Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000112.1

Orthogroup ID

OG0009902

Physical Location & Seq

Genomic Coordinates Forward (+)

69823 .. 75393

Gene Structure 5571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000112.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

atgtctcgggtagcagcagagaatcagatatcgccgtttttctctatggagctcgacgaattcccacgcgcctcccacggcgcgtcaccctcactcggccagcttctcaagcacgtcggagatgtccgtaaggaggccaccggcgacggcggcgagactcccatgcatcaccaccaggtgctcgacatgagcgacgagactcttgaaaaccctaggtcgcttccgttcgtgctctcgttcactaatctgacttacagcgtcaagattcgccggaagttcagtctttctgggatgttaactggccagaacaaccgtctcggcgctgcgacgctgtcggaacccgtcggaggggagagcctgttcacgaggaccaagacgctgctgaacgacatctccggcgaggctagggaaggagaagtgctggcggtgctcggcgctagcggttccggcaagtcgactctcatcgacgccttggccaatcgcatcgccaagggaagcctgaaaggaaaggtctgcctcaacggcgaggtcctggagtcgcggctgctcaaagtgatctcagcttacgtcatgcaggacgacctgctattcccgatgctgacggtggaggagacgctcatgttcgccgccgagttccgcctccctagggcgctctcgaaatccaagaagaaaatgagggtccaggcactgatagaccagctcggcctccgcaacgctgccagcaccatcataggcgacgagggccaccgcggcgtctccggcggagagcgccgccgcgtttcgatcggaatcgacatcgtccacgacccgatcatcctcttcctcgacgagccgacctccggcctcgactccacctccgccttcatggtcgtcaaggtcctccagcggatcgctcagtccggcagcattgtggtcttgtccgtacaccagccgagctacagaatcttgggactgctggaccgtctcctcttcctcagccgcggccaaaccgttttcagcggctcgccagctcagcttccctcctacttcgccgagttcgggcggcccatacccgactccgaaaacaaaaccgagttcgctctggacctgatccgagaactggaaggctcccccggcgggacccaatccctcgtcgagttcaacaactcctggcagaccatgaagcacagcgatcactaccgctccgccaccgacacacgacacgtcgttcccctccaagaagccatctccgccagcatttcccgcggcaagctggtctccggcgccaccaacaacgacgccagccccaactccatggtccccaccttcgccaaccccatctggatcgaaatggccgtcctggcgagacgctccatgaaaaactcgagacgaatgccggagctgttcggaatccggctcggcgcagtggtggtcaccgggttcatcctggccaccatgttctggaatctggataatacccctaagggagtccaagaacgcctcgggttcatcgccttcgccatgtccaccaccttctacacctgcgccgacgccttacccgtcttcctccaagaacgctacatcttcatgagagagaccgcctacaatgcctatcgtagatcttcgtacgttctttcacactctctagtggctcttccggcgctggttttcctctccgccgcgttctccgccatcacattctgggcagtgggcctcgacggcgggctcacggggttcctattctacttcctcatcatcttggcctcgttctgggccggaagctcattcgtcacattcctctccggcgtcgtcccccacgtcatgctcgggtacactatagtcgtggcaatcttagcctacttccttctcttcagtggcttcttcataaaccgtaatagaatcccggactactggatttggttccactacatgtcactagtgaagtacccctacgaggctgtaatgcagaacgagtttcaggacccgactaagtgcttcgtgaggggtgtacagatattcgataatactccgctggcttcggtcccggcggcgctgaaggtgaagcttctgggcagcatgagcgagacgctggggatgacgattacgaggacgacttgcttaacgactgggagtgatttattgaagcagcagggagtgactcagctgagcaagtggaattgcttgtggatcacggtggcgtggggtgaagtacggacgtcgactcaacaggcaggttccaagcgacgacgacgacggcgcggggctggtcggagggaggccggaggcgtcccagacctcttctgggaggcgttaaaggtcggaggaggtcgggcttgccggtttttgggcagccacctcacctgcagttgcaggttctatgcagcaccgcagaatcgtcgccggcgactcctcggcaagacccccggcgtccctccggcaagctctaattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043207 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

809

Amino Acids

89.17

Weight (kDa)

