Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0009902

Physical Location & Seq

Genomic Coordinates Reverse (-)

56760048 .. 56762291

Gene Structure 2244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G029110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGTCTCGGGTAGCAGCAGAGAATCAGATATCGCCGTTTTTCTCTATGGAGCTCGACGAATTCCCACGCGCCTCCCACGGCGCGTCACCCTCACTCGGCCAGCTTCTGAAGCACGTCGGAGATGTCCGTAAGGAGGCCACCGGCGACGGCGGCGAGACTCCCATGCATCACCACCAGGTGCTCGACATGAGCGACGAGACTCTTGAAAACCCTAGGTCGCTTCCGTTCGTGCTCTCGTTCACTAATCTGACTTACAGCGTCAAGATTCGCCGGAAGTTCAGTCTTTCGGGATGGGAGAGCCTGTTCACGAGGACCAAGACGCTGCTGAACGACATCTCCGGCGAGGCTAGGGAAGGAGAAGTGCTGGCGGTGCTCGGCGCGAGCGGTTCCGGCAAGTCGACTCTCATCGACGCCTTGGCCAATCGCATCGCCAAGGGAAGCCTGAAAGGAAAGGTCTGCCTCAACGGCGAGGTCCTGGAGTCGCGGCTGCTCAAAGTGATCTCAGCTTACGTCATGCAGGACGACCTGCTATTCCCGATGCTGACGGTGGAGGAGACGCTCATGTTCGCCGCCGAGTTCCGCCTCCCTAGGGCGCTCTCGAAATCCAAGAAGAAAATGCGGGTCCAGGCGCTGATAGACCAGCTCGGCCTCCGCAACGCGGCCAAGCGCCGCCGCGTCTCGATCGGAATAGACATCGTCCACGACCCGATCATCCTGTTCCTCGACGAGCCGACCTCCGGCCTCGACTCCACCTCCGCCTTCATGGTCGTCAAGGTCCTCCAGCGGATCGCTCAGTCCGGCAGCATTGTGGTCTTGTCCGTACACCAGCCGAGCTACAGAATCTTGGGCCTGCTGGACCGCCTCCTCTTCCTCAGCCGCGGCCAAACCGTTTTCAGCGGCTCGCCAGCTCAGCTTCCCTCCTACTTCGCCGAGTTCGGGAGGCCCATACCCGACTCCGAAAACAAAACCGAGTTCGCTCTGGACCTGATCCGAGAACTGGAAGGCTCCCCCGGCGGGACCCAATCCCTCGTCGAGTTCAACAACTCCTGGCAGACCATGAAGCACAGCGATCACTACCGCTCCGCCACCGACACACGACACGTCGTTCCCCTCCAAGAAGCCATCTCCGCCAGCATTTCCCGCGGCAAGCTGGTCTCCGGCTCCACCAACAACGACGCCAGCCCCAACTCCATGGTCCCCACCTTCGCCAACCCCATCTGGATCGAAATGGCCGTCCTGGCGAGACGCTCCATGAAAAACTCGAGACGAATGCCGGAGCTGTTCGGAATCCGGCTGGGCGCAGTGGTGGTCACCGGGTTCATCCTGGCCACCATGTTCTGGAATCTCGATAATACCCCTAAGGGAGTCCAAGAACGCCTCGGGTTCATCGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCCGACGCCTTACCCGTCTTCCTCCAAGAACGCTACATCTTCATGAGAGAGACCGCCTACAATGCCTACCGTAGATCTTCCTACGTTCTTTCACACTCTCTAGTGGCTCTTCCGGCGCTGGTTTTCCTCTCCGCCGCGTTCTCCGCCATCACATTCTGGGCAGTGGGCCTCGACGGCGGGCTCACGGGGTTCCTATTCTACTTCCTCATCATCTTGGCCTCGTTCTGGGCCGGAAGCTCATTCGTCACATTCCTCTCCGGCGTCGTCCCCCACGTCATGCTCGGGTACACTATAGTCGTGGCAATCTTAGCCTACTTCCTTCTCTTCAGTGGCTTCTTCATAAACCGTAATAGAATCCCGGACTACTGGATTTGGTTCCACTACATGTCACTAGTGAAGTACCCGTACGAGGCTGTAATGCAGAACGAGTTTCAGGACCCGACTAAGTGCTTCGTGAGGGGTGTACAGATATTTGATAATACTCCGCTGGCTTCGGTCCCCGCGGCGCTGAAGGTGAAGCTTCTGGGCAGCATGAGCGAGACGCTGGGGATGACGATTACGAGGACGACTTGCTTAACGACTGGGAGTGATTTATTGAAGCAGCAGGGAGTGACTCAGCTGAGCAAGTGGAATTGCTTGTGGATCACTGTGGCGTGGGGGTTTCTGTTCAGGATTCTCTTCTATTTTTCGTTGCTGATTGGGAGCAAGAACAAGAGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043207 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

