Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0009902

Physical Location & Seq

Genomic Coordinates Forward (+)

11783763 .. 11786944

Gene Structure 3182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027449

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTCTCGTGTAGCAGCAGAGAATCTGATATCGCCGTTCTCTATGGAGCTCGACGACTTCCCACGAACCTCCCACGGCGCGTCACCCTCACTCGGCCAGCTTCTGAAGCACGTCGGAGATGTCCGCAAGGAGGCCACCGGAGACGGCGGCGAGACTCCGATGCATCACCACCAGGTGCTCGACATGAGCGACGAGAGTCTTGAAAACCCTAGGTCGCTTCCGTTCGTGCTCTCGTTCACTAACCTGACTTACAGCGTCAAGATTCGCCGGAAGTTCAGTCTTTCAGGGATGCTTACTGGTCAGAGAAACCGTCTCGGCGCGGCGACTCTGTCGGAGCCGGTAGGAGGAGAGAGCCTGTTCACGAGGTCCAAGATGCTGCTGAAAGACATCTCCGGCGAGGCTAGAGAAGGAGAAGTGCTGGCGGTGCTCGGAGCCAGCGGTTCCGGCAAGTCGACCCTCATCGACGCCTTGGCCAATCGCATCGCCAAGGGAAGCCTGAAAGGAAAGGTCAGCCTCAACGGCGAGGTCCTGGAGTCGCGGCTGCTCAAAGTGATCTCAGCTTACGTCATGCAGGATGATCTGCTATTCCCGATGCTGACGGTGGAGGAAACGCTCATGTTCGCCGCCGAGTTCCGCCTCCCCAGGGCGCTTTCGAAATCCAAGAAGAAAATGCGGGTCCAGGCGCTGATAGACCAGCTCGGCCTCCGCAACGCGGCCAGCACCATCATCGGAGACGAGGGCCACCGCGGCGTCTCCGGCGGAGAGCGCCGCCGCGTCTCGATCGGAATCGACATCGTCCACGACCCGATCATCCTCTTCCTCGACGAGCCGACCTCCGGCCTCGACTCCACCTCCGCCTTCATGGTCGTCAAGGTCCTCCAGCGGATCGCTCAGTCCGGCAGCATTGTGGTCATGTCCGTACACCAGCCGAGCTACAGAATCTTGGGCCTGCTGGACCGGCTTCTCTTCCTCAGCCGCGGCCAAACCGTTTTCAGCGGCTCGCCAGCTCAGCTTCCCTCCTACTTCGCGGAGTTCGGGCGGCCCATACCCAACTCCGAAAACAAAACCGAGTTCGCTCTGGACCTGATCCGAGAACTTGAAGGCTCCCCCGGCGGGACCCAAGCCCTCGTCGAGTTCAACAACTCCTGGCAGACCATGAAGCACAGCGCTCATTACCGCTCCGCTACCGACATACGACACGTCGTTCCCCTCCAAGAAGCCATCTCCGCCAGCATTTCCCGAGGAAAGCTCGTCTCCGGGGCCACCAACAACGACGCCAGCCCAAACTCCATGGTCCCCACCTTCGCCAACCCCATCTGGATCGAAATGGCCGTCCTCGCGAGACGCTCCATGAAAAACTCGAGACGAATGCCGGAGCTGTTCGGAATCCGGCTCGGCGCCGTTGTGGTCACCGGGTTCATCCTCGCCACCATGTTCTGGAATCTCGATAATACCCCTAAGGGAGTCCAAGAACGCCTCGGATTCATTGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCCGACGCCTTACCCGTCTTCCTCCAAGAACGCTACATCTTCATGAGAGAGACGGCCTACAATGCCTACCGTAGATCTTCCTACGTTCTTTCACACTCTCTAGTGGCTCTTCCGGCGCTGGTTTTCCTCTCCGCCGCCTTCTCCGCCATCACATTCTGGGCCGTGGGCCTCGACGGCGGGCTCTCGGGGTTCCTATTCTACTTCCTCATCATCTTCGCCTCGTTCTGGGCCGGAAGCTCATTCGTCACATTCCTCTCCGGCGTTGTCCCCCACGTCATGCTCGGCTACACTATAGTCGTGGCAATCTTAGCCTACTTCCTTCTCTTCAGTGGCTTCTTCATAAACCGGAACAGAATCCCGGACTACTGGATTTGGTTCCACTACATGTCACTAGTGAAGTACCCCTACGAGGCTGTAATGCAGAACGAGTTTCAGGACCCGACTAAGTGCTTCGTGAGGGGTGTACAGATATTTGATAATACTCCCCTGGCTTCGGTCCCGGCGGCGCTGAAGGTGAAGCTTCTGGGCAGCATGAGCGAGACGCTGGGGATGACGATTACGAGGACGACTTGCTTGACGACTGGGAGTGATTTATTGAAGCAGCAGGGAGTGACTCAGCTGAGCAAGTGGAATTGCTTGTGGATCACGGTGGCCTGGGGGTTTCTGTTCAGGATTCTCTTCTATTTTTCGTTGCTGATTGGGAGCAAGAACAAGAGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043207 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

