AT3G55090

ATPase activity, coupled to transmembrane movement of substances

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009902
Physical Location & Seq
Reverse (-)
20416183 .. 20418910
2728 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G55090.1

Sequence Viewer

Length: 2211 bp
ATGTCTCGCATACTAGTAGAAGATGATAATGCAACACCGTTTCATTCCATGGAGATTATTAGCTCATCTTTGACTTTAGGCCAACTTCTCAAGAACGTTAGCGACGTTCGTAAGGTTGAAGTTGGTGACGAAACTCCTGTTCATGAATTCTTTGACAGGGATGGTTCTTCACTTGACGGAGATAATGATCATCTTATGCGTCCTGTTCCTTTCGTTCTATCTTTCAACAACCTTACTTACAACGTCTCTGTTCGCCGGAAACTTGACTTTCACGACCTGGTTCCATGGAGGAGGACATCTTTCTCCAAGACCAAGACTCTTCTAGACAATATCTCCGGTGAGACTCGTGACGGAGAGATTCTTGCCGTTCTTGGAGCTAGCGGGTCAGGTAAATCCACTTTGATCGACGCTTTAGCGAATCGGATCGCTAAAGGAAGCTTGAAGGGCACGGTAACGCTTAACGGAGAAGCTCTTCAATCTCGGATGCTGAAAGTTATCTCAGCTTATGTAATGCAAGACGATCTTCTCTTCCCGATGCTTACTGTGGAAGAAACCTTAATGTTTGCAGCTGAGTTTCGATTACCAAGAAGCTTACCTAAATCCAAGAAGAAGCTTCGAGTTCAAGCCCTAATCGACCAGTTAGGGATAAGAAACGCTGCTAAAACAATCATTGGAGACGAAGGACACCGTGGAATCTCCGGTGGAGAAAGAAGGCGAGTTTCGATCGGAATCGATATCATCCACGACCCGATTGTTCTCTTCCTCGACGAACCTACTTCTGGTTTAGATTCCACAAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGAATCGCAGAGAGTGGCAGTATCATTATAATGTCAATACATCAGCCAAGTCACAGAGTTCTCAGTTTACTTGATCGTCTTATCTTCTTGTCACGTGGACACACCGTCTTTAGTGGTTCTCCGGCGAGTCTACCGAGCTTTTTCGCCGGGTTCGGTAATCCGATACCGGAAAACGAGAATCAAACGGAGTTTGCACTCGATCTAATCAGAGAACTCGAAGGATCAGCTGGAGGAACAAGAGGATTAGTTGAATTCAACAAGAAATGGCAAGAGATGAAGAAACAGAGCAATCCTCAAACCCTAACTCCGCCGGCTTCTCCAAACCCAAATTTAACCTTGAAAGAAGCGATTTCCGCCAGCATAAGCAGAGGAAAACTAGTCTCCGGTGGCGGCGGTGGTTCCTCCGTCATAAACCACGGTGGCGGAACCTTAGCCGTCCCTGCATTCGCGAATCCGTTCTGGATCGAAATCAAAACTCTCACCAGACGCTCAATCCTCAACTCCCGACGACAACCGGAGCTACTCGGAATGCGATTAGCCACCGTAATCGTCACCGGATTCATCTTAGCCACCGTATTCTGGCGATTGGATAATTCACCAAAAGGAGTTCAAGAGCGGTTAGGGTTCTTCGCATTCGCAATGTCAACAATGTTCTACACTTGCGCCGATGCTCTTCCCGTGTTCCTCCAGGAACGTTACATCTTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCCTACGTTCTCTCTCACGCCATTGTTACCTTCCCTTCGCTCATCTTCCTCTCTTTAGCTTTCGCAGTGACGACGTTTTGGGCTGTTGGGCTTGAAGGAGGCCTAATGGGCTTTTTATTCTACTGCTTAATCATCTTAGCCTCTTTCTGGTCCGGAAGCTCCTTCGTGACTTTCTTATCCGGCGTCGTTCCACATGTGATGTTAGGCTACACGATCGTTGTTGCTATTTTAGCTTACTTCTTGCTTTTCAGTGGCTTCTTCATCAACAGAGATCGAATCCCTCAGTATTGGATTTGGTTTCATTATCTTTCTCTGGTTAAGTATCCATACGAGGCGGTTCTTCAGAACGAGTTCTCGGATCCTACAGAATGTTTTGTGAGAGGTGTTCAGCTTTTCGACAACTCGCCTTTGGGAGAATTGACGTATGGGATGAAGCTGAGGCTTTTGGATTCTGTGAGCCGGTCGATAGGTATGAGGATATCGAGCTCTACGTGTTTAACGACGGGTGCTGATGTTCTGAAGCAGCAAGGAGTGACACAGCTTAGTAAATGGAACTGCTTGCTTATCACGGTAGGTTTCGGATTCCTATTTAGGATTTTGTTTTACTTGTGTTTGTTGCTTGGGAGCAAAAACAAGAGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001666 