Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009902

Physical Location & Seq

Genomic Coordinates Reverse (-)

26610752 .. 26614145

Gene Structure 3394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1184900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGTCGTCTCGCGTGGCGGACAATCAGATATCGCCGTTTTTCACTTCCATGGAGCTAGACGACTTCCCACGCGCCACCCACGGCGCTTCGCCCTCGCTCGGCCAGCTACTGAAGCATGTTGGTGATGTACGTAAGGAGGCCACTGGCGACGGCGGCGAGACTCCGGCACACCACGCACTCGACATCTCCGAAGCCAGCCTCGAGCCTCGCTCCTTGCCATTCGTCCTCTCCTTTAACAACCTGACGTATAGTGTCAAGGTCCGCCGCAAGTTCAGCTTGTCCGGGATGTTATCCGGCTGCAATAACCGACTCAGCGCCGCCACGGCTTCCGACCCCATCAGCGGTGGAGAGAATTTTTTCTCCAAGACGAGGACGCTGCTCAATGACATCTCAGGAGAAGCGCGCGAGGGCGAGATTCTTGCTGTTCTCGGCGCGAGCGGCTCGGGTAAATCCACCTTGATCGACGCCTTGGCGAATCGGATAGCGAAGGGCAGCTTGAAAGGCACCGTCAGCTTAAACGGCGAGGTTCTTGAATCTCGGCTCCTGAAGGTGATTTCCGCTTACGTCATGCAGGATGACCTCCTCTTCCCGATGCTCACAGTCGAAGAGACACTCATGTTCGCCGCTGAGTTCCGCCTCCCCCGCGCGCTGTCAAAATCTAAGAAGAAGTCCCGCGTCCAGGCGTTGATCGACCAGCTCGGCATCCGGAACGCCGCGAAGACGATCATCGGGGACGAAGGCCACCGCGGAGTCTCCGGCGGCGAGCGACGCCGCGTTTCGATCGGAATCGACATCATCCACGACCCGATCATCCTCTTCCTCGACGAGCCGACCTCCGGCCTCGACTCCACCAGCGCATTCATGGTGGTGAAAGTCCTCCAGCGAATCGCTCAGAGCGGGAGCATTGTCGTGATGTCCGTACACCAGCCCAGTTACCGGATCCTCGGACTCCTGGACCGGTTACTCTTCCTGACCCGGGGTCAAACCGTTTACAGTGGTTCCCCCGCCAACTTACCTTCCTACTTCGCTGAGTTCGGGTACCCGATACCCGAGTCCGAGAACCGGACCGAGTTCGCCCTCGACGTAATCCGAGAACTCGAAGGCTCGCCCGGAGGGACCAAGAGCCTGGTGGAGTTCAGCAGAACCTGGCAGAGCAGGAAGCACTCCAACCCTAACGACGCGTCGTACAGAGGAGCCTCCGACGCGCGACATGTCGTTCCTCTCCAGGAGGCGATAAGTGCTAGCATTTCTCGCGGGAAGTTGGTATCCGGAGCCCCTAACAACAACCCGAGCCCGAACTCGATGGTTCCCACATTCGCGAACCCGATCTGGGTCGAGATGGCGGTGCTTGCCAACCGTTCGATGAAAAACGCCAGAAGAATGCCGGAGCTCTTCGGTATCCGGCTCGGCACCGTCATGGTCACCGGATTCATCCTCGCCACCATGTTCTGGAACCTCGACGACTCCCCGAAAGGCGTACAAGAACGCCTCGGATTCATCGCCTTCGCCATGTCCACAACCTTCTACACCTGCGCCGACGCCCTCCCCGTCTTCCTCCAGGAACGCTACATCTTCATGCGCGAAACCGCCTACAACGCCTACCGCCGGTCCTCCTACGTGTTATCGCATTCTCTGGTGGTGCTGCCGTCGCTGGTTTTTCTCTCTATAGCGTTCTCAGTGACGACGTTTTGGGCGGTGGGACTCGACGGGGGACTGTCCGGGTTTCTGTTCTACTTTCTGATAATATTCGCGTCGTTTTGGGCGGGGAGTTCGTTCGTCACATTTCTCTCCGGGGTGGTCCCACAAGTGATGCTCGGGTACACAATCGTAGTGGCGATACTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCACGCGCGATAGAATCCCGGCGTACTGGATTTGGTTCCATTACCTGTCGTTGGTGAAGTATCCCTACGAGGGGGTGCTGCAGAACGAGTTTCAGAACACCGCGAAATGCTTCGTTCGCGGGACACAGATCTTCGACAACACGCCGCTGGGGACGGTGCCGGACGCGATGAAGCTGAAGCTGCTGGATAGCATGAGCGAGACGCTGGGGATGCGGATCACGCGGTCCACGTGTCTGACGACGGGGACGGATATTTTGGAGCAGCAGGGAGTGACGGACTTGAGCAAGTGGAACTGCCTGTGGGTGACGGTGGCTTGGGGGTTTCTGTTTAGGATTCTGTTTTACTTTGCCTTGTTGCTTGGGAGCAAGAACAAGAGGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043207 GO:0043492 GO:0044085 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

752

Amino Acids

82.88

Weight (kDa)

9.09

Isoelectric Point (pI)