748

Amino Acids

82.63

Weight (kDa)

9.43

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	127 - 279	7.1e-26	ABC transporter
ABC2_membrane_7	PF19055	308 - 407	3.9e-06	ABC-2 type transporter
ABC2_membrane	PF01061	444 - 651	5.5e-49	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39350 AT3G55090 AT5G13580
fragaria_vesca	FvH4_7g20800
malus_domestica	MD01G1117400.v1.1 MD07G1184900.v1.1
prunus_persica	Prupe.2G224800_v2.0.a1
pyrus_communis	pycom01g14510 pycom07g17710
rosa_chinensis	RchiOBHm_Chr1g0365031
rosa_laevigata	RLG00000027449
rosa_multiflora	Rmu_co8341207.1_g000001 Rmu_ssc0000112.1_g000014
rosa_roxburghii	Rroxscaffold_4G00291530 Rroxscaffold_4G00291980
rosa_rugosa	Rorug01G0319000
rosa_samantha	Rh1AG328100 Rh1BG289500 Rh1CG306100 Rh1DG320900
rosa_wichuraiana	Rw1G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1526
Acc36I	ACCTGC	1 cut(s)	1526
AccB1I	GGYRCC	1 cut(s)	1397
AccB7I	CCANNNNNTGG	1 cut(s)	1437
AccBSI	CCGCTC	1 cut(s)	1179
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
AclWI	GGATC	4 cut(s)	893, 1081, 1328, 2171
AcoI	YGGCCR	5 cut(s)	94, 471, 714, 979, 1329
AcuI	CTGAAG	3 cut(s)	125, 1831, 2051
AcyI	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
AdeI	CACNNNGTG	1 cut(s)	175
AfaI	GTAC	3 cut(s)	921, 1922, 1986
AfeI	AGCGCT	1 cut(s)	1168
AflIII	ACRYGT	2 cut(s)	1198, 1905
AgsI	TTSAA	4 cut(s)	203, 1100, 1138, 2119
AhlI	ACTAGT	1 cut(s)	1912
AjiI	CACGTC	3 cut(s)	112, 1201, 1795
AjnI	CCWGG	7 cut(s)	171, 528, 641, 678, 1145, 2007, 2174
Alw21I	GWGCWC	4 cut(s)	51, 180, 231, 429
AlwI	GGATC	4 cut(s)	893, 1081, 1328, 2171
AlwNI	CAGNNNCTG	2 cut(s)	103, 685
Ama87I	CYCGRG	3 cut(s)	1239, 1360, 1705
Aor51HI	AGCGCT	1 cut(s)	1168
ApeKI	GCWGC	6 cut(s)	14, 376, 541, 900, 2049, 2122
ArsI	GACNNNNNNTTYG	2 cut(s)	1317, 1349
AspA2I	CCTAGG	1 cut(s)	209
AsuC2I	CCSGG	5 cut(s)	1110, 1258, 1414, 1880, 2021
AsuHPI	GGTGA	4 cut(s)	75, 158, 1402, 2047
AsuII	TTCGAA	1 cut(s)	653
AvaI	CYCGRG	3 cut(s)	1239, 1360, 1705
AvrII	CCTAGG	1 cut(s)	209
AxyI	CCTNAGG	1 cut(s)	1458
BalI	TGGCCA	1 cut(s)	473
BanI	GGYRCC	1 cut(s)	1397