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006725 GO:0006810 GO:0006950 GO:0006970 GO:0007034 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009408 GO:0009505 GO:0009531 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009653 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009987 GO:0010033 GO:0010208 GO:0010345 GO:0010927 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022603 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0030312 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0033993 GO:0036293 GO:0036294 GO:0042221 GO:0042493 GO:0042592 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044425 GO:0044426 GO:0044437 GO:0044444 GO:0044446 GO:0044462 GO:0044464 GO:0044550 GO:0045229 GO:0046677 GO:0047484 GO:0048225 GO:0048226 GO:0048229 GO:0048518 GO:0048583 GO:0048584 GO:0048646 GO:0048831 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055078 GO:0055080 GO:0055085 GO:0060688 GO:0065007 GO:0065008 GO:0070013 GO:0070482 GO:0070887 GO:0071214 GO:0071453 GO:0071456 GO:0071470 GO:0071472 GO:0071704 GO:0071840 GO:0071944 GO:0080134 GO:0085029 GO:0097305 GO:0098771 GO:0104004 GO:1900618 GO:1901000 GO:1901002 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1902074 GO:1905428 GO:2000026 GO:2000032
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran

Protein Analysis

736

Amino Acids

81.7

Weight (kDa)

9.26

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 108 - 260 2.6e-26 ABC transporter
ABC2_membrane PF01061 431 - 640 6.1e-51 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 854
AccBSI CCGCTC 1 cut(s) 1441
AccI GTMKAC 1 cut(s) 955
AccII CGCG 1 cut(s) 1274
AccIII TCCGGA 1 cut(s) 1718
AciI CCGC 8 cut(s) 381, 1133, 1179, 1215, 1218, 1248, 1441, 1901
AclI AACGTT 2 cut(s) 96, 1519
AclWI GGATC 6 cut(s) 431, 1054, 1295, 1557, 1919, 1932
AcsI RAATTY 3 cut(s) 146, 1076, 1153
AcuI CTGAAG 2 cut(s) 1892, 2105
AcvI CACGTG 1 cut(s) 920
AcyI GRCGYC 1 cut(s) 1749
AfiI CCNNNNNNNGG 3 cut(s) 779, 1404, 1713
AflIII ACRYGT 2 cut(s) 1759, 2057
AhdI GACNNNNNGTC 1 cut(s) 929