9.56

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39350 AT3G55090 AT5G13580
fragaria_vesca	FvH4_7g20800
malus_domestica	MD01G1117400.v1.1 MD07G1184900.v1.1
prunus_persica	Prupe.2G224800_v2.0.a1
pyrus_communis	pycom01g14510 pycom07g17710
rosa_chinensis	RchiOBHm_Chr1g0365031
rosa_laevigata	RLG00000027449
rosa_multiflora	Rmu_co8341207.1_g000001 Rmu_ssc0000112.1_g000014
rosa_roxburghii	Rroxscaffold_4G00291530 Rroxscaffold_4G00291980
rosa_rugosa	Rorug01G0319000
rosa_samantha	Rh1AG328100 Rh1BG289500 Rh1CG306100 Rh1DG320900
rosa_wichuraiana	Rw1G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1529, 2348
AatII	GACGTC	1 cut(s)	2198
Acc36I	ACCTGC	5 cut(s)	591, 1529, 2201, 2340, 2348
AccB1I	GGYRCC	1 cut(s)	1262
AccB7I	CCANNNNNTGG	1 cut(s)	1440
AccBSI	CCGCTC	1 cut(s)	1182
AccI	GTMKAC	2 cut(s)	455, 2198
AccII	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
AclWI	GGATC	4 cut(s)	896, 1084, 1331, 2174
AcoI	YGGCCR	6 cut(s)	97, 301, 474, 982, 1332, 1428
AcsI	RAATTY	1 cut(s)	59
AcuI	CTGAAG	2 cut(s)	1834, 2054
AcyI	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
AdeI	CACNNNGTG	1 cut(s)	178
AfaI	GTAC	6 cut(s)	924, 1607, 1811, 1925, 1989, 2190
AflIII	ACRYGT	2 cut(s)	1201, 1908
AgsI	TTSAA	3 cut(s)	206, 1141, 2122
AhlI	ACTAGT	1 cut(s)	1915
AjiI	CACGTC	3 cut(s)	115, 1204, 1798
AjnI	CCWGG	6 cut(s)	174, 531, 681, 1148, 1338, 1425
AloI	GAACNNNNNNTCC	4 cut(s)	344, 376, 377, 409
Alw21I	GWGCWC	4 cut(s)	54, 183, 234, 432
AlwI	GGATC	4 cut(s)	896, 1084, 1331, 2174
AlwNI	CAGNNNCTG	1 cut(s)	688
Ama87I	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
ApoI	RAATTY	1 cut(s)	59
ArsI	GACNNNNNNTTYG	2 cut(s)	1320, 1352
AspA2I	CCTAGG	2 cut(s)	212, 644
AsuC2I	CCSGG	5 cut(s)	1113, 1417, 1883, 2024, 2403
AsuHPI	GGTGA	6 cut(s)	78, 161, 1405, 2050, 2195, 2329
AsuNHI	GCTAGC	1 cut(s)	437
AvaI	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
AvrII	CCTAGG	2 cut(s)	212, 644
AxyI	CCTNAGG	1 cut(s)	1461
BalI	TGGCCA	3 cut(s)	303, 476, 1430
BanI	GGYRCC	1 cut(s)	1262
BanII	GRGCYC	2 cut(s)	54, 1707
BarI	GAAGNNNNNNTAC	2 cut(s)	1913, 1945
BauI	CACGAG	1 cut(s)	364
BbsI	GAAGAC	1 cut(s)	1534
Bbv12I	GWGCWC	4 cut(s)	54, 183, 234, 432
BbvCI	CCTCAGC	1 cut(s)	974
BccI	CCATC	4 cut(s)	734, 1232, 1325, 1679
BceAI	ACGGC	7 cut(s)	19, 94, 163, 538, 1319, 1714, 2249
BcgI	CGANNNNNNTGC	4 cut(s)	1354, 1388, 2357, 2391
BciT130I	CCWGG	6 cut(s)	176, 533, 683, 1150, 1340, 1427