BanII	GRGCYC	2 cut(s)	51, 1704
BarI	GAAGNNNNNNTAC	2 cut(s)	1910, 1942
BauI	CACGAG	2 cut(s)	6, 361
BbsI	GAAGAC	1 cut(s)	1531
Bbv12I	GWGCWC	4 cut(s)	51, 180, 231, 429
BbvCI	CCTCAGC	1 cut(s)	971
BbvI	GCAGC	6 cut(s)	26, 363, 528, 912, 2061, 2134
BccI	CCATC	4 cut(s)	731, 1229, 1322, 1676
BceAI	ACGGC	9 cut(s)	19, 91, 160, 535, 1316, 1385, 1590, 1667, 1711
BcgI	CGANNNNNNTGC	4 cut(s)	709, 743, 1351, 1385
BciT130I	CCWGG	7 cut(s)	173, 530, 643, 680, 1147, 2009, 2176
BcnI	CCSGG	5 cut(s)	1110, 1258, 1414, 1880, 2021
BcuI	ACTAGT	1 cut(s)	1912
BfaI	CTAG	4 cut(s)	210, 402, 1622, 1913
BfmI	CTRYAG	2 cut(s)	934, 1812
BfoI	RGCGCY	7 cut(s)	650, 686, 769, 1170, 1401, 1640, 2030
BfuAI	ACCTGC	1 cut(s)	1526
BglI	GCCNNNNNGGC	3 cut(s)	519, 747, 1695
BglII	AGATCT	1 cut(s)	1595
BlnI	CCTAGG	1 cut(s)	209
BlpI	GCTNAGC	2 cut(s)	1008, 2141
BmeT110I	CYCGRG	3 cut(s)	1239, 1360, 1705
BmgBI	CACGTC	3 cut(s)	112, 1201, 1795
BmrI	ACTGGG	1 cut(s)	2112
BmsI	GCATC	6 cut(s)	150, 172, 279, 363, 489, 582
BmuI	ACTGGG	1 cut(s)	2112
BoxI	GACNNNNGTC	1 cut(s)	195
BpiI	GAAGAC	1 cut(s)	1531
BplI	GAGNNNNNCTC	4 cut(s)	818, 850, 1233, 1265
BpmI	CTGGAG	2 cut(s)	551, 863
Bpu10I	CCTNAGC	1 cut(s)	971
Bpu1102I	GCTNAGC	2 cut(s)	1008, 2141
Bpu14I	TTCGAA	1 cut(s)	653
BpuMI	CCSGG	5 cut(s)	1110, 1258, 1414, 1880, 2021
BsaBI	GATNNNNATC	1 cut(s)	785
BsaHI	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
BsaWI	WCCGGW	2 cut(s)	137, 1866
BsaXI	ACNNNNNCTCC	2 cut(s)	836, 866
Bse118I	RCCGGY	2 cut(s)	337, 957
Bse1I	ACTGG	3 cut(s)	301, 1892, 2107
Bse21I	CCTNAGG	1 cut(s)	1458
Bse3DI	GCAATG	1 cut(s)	1485
Bse8I	GATNNNNATC	1 cut(s)	785
BseBI	CCWGG	7 cut(s)	173, 530, 643, 680, 1147, 2009, 2176
BseGI	GGATG	5 cut(s)	294, 580, 810, 1419, 2076
BseJI	GATNNNNATC	1 cut(s)	785
BseMI	GCAATG	1 cut(s)	1485
BseMII	CTCAG	6 cut(s)	570, 905, 985, 1022, 2132, 2150
BseNI	ACTGG	3 cut(s)	301, 1892, 2107
BseRI	GAGGAG	1 cut(s)	360
BseXI	GCAGC	6 cut(s)	26, 363, 528, 912, 2061, 2134
BseYI	CCCAGC	1 cut(s)	2065
Bsh1236I	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
Bsh1285I	CGRYCG	1 cut(s)	783
BshNI	GGYRCC	1 cut(s)	1397
BsiEI	CGRYCG	1 cut(s)	783
BsiHKAI	GWGCWC	4 cut(s)	51, 180, 231, 429
BsiHKCI	CYCGRG	3 cut(s)	1239, 1360, 1705
BslFI	GGGAC	4 cut(s)	1129, 1280, 1772, 2003
BsmFI	GGGAC	4 cut(s)	1129, 1280, 1772, 2003
BsmI	GAATGC	1 cut(s)	1374
BsoBI	CYCGRG	3 cut(s)	1239, 1360, 1705
Bsp119I	TTCGAA	1 cut(s)	653
