Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009902

Physical Location & Seq

Genomic Coordinates Forward (+)

11971721 .. 11973970

Gene Structure 2250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGTCTCGTGTAGCAGCAGAGAATCAGATATCGCCGTTCTTCTCTATGGAGCTCGACGACTTCCCACGACCCTCCCACGGCGCGTCACCCTCACTCGGCCAGCTTCTGAAGCACGTCGGAGACGTCCGTAAGGAGGCCACCGGCGACGGCGGCGAGACTCCGATGCATCACCACCAGGTGCTCGACATGAACGACGACGAGAGTCTTGAAAACCCTACGTCACTTCCGTTCGTGCTCTCGTTCACTAATCTGACTTACAGCGTCAAGATTCGCCGGAAGTTCAGTCTTTCCGGGATGTTTACTGGCCAGAACAACCGTCTCGGCGCGGCGACGCTGTCGGAGCCGGTAGGAGGAGAGAGCCTGTTCACGAGGTCCAAGACGCTGCTGAACGACATCTCCGGCGAGGCTAGAGAAGGAGAAGTGCTGGCGGTGCTCGGCGCGAGCGGTTCCGGCAAGTCGACTCTCATCGACGCCTTGGCCAATCGCATCGCCAAGGGAAGCCTGAAAGGAAAGGTCAGCCTCAACGGCGAGGTCTTGGAGTCGCGGCTGCTCAAAGTGATCTCAGCTTACGTCATGCAGGACGATCTGCTATTCCCGATGCTGACGGTGGAGGAGACTCTCATGTTCGCCGCCGAGTTCCGCCTCCCTAGGGCGCTCTCGAAATCCAAGAAGAAAATGCGGGTCCAGGCGCTGATAGACCAGCTCGGCCTCCGCAACGCGGCCAGCACCATCATCGGCGACGAGGGCCACCGCGGGGTCTCCGGCGGAGAGCGCCGCCGCGTCTCGATAGGAATCGACATAGTCCACGACCCGATCATCCTGTTCCTCGACGAGCCGACCTCCGGCCTCGACTCCACCTCCGCCTTCATGGTCGTCAAGGTCCTCCAGCGGATCGCTCAGTCCGGCAGCATTGTGGTCTTGTCCGTACACCAGCCGAGCTACAGAATCTTGGGCCTGCTGGACCGCCTCCTCTTCCTCAGCCGCGGCCAAACCGTTTTCAGCGGCTCGCCAGCTCAGCTTCCCTCCTACTTCGCCGAGTTCGGGCGGCCCATACCCGACTCCGAAAACAAAACCGAGTTCGCTCTGGACCTGATCCGAGAACTTGAAGGCTCCCCCGGCGGGACCCAATCCCTCGTCGAGTTCAACAGCACCTGGCAGACAATGAAGCACAGCGATCACTACCGCTCCGCCACCGACATACGACACGTCGTTCCCCTCCAAGAAGCCATCTCCGCCAGCATTTCCCGAGGCAAGCTCGTCTCCGGCGCCACCAACAACGACGCCAGCCCCAACTCCATGGTCCCCACATTCGCGAACCCCATCTGGATCGAAATGGCCGTCCTCGCGAGACGCTCCATGAAAAACTCGAGACGAATGCCGGAGCTGTTCGGAATCCGGCTCGGCGCCGTTGTGGTCACCGGGATCATCCTCGCCACCATGTTCTGGAATCTCGATAATACCCCTAAGGGAGTCCAAGAACGCCTCGGGTTCATTGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCCGACGCCTTACCCGTCTTCCTCCAAGAACGCTACATCTTCATGAGAGAGACCGCCTACAATGCCTACCGTAGATCTTCCTACGTTCTTTCACACTCTCTAGTGGCTCTTCCGGCACTGGTTTTCCTCTCCGCCGCGTTCTCCGCCATCACATTCTGGGCCGTGGGCCTCGACGGTGGGCTCTCGGGGTTCCTCTTCTACTTCCTCATCATCTTCGCCTCGTTCTGGGCCGGAAGCTCCTTCGTCACTTTCCTCTCCGGCGTCGTCCCCCACGTCATGCTCGGCTACACTATAGTCGTGGCAATCTTAGCCTACTTCCTTCTCTTCAGTGGCTTCTTCATAAACCGTAACAGAATCCCGGACTACTGGATTTGGTTCCACTACATGTCACTAGTGAAGTACCCCTACGAGGCTGTAATGCAGAACGAGTTTCAGGACCCGACTAAGTGCTTCGTGAGGGGTGTACAGATATTTGATAATACGCCGCTGGCTTCGGTCCCGGCGGCGCTGAAGGTGAAGCTTCTGGGCAGCATGAGCGAGACGCTGGGGATGAAGATTACGAGGACGACTTGCTTGACGACTGGGAGTGATTTATTGAAGCAGCAGGGAGTGACTCAGCTGAGCAAGTGGAATTGCTTGTGGATCACGGTGGCCTGGGGGTTTCTGTTCAGGATTCTCTTCTATTTTTCGTTGCTGATTGGGAGCAAGAACAAGAGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043207 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