BcnI	CCSGG	5 cut(s)	1113, 1417, 1883, 2024, 2403
BcuI	ACTAGT	1 cut(s)	1915
BfaI	CTAG	6 cut(s)	213, 405, 438, 645, 1625, 1916
BfmI	CTRYAG	3 cut(s)	937, 1815, 2341
BfoI	RGCGCY	7 cut(s)	324, 438, 653, 772, 1266, 1643, 2033
BfuAI	ACCTGC	5 cut(s)	591, 1529, 2201, 2340, 2348
BglI	GCCNNNNNGGC	4 cut(s)	522, 750, 1340, 1698
BglII	AGATCT	1 cut(s)	1598
BlnI	CCTAGG	2 cut(s)	212, 644
BlpI	GCTNAGC	2 cut(s)	1011, 2144
BmeT110I	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
BmgBI	CACGTC	3 cut(s)	115, 1204, 1798
BmrI	ACTGGG	1 cut(s)	2115
BmsI	GCATC	3 cut(s)	175, 492, 585
BmtI	GCTAGC	1 cut(s)	441
BmuI	ACTGGG	1 cut(s)	2115
BpiI	GAAGAC	1 cut(s)	1534
BplI	GAGNNNNNCTC	2 cut(s)	821, 853
BpmI	CTGGAG	2 cut(s)	554, 866
Bpu10I	CCTNAGC	1 cut(s)	974
Bpu1102I	GCTNAGC	2 cut(s)	1011, 2144
BpuEI	CTTGAG	1 cut(s)	92
BpuMI	CCSGG	5 cut(s)	1113, 1417, 1883, 2024, 2403
BsaBI	GATNNNNATC	1 cut(s)	788
BsaHI	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
BsaI	GGTCTC	2 cut(s)	1261, 1568
BsaXI	ACNNNNNCTCC	8 cut(s)	344, 374, 377, 407, 839, 869, 1166, 1196
Bse118I	RCCGGY	3 cut(s)	140, 2316, 2379
Bse1I	ACTGG	4 cut(s)	304, 1104, 1895, 2110
Bse21I	CCTNAGG	1 cut(s)	1461
Bse8I	GATNNNNATC	1 cut(s)	788
BseBI	CCWGG	6 cut(s)	176, 533, 683, 1150, 1340, 1427
BseGI	GGATG	4 cut(s)	297, 813, 1422, 2079
BseJI	GATNNNNATC	1 cut(s)	788
BseMII	CTCAG	6 cut(s)	573, 908, 988, 1025, 2135, 2153
BseNI	ACTGG	4 cut(s)	304, 1104, 1895, 2110
BseRI	GAGGAG	4 cut(s)	623, 956, 2316, 2378
BseYI	CCCAGC	1 cut(s)	2068
Bsh1236I	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
Bsh1285I	CGRYCG	1 cut(s)	786
BshNI	GGYRCC	1 cut(s)	1262
BsiEI	CGRYCG	1 cut(s)	786
BsiHKAI	GWGCWC	4 cut(s)	54, 183, 234, 432
BsiHKCI	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
BsiWI	CGTACG	1 cut(s)	1605
BslFI	GGGAC	7 cut(s)	963, 1132, 1283, 1775, 2006, 2252, 2393
BsmBI	CGTCTC	7 cut(s)	320, 605, 760, 968, 1339, 1360, 2057
BsmFI	GGGAC	7 cut(s)	963, 1132, 1283, 1775, 2006, 2252, 2393
BsmI	GAATGC	1 cut(s)	1377
Bso31I	GGTCTC	2 cut(s)	1261, 1568
BsoBI	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
Bsp1286I	GDGCHC	5 cut(s)	54, 183, 234, 432, 1707
Bsp1407I	TGTACA	1 cut(s)	1987
Bsp143I	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
Bsp1720I	GCTNAGC	2 cut(s)	1011, 2144
Bsp19I	CCATGG	1 cut(s)	1293
BspCNI	CTCAG	6 cut(s)	572, 907, 987, 1024, 2136, 2152
BspFNI	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