Bsp1286I	GDGCHC	5 cut(s)	51, 180, 231, 429, 1704
Bsp1407I	TGTACA	1 cut(s)	1984
Bsp143I	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
Bsp1720I	GCTNAGC	2 cut(s)	1008, 2141
Bsp19I	CCATGG	1 cut(s)	1290
Bsp68I	TCGCGA	1 cut(s)	1340
BspCNI	CTCAG	6 cut(s)	569, 904, 984, 1021, 2133, 2149
BspFNI	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
BspHI	TCATGA	1 cut(s)	1563
BspMI	ACCTGC	1 cut(s)	1526
BspPI	GGATC	4 cut(s)	893, 1081, 1328, 2171
BspQI	GCTCTTC	1 cut(s)	1635
BspT104I	TTCGAA	1 cut(s)	653
BspT107I	GGYRCC	1 cut(s)	1397
BsrBI	CCGCTC	1 cut(s)	1179
BsrDI	GCAATG	1 cut(s)	1485
BsrFI	RCCGGY	2 cut(s)	337, 957
BsrGI	TGTACA	1 cut(s)	1984
BsrI	ACTGG	3 cut(s)	301, 1892, 2107
BssAI	RCCGGY	2 cut(s)	337, 957
BssMI	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
BssNI	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
BssSI	CACGAG	2 cut(s)	6, 361
BssT1I	CCWWGG	4 cut(s)	209, 468, 486, 1290
Bst2BI	CACGAG	2 cut(s)	6, 361
Bst2UI	CCWGG	7 cut(s)	173, 530, 643, 680, 1147, 2009, 2176
Bst4CI	ACNGT	5 cut(s)	311, 601, 988, 1592, 2170
Bst6I	CTCTTC	5 cut(s)	821, 971, 1635, 1850, 2204
BstACI	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
BstAUI	TGTACA	1 cut(s)	1984
BstBI	TTCGAA	1 cut(s)	653
BstDEI	CTNAG	9 cut(s)	556, 891, 971, 1008, 1458, 1828, 1965, 2136, 2141
BstDSI	CCRYGG	5 cut(s)	73, 745, 976, 1290, 1683
BstEII	GGTNACC	1 cut(s)	1408
BstF5I	GGATG	5 cut(s)	294, 580, 810, 1419, 2076
BstFNI	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
BstH2I	RGCGCY	7 cut(s)	650, 686, 769, 1170, 1401, 1640, 2030
BstKTI	GATC	9 cut(s)	555, 580, 783, 810, 888, 1089, 1323, 1598, 2166
BstMBI	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
BstMCI	CGRYCG	1 cut(s)	783
BstNI	CCWGG	7 cut(s)	173, 530, 643, 680, 1147, 2009, 2176
BstNSI	RCATGY	1 cut(s)	1909
BstPAI	GACNNNNGTC	1 cut(s)	195
BstPI	GGTNACC	1 cut(s)	1408
BstSFI	CTRYAG	2 cut(s)	934, 1812
BstUI	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
BstV1I	GCAGC	6 cut(s)	26, 363, 528, 912, 2061, 2134
BstV2I	GAAGAC	1 cut(s)	1531
BstX2I	RGATCY	1 cut(s)	1595
BstYI	RGATCY	1 cut(s)	1595
Bsu36I	CCTNAGG	1 cut(s)	1458
BtgI	CCRYGG	5 cut(s)	73, 745, 976, 1290, 1683
BtgZI	GCGATG	1 cut(s)	466
BtrI	CACGTC	3 cut(s)	112, 1201, 1795
BtsCI	GGATG	5 cut(s)	294, 580, 810, 1419, 2076
BtsIMutI	CAGTG	1 cut(s)	1855
BtuMI	TCGCGA	1 cut(s)	1340
BveI	ACCTGC	1 cut(s)	1526
CaiI	CAGNNNCTG	2 cut(s)	103, 685