AhlI ACTAGT 2 cut(s) 13, 1201
AjnI CCWGG 2 cut(s) 276, 1512
Alw21I GWGCWC 1 cut(s) 2054
Alw26I GTCTC 5 cut(s) 9, 250, 335, 669, 1210
AlwI GGATC 6 cut(s) 431, 1054, 1295, 1557, 1919, 1932
Aor13HI TCCGGA 1 cut(s) 1718
AoxI GGCC 2 cut(s) 79, 1666
ApeKI GCWGC 3 cut(s) 566, 656, 2089
ApoI RAATTY 3 cut(s) 146, 1076, 1153
Asp700I GAANNNNTTC 3 cut(s) 471, 1280, 1916
AspLEI GCGC 1 cut(s) 1490
AspS9I GGNCC 1 cut(s) 1716
AsuC2I CCSGG 1 cut(s) 973
AsuHPI GGTGA 5 cut(s) 137, 350, 1297, 1369, 1413
AsuNHI GCTAGC 1 cut(s) 377
AvaII GGWCC 1 cut(s) 1716
BaeGI GKGCMC 1 cut(s) 449
BamHI GGATCC 1 cut(s) 1924
BanII GRGCYC 1 cut(s) 2054
BauI CACGAG 1 cut(s) 345
BbrPI CACGTG 1 cut(s) 920
Bbv12I GWGCWC 1 cut(s) 2054
BbvCI CCTCAGC 1 cut(s) 2003
BbvI GCAGC 3 cut(s) 578, 643, 2101
BccI CCATC 1 cut(s) 155
BceAI ACGGC 2 cut(s) 350, 1244
BciT130I CCWGG 2 cut(s) 278, 1514
BciVI GTATCC 1 cut(s) 1899
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 1 cut(s) 973
BcoDI GTCTC 5 cut(s) 9, 250, 335, 669, 1210
BcuI ACTAGT 2 cut(s) 13, 1201
BfaI CTAG 4 cut(s) 14, 323, 378, 1202
BfmI CTRYAG 1 cut(s) 1929
BfuI GTATCC 1 cut(s) 1899
BglI GCCNNNNNGGC 1 cut(s) 1674
BisI GCNGC 4 cut(s) 567, 657, 1216, 2090
BlsI GCNGC 4 cut(s) 568, 658, 1217, 2091
Bme1390I CCNGG 3 cut(s) 278, 973, 1514
Bme18I GGWCC 1 cut(s) 1716
BmeRI GACNNNNNGTC 1 cut(s) 929
BmgT120I GGNCC 1 cut(s) 1716
BmiI GGNNCC 4 cut(s) 282, 1225, 1252, 1926
BmrFI CCNGG 3 cut(s) 278, 973, 1514
BmsI GCATC 3 cut(s) 474, 525, 1483
BmtI GCTAGC 1 cut(s) 381
BplI GAGNNNNNCTC 2 cut(s) 1102, 1134
BpmI CTGGAG 2 cut(s) 1074, 1496
Bpu10I CCTNAGC 2 cut(s) 1255, 2003
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 973
Bsa29I ATCGAT 1 cut(s) 732
BsaAI YACGTR 2 cut(s) 920, 2058
BsaBI GATNNNNATC 3 cut(s) 186, 728, 1292
BsaHI GRCGYC 1 cut(s) 1749
BsaJI CCNNGG 4 cut(s) 48, 284, 688, 1240
BsaWI WCCGGW 8 cut(s) 335, 698, 991, 1208, 1339, 1379, 1557, 1718
BsaXI ACNNNNNCTCC 4 cut(s) 317, 347, 1114, 1144
Bsc4I CCNNNNNNNGG 3 cut(s) 779, 1404, 1713
Bse118I RCCGGY 2 cut(s) 1135, 2025
Bse1I ACTGG 1 cut(s) 637
Bse3DI GCAATG 1 cut(s) 1470
Bse8I GATNNNNATC 3 cut(s) 186, 728, 1292
BseAI TCCGGA 1 cut(s) 1718
BseBI CCWGG 2 cut(s) 278, 1514
BseCI ATCGAT 1 cut(s) 732
BseDI CCNNGG 4 cut(s) 48, 284, 688, 1240
BseGI GGATG 4 cut(s) 166, 489, 738, 2001
BseJI GATNNNNATC 3 cut(s) 186, 728, 1292
BseLI CCNNNNNNNGG 3 cut(s) 779, 1404, 1713