BspHI	TCATGA	1 cut(s)	1566
BspMAI	CTGCAG	1 cut(s)	2345
BspMI	ACCTGC	5 cut(s)	591, 1529, 2201, 2340, 2348
BspOI	GCTAGC	1 cut(s)	441
BspPI	GGATC	4 cut(s)	896, 1084, 1331, 2174
BspQI	GCTCTTC	1 cut(s)	1638
BspT107I	GGYRCC	1 cut(s)	1262
BspTNI	GGTCTC	2 cut(s)	1261, 1568
BsrBI	CCGCTC	1 cut(s)	1182
BsrFI	RCCGGY	3 cut(s)	140, 2316, 2379
BsrGI	TGTACA	1 cut(s)	1987
BsrI	ACTGG	4 cut(s)	304, 1104, 1895, 2110
BssAI	RCCGGY	3 cut(s)	140, 2316, 2379
BssMI	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
BssNI	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
BssSI	CACGAG	1 cut(s)	364
BssT1I	CCWWGG	5 cut(s)	212, 471, 489, 644, 1293
Bst2BI	CACGAG	1 cut(s)	364
Bst2UI	CCWGG	6 cut(s)	176, 533, 683, 1150, 1340, 1427
Bst4CI	ACNGT	6 cut(s)	314, 604, 962, 991, 1871, 2173
Bst6I	CTCTTC	5 cut(s)	824, 974, 1638, 1853, 2282
BstACI	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
BstAUI	TGTACA	1 cut(s)	1987
BstDEI	CTNAG	9 cut(s)	559, 894, 974, 1011, 1461, 1831, 1968, 2139, 2144
BstDSI	CCRYGG	5 cut(s)	76, 748, 979, 1243, 1293
BstEII	GGTNACC	1 cut(s)	1411
BstF5I	GGATG	4 cut(s)	297, 813, 1422, 2079
BstFNI	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
BstH2I	RGCGCY	7 cut(s)	324, 438, 653, 772, 1266, 1643, 2033
BstKTI	GATC	9 cut(s)	558, 786, 813, 891, 1092, 1174, 1326, 1601, 2169
BstMBI	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
BstMCI	CGRYCG	1 cut(s)	786
BstNI	CCWGG	6 cut(s)	176, 533, 683, 1150, 1340, 1427
BstNSI	RCATGY	1 cut(s)	1912
BstPI	GGTNACC	1 cut(s)	1411
BstSFI	CTRYAG	3 cut(s)	937, 1815, 2341
BstUI	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
BstV2I	GAAGAC	1 cut(s)	1534
BstX2I	RGATCY	1 cut(s)	1598
BstXI	CCANNNNNNTGG	1 cut(s)	1294
BstYI	RGATCY	1 cut(s)	1598
Bsu36I	CCTNAGG	1 cut(s)	1461
BtgI	CCRYGG	5 cut(s)	76, 748, 979, 1243, 1293
BtgZI	GCGATG	2 cut(s)	469, 1474
BtrI	CACGTC	3 cut(s)	115, 1204, 1798
BtsCI	GGATG	4 cut(s)	297, 813, 1422, 2079
BtsI	GCAGTG	2 cut(s)	1410, 1692
BtsIMutI	CAGTG	4 cut(s)	686, 1410, 1692, 1858
BveI	ACCTGC	5 cut(s)	591, 1529, 2201, 2340, 2348
CaiI	CAGNNNCTG	1 cut(s)	688
CciI	TCATGA	1 cut(s)	1566
Cfr10I	RCCGGY	3 cut(s)	140, 2316, 2379
Cfr42I	CCGCGG	3 cut(s)	751, 982, 1246
CsiI	ACCWGGT	1 cut(s)	174
Csp6I	GTAC	6 cut(s)	923, 1606, 1810, 1924, 1988, 2189
CviQI	GTAC	6 cut(s)	923, 1606, 1810, 1924, 1988, 2189
DdeI	CTNAG	9 cut(s)	559, 894, 974, 1011, 1461, 1831, 1968, 2139, 2144