CciI	TCATGA	1 cut(s)	1563
Cfr10I	RCCGGY	2 cut(s)	337, 957
Cfr42I	CCGCGG	2 cut(s)	748, 979
CseI	GACGC	9 cut(s)	69, 244, 473, 739, 763, 1283, 1353, 1535, 2071
CsiI	ACCWGGT	1 cut(s)	171
Csp6I	GTAC	3 cut(s)	920, 1921, 1985
CviQI	GTAC	3 cut(s)	920, 1921, 1985
DdeI	CTNAG	9 cut(s)	556, 891, 971, 1008, 1458, 1828, 1965, 2136, 2141
DinI	GGCGCC	1 cut(s)	1399
DpnI	GATC	9 cut(s)	554, 579, 782, 809, 887, 1088, 1322, 1597, 2165
DpnII	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
DraIII	CACNNNGTG	1 cut(s)	175
EaeI	YGGCCR	5 cut(s)	94, 471, 714, 979, 1329
Eam1104I	CTCTTC	5 cut(s)	821, 971, 1635, 1850, 2204
EarI	CTCTTC	5 cut(s)	821, 971, 1635, 1850, 2204
EciI	GGCGGA	6 cut(s)	623, 774, 844, 1216, 1642, 1654
Ecl136II	GAGCTC	1 cut(s)	49
Eco130I	CCWWGG	4 cut(s)	209, 468, 486, 1290
Eco24I	GRGCYC	2 cut(s)	51, 1704
Eco32I	GATATC	1 cut(s)	30
Eco47III	AGCGCT	1 cut(s)	1168
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	3 cut(s)	125, 1831, 2051
Eco81I	CCTNAGG	1 cut(s)	1458
Eco88I	CYCGRG	3 cut(s)	1239, 1360, 1705
Eco91I	GGTNACC	1 cut(s)	1408
EcoICRI	GAGCTC	1 cut(s)	49
EcoO109I	RGGNCCY	4 cut(s)	526, 874, 1116, 1957
EcoO65I	GGTNACC	1 cut(s)	1408
EcoRII	CCWGG	7 cut(s)	171, 528, 641, 678, 1145, 2007, 2174
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	4 cut(s)	209, 468, 486, 1290
EcoT22I	ATGCAT	1 cut(s)	165
EcoT38I	GRGCYC	2 cut(s)	51, 1704
EgeI	GGCGCC	1 cut(s)	1399
EheI	GGCGCC	1 cut(s)	1399
ErhI	CCWWGG	4 cut(s)	209, 468, 486, 1290
FaqI	GGGAC	4 cut(s)	1129, 1280, 1772, 2003
FauI	CCCGC	3 cut(s)	666, 1106, 1691
FblI	GTMKAC	1 cut(s)	452
FokI	GGATG	5 cut(s)	301, 587, 797, 1406, 2083
FriOI	GRGCYC	2 cut(s)	51, 1704
FspBI	CTAG	4 cut(s)	210, 402, 1622, 1913
GsaI	CCCAGC	1 cut(s)	2069
GsuI	CTGGAG	2 cut(s)	551, 863
HaeII	RGCGCY	7 cut(s)	650, 686, 769, 1170, 1401, 1640, 2030
HgaI	GACGC	9 cut(s)	69, 244, 473, 739, 763, 1283, 1353, 1535, 2071
Hin1I	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
HincII	GTYRAC	1 cut(s)	453
HindII	GTYRAC	1 cut(s)	453
HindIII	AAGCTT	1 cut(s)	2039
HphI	GGTGA	4 cut(s)	75, 158, 1402, 2047
Hpy166II	GTNNAC	7 cut(s)	237, 360, 453, 799, 922, 1503, 1985
Hpy8I	GTNNAC	7 cut(s)	237, 360, 453, 799, 922, 1503, 1985
HpyAV	CCTTC	9 cut(s)	401, 868, 1094, 1312, 1501, 1519, 1669, 1850, 2026
HpyCH4III	ACNGT	5 cut(s)	311, 601, 988, 1592, 2170
HpyCH4IV	ACGT	5 cut(s)	111, 564, 1200, 1605, 1794
HpyCH4V	TGCA	3 cut(s)	163, 571, 1942