749

Amino Acids

82.85

Weight (kDa)

9.14

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	129 - 281	7.1e-26	ABC transporter
ABC2_membrane_7	PF19055	310 - 446	1.2e-06	ABC-2 type transporter
ABC2_membrane	PF01061	446 - 653	5.5e-49	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39350 AT3G55090 AT5G13580
fragaria_vesca	FvH4_7g20800
malus_domestica	MD01G1117400.v1.1 MD07G1184900.v1.1
prunus_persica	Prupe.2G224800_v2.0.a1
pyrus_communis	pycom01g14510 pycom07g17710
rosa_chinensis	RchiOBHm_Chr1g0365031
rosa_laevigata	RLG00000027449
rosa_multiflora	Rmu_co8341207.1_g000001 Rmu_ssc0000112.1_g000014
rosa_roxburghii	Rroxscaffold_4G00291530 Rroxscaffold_4G00291980
rosa_rugosa	Rorug01G0319000
rosa_samantha	Rh1AG328100 Rh1BG289500 Rh1CG306100 Rh1DG320900
rosa_wichuraiana	Rw1G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1532
AatII	GACGTC	1 cut(s)	126
Acc36I	ACCTGC	1 cut(s)	1532
AccB1I	GGYRCC	2 cut(s)	1265, 1403
AccB7I	CCANNNNNTGG	1 cut(s)	1443
AccBSI	CCGCTC	2 cut(s)	444, 1185
AccI	GTMKAC	1 cut(s)	458
AclWI	GGATC	5 cut(s)	899, 1087, 1334, 1430, 2177
AcoI	YGGCCR	6 cut(s)	97, 304, 477, 720, 985, 1335
AcuI	CTGAAG	3 cut(s)	128, 1837, 2057
AcyI	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
AdeI	CACNNNGTG	1 cut(s)	178
AfaI	GTAC	3 cut(s)	927, 1928, 1992
AflIII	ACRYGT	2 cut(s)	1204, 1911
AgsI	TTSAA	4 cut(s)	209, 1106, 1144, 2125
AhlI	ACTAGT	1 cut(s)	1918
AjiI	CACGTC	3 cut(s)	115, 1207, 1801
AjnI	CCWGG	4 cut(s)	174, 684, 1151, 2180
AloI	GAACNNNNNNTCC	2 cut(s)	380, 412
Alw21I	GWGCWC	4 cut(s)	54, 183, 237, 435
AlwI	GGATC	5 cut(s)	899, 1087, 1334, 1430, 2177
AlwNI	CAGNNNCTG	3 cut(s)	106, 691, 1152
Ama87I	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
ApeKI	GCWGC	6 cut(s)	14, 382, 547, 906, 2055, 2128
ArsI	GACNNNNNNTTYG	2 cut(s)	1323, 1355
AspA2I	CCTAGG	1 cut(s)	647
AsuC2I	CCSGG	5 cut(s)	292, 1116, 1420, 1886, 2027
AsuHPI	GGTGA	4 cut(s)	78, 161, 1408, 2053
AvaI	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
AvaII	GGWCC	9 cut(s)	372, 682, 880, 961, 1087, 1122, 1300, 1963, 2023
AvrII	CCTAGG	1 cut(s)	647