DinI	GGCGCC	1 cut(s)	1264
DpnI	GATC	9 cut(s)	557, 785, 812, 890, 1091, 1173, 1325, 1600, 2168
DpnII	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
DraIII	CACNNNGTG	1 cut(s)	178
EaeI	YGGCCR	6 cut(s)	97, 301, 474, 982, 1332, 1428
Eam1104I	CTCTTC	5 cut(s)	824, 974, 1638, 1853, 2282
EarI	CTCTTC	5 cut(s)	824, 974, 1638, 1853, 2282
EciI	GGCGGA	7 cut(s)	626, 777, 847, 1174, 1219, 1645, 1657
Ecl136II	GAGCTC	1 cut(s)	52
Eco130I	CCWWGG	5 cut(s)	212, 471, 489, 644, 1293
Eco24I	GRGCYC	2 cut(s)	54, 1707
Eco31I	GGTCTC	2 cut(s)	1261, 1568
Eco32I	GATATC	1 cut(s)	30
Eco53kI	GAGCTC	1 cut(s)	52
Eco57I	CTGAAG	2 cut(s)	1834, 2054
Eco81I	CCTNAGG	1 cut(s)	1461
Eco88I	CYCGRG	4 cut(s)	6, 1363, 1481, 1805
Eco91I	GGTNACC	1 cut(s)	1411
EcoICRI	GAGCTC	1 cut(s)	52
EcoO109I	RGGNCCY	4 cut(s)	529, 877, 1119, 1960
EcoO65I	GGTNACC	1 cut(s)	1411
EcoRI	GAATTC	1 cut(s)	59
EcoRII	CCWGG	6 cut(s)	174, 531, 681, 1148, 1338, 1425
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	5 cut(s)	212, 471, 489, 644, 1293
EcoT22I	ATGCAT	1 cut(s)	168
EcoT38I	GRGCYC	2 cut(s)	54, 1707
EgeI	GGCGCC	1 cut(s)	1264
EheI	GGCGCC	1 cut(s)	1264
ErhI	CCWWGG	5 cut(s)	212, 471, 489, 644, 1293
Esp3I	CGTCTC	7 cut(s)	320, 605, 760, 968, 1339, 1360, 2057
FaqI	GGGAC	7 cut(s)	963, 1132, 1283, 1775, 2006, 2252, 2393
FauI	CCCGC	4 cut(s)	1109, 1250, 1694, 2231
FblI	GTMKAC	2 cut(s)	455, 2198
FokI	GGATG	4 cut(s)	304, 800, 1409, 2086
FriOI	GRGCYC	2 cut(s)	54, 1707
FspBI	CTAG	6 cut(s)	213, 405, 438, 645, 1625, 1916
GsaI	CCCAGC	1 cut(s)	2072
GsuI	CTGGAG	2 cut(s)	554, 866
HaeII	RGCGCY	7 cut(s)	324, 438, 653, 772, 1266, 1643, 2033
Hin1I	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
HincII	GTYRAC	3 cut(s)	297, 456, 2199
HindII	GTYRAC	3 cut(s)	297, 456, 2199
HindIII	AAGCTT	1 cut(s)	2042
HpaI	GTTAAC	1 cut(s)	297
HphI	GGTGA	6 cut(s)	78, 161, 1405, 2050, 2195, 2329
HpyAV	CCTTC	8 cut(s)	404, 871, 1097, 1315, 1504, 1522, 1853, 2029
HpyCH4III	ACNGT	6 cut(s)	314, 604, 962, 991, 1871, 2173
HpyCH4IV	ACGT	6 cut(s)	114, 567, 1203, 1608, 1797, 2195
HpyCH4V	TGCA	6 cut(s)	166, 574, 1945, 2343, 2349, 2360
HpyF3I	CTNAG	9 cut(s)	559, 894, 974, 1011, 1461, 1831, 1968, 2139, 2144
HpySE526I	ACGT	6 cut(s)	114, 567, 1203, 1608, 1797, 2195
Hsp92I	GRCGYC	9 cut(s)	468, 753, 1263, 1278, 1530, 1785, 2195, 2265, 2406
KasI	GGCGCC	1 cut(s)	1262
KflI	GGGWCCC	1 cut(s)	1119
KroI	GCCGGC	1 cut(s)	2379
KroNI	GCCGGC	1 cut(s)	2381