BseMI GCAATG 1 cut(s) 1470
BseMII CTCAG 5 cut(s) 513, 561, 901, 1862, 1994
BseNI ACTGG 1 cut(s) 637
BseRI GAGGAG 1 cut(s) 304
BseSI GKGCMC 1 cut(s) 449
BseXI GCAGC 3 cut(s) 578, 643, 2101
Bsh1236I CGCG 1 cut(s) 1274
Bsh1285I CGRYCG 3 cut(s) 726, 1782, 2030
BshFI GGCC 2 cut(s) 81, 1668
BshVI ATCGAT 1 cut(s) 732
BsiEI CGRYCG 3 cut(s) 726, 1782, 2030
BsiHKAI GWGCWC 1 cut(s) 2054
BslFI GGGAC 1 cut(s) 1247
BslI CCNNNNNNNGG 3 cut(s) 779, 1404, 1713
BsmAI GTCTC 5 cut(s) 9, 250, 335, 669, 1210
BsmBI CGTCTC 2 cut(s) 250, 669
BsmFI GGGAC 1 cut(s) 1247
BsmI GAATGC 3 cut(s) 1268, 1359, 1457
BsnI GGCC 2 cut(s) 81, 1668
Bsp1286I GDGCHC 2 cut(s) 449, 2054
Bsp13I TCCGGA 1 cut(s) 1718
Bsp19I CCATGG 2 cut(s) 48, 284
Bsp68I TCGCGA 1 cut(s) 1274
BspACI CCGC 8 cut(s) 381, 1133, 1179, 1215, 1218, 1248, 1441, 1901
BspANI GGCC 2 cut(s) 81, 1668
BspCNI CTCAG 5 cut(s) 512, 562, 900, 1861, 1995
BspDI ATCGAT 1 cut(s) 732
BspEI TCCGGA 1 cut(s) 1718
BspFNI CGCG 1 cut(s) 1274
BspHI TCATGA 2 cut(s) 142, 1530
BspLI GGNNCC 4 cut(s) 282, 1225, 1252, 1926
BspOI GCTAGC 1 cut(s) 381
BspPI GGATC 6 cut(s) 431, 1054, 1295, 1557, 1919, 1932
BspQI GCTCTTC 2 cut(s) 477, 1503
BsrBI CCGCTC 1 cut(s) 1441
BsrDI GCAATG 1 cut(s) 1470
BsrFI RCCGGY 2 cut(s) 1135, 2025
BsrI ACTGG 1 cut(s) 637
BssAI RCCGGY 2 cut(s) 1135, 2025
BssECI CCNNGG 4 cut(s) 48, 284, 688, 1240
BssNI GRCGYC 1 cut(s) 1749
BssSI CACGAG 1 cut(s) 345
BssT1I CCWWGG 2 cut(s) 48, 284
Bst2BI CACGAG 1 cut(s) 345
Bst2UI CCWGG 2 cut(s) 278, 1514
Bst4CI ACNGT 9 cut(s) 39, 451, 544, 689, 931, 1244, 1369, 1399, 2137
Bst6I CTCTTC 6 cut(s) 324, 477, 533, 764, 818, 1503
BstACI GRCGYC 1 cut(s) 1749
BstBAI YACGTR 2 cut(s) 920, 2058
BstC8I GCNNGC 4 cut(s) 379, 1137, 1183, 2126
BstDEI CTNAG 9 cut(s) 499, 570, 887, 1255, 1390, 1702, 1848, 2003, 2108
BstDSI CCRYGG 4 cut(s) 48, 284, 688, 1240
BstF5I GGATG 4 cut(s) 166, 489, 738, 2001
BstFNI CGCG 1 cut(s) 1274
BstHHI GCGC 1 cut(s) 1490
BstMAI GTCTC 5 cut(s) 9, 250, 335, 669, 1210
BstMCI CGRYCG 3 cut(s) 726, 1782, 2030
BstMWI GCNNNNNNNGC 6 cut(s) 444, 1178, 1265, 1550, 1674, 1796
BstNI CCWGG 2 cut(s) 278, 1514
BstNSI RCATGY 1 cut(s) 1763
BstSCI CCNGG 3 cut(s) 276, 971, 1512
BstSFI CTRYAG 1 cut(s) 1929
BstSLI GKGCMC 1 cut(s) 449
BstUI CGCG 1 cut(s) 1274
BstV1I GCAGC 3 cut(s) 578, 643, 2101
BstX2I RGATCY 2 cut(s) 1562, 1924