AxyI	CCTNAGG	1 cut(s)	1464
BalI	TGGCCA	2 cut(s)	306, 479
BanI	GGYRCC	2 cut(s)	1265, 1403
BanII	GRGCYC	2 cut(s)	54, 1710
BarI	GAAGNNNNNNTAC	2 cut(s)	1916, 1948
BauI	CACGAG	2 cut(s)	6, 367
BbsI	GAAGAC	1 cut(s)	1537
Bbv12I	GWGCWC	4 cut(s)	54, 183, 237, 435
BbvCI	CCTCAGC	1 cut(s)	977
BbvI	GCAGC	6 cut(s)	26, 369, 534, 918, 2067, 2140
BccI	CCATC	4 cut(s)	737, 1235, 1328, 1682
BceAI	ACGGC	7 cut(s)	19, 94, 163, 541, 1322, 1391, 1673
BcgI	CGANNNNNNTGC	4 cut(s)	715, 749, 1357, 1391
BciT130I	CCWGG	4 cut(s)	176, 686, 1153, 2182
BcnI	CCSGG	5 cut(s)	292, 1116, 1420, 1886, 2027
BcuI	ACTAGT	1 cut(s)	1918
BfaI	CTAG	4 cut(s)	408, 648, 1628, 1919
BfmI	CTRYAG	2 cut(s)	940, 1818
BfoI	RGCGCY	6 cut(s)	656, 692, 775, 1269, 1407, 2036
BfuAI	ACCTGC	1 cut(s)	1532
BglI	GCCNNNNNGGC	1 cut(s)	525
BglII	AGATCT	1 cut(s)	1601
BlnI	CCTAGG	1 cut(s)	647
BlpI	GCTNAGC	2 cut(s)	1014, 2147
Bme1390I	CCNGG	9 cut(s)	176, 292, 686, 1116, 1153, 1420, 1886, 2027, 2182
Bme18I	GGWCC	9 cut(s)	372, 682, 880, 961, 1087, 1122, 1300, 1963, 2023
BmeT110I	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
BmgBI	CACGTC	3 cut(s)	115, 1207, 1801
BmrFI	CCNGG	9 cut(s)	176, 292, 686, 1116, 1153, 1420, 1886, 2027, 2182
BmrI	ACTGGG	1 cut(s)	2118
BmsI	GCATC	4 cut(s)	153, 175, 495, 588
BmuI	ACTGGG	1 cut(s)	2118
BoxI	GACNNNNGTC	1 cut(s)	201
BpiI	GAAGAC	1 cut(s)	1537
BplI	GAGNNNNNCTC	4 cut(s)	824, 856, 1239, 1271
BpmI	CTGGAG	1 cut(s)	869
Bpu10I	CCTNAGC	1 cut(s)	977
Bpu1102I	GCTNAGC	2 cut(s)	1014, 2147
BpuMI	CCSGG	5 cut(s)	292, 1116, 1420, 1886, 2027
BsaBI	GATNNNNATC	1 cut(s)	791
BsaHI	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
BsaI	GGTCTC	2 cut(s)	763, 1571
BsaXI	ACNNNNNCTCC	6 cut(s)	380, 410, 842, 872, 1169, 1199
Bse118I	RCCGGY	2 cut(s)	140, 343
Bse1I	ACTGG	4 cut(s)	307, 1650, 1898, 2113
Bse21I	CCTNAGG	1 cut(s)	1464
Bse3DI	GCAATG	1 cut(s)	1491
Bse8I	GATNNNNATC	1 cut(s)	791
BseBI	CCWGG	4 cut(s)	176, 686, 1153, 2182
BseGI	GGATG	4 cut(s)	300, 816, 1425, 2082
BseJI	GATNNNNATC	1 cut(s)	791
BseMI	GCAATG	1 cut(s)	1491
BseMII	CTCAG	6 cut(s)	576, 911, 991, 1028, 2138, 2156
BseNI	ACTGG	4 cut(s)	307, 1650, 1898, 2113
BseRI	GAGGAG	3 cut(s)	366, 626, 959
BseXI	GCAGC	6 cut(s)	26, 369, 534, 918, 2067, 2140
BseYI	CCCAGC	1 cut(s)	2071
BshNI	GGYRCC	2 cut(s)	1265, 1403
BsiHKAI	GWGCWC	4 cut(s)	54, 183, 237, 435