KspAI	GTTAAC	1 cut(s)	297
KspI	CCGCGG	3 cut(s)	751, 982, 1246
Kzo9I	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
LguI	GCTCTTC	1 cut(s)	1638
LmnI	GCTCC	5 cut(s)	49, 1112, 1187, 1355, 1378
LweI	GCATC	3 cut(s)	175, 492, 585
MabI	ACCWGGT	1 cut(s)	174
MaeI	CTAG	6 cut(s)	213, 405, 438, 645, 1625, 1916
MaeII	ACGT	6 cut(s)	114, 567, 1203, 1608, 1797, 2195
MaeIII	GTNAC	5 cut(s)	84, 1411, 1768, 1911, 2134
MalI	GATC	9 cut(s)	557, 785, 812, 890, 1091, 1173, 1325, 1600, 2168
MbiI	CCGCTC	1 cut(s)	1182
MboI	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
MflI	RGATCY	1 cut(s)	1598
MhlI	GDGCHC	5 cut(s)	54, 183, 234, 432, 1707
MlsI	TGGCCA	3 cut(s)	303, 476, 1430
MluCI	AATT	3 cut(s)	59, 2155, 2425
MluNI	TGGCCA	3 cut(s)	303, 476, 1430
Mly113I	GGCGCC	1 cut(s)	1263
MmeI	TCCRAC	5 cut(s)	97, 315, 325, 2228, 2278
Mox20I	TGGCCA	3 cut(s)	303, 476, 1430
Mph1103I	ATGCAT	1 cut(s)	168
MreI	CGCCGGCG	1 cut(s)	2379
MroNI	GCCGGC	1 cut(s)	2379
MscI	TGGCCA	3 cut(s)	303, 476, 1430
MseI	TTAA	3 cut(s)	296, 2099, 2291
MslI	CAYNNNNRTG	1 cut(s)	1565
Msp20I	TGGCCA	3 cut(s)	303, 476, 1430
MspA1I	CMGCKG	7 cut(s)	750, 886, 981, 999, 1245, 2011, 2143
Mva1269I	GAATGC	1 cut(s)	1377
MvaI	CCWGG	6 cut(s)	176, 533, 683, 1150, 1340, 1427
MvnI	CGCG	9 cut(s)	69, 83, 541, 750, 777, 981, 1245, 1661, 2238
NaeI	GCCGGC	1 cut(s)	2381
NarI	GGCGCC	1 cut(s)	1263
NciI	CCSGG	5 cut(s)	1113, 1417, 1883, 2024, 2403
NcoI	CCATGG	1 cut(s)	1293
NdeII	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
NgoMIV	GCCGGC	1 cut(s)	2379
NheI	GCTAGC	1 cut(s)	437
NmeAIII	GCCGAG	9 cut(s)	75, 297, 411, 655, 681, 957, 1057, 1377, 2370
NmuCI	GTSAC	5 cut(s)	84, 1411, 1768, 1911, 2134
NsiI	ATGCAT	1 cut(s)	168
NspI	RCATGY	1 cut(s)	1912
PaeR7I	CTCGAG	1 cut(s)	1363
PagI	TCATGA	1 cut(s)	1566
PaqCI	CACCTGC	2 cut(s)	1529, 2348
PciI	ACATGT	1 cut(s)	1908
PciSI	GCTCTTC	1 cut(s)	1638
PcsI	WCGNNNNNNNCGW	5 cut(s)	189, 1332, 1536, 1794, 2380
PctI	GAATGC	1 cut(s)	1377
PdiI	GCCGGC	1 cut(s)	2381
PfeI	GAWTC	8 cut(s)	22, 265, 789, 942, 1389, 1444, 1878, 2371
Pfl23II	CGTACG	1 cut(s)	1605
PflFI	GACNNNGTC	2 cut(s)	331, 797
PflMI	CCANNNNNTGG	1 cut(s)	1440
PfoI	TCCNGGA	2 cut(s)	531, 1881
Ple19I	CGATCG	1 cut(s)	786
PluTI	GGCGCC	1 cut(s)	1266
PpuMI	RGGWCCY	4 cut(s)	529, 877, 1119, 1960
PscI	ACATGT	1 cut(s)	1908
Psp124BI	GAGCTC	1 cut(s)	54
Psp5II	RGGWCCY	4 cut(s)	529, 877, 1119, 1960
Psp6I	CCWGG	6 cut(s)	174, 531, 681, 1148, 1338, 1425