714

Amino Acids

79.56

Weight (kDa)

9.34

Isoelectric Point (pI)

42.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	109 - 246	4.7e-17	ABC transporter
ABC2_membrane_7	PF19055	275 - 369	2.3e-06	ABC-2 type transporter
ABC2_membrane	PF01061	411 - 618	1.2e-48	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39350 AT3G55090 AT5G13580
fragaria_vesca	FvH4_7g20800
malus_domestica	MD01G1117400.v1.1 MD07G1184900.v1.1
prunus_persica	Prupe.2G224800_v2.0.a1
pyrus_communis	pycom01g14510 pycom07g17710
rosa_chinensis	RchiOBHm_Chr1g0365031
rosa_laevigata	RLG00000027449
rosa_multiflora	Rmu_co8341207.1_g000001 Rmu_ssc0000112.1_g000014
rosa_roxburghii	Rroxscaffold_4G00291530 Rroxscaffold_4G00291980
rosa_rugosa	Rorug01G0319000
rosa_samantha	Rh1AG328100 Rh1BG289500 Rh1CG306100 Rh1DG320900
rosa_wichuraiana	Rw1G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1427
Acc36I	ACCTGC	2 cut(s)	534, 1427
AccB7I	CCANNNNNTGG	1 cut(s)	1338
AccBSI	CCGCTC	2 cut(s)	384, 1080
AccI	GTMKAC	1 cut(s)	398
AclWI	GGATC	4 cut(s)	794, 982, 1229, 2072
AcoI	YGGCCR	6 cut(s)	97, 417, 660, 880, 1230, 1326
AcsI	RAATTY	1 cut(s)	59
AcuI	CTGAAG	3 cut(s)	128, 1732, 1952
AcyI	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
AdeI	CACNNNGTG	1 cut(s)	178
AfaI	GTAC	5 cut(s)	822, 1709, 1823, 1829, 1887
AflIII	ACRYGT	2 cut(s)	1099, 1806
AgsI	TTSAA	3 cut(s)	206, 1039, 2020
AhlI	ACTAGT	1 cut(s)	1813
AjiI	CACGTC	3 cut(s)	115, 1102, 1696
AjnI	CCWGG	6 cut(s)	174, 474, 624, 1046, 1236, 1323
AloI	GAACNNNNNNTCC	4 cut(s)	287, 319, 320, 352
Alw21I	GWGCWC	4 cut(s)	54, 183, 234, 375
AlwI	GGATC	4 cut(s)	794, 982, 1229, 2072
AlwNI	CAGNNNCTG	2 cut(s)	106, 631
Ama87I	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
ApeKI	GCWGC	6 cut(s)	14, 322, 487, 801, 1950, 2023
ApoI	RAATTY	1 cut(s)	59
ArsI	GACNNNNNNTTYG	2 cut(s)	1218, 1250
AspA2I	CCTAGG	2 cut(s)	212, 587
AsuC2I	CCSGG	3 cut(s)	1011, 1315, 1781
AsuHPI	GGTGA	4 cut(s)	78, 161, 1303, 1948
AvaI	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
AvrII	CCTAGG	2 cut(s)	212, 587
AxyI	CCTNAGG	1 cut(s)	1359
BalI	TGGCCA	2 cut(s)	419, 1328
BanII	GRGCYC	2 cut(s)	54, 1605