BsiHKCI	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
BslFI	GGGAC	4 cut(s)	1135, 1286, 1778, 2009
BsmBI	CGTCTC	7 cut(s)	114, 323, 787, 1264, 1342, 1363, 2060
BsmFI	GGGAC	4 cut(s)	1135, 1286, 1778, 2009
BsmI	GAATGC	1 cut(s)	1380
Bso31I	GGTCTC	2 cut(s)	763, 1571
BsoBI	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
Bsp1286I	GDGCHC	5 cut(s)	54, 183, 237, 435, 1710
Bsp1407I	TGTACA	1 cut(s)	1990
Bsp1720I	GCTNAGC	2 cut(s)	1014, 2147
Bsp19I	CCATGG	1 cut(s)	1296
Bsp68I	TCGCGA	2 cut(s)	1313, 1346
BspCNI	CTCAG	6 cut(s)	575, 910, 990, 1027, 2139, 2155
BspHI	TCATGA	1 cut(s)	1569
BspMI	ACCTGC	1 cut(s)	1532
BspPI	GGATC	5 cut(s)	899, 1087, 1334, 1430, 2177
BspQI	GCTCTTC	1 cut(s)	1641
BspT107I	GGYRCC	2 cut(s)	1265, 1403
BspTNI	GGTCTC	2 cut(s)	763, 1571
BsrBI	CCGCTC	2 cut(s)	444, 1185
BsrDI	GCAATG	1 cut(s)	1491
BsrFI	RCCGGY	2 cut(s)	140, 343
BsrGI	TGTACA	1 cut(s)	1990
BsrI	ACTGG	4 cut(s)	307, 1650, 1898, 2113
BssAI	RCCGGY	2 cut(s)	140, 343
BssNI	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
BssSI	CACGAG	2 cut(s)	6, 367
BssT1I	CCWWGG	4 cut(s)	474, 492, 647, 1296
Bst2BI	CACGAG	2 cut(s)	6, 367
Bst2UI	CCWGG	4 cut(s)	176, 686, 1153, 2182
Bst4CI	ACNGT	7 cut(s)	317, 607, 994, 1598, 1703, 1874, 2176
Bst6I	CTCTTC	5 cut(s)	977, 1641, 1727, 1856, 2210
BstACI	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
BstAUI	TGTACA	1 cut(s)	1990
BstDEI	CTNAG	9 cut(s)	562, 897, 977, 1014, 1464, 1834, 1971, 2142, 2147
BstDSI	CCRYGG	5 cut(s)	76, 751, 982, 1296, 1689
BstEII	GGTNACC	1 cut(s)	1414
BstF5I	GGATG	4 cut(s)	300, 816, 1425, 2082
BstH2I	RGCGCY	6 cut(s)	656, 692, 775, 1269, 1407, 2036
BstNI	CCWGG	4 cut(s)	176, 686, 1153, 2182
BstNSI	RCATGY	1 cut(s)	1915
BstPAI	GACNNNNGTC	1 cut(s)	201
BstPI	GGTNACC	1 cut(s)	1414
BstSCI	CCNGG	9 cut(s)	174, 290, 684, 1114, 1151, 1418, 1884, 2025, 2180
BstSFI	CTRYAG	2 cut(s)	940, 1818
BstV1I	GCAGC	6 cut(s)	26, 369, 534, 918, 2067, 2140
BstV2I	GAAGAC	1 cut(s)	1537
BstX2I	RGATCY	1 cut(s)	1601
BstXI	CCANNNNNNTGG	1 cut(s)	1297
BstYI	RGATCY	1 cut(s)	1601
Bsu36I	CCTNAGG	1 cut(s)	1464
BtgI	CCRYGG	5 cut(s)	76, 751, 982, 1296, 1689
BtgZI	GCGATG	1 cut(s)	472
BtrI	CACGTC	3 cut(s)	115, 1207, 1801
BtsCI	GGATG	4 cut(s)	300, 816, 1425, 2082
BtsIMutI	CAGTG	2 cut(s)	1643, 1861
BtuMI	TCGCGA	2 cut(s)	1313, 1346
BveI	ACCTGC	1 cut(s)	1532
CaiI	CAGNNNCTG	3 cut(s)	106, 691, 1152
CciI	TCATGA	1 cut(s)	1569
