) 37, 146, 470, 527
MluCI AATT 2 cut(s) 565, 572
MmeI TCCRAC 1 cut(s) 619
MroNI GCCGGC 1 cut(s) 208
MseI TTAA 1 cut(s) 575
MslI CAYNNNNRTG 2 cut(s) 149, 863
MspA1I CMGCKG 1 cut(s) 587
MspI CCGG 3 cut(s) 209, 438, 623
MspR9I CCNGG 3 cut(s) 338, 439, 624
MvaI CCWGG 1 cut(s) 338
MvnI CGCG 1 cut(s) 828
MwoI GCNNNNNNNGC 1 cut(s) 109
NaeI GCCGGC 1 cut(s) 210
NciI CCSGG 2 cut(s) 439, 624
NdeII GATC 2 cut(s) 198, 255
NgoMIV GCCGGC 1 cut(s) 208
NlaIII CATG 4 cut(s) 139, 167, 287, 503
NlaIV GGNNCC 4 cut(s) 48, 200, 689, 882
NmuCI GTSAC 3 cut(s) 79, 299, 787
NsbI TGCGCA 1 cut(s) 104
NspI RCATGY 1 cut(s) 139
NspV TTCGAA 1 cut(s) 890
OliI CACNNNNGTG 2 cut(s) 149, 863
PciI ACATGT 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 832
PdiI GCCGGC 1 cut(s) 210
PfeI GAWTC 2 cut(s) 448, 558
PflFI GACNNNGTC 1 cut(s) 439
PkrI GCNGC 3 cut(s) 432, 508, 538
PpuMI RGGWCCY 1 cut(s) 334
PscI ACATGT 1 cut(s) 135
Psp5II RGGWCCY 1 cut(s) 334
Psp6I CCWGG 1 cut(s) 336
PspFI CCCAGC 3 cut(s) 123, 463, 587
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 4 cut(s) 48, 200, 689, 882
PspPI GGNCC 4 cut(s) 334, 647, 662, 881
PspPPI RGGWCCY 1 cut(s) 334
PstI CTGCAG 1 cut(s) 435
PsuI RGATCY 2 cut(s) 198, 255
PsyI GACNNNGTC 1 cut(s) 439
RsaI GTAC 2 cut(s) 388, 456
RsaNI GTAC 2 cut(s) 387, 455
RseI CAYNNNNRTG 2 cut(s) 149, 863
SalI GTCGAC 1 cut(s) 819
SaqAI TTAA 1 cut(s) 575
SatI GCNGC 3 cut(s) 431, 507, 537
Sau3AI GATC 2 cut(s) 198, 255
Sau96I GGNCC 4 cut(s) 334, 647, 662, 881
ScrFI CCNGG 3 cut(s) 338, 439, 624
SduI GDGCHC 4 cut(s) 37, 146, 470, 527
SfaNI GCATC 1 cut(s) 493
SfcI CTRYAG 1 cut(s) 431
SfuI TTCGAA 1 cut(s) 890
SinI GGWCC 3 cut(s) 334, 647, 662
SmiMI CAYNNNNRTG 2 cut(s) 149, 863
SmlI CTYRAG 3 cut(s) 88, 737, 912
SmoI CTYRAG 3 cut(s) 88, 737, 912
Sse9I AATT 2 cut(s) 565, 572
SsiI CCGC 5 cut(s) 235, 326, 506, 509, 585
SspMI CTAG 4 cut(s) 38, 471, 696, 922
StyD4I CCNGG 3 cut(s) 336, 437, 622
TaaI ACNGT 2 cut(s) 391, 402
TaqI TCGA 4 cut(s) 250, 820, 835, 890
TaqII GACCGA 1 cut(s) 318
TasI AATT 2 cut(s) 565, 572
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 2 cut(s) 448, 558
Tru1I TTAA 1 cut(s) 575
Tru9I TTAA 1 cut(s) 575
TscAI CASTG 1 cut(s) 396
TseFI GTSAC 3 cut(s) 79, 299, 787
TseI GCWGC 2 cut(s) 430, 536
Tsp45I GTSAC 3 cut(s) 79, 299, 787
TspDTI ATGAA 1 cut(s) 255
TspRI CASTG 1 cut(s) 396
Tth111I GACNNNGTC 1 cut(s) 439
VpaK11BI GGWCC 3 cut(s) 334, 647, 662
XbaI TCTAGA 1 cut(s) 470
XceI RCATGY 1 cut(s) 139
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XmiI GTMKAC 1 cut(s) 820
XspI CTAG 4 cut(s) 38, 471, 696, 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.