BstYI RGATCY 2 cut(s) 1562, 1924
Bsu15I ATCGAT 1 cut(s) 732
BsuI GTATCC 1 cut(s) 1899
BsuRI GGCC 2 cut(s) 81, 1668
BsuTUI ATCGAT 1 cut(s) 732
BtgI CCRYGG 4 cut(s) 48, 284, 688, 1240
BtsCI GGATG 4 cut(s) 166, 489, 738, 2001
BtsI GCAGTG 1 cut(s) 1638
BtsIMutI CAGTG 2 cut(s) 1638, 1822
BtuMI TCGCGA 1 cut(s) 1274
Cac8I GCNNGC 4 cut(s) 379, 1137, 1183, 2126
CciI TCATGA 2 cut(s) 142, 1530
CfoI GCGC 1 cut(s) 1490
Cfr10I RCCGGY 2 cut(s) 1135, 2025
Cfr13I GGNCC 1 cut(s) 1716
ClaI ATCGAT 1 cut(s) 732
CseI GACGC 4 cut(s) 188, 416, 1320, 1738
CsiI ACCWGGT 1 cut(s) 276
CviAII CATG 6 cut(s) 49, 143, 285, 805, 1531, 1760
DdeI CTNAG 9 cut(s) 499, 570, 887, 1255, 1390, 1702, 1848, 2003, 2108
DriI GACNNNNNGTC 1 cut(s) 929
Eam1104I CTCTTC 6 cut(s) 324, 477, 533, 764, 818, 1503
Eam1105I GACNNNNNGTC 1 cut(s) 929
EarI CTCTTC 6 cut(s) 324, 477, 533, 764, 818, 1503
EciI GGCGGA 3 cut(s) 1122, 1168, 1263
Ecl136II GAGCTC 1 cut(s) 2052
Eco130I CCWWGG 2 cut(s) 48, 284
Eco147I AGGCCT 1 cut(s) 1668
Eco24I GRGCYC 1 cut(s) 2054
Eco32I GATATC 2 cut(s) 736, 2046
Eco47I GGWCC 1 cut(s) 1716
Eco53kI GAGCTC 1 cut(s) 2052
Eco57I CTGAAG 2 cut(s) 1892, 2105
Eco72I CACGTG 1 cut(s) 920
EcoICRI GAGCTC 1 cut(s) 2052
EcoRI GAATTC 2 cut(s) 146, 1076
EcoRII CCWGG 2 cut(s) 276, 1512
EcoRV GATATC 2 cut(s) 736, 2046
EcoT14I CCWWGG 2 cut(s) 48, 284
EcoT38I GRGCYC 1 cut(s) 2054
ErhI CCWWGG 2 cut(s) 48, 284
Esp3I CGTCTC 2 cut(s) 250, 669
FaeI CATG 6 cut(s) 52, 146, 288, 808, 1534, 1763
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 1 cut(s) 1247
FatI CATG 6 cut(s) 48, 142, 284, 804, 1530, 1759
FauI CCCGC 1 cut(s) 374
FbaI TGATCA 1 cut(s) 187
FblI GTMKAC 1 cut(s) 955
Fnu4HI GCNGC 4 cut(s) 567, 657, 1216, 2090
FokI GGATG 4 cut(s) 173, 496, 725, 2008
FriOI GRGCYC 1 cut(s) 2054
Fsp4HI GCNGC 4 cut(s) 567, 657, 1216, 2090
FspBI CTAG 4 cut(s) 14, 323, 378, 1202
GlaI GCGC 1 cut(s) 1489
GluI GCNGC 4 cut(s) 567, 657, 1216, 2090
GsuI CTGGAG 2 cut(s) 1074, 1496
HaeIII GGCC 2 cut(s) 81, 1668
HgaI GACGC 4 cut(s) 188, 416, 1320, 1738
HhaI GCGC 1 cut(s) 1490
Hin1I GRCGYC 1 cut(s) 1749
Hin1II CATG 6 cut(s) 52, 146, 288, 808, 1534, 1763
Hin6I GCGC 1 cut(s) 1488
HinP1I GCGC 1 cut(s) 1488
HincII GTYRAC 1 cut(s) 1470
HindII GTYRAC 1 cut(s) 1470
HindIII AAGCTT 3 cut(s) 436, 589, 611
HphI GGTGA 5 cut(s) 137, 350, 1297, 1369, 1413
Hpy166II GTNNAC 4 cut(s) 893, 923, 956, 1470