Cfr10I	RCCGGY	2 cut(s)	140, 343
Cfr42I	CCGCGG	2 cut(s)	754, 985
CsiI	ACCWGGT	1 cut(s)	174
Csp6I	GTAC	3 cut(s)	926, 1927, 1991
CviQI	GTAC	3 cut(s)	926, 1927, 1991
DdeI	CTNAG	9 cut(s)	562, 897, 977, 1014, 1464, 1834, 1971, 2142, 2147
DinI	GGCGCC	2 cut(s)	1267, 1405
DraIII	CACNNNGTG	1 cut(s)	178
EaeI	YGGCCR	6 cut(s)	97, 304, 477, 720, 985, 1335
Eam1104I	CTCTTC	5 cut(s)	977, 1641, 1727, 1856, 2210
EarI	CTCTTC	5 cut(s)	977, 1641, 1727, 1856, 2210
EciI	GGCGGA	7 cut(s)	629, 780, 850, 1177, 1222, 1648, 1660
Ecl136II	GAGCTC	1 cut(s)	52
Eco130I	CCWWGG	4 cut(s)	474, 492, 647, 1296
Eco24I	GRGCYC	2 cut(s)	54, 1710
Eco31I	GGTCTC	2 cut(s)	763, 1571
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	9 cut(s)	372, 682, 880, 961, 1087, 1122, 1300, 1963, 2023
Eco53kI	GAGCTC	1 cut(s)	52
Eco57I	CTGAAG	3 cut(s)	128, 1837, 2057
Eco81I	CCTNAGG	1 cut(s)	1464
Eco88I	CYCGRG	4 cut(s)	1245, 1366, 1484, 1711
Eco91I	GGTNACC	1 cut(s)	1414
EcoICRI	GAGCTC	1 cut(s)	52
EcoO109I	RGGNCCY	3 cut(s)	880, 1122, 1963
EcoO65I	GGTNACC	1 cut(s)	1414
EcoRII	CCWGG	4 cut(s)	174, 684, 1151, 2180
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	4 cut(s)	474, 492, 647, 1296
EcoT22I	ATGCAT	1 cut(s)	168
EcoT38I	GRGCYC	2 cut(s)	54, 1710
EgeI	GGCGCC	2 cut(s)	1267, 1405
EheI	GGCGCC	2 cut(s)	1267, 1405
ErhI	CCWWGG	4 cut(s)	474, 492, 647, 1296
Esp3I	CGTCTC	7 cut(s)	114, 323, 787, 1264, 1342, 1363, 2060
FaqI	GGGAC	4 cut(s)	1135, 1286, 1778, 2009
FauI	CCCGC	3 cut(s)	672, 746, 1112
FblI	GTMKAC	1 cut(s)	458
FokI	GGATG	4 cut(s)	307, 803, 1412, 2089
FriOI	GRGCYC	2 cut(s)	54, 1710
FspBI	CTAG	4 cut(s)	408, 648, 1628, 1919
GsaI	CCCAGC	1 cut(s)	2075
GsuI	CTGGAG	1 cut(s)	869
HaeII	RGCGCY	6 cut(s)	656, 692, 775, 1269, 1407, 2036
Hin1I	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	2045
HphI	GGTGA	4 cut(s)	78, 161, 1408, 2053
Hpy166II	GTNNAC	8 cut(s)	243, 300, 366, 459, 805, 928, 1509, 1991
Hpy188I	TCNGA	9 cut(s)	27, 108, 119, 162, 252, 340, 1063, 1097, 1391
Hpy8I	GTNNAC	8 cut(s)	243, 300, 366, 459, 805, 928, 1509, 1991
HpyAV	CCTTC	8 cut(s)	407, 874, 1100, 1507, 1525, 1777, 1856, 2032
HpyCH4III	ACNGT	7 cut(s)	317, 607, 994, 1598, 1703, 1874, 2176
HpyCH4IV	ACGT	7 cut(s)	114, 123, 218, 570, 1206, 1611, 1800
HpyCH4V	TGCA	3 cut(s)	166, 577, 1948
HpyF3I	CTNAG	9 cut(s)	562, 897, 977, 1014, 1464, 1834, 1971, 2142, 2147