PspEI	GGTNACC	1 cut(s)	1411
PspFI	CCCAGC	1 cut(s)	2068
PspGI	CCWGG	6 cut(s)	174, 531, 681, 1148, 1338, 1425
PspLI	CGTACG	1 cut(s)	1605
PspPPI	RGGWCCY	4 cut(s)	529, 877, 1119, 1960
PstI	CTGCAG	1 cut(s)	2345
PstNI	CAGNNNCTG	1 cut(s)	688
PsuI	RGATCY	1 cut(s)	1598
PsyI	GACNNNGTC	2 cut(s)	331, 797
PvuI	CGATCG	1 cut(s)	786
PvuII	CAGCTG	1 cut(s)	2143
RsaI	GTAC	6 cut(s)	924, 1607, 1811, 1925, 1989, 2190
RsaNI	GTAC	6 cut(s)	923, 1606, 1810, 1924, 1988, 2189
RseI	CAYNNNNRTG	1 cut(s)	1565
SacI	GAGCTC	1 cut(s)	54
SacII	CCGCGG	3 cut(s)	751, 982, 1246
SalI	GTCGAC	2 cut(s)	454, 2197
SapI	GCTCTTC	1 cut(s)	1638
SaqAI	TTAA	3 cut(s)	296, 2099, 2291
Sau3AI	GATC	9 cut(s)	555, 783, 810, 888, 1089, 1171, 1323, 1598, 2166
SduI	GDGCHC	5 cut(s)	54, 183, 234, 432, 1707
SexAI	ACCWGGT	1 cut(s)	174
SfaNI	GCATC	3 cut(s)	175, 492, 585
SfcI	CTRYAG	3 cut(s)	937, 1815, 2341
SfoI	GGCGCC	1 cut(s)	1264
Sfr274I	CTCGAG	1 cut(s)	1363
Sfr303I	CCGCGG	3 cut(s)	751, 982, 1246
SgrAI	CRCCGGYG	2 cut(s)	140, 2379
SgrBI	CCGCGG	3 cut(s)	751, 982, 1246
SlaI	CTCGAG	1 cut(s)	1363
SmiMI	CAYNNNNRTG	1 cut(s)	1565
SmlI	CTYRAG	2 cut(s)	107, 1363
SmoI	CTYRAG	2 cut(s)	107, 1363
SpeI	ACTAGT	1 cut(s)	1915
Sse9I	AATT	3 cut(s)	59, 2155, 2425
SspDI	GGCGCC	1 cut(s)	1262
SspMI	CTAG	6 cut(s)	213, 405, 438, 645, 1625, 1916
SstI	GAGCTC	1 cut(s)	54
StyI	CCWWGG	5 cut(s)	212, 471, 489, 644, 1293
TaaI	ACNGT	6 cut(s)	314, 604, 962, 991, 1871, 2173
TaiI	ACGT	6 cut(s)	117, 570, 1206, 1611, 1800, 2198
TaqII	GACCGA	1 cut(s)	2008
TasI	AATT	3 cut(s)	59, 2155, 2425
TatI	WGTACW	1 cut(s)	1987
TfiI	GAWTC	8 cut(s)	22, 265, 789, 942, 1389, 1444, 1878, 2371
Tru1I	TTAA	3 cut(s)	296, 2099, 2291
Tru9I	TTAA	3 cut(s)	296, 2099, 2291
TscAI	CASTG	4 cut(s)	693, 1410, 1692, 1858
TseFI	GTSAC	5 cut(s)	84, 1411, 1768, 1911, 2134
Tsp45I	GTSAC	5 cut(s)	84, 1411, 1768, 1911, 2134
TspDTI	ATGAA	7 cut(s)	853, 1175, 1370, 1411, 1477, 1555, 1852
TspGWI	ACGGA	4 cut(s)	116, 213, 910, 2206
TspRI	CASTG	4 cut(s)	693, 1410, 1692, 1858
Tth111I	GACNNNGTC	2 cut(s)	331, 797
Van91I	CCANNNNNTGG	1 cut(s)	1440
XapI	RAATTY	1 cut(s)	59
XceI	RCATGY	1 cut(s)	1912
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2277
XhoI	CTCGAG	1 cut(s)	1363
XmaJI	CCTAGG	2 cut(s)	212, 644
XmiI	GTMKAC	2 cut(s)	455, 2198
XspI	CTAG	6 cut(s)	213, 405, 438, 645, 1625, 1916
ZraI	GACGTC	1 cut(s)	2196
Zsp2I	ATGCAT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.