BarI	GAAGNNNNNNTAC	2 cut(s)	1811, 1843
BauI	CACGAG	1 cut(s)	307
BbsI	GAAGAC	1 cut(s)	1432
Bbv12I	GWGCWC	4 cut(s)	54, 183, 234, 375
BbvCI	CCTCAGC	1 cut(s)	872
BbvI	GCAGC	6 cut(s)	26, 309, 474, 813, 1962, 2035
BccI	CCATC	4 cut(s)	285, 1130, 1223, 1577
BceAI	ACGGC	6 cut(s)	19, 94, 163, 481, 1217, 1612
BcgI	CGANNNNNNTGC	2 cut(s)	1252, 1286
BciT130I	CCWGG	6 cut(s)	176, 476, 626, 1048, 1238, 1325
BcnI	CCSGG	3 cut(s)	1011, 1315, 1781
BcuI	ACTAGT	1 cut(s)	1813
BfaI	CTAG	5 cut(s)	213, 348, 588, 1523, 1814
BfmI	CTRYAG	2 cut(s)	835, 1713
BfoI	RGCGCY	5 cut(s)	596, 632, 670, 1541, 1931
BfuAI	ACCTGC	2 cut(s)	534, 1427
BglI	GCCNNNNNGGC	3 cut(s)	465, 1238, 1596
BglII	AGATCT	1 cut(s)	1496
BlnI	CCTAGG	2 cut(s)	212, 587
BlpI	GCTNAGC	2 cut(s)	909, 2042
Bme1390I	CCNGG	9 cut(s)	176, 476, 626, 1011, 1048, 1238, 1315, 1325, 1781
BmeT110I	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
BmgBI	CACGTC	3 cut(s)	115, 1102, 1696
BmrFI	CCNGG	9 cut(s)	176, 476, 626, 1011, 1048, 1238, 1315, 1325, 1781
BmrI	ACTGGG	1 cut(s)	2013
BmsI	GCATC	3 cut(s)	175, 435, 528
BmuI	ACTGGG	1 cut(s)	2013
BpiI	GAAGAC	1 cut(s)	1432
BplI	GAGNNNNNCTC	2 cut(s)	719, 751
BpmI	CTGGAG	2 cut(s)	497, 764
Bpu10I	CCTNAGC	1 cut(s)	872
Bpu1102I	GCTNAGC	2 cut(s)	909, 2042
BpuMI	CCSGG	3 cut(s)	1011, 1315, 1781
BsaHI	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
BsaI	GGTCTC	2 cut(s)	1159, 1466
BsaXI	ACNNNNNCTCC	8 cut(s)	287, 317, 320, 350, 737, 767, 1064, 1094
Bse118I	RCCGGY	1 cut(s)	140
Bse1I	ACTGG	3 cut(s)	1002, 1793, 2008
Bse21I	CCTNAGG	1 cut(s)	1359
BseBI	CCWGG	6 cut(s)	176, 476, 626, 1048, 1238, 1325
BseGI	GGATG	4 cut(s)	296, 711, 1320, 1977
BseMII	CTCAG	6 cut(s)	516, 806, 886, 923, 2033, 2051
BseNI	ACTGG	3 cut(s)	1002, 1793, 2008
BseRI	GAGGAG	2 cut(s)	566, 854
BseXI	GCAGC	6 cut(s)	26, 309, 474, 813, 1962, 2035
BseYI	CCCAGC	2 cut(s)	1294, 1966
Bsh1285I	CGRYCG	1 cut(s)	684
BsiEI	CGRYCG	1 cut(s)	684
BsiHKAI	GWGCWC	4 cut(s)	54, 183, 234, 375
BsiHKCI	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
BsiWI	CGTACG	1 cut(s)	1827
BslFI	GGGAC	4 cut(s)	1030, 1181, 1673, 1904
BsmBI	CGTCTC	5 cut(s)	548, 682, 1237, 1258, 1955
BsmFI	GGGAC	4 cut(s)	1030, 1181, 1673, 1904
BsmI	GAATGC	1 cut(s)	1275
Bso31I	GGTCTC	2 cut(s)	1159, 1466
BsoBI	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
Bsp1286I	GDGCHC	5 cut(s)	54, 183, 234, 375, 1605