HpySE526I	ACGT	7 cut(s)	114, 123, 218, 570, 1206, 1611, 1800
Hsp92I	GRCGYC	7 cut(s)	123, 471, 1266, 1281, 1404, 1533, 1788
KasI	GGCGCC	2 cut(s)	1265, 1403
KflI	GGGWCCC	1 cut(s)	1122
KspI	CCGCGG	2 cut(s)	754, 985
LguI	GCTCTTC	1 cut(s)	1641
LmnI	GCTCC	8 cut(s)	49, 340, 1115, 1190, 1358, 1381, 1769, 2229
Lsp1109I	GCAGC	6 cut(s)	26, 369, 534, 918, 2067, 2140
LweI	GCATC	4 cut(s)	153, 175, 495, 588
MabI	ACCWGGT	1 cut(s)	174
MaeI	CTAG	4 cut(s)	408, 648, 1628, 1919
MaeII	ACGT	7 cut(s)	114, 123, 218, 570, 1206, 1611, 1800
MaeIII	GTNAC	7 cut(s)	84, 219, 1414, 1771, 1874, 1914, 2137
MbiI	CCGCTC	2 cut(s)	444, 1185
MflI	RGATCY	1 cut(s)	1601
MhlI	GDGCHC	5 cut(s)	54, 183, 237, 435, 1710
MlsI	TGGCCA	2 cut(s)	306, 479
MluCI	AATT	1 cut(s)	2158
MluNI	TGGCCA	2 cut(s)	306, 479
Mly113I	GGCGCC	2 cut(s)	1266, 1404
MlyI	GAGTC	9 cut(s)	151, 211, 454, 548, 610, 845, 1052, 1479, 2134
MmeI	TCCRAC	2 cut(s)	97, 318
Mox20I	TGGCCA	2 cut(s)	306, 479
Mph1103I	ATGCAT	1 cut(s)	168
MscI	TGGCCA	2 cut(s)	306, 479
MslI	CAYNNNNRTG	1 cut(s)	1568
Msp20I	TGGCCA	2 cut(s)	306, 479
MspA1I	CMGCKG	6 cut(s)	753, 889, 984, 1002, 2014, 2146
MspR9I	CCNGG	9 cut(s)	176, 292, 686, 1116, 1153, 1420, 1886, 2027, 2182
Mva1269I	GAATGC	1 cut(s)	1380
MvaI	CCWGG	4 cut(s)	176, 686, 1153, 2182
NarI	GGCGCC	2 cut(s)	1266, 1404
NciI	CCSGG	5 cut(s)	292, 1116, 1420, 1886, 2027
NcoI	CCATGG	1 cut(s)	1296
NmeAIII	GCCGAG	9 cut(s)	75, 300, 414, 658, 684, 960, 1060, 1380, 1788
NmuCI	GTSAC	6 cut(s)	84, 219, 1414, 1771, 1914, 2137
NruI	TCGCGA	2 cut(s)	1313, 1346
NsiI	ATGCAT	1 cut(s)	168
NspI	RCATGY	1 cut(s)	1915
PaeR7I	CTCGAG	1 cut(s)	1366
PagI	TCATGA	1 cut(s)	1569
PaqCI	CACCTGC	1 cut(s)	1532
PciI	ACATGT	1 cut(s)	1911
PciSI	GCTCTTC	1 cut(s)	1641
PcsI	WCGNNNNNNNCGW	6 cut(s)	120, 189, 224, 1335, 1539, 1797
PctI	GAATGC	1 cut(s)	1380
PfeI	GAWTC	8 cut(s)	22, 268, 792, 945, 1392, 1447, 1881, 2200
PflFI	GACNNNGTC	2 cut(s)	334, 800
PflMI	CCANNNNNTGG	1 cut(s)	1443
PfoI	TCCNGGA	2 cut(s)	290, 1884
PleI	GAGTC	9 cut(s)	151, 210, 454, 547, 610, 845, 1052, 1478, 2134
PluTI	GGCGCC	2 cut(s)	1269, 1407
PpsI	GAGTC	9 cut(s)	151, 210, 454, 547, 610, 845, 1052, 1478, 2134
PpuMI	RGGWCCY	3 cut(s)	880, 1122, 1963
PscI	ACATGT	1 cut(s)	1911
PshAI	GACNNNNGTC	1 cut(s)	201
Psp124BI	GAGCTC	1 cut(s)	54
Psp5II	RGGWCCY	3 cut(s)	880, 1122, 1963
Psp6I	CCWGG	4 cut(s)	174, 684, 1151, 2180
PspEI	GGTNACC	1 cut(s)	1414