Hpy8I GTNNAC 4 cut(s) 893, 923, 956, 1470
Hpy99I CGWCG 7 cut(s) 107, 410, 770, 1335, 1642, 1754, 2071
HpyAV CCTTC 8 cut(s) 436, 674, 705, 1037, 1606, 1611, 1655, 1738
HpyCH4III ACNGT 9 cut(s) 39, 451, 544, 689, 931, 1244, 1369, 1399, 2137
HpyCH4IV ACGT 9 cut(s) 96, 105, 243, 919, 1519, 1572, 1640, 1988, 2057
HpyCH4V TGCA 5 cut(s) 32, 514, 566, 1019, 1268
HpyF10VI GCNNNNNNNGC 6 cut(s) 444, 1178, 1265, 1550, 1674, 1796
HpyF3I CTNAG 9 cut(s) 499, 570, 887, 1255, 1390, 1702, 1848, 2003, 2108
HpySE526I ACGT 9 cut(s) 96, 105, 243, 919, 1519, 1572, 1640, 1988, 2057
Hsp92I GRCGYC 1 cut(s) 1749
Hsp92II CATG 6 cut(s) 52, 146, 288, 808, 1534, 1763
HspAI GCGC 1 cut(s) 1488
Kpn2I TCCGGA 1 cut(s) 1718
KroI GCCGGC 1 cut(s) 1135
KroNI GCCGGC 1 cut(s) 1137
Ksp22I TGATCA 1 cut(s) 187
LguI GCTCTTC 2 cut(s) 477, 1503
LmnI GCTCC 4 cut(s) 374, 1342, 1730, 2190
Lsp1109I GCAGC 3 cut(s) 578, 643, 2101
LweI GCATC 3 cut(s) 474, 525, 1483
MabI ACCWGGT 1 cut(s) 276
MaeI CTAG 4 cut(s) 14, 323, 378, 1202
MaeII ACGT 9 cut(s) 96, 105, 243, 919, 1519, 1572, 1640, 1988, 2057
MbiI CCGCTC 1 cut(s) 1441
MflI RGATCY 2 cut(s) 1562, 1924
MhlI GDGCHC 2 cut(s) 449, 2054
MluCI AATT 5 cut(s) 146, 1076, 1153, 1417, 1982
MlyI GAGTC 3 cut(s) 310, 337, 961
MroI TCCGGA 1 cut(s) 1718
MroNI GCCGGC 1 cut(s) 1135
MroXI GAANNNNTTC 3 cut(s) 471, 1280, 1916
MseI TTAA 7 cut(s) 459, 557, 813, 1157, 1694, 1884, 2063
MslI CAYNNNNRTG 2 cut(s) 854, 1529
MspA1I CMGCKG 2 cut(s) 569, 1052
MspR9I CCNGG 3 cut(s) 278, 973, 1514
Mva1269I GAATGC 3 cut(s) 1268, 1359, 1457
MvaI CCWGG 2 cut(s) 278, 1514
MvnI CGCG 1 cut(s) 1274
MwoI GCNNNNNNNGC 6 cut(s) 444, 1178, 1265, 1550, 1674, 1796
NaeI GCCGGC 1 cut(s) 1137
NciI CCSGG 1 cut(s) 973
NcoI CCATGG 2 cut(s) 48, 284
NgoMIV GCCGGC 1 cut(s) 1135
NheI GCTAGC 1 cut(s) 377
NlaIII CATG 6 cut(s) 52, 146, 288, 808, 1534, 1763
NlaIV GGNNCC 4 cut(s) 282, 1225, 1252, 1926
NmuCI GTSAC 8 cut(s) 125, 347, 875, 915, 1375, 1633, 1732, 2098
NruI TCGCGA 1 cut(s) 1274
NspI RCATGY 1 cut(s) 1763
PagI TCATGA 2 cut(s) 142, 1530
PceI AGGCCT 1 cut(s) 1668
PciI ACATGT 1 cut(s) 1759
PciSI GCTCTTC 2 cut(s) 477, 1503
PcsI WCGNNNNNNNCGW 3 cut(s) 102, 2054, 2063
PctI GAATGC 3 cut(s) 1268, 1359, 1457
PdiI GCCGGC 1 cut(s) 1137
PdmI GAANNNNTTC 3 cut(s) 471, 1280, 1916
PfoI TCCNGGA 1 cut(s) 1512
PkrI GCNGC 4 cut(s) 568, 658, 1217, 2091