Bsp1407I	TGTACA	1 cut(s)	1885
Bsp143I	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
Bsp1720I	GCTNAGC	2 cut(s)	909, 2042
Bsp19I	CCATGG	1 cut(s)	1191
BspCNI	CTCAG	6 cut(s)	515, 805, 885, 922, 2034, 2050
BspHI	TCATGA	1 cut(s)	1464
BspMI	ACCTGC	2 cut(s)	534, 1427
BspPI	GGATC	4 cut(s)	794, 982, 1229, 2072
BspQI	GCTCTTC	1 cut(s)	1536
BspTNI	GGTCTC	2 cut(s)	1159, 1466
BsrBI	CCGCTC	2 cut(s)	384, 1080
BsrFI	RCCGGY	1 cut(s)	140
BsrGI	TGTACA	1 cut(s)	1885
BsrI	ACTGG	3 cut(s)	1002, 1793, 2008
BssAI	RCCGGY	1 cut(s)	140
BssMI	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
BssNI	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
BssSI	CACGAG	1 cut(s)	307
BssT1I	CCWWGG	5 cut(s)	212, 414, 432, 587, 1191
Bst2BI	CACGAG	1 cut(s)	307
Bst2UI	CCWGG	6 cut(s)	176, 476, 626, 1048, 1238, 1325
Bst4CI	ACNGT	5 cut(s)	547, 889, 1493, 1769, 2071
Bst6I	CTCTTC	4 cut(s)	872, 1536, 1751, 2105
BstACI	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
BstAUI	TGTACA	1 cut(s)	1885
BstDEI	CTNAG	9 cut(s)	502, 792, 872, 909, 1359, 1729, 1866, 2037, 2042
BstDSI	CCRYGG	5 cut(s)	76, 877, 1141, 1191, 1923
BstEII	GGTNACC	1 cut(s)	1309
BstF5I	GGATG	4 cut(s)	296, 711, 1320, 1977
BstH2I	RGCGCY	5 cut(s)	596, 632, 670, 1541, 1931
BstKTI	GATC	9 cut(s)	501, 684, 711, 789, 990, 1072, 1224, 1499, 2067
BstMBI	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
BstMCI	CGRYCG	1 cut(s)	684
BstNI	CCWGG	6 cut(s)	176, 476, 626, 1048, 1238, 1325
BstNSI	RCATGY	1 cut(s)	1810
BstPI	GGTNACC	1 cut(s)	1309
BstSCI	CCNGG	9 cut(s)	174, 474, 624, 1009, 1046, 1236, 1313, 1323, 1779
BstSFI	CTRYAG	2 cut(s)	835, 1713
BstV1I	GCAGC	6 cut(s)	26, 309, 474, 813, 1962, 2035
BstV2I	GAAGAC	1 cut(s)	1432
BstX2I	RGATCY	1 cut(s)	1496
BstXI	CCANNNNNNTGG	1 cut(s)	1192
BstYI	RGATCY	1 cut(s)	1496
Bsu36I	CCTNAGG	1 cut(s)	1359
BtgI	CCRYGG	5 cut(s)	76, 877, 1141, 1191, 1923
BtgZI	GCGATG	2 cut(s)	412, 1372
BtrI	CACGTC	3 cut(s)	115, 1102, 1696
BtsCI	GGATG	4 cut(s)	296, 711, 1320, 1977
BtsI	GCAGTG	2 cut(s)	1308, 1590
BtsIMutI	CAGTG	4 cut(s)	1308, 1590, 1756, 2067
BveI	ACCTGC	2 cut(s)	534, 1427
CaiI	CAGNNNCTG	2 cut(s)	106, 631
CciI	TCATGA	1 cut(s)	1464
Cfr10I	RCCGGY	1 cut(s)	140
Cfr42I	CCGCGG	3 cut(s)	880, 1144, 1926
CsiI	ACCWGGT	1 cut(s)	174
Csp6I	GTAC	5 cut(s)	821, 1708, 1822, 1828, 1886
CviQI	GTAC	5 cut(s)	821, 1708, 1822, 1828, 1886