PspFI	CCCAGC	1 cut(s)	2071
PspGI	CCWGG	4 cut(s)	174, 684, 1151, 2180
PspPPI	RGGWCCY	3 cut(s)	880, 1122, 1963
PstNI	CAGNNNCTG	3 cut(s)	106, 691, 1152
PsuI	RGATCY	1 cut(s)	1601
PsyI	GACNNNGTC	2 cut(s)	334, 800
PvuII	CAGCTG	1 cut(s)	2146
RruI	TCGCGA	2 cut(s)	1313, 1346
RsaI	GTAC	3 cut(s)	927, 1928, 1992
RsaNI	GTAC	3 cut(s)	926, 1927, 1991
RseI	CAYNNNNRTG	1 cut(s)	1568
SacI	GAGCTC	1 cut(s)	54
SacII	CCGCGG	2 cut(s)	754, 985
SalI	GTCGAC	1 cut(s)	457
SapI	GCTCTTC	1 cut(s)	1641
SchI	GAGTC	9 cut(s)	151, 211, 454, 548, 610, 845, 1052, 1479, 2134
ScrFI	CCNGG	9 cut(s)	176, 292, 686, 1116, 1153, 1420, 1886, 2027, 2182
SduI	GDGCHC	5 cut(s)	54, 183, 237, 435, 1710
SexAI	ACCWGGT	1 cut(s)	174
SfaNI	GCATC	4 cut(s)	153, 175, 495, 588
SfcI	CTRYAG	2 cut(s)	940, 1818
SfoI	GGCGCC	2 cut(s)	1267, 1405
Sfr274I	CTCGAG	1 cut(s)	1366
Sfr303I	CCGCGG	2 cut(s)	754, 985
SgrAI	CRCCGGYG	1 cut(s)	140
SgrBI	CCGCGG	2 cut(s)	754, 985
SinI	GGWCC	9 cut(s)	372, 682, 880, 961, 1087, 1122, 1300, 1963, 2023
SlaI	CTCGAG	1 cut(s)	1366
SmiMI	CAYNNNNRTG	1 cut(s)	1568
SmlI	CTYRAG	1 cut(s)	1366
SmoI	CTYRAG	1 cut(s)	1366
SpeI	ACTAGT	1 cut(s)	1918
Sse9I	AATT	1 cut(s)	2158
SspDI	GGCGCC	2 cut(s)	1265, 1403
SspMI	CTAG	4 cut(s)	408, 648, 1628, 1919
SstI	GAGCTC	1 cut(s)	54
StyD4I	CCNGG	9 cut(s)	174, 290, 684, 1114, 1151, 1418, 1884, 2025, 2180
StyI	CCWWGG	4 cut(s)	474, 492, 647, 1296
TaaI	ACNGT	7 cut(s)	317, 607, 994, 1598, 1703, 1874, 2176
TaiI	ACGT	7 cut(s)	117, 126, 221, 573, 1209, 1614, 1803
TaqII	GACCGA	1 cut(s)	2011
TasI	AATT	1 cut(s)	2158
TatI	WGTACW	1 cut(s)	1990
TfiI	GAWTC	8 cut(s)	22, 268, 792, 945, 1392, 1447, 1881, 2200
TscAI	CASTG	2 cut(s)	1650, 1861
TseFI	GTSAC	6 cut(s)	84, 219, 1414, 1771, 1914, 2137
TseI	GCWGC	6 cut(s)	14, 382, 547, 906, 2055, 2128
Tsp45I	GTSAC	6 cut(s)	84, 219, 1414, 1771, 1914, 2137
TspDTI	ATGAA	8 cut(s)	203, 856, 1178, 1373, 1480, 1558, 1855, 2093
TspGWI	ACGGA	3 cut(s)	116, 216, 913
TspRI	CASTG	2 cut(s)	1650, 1861
Tth111I	GACNNNGTC	2 cut(s)	334, 800
Van91I	CCANNNNNTGG	1 cut(s)	1443
VpaK11BI	GGWCC	9 cut(s)	372, 682, 880, 961, 1087, 1122, 1300, 1963, 2023
XceI	RCATGY	1 cut(s)	1915
XhoI	CTCGAG	1 cut(s)	1366
XmaJI	CCTAGG	1 cut(s)	647
XmiI	GTMKAC	1 cut(s)	458
XspI	CTAG	4 cut(s)	408, 648, 1628, 1919
ZraI	GACGTC	1 cut(s)	124
Zsp2I	ATGCAT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.