Ple19I CGATCG 2 cut(s) 726, 1782
PleI GAGTC 3 cut(s) 310, 337, 960
PmaCI CACGTG 1 cut(s) 920
PmlI CACGTG 1 cut(s) 920
PpsI GAGTC 3 cut(s) 310, 337, 960
Ppu21I YACGTR 2 cut(s) 920, 2058
PscI ACATGT 1 cut(s) 1759
PsiI TTATAA 1 cut(s) 854
Psp124BI GAGCTC 1 cut(s) 2054
Psp1406I AACGTT 2 cut(s) 96, 1519
Psp6I CCWGG 2 cut(s) 276, 1512
PspCI CACGTG 1 cut(s) 920
PspGI CCWGG 2 cut(s) 276, 1512
PspN4I GGNNCC 4 cut(s) 282, 1225, 1252, 1926
PspPI GGNCC 1 cut(s) 1716
PsuI RGATCY 2 cut(s) 1562, 1924
PvuI CGATCG 2 cut(s) 726, 1782
PvuII CAGCTG 2 cut(s) 569, 1052
RruI TCGCGA 1 cut(s) 1274
RseI CAYNNNNRTG 2 cut(s) 854, 1529
SacI GAGCTC 1 cut(s) 2054
SapI GCTCTTC 2 cut(s) 477, 1503
SaqAI TTAA 7 cut(s) 459, 557, 813, 1157, 1694, 1884, 2063
SatI GCNGC 4 cut(s) 567, 657, 1216, 2090
Sau96I GGNCC 1 cut(s) 1716
SchI GAGTC 3 cut(s) 310, 337, 961
ScrFI CCNGG 3 cut(s) 278, 973, 1514
SduI GDGCHC 2 cut(s) 449, 2054
SexAI ACCWGGT 1 cut(s) 276
SfaNI GCATC 3 cut(s) 474, 525, 1483
SfcI CTRYAG 1 cut(s) 1929
SinI GGWCC 1 cut(s) 1716
SmiMI CAYNNNNRTG 2 cut(s) 854, 1529
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SpeI ACTAGT 2 cut(s) 13, 1201
Sse9I AATT 5 cut(s) 146, 1076, 1153, 1417, 1982
SseBI AGGCCT 1 cut(s) 1668
SsiI CCGC 8 cut(s) 381, 1133, 1179, 1215, 1218, 1248, 1441, 1901
SspMI CTAG 4 cut(s) 14, 323, 378, 1202
SstI GAGCTC 1 cut(s) 2054
StuI AGGCCT 1 cut(s) 1668
StyD4I CCNGG 3 cut(s) 276, 971, 1512
StyI CCWWGG 2 cut(s) 48, 284
TaaI ACNGT 9 cut(s) 39, 451, 544, 689, 931, 1244, 1369, 1399, 2137
TaiI ACGT 9 cut(s) 99, 108, 246, 922, 1522, 1575, 1643, 1991, 2060
TasI AATT 5 cut(s) 146, 1076, 1153, 1417, 1982
TauI GCSGC 1 cut(s) 1218
Tru1I TTAA 7 cut(s) 459, 557, 813, 1157, 1694, 1884, 2063
Tru9I TTAA 7 cut(s) 459, 557, 813, 1157, 1694, 1884, 2063
TscAI CASTG 2 cut(s) 1638, 1822
TseFI GTSAC 8 cut(s) 125, 347, 875, 915, 1375, 1633, 1732, 2098
TseI GCWGC 3 cut(s) 566, 656, 2089
Tsp45I GTSAC 8 cut(s) 125, 347, 875, 915, 1375, 1633, 1732, 2098
TspGWI ACGGA 6 cut(s) 192, 366, 477, 1025, 1219, 1269
TspRI CASTG 2 cut(s) 1638, 1822
VpaK11BI GGWCC 1 cut(s) 1716
XapI RAATTY 3 cut(s) 146, 1076, 1153
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 1 cut(s) 1763
XmiI GTMKAC 1 cut(s) 955
XmnI GAANNNNTTC 3 cut(s) 471, 1280, 1916
XspI CTAG 4 cut(s) 14, 323, 378, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.