DdeI	CTNAG	9 cut(s)	502, 792, 872, 909, 1359, 1729, 1866, 2037, 2042
DpnI	GATC	9 cut(s)	500, 683, 710, 788, 989, 1071, 1223, 1498, 2066
DpnII	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
DraIII	CACNNNGTG	1 cut(s)	178
EaeI	YGGCCR	6 cut(s)	97, 417, 660, 880, 1230, 1326
Eam1104I	CTCTTC	4 cut(s)	872, 1536, 1751, 2105
EarI	CTCTTC	4 cut(s)	872, 1536, 1751, 2105
EciI	GGCGGA	6 cut(s)	569, 745, 1072, 1117, 1543, 1555
Ecl136II	GAGCTC	1 cut(s)	52
Eco130I	CCWWGG	5 cut(s)	212, 414, 432, 587, 1191
Eco24I	GRGCYC	2 cut(s)	54, 1605
Eco31I	GGTCTC	2 cut(s)	1159, 1466
Eco32I	GATATC	1 cut(s)	30
Eco53kI	GAGCTC	1 cut(s)	52
Eco57I	CTGAAG	3 cut(s)	128, 1732, 1952
Eco81I	CCTNAGG	1 cut(s)	1359
Eco88I	CYCGRG	4 cut(s)	6, 1261, 1379, 1703
Eco91I	GGTNACC	1 cut(s)	1309
EcoICRI	GAGCTC	1 cut(s)	52
EcoO109I	RGGNCCY	4 cut(s)	472, 775, 1017, 1858
EcoO65I	GGTNACC	1 cut(s)	1309
EcoRI	GAATTC	1 cut(s)	59
EcoRII	CCWGG	6 cut(s)	174, 474, 624, 1046, 1236, 1323
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	5 cut(s)	212, 414, 432, 587, 1191
EcoT22I	ATGCAT	1 cut(s)	168
EcoT38I	GRGCYC	2 cut(s)	54, 1605
ErhI	CCWWGG	5 cut(s)	212, 414, 432, 587, 1191
Esp3I	CGTCTC	5 cut(s)	548, 682, 1237, 1258, 1955
FaqI	GGGAC	4 cut(s)	1030, 1181, 1673, 1904
FauI	CCCGC	5 cut(s)	612, 1007, 1148, 1592, 1930
FblI	GTMKAC	1 cut(s)	398
FokI	GGATG	4 cut(s)	303, 698, 1307, 1984
FriOI	GRGCYC	2 cut(s)	54, 1605
FspBI	CTAG	5 cut(s)	213, 348, 588, 1523, 1814
GsaI	CCCAGC	2 cut(s)	1298, 1970
GsuI	CTGGAG	2 cut(s)	497, 764
HaeII	RGCGCY	5 cut(s)	596, 632, 670, 1541, 1931
Hin1I	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
HincII	GTYRAC	1 cut(s)	399
HindII	GTYRAC	1 cut(s)	399
HindIII	AAGCTT	1 cut(s)	1940
HphI	GGTGA	4 cut(s)	78, 161, 1303, 1948
Hpy166II	GTNNAC	8 cut(s)	240, 306, 399, 700, 823, 1404, 1710, 1886
Hpy188I	TCNGA	8 cut(s)	27, 108, 119, 249, 686, 958, 992, 1286
Hpy8I	GTNNAC	8 cut(s)	240, 306, 399, 700, 823, 1404, 1710, 1886
HpyAV	CCTTC	8 cut(s)	347, 769, 995, 1213, 1402, 1420, 1751, 1927
HpyCH4III	ACNGT	5 cut(s)	547, 889, 1493, 1769, 2071
HpyCH4IV	ACGT	5 cut(s)	114, 510, 1101, 1506, 1695
HpyCH4V	TGCA	3 cut(s)	166, 517, 1843
HpyF3I	CTNAG	9 cut(s)	502, 792, 872, 909, 1359, 1729, 1866, 2037, 2042
HpySE526I	ACGT	5 cut(s)	114, 510, 1101, 1506, 1695
Hsp92I	GRCGYC	4 cut(s)	411, 1176, 1428, 1683
KflI	GGGWCCC	1 cut(s)	1017
KspI	CCGCGG	3 cut(s)	880, 1144, 1926