HpyF3I	CTNAG	9 cut(s)	556, 891, 971, 1008, 1458, 1828, 1965, 2136, 2141
HpySE526I	ACGT	5 cut(s)	111, 564, 1200, 1605, 1794
Hsp92I	GRCGYC	5 cut(s)	465, 750, 1275, 1398, 1527
KasI	GGCGCC	1 cut(s)	1397
KflI	GGGWCCC	1 cut(s)	1116
KspI	CCGCGG	2 cut(s)	748, 979
Kzo9I	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
LguI	GCTCTTC	1 cut(s)	1635
LmnI	GCTCC	8 cut(s)	46, 334, 431, 1109, 1184, 1352, 1375, 2223
Lsp1109I	GCAGC	6 cut(s)	26, 363, 528, 912, 2061, 2134
LweI	GCATC	6 cut(s)	150, 172, 279, 363, 489, 582
MabI	ACCWGGT	1 cut(s)	171
MaeI	CTAG	4 cut(s)	210, 402, 1622, 1913
MaeII	ACGT	5 cut(s)	111, 564, 1200, 1605, 1794
MaeIII	GTNAC	5 cut(s)	81, 1408, 1765, 1908, 2131
MalI	GATC	9 cut(s)	554, 579, 782, 809, 887, 1088, 1322, 1597, 2165
MbiI	CCGCTC	1 cut(s)	1179
MboI	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
MflI	RGATCY	1 cut(s)	1595
MhlI	GDGCHC	5 cut(s)	51, 180, 231, 429, 1704
MlsI	TGGCCA	1 cut(s)	473
MluCI	AATT	1 cut(s)	2152
MluNI	TGGCCA	1 cut(s)	473
Mly113I	GGCGCC	1 cut(s)	1398
MlyI	GAGTC	7 cut(s)	148, 205, 319, 542, 839, 1473, 2128
MmeI	TCCRAC	2 cut(s)	94, 312
Mox20I	TGGCCA	1 cut(s)	473
Mph1103I	ATGCAT	1 cut(s)	165
MscI	TGGCCA	1 cut(s)	473
MslI	CAYNNNNRTG	1 cut(s)	1562
Msp20I	TGGCCA	1 cut(s)	473
MspA1I	CMGCKG	6 cut(s)	438, 747, 883, 978, 996, 2140
Mva1269I	GAATGC	1 cut(s)	1374
MvaI	CCWGG	7 cut(s)	173, 530, 643, 680, 1147, 2009, 2176
MvnI	CGCG	9 cut(s)	80, 320, 538, 713, 747, 774, 978, 1028, 1340
NarI	GGCGCC	1 cut(s)	1398
NciI	CCSGG	5 cut(s)	1110, 1258, 1414, 1880, 2021
NcoI	CCATGG	1 cut(s)	1290
NdeII	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
NmeAIII	GCCGAG	7 cut(s)	72, 294, 652, 678, 954, 1374, 1782
NmuCI	GTSAC	5 cut(s)	81, 1408, 1765, 1908, 2131
NruI	TCGCGA	1 cut(s)	1340
NsiI	ATGCAT	1 cut(s)	165
NspI	RCATGY	1 cut(s)	1909
NspV	TTCGAA	1 cut(s)	653
PaeR7I	CTCGAG	1 cut(s)	1360
PagI	TCATGA	1 cut(s)	1563
PaqCI	CACCTGC	1 cut(s)	1526
PasI	CCCWGGG	1 cut(s)	642
PciI	ACATGT	1 cut(s)	1905
PciSI	GCTCTTC	1 cut(s)	1635
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 1329, 1533
PctI	GAATGC	1 cut(s)	1374
PfeI	GAWTC	9 cut(s)	22, 262, 786, 939, 1386, 1441, 1482, 1875, 2194
PflFI	GACNNNGTC	2 cut(s)	328, 794
PflMI	CCANNNNNTGG	1 cut(s)	1437
PfoI	TCCNGGA	2 cut(s)	528, 1878
Ple19I	CGATCG	1 cut(s)	783
PleI	GAGTC	7 cut(s)	148, 204, 319, 541, 839, 1472, 2128
PluTI	GGCGCC	1 cut(s)	1401