Kzo9I	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
LguI	GCTCTTC	1 cut(s)	1536
LmnI	GCTCC	7 cut(s)	49, 1010, 1085, 1166, 1253, 1276, 2124
Lsp1109I	GCAGC	6 cut(s)	26, 309, 474, 813, 1962, 2035
LweI	GCATC	3 cut(s)	175, 435, 528
MabI	ACCWGGT	1 cut(s)	174
MaeI	CTAG	5 cut(s)	213, 348, 588, 1523, 1814
MaeII	ACGT	5 cut(s)	114, 510, 1101, 1506, 1695
MaeIII	GTNAC	5 cut(s)	84, 1309, 1666, 1809, 2032
MalI	GATC	9 cut(s)	500, 683, 710, 788, 989, 1071, 1223, 1498, 2066
MbiI	CCGCTC	2 cut(s)	384, 1080
MboI	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
MboII	GAAGA	9 cut(s)	622, 859, 1432, 1453, 1491, 1523, 1738, 1750, 2092
MflI	RGATCY	1 cut(s)	1496
MhlI	GDGCHC	5 cut(s)	54, 183, 234, 375, 1605
MlsI	TGGCCA	2 cut(s)	419, 1328
MluCI	AATT	2 cut(s)	59, 2053
MluNI	TGGCCA	2 cut(s)	419, 1328
MlyI	GAGTC	8 cut(s)	151, 193, 394, 488, 740, 947, 1374, 2029
MmeI	TCCRAC	1 cut(s)	97
Mox20I	TGGCCA	2 cut(s)	419, 1328
Mph1103I	ATGCAT	1 cut(s)	168
MscI	TGGCCA	2 cut(s)	419, 1328
MseI	TTAA	1 cut(s)	1997
MslI	CAYNNNNRTG	1 cut(s)	1463
Msp20I	TGGCCA	2 cut(s)	419, 1328
MspA1I	CMGCKG	7 cut(s)	784, 879, 897, 1143, 1909, 1925, 2041
MspR9I	CCNGG	9 cut(s)	176, 476, 626, 1011, 1048, 1238, 1315, 1325, 1781
Mva1269I	GAATGC	1 cut(s)	1275
MvaI	CCWGG	6 cut(s)	176, 476, 626, 1048, 1238, 1325
NciI	CCSGG	3 cut(s)	1011, 1315, 1781
NcoI	CCATGG	1 cut(s)	1191
NdeII	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
NmeAIII	GCCGAG	6 cut(s)	75, 354, 598, 624, 855, 955
NmuCI	GTSAC	5 cut(s)	84, 1309, 1666, 1809, 2032
NsiI	ATGCAT	1 cut(s)	168
NspI	RCATGY	1 cut(s)	1810
PaeR7I	CTCGAG	1 cut(s)	1261
PagI	TCATGA	1 cut(s)	1464
PaqCI	CACCTGC	1 cut(s)	1427
PciI	ACATGT	1 cut(s)	1806
PciSI	GCTCTTC	1 cut(s)	1536
PcsI	WCGNNNNNNNCGW	4 cut(s)	189, 1230, 1434, 1692
PctI	GAATGC	1 cut(s)	1275
PfeI	GAWTC	7 cut(s)	22, 265, 840, 1287, 1342, 1776, 2095
Pfl23II	CGTACG	1 cut(s)	1827
PflFI	GACNNNGTC	1 cut(s)	695
PflMI	CCANNNNNTGG	1 cut(s)	1338
PfoI	TCCNGGA	2 cut(s)	474, 1779
Ple19I	CGATCG	1 cut(s)	684
PleI	GAGTC	8 cut(s)	151, 193, 394, 487, 740, 947, 1373, 2029
PpsI	GAGTC	8 cut(s)	151, 193, 394, 487, 740, 947, 1373, 2029
PpuMI	RGGWCCY	4 cut(s)	472, 775, 1017, 1858
PscI	ACATGT	1 cut(s)	1806
Psp124BI	GAGCTC	1 cut(s)	54
Psp5II	RGGWCCY	4 cut(s)	472, 775, 1017, 1858
Psp6I	CCWGG	6 cut(s)	174, 474, 624, 1046, 1236, 1323
PspEI	GGTNACC	1 cut(s)	1309
PspFI	CCCAGC	2 cut(s)	1294, 1966
PspGI	CCWGG	6 cut(s)	174, 474, 624, 1046, 1236, 1323
PspLI	CGTACG	1 cut(s)	1827
PspPPI	RGGWCCY	4 cut(s)	472, 775, 1017, 1858
PstNI	CAGNNNCTG	2 cut(s)	106, 631
PsuI	RGATCY	1 cut(s)	1496
PsyI	GACNNNGTC	1 cut(s)	695
PvuI	CGATCG	1 cut(s)	684
PvuII	CAGCTG	1 cut(s)	2041
RsaI	GTAC	5 cut(s)	822, 1709, 1823, 1829, 1887
RsaNI	GTAC	5 cut(s)	821, 1708, 1822, 1828, 1886
RseI	CAYNNNNRTG	1 cut(s)	1463
SacI	GAGCTC	1 cut(s)	54
SacII	CCGCGG	3 cut(s)	880, 1144, 1926
SalI	GTCGAC	1 cut(s)	397
SapI	GCTCTTC	1 cut(s)	1536
SaqAI	TTAA	1 cut(s)	1997
Sau3AI	GATC	9 cut(s)	498, 681, 708, 786, 987, 1069, 1221, 1496, 2064
SchI	GAGTC	8 cut(s)	151, 193, 394, 488, 740, 947, 1374, 2029
ScrFI	CCNGG	9 cut(s)	176, 476, 626, 1011, 1048, 1238, 1315, 1325, 1781
SduI	GDGCHC	5 cut(s)	54, 183, 234, 375, 1605
SexAI	ACCWGGT	1 cut(s)	174
SfaNI	GCATC	3 cut(s)	175, 435, 528
SfcI	CTRYAG	2 cut(s)	835, 1713
Sfr274I	CTCGAG	1 cut(s)	1261
Sfr303I	CCGCGG	3 cut(s)	880, 1144, 1926
SgrAI	CRCCGGYG	1 cut(s)	140
SgrBI	CCGCGG	3 cut(s)	880, 1144, 1926
SlaI	CTCGAG	1 cut(s)	1261
SmiMI	CAYNNNNRTG	1 cut(s)	1463
SmlI	CTYRAG	1 cut(s)	1261
SmoI	CTYRAG	1 cut(s)	1261
SpeI	ACTAGT	1 cut(s)	1813
Sse9I	AATT	2 cut(s)	59, 2053
SspMI	CTAG	5 cut(s)	213, 348, 588, 1523, 1814
SstI	GAGCTC	1 cut(s)	54
StyD4I	CCNGG	9 cut(s)	174, 474, 624, 1009, 1046, 1236, 1313, 1323, 1779
StyI	CCWWGG	5 cut(s)	212, 414, 432, 587, 1191
TaaI	ACNGT	5 cut(s)	547, 889, 1493, 1769, 2071
TaiI	ACGT	5 cut(s)	117, 513, 1104, 1509, 1698
TaqII	GACCGA	1 cut(s)	1906
TasI	AATT	2 cut(s)	59, 2053
TatI	WGTACW	1 cut(s)	1885
TfiI	GAWTC	7 cut(s)	22, 265, 840, 1287, 1342, 1776, 2095
Tru1I	TTAA	1 cut(s)	1997
Tru9I	TTAA	1 cut(s)	1997
TscAI	CASTG	4 cut(s)	1308, 1590, 1756, 2074
TseFI	GTSAC	5 cut(s)	84, 1309, 1666, 1809, 2032
TseI	GCWGC	6 cut(s)	14, 322, 487, 801, 1950, 2023
Tsp45I	GTSAC	5 cut(s)	84, 1309, 1666, 1809, 2032
TspDTI	ATGAA	7 cut(s)	751, 1073, 1268, 1309, 1375, 1453, 1750
TspGWI	ACGGA	3 cut(s)	116, 213, 808
TspRI	CASTG	4 cut(s)	1308, 1590, 1756, 2074
Tth111I	GACNNNGTC	1 cut(s)	695
Van91I	CCANNNNNTGG	1 cut(s)	1338
XapI	RAATTY	1 cut(s)	59
XceI	RCATGY	1 cut(s)	1810
XhoI	CTCGAG	1 cut(s)	1261
XmaJI	CCTAGG	2 cut(s)	212, 587
XmiI	GTMKAC	1 cut(s)	398
XspI	CTAG	5 cut(s)	213, 348, 588, 1523, 1814
Zsp2I	ATGCAT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.