PpsI	GAGTC	7 cut(s)	148, 204, 319, 541, 839, 1472, 2128
PpuMI	RGGWCCY	4 cut(s)	526, 874, 1116, 1957
PscI	ACATGT	1 cut(s)	1905
PshAI	GACNNNNGTC	1 cut(s)	195
Psp124BI	GAGCTC	1 cut(s)	51
Psp5II	RGGWCCY	4 cut(s)	526, 874, 1116, 1957
Psp6I	CCWGG	7 cut(s)	171, 528, 641, 678, 1145, 2007, 2174
PspEI	GGTNACC	1 cut(s)	1408
PspFI	CCCAGC	1 cut(s)	2065
PspGI	CCWGG	7 cut(s)	171, 528, 641, 678, 1145, 2007, 2174
PspPPI	RGGWCCY	4 cut(s)	526, 874, 1116, 1957
PstNI	CAGNNNCTG	2 cut(s)	103, 685
PsuI	RGATCY	1 cut(s)	1595
PsyI	GACNNNGTC	2 cut(s)	328, 794
PvuI	CGATCG	1 cut(s)	783
PvuII	CAGCTG	1 cut(s)	2140
RruI	TCGCGA	1 cut(s)	1340
RsaI	GTAC	3 cut(s)	921, 1922, 1986
RsaNI	GTAC	3 cut(s)	920, 1921, 1985
RseI	CAYNNNNRTG	1 cut(s)	1562
SacI	GAGCTC	1 cut(s)	51
SacII	CCGCGG	2 cut(s)	748, 979
SalI	GTCGAC	1 cut(s)	451
SapI	GCTCTTC	1 cut(s)	1635
Sau3AI	GATC	9 cut(s)	552, 577, 780, 807, 885, 1086, 1320, 1595, 2163
SchI	GAGTC	7 cut(s)	148, 205, 319, 542, 839, 1473, 2128
SduI	GDGCHC	5 cut(s)	51, 180, 231, 429, 1704
SexAI	ACCWGGT	1 cut(s)	171
SfaNI	GCATC	6 cut(s)	150, 172, 279, 363, 489, 582
SfcI	CTRYAG	2 cut(s)	934, 1812
SfoI	GGCGCC	1 cut(s)	1399
Sfr274I	CTCGAG	1 cut(s)	1360
Sfr303I	CCGCGG	2 cut(s)	748, 979
SfuI	TTCGAA	1 cut(s)	653
SgrBI	CCGCGG	2 cut(s)	748, 979
SlaI	CTCGAG	1 cut(s)	1360
SmiMI	CAYNNNNRTG	1 cut(s)	1562
SmlI	CTYRAG	1 cut(s)	1360
SmoI	CTYRAG	1 cut(s)	1360
SpeI	ACTAGT	1 cut(s)	1912
Sse9I	AATT	1 cut(s)	2152
SspDI	GGCGCC	1 cut(s)	1397
SspMI	CTAG	4 cut(s)	210, 402, 1622, 1913
SstI	GAGCTC	1 cut(s)	51
StyI	CCWWGG	4 cut(s)	209, 468, 486, 1290
TaaI	ACNGT	5 cut(s)	311, 601, 988, 1592, 2170
TaiI	ACGT	5 cut(s)	114, 567, 1203, 1608, 1797
TaqII	GACCGA	1 cut(s)	2005
TasI	AATT	1 cut(s)	2152
TatI	WGTACW	1 cut(s)	1984
TfiI	GAWTC	9 cut(s)	22, 262, 786, 939, 1386, 1441, 1482, 1875, 2194
TscAI	CASTG	1 cut(s)	1855
TseFI	GTSAC	5 cut(s)	81, 1408, 1765, 1908, 2131
TseI	GCWGC	6 cut(s)	14, 376, 541, 900, 2049, 2122
Tsp45I	GTSAC	5 cut(s)	81, 1408, 1765, 1908, 2131
TspDTI	ATGAA	7 cut(s)	850, 1172, 1367, 1408, 1474, 1552, 1849
TspGWI	ACGGA	2 cut(s)	210, 907
TspRI	CASTG	1 cut(s)	1855
Tth111I	GACNNNGTC	2 cut(s)	328, 794
Van91I	CCANNNNNTGG	1 cut(s)	1437
XceI	RCATGY	1 cut(s)	1909
XhoI	CTCGAG	1 cut(s)	1360
XmaJI	CCTAGG	1 cut(s)	209
XmiI	GTMKAC	1 cut(s)	452
XspI	CTAG	4 cut(s)	210, 402, 1622, 1913
Zsp2I	ATGCAT	1 cut(s)	165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.