37.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	127 - 279	2e-26	ABC transporter
ABC2_membrane_7	PF19055	308 - 366	4.8e-07	ABC-2 type transporter
ABC2_membrane	PF01061	448 - 655	1.1e-47	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39350 AT3G55090 AT5G13580
fragaria_vesca	FvH4_7g20800
malus_domestica	MD01G1117400.v1.1 MD07G1184900.v1.1
prunus_persica	Prupe.2G224800_v2.0.a1
pyrus_communis	pycom01g14510 pycom07g17710
rosa_chinensis	RchiOBHm_Chr1g0365031
rosa_laevigata	RLG00000027449
rosa_multiflora	Rmu_co8341207.1_g000001 Rmu_ssc0000112.1_g000014
rosa_roxburghii	Rroxscaffold_4G00291530 Rroxscaffold_4G00291980
rosa_rugosa	Rorug01G0319000
rosa_samantha	Rh1AG328100 Rh1BG289500 Rh1CG306100 Rh1DG320900
rosa_wichuraiana	Rw1G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1538
Acc36I	ACCTGC	1 cut(s)	1538
Acc65I	GGTACC	1 cut(s)	1038
AccB1I	GGYRCC	4 cut(s)	503, 1038, 1409, 2029
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccBSI	CCGCTC	2 cut(s)	438, 897
AccIII	TCCGGA	2 cut(s)	705, 1268
AclWI	GGATC	3 cut(s)	934, 947, 2096
AcoI	YGGCCR	1 cut(s)	100
AcsI	RAATTY	1 cut(s)	352
AcuI	CTGAAG	4 cut(s)	131, 566, 1843, 2069
AcvI	CACGTG	1 cut(s)	2103
AcyI	GRCGYC	3 cut(s)	465, 769, 1539
AfaI	GTAC	7 cut(s)	129, 921, 1040, 1187, 1479, 1820, 1898
AflIII	ACRYGT	4 cut(s)	1179, 1210, 1617, 2102
AgeI	ACCGGT	1 cut(s)	957
AgsI	TTSAA	2 cut(s)	499, 533
AhdI	GACNNNNNGTC	1 cut(s)	978
AjnI	CCWGG	6 cut(s)	678, 951, 1125, 1145, 1224, 1557
AluBI	AGCT	9 cut(s)	55, 106, 276, 495, 513, 697, 1390, 2047, 2053
AluI	AGCT	9 cut(s)	55, 106, 276, 495, 513, 697, 1390, 2047, 2053
Alw21I	GWGCWC	1 cut(s)	1392
Alw26I	GTCTC	5 cut(s)	12, 152, 602, 757, 2066
AlwI	GGATC	3 cut(s)	934, 947, 2096
AlwNI	CAGNNNCTG	2 cut(s)	109, 1146
Ama87I	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
Aor13HI	TCCGGA	2 cut(s)	705, 1268
AoxI	GGCC	4 cut(s)	100, 138, 739, 838
ApeKI	GCWGC	7 cut(s)	297, 376, 492, 1642, 1951, 2053, 2134
ApoI	RAATTY	1 cut(s)	352
ArsI	GACNNNNNNTTYG	2 cut(s)	2110, 2142
AsiGI	ACCGGT	1 cut(s)	957
Asp700I	GAANNNNTTC	2 cut(s)	356, 1982
Asp718I	GGTACC	1 cut(s)	1038
AspS9I	GGNCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
AsuC2I	CCSGG	7 cut(s)	283, 976, 977, 1110, 1720, 1792, 1892
AsuHPI	GGTGA	6 cut(s)	134, 562, 880, 1414, 1939, 2188
AsuNHI	GCTAGC	1 cut(s)	1241
AvaI	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
AvaII	GGWCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
BaeI	ACNNNNGTAYC	2 cut(s)	1037, 1070
BamHI	GGATCC	1 cut(s)	939
BanI	GGYRCC	4 cut(s)	503, 1038, 1409, 2029
BanII	GRGCYC	3 cut(s)	1276, 1295, 1392
BarI	GAAGNNNNNNTAC	2 cut(s)	1922, 1954
BbrPI	CACGTG	1 cut(s)	2103
BbsI	GAAGAC	2 cut(s)	725, 1543
Bbv12I	GWGCWC	1 cut(s)	1392
BbvI	GCAGC	7 cut(s)	284, 363, 504, 1629, 1938, 2040, 2146
BccI	CCATC	3 cut(s)	344, 1297, 1333
BceAI	ACGGC	6 cut(s)	19, 97, 166, 339, 535, 1630
BcgI	CGANNNNNNTGC	4 cut(s)	358, 392, 401, 435
BciT130I	CCWGG	6 cut(s)	680, 953, 1127, 1147, 1226, 1559
BciVI	GTATCC	3 cut(s)	1276, 1409, 1944
BcnI	CCSGG	7 cut(s)	283, 976, 977, 1110, 1720, 1792, 1892
BcoDI	GTCTC	5 cut(s)	12, 152, 602, 757, 2066
BfaI	CTAG	2 cut(s)	56, 1242
BfmI	CTRYAG	2 cut(s)	1665, 1952
BfoI	RGCGCY	2 cut(s)	87, 318
BfuAI	ACCTGC	1 cut(s)	1538
BfuI	GTATCC	3 cut(s)	1276, 1409, 1944
BglI	GCCNNNNNGGC	1 cut(s)	323
BglII	AGATCT	1 cut(s)	2001
Bme18I	GGWCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
BmeRI	GACNNNNNGTC	1 cut(s)	978
BmeT110I	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
BmgT120I	GGNCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
BmrI	ACTGGG	1 cut(s)	924
BmsI	GCATC	4 cut(s)	582, 711, 1800, 2073
BmtI	GCTAGC	1 cut(s)	1245
BmuI	ACTGGG	1 cut(s)	924
BpiI	GAAGAC	2 cut(s)	725, 1543
BplI	GAGNNNNNCTC	4 cut(s)	194, 226, 818, 850
BpmI	CTGGAG	3 cut(s)	863, 1208, 1541
BpuEI	CTTGAG	1 cut(s)	2173
BpuMI	CCSGG	7 cut(s)	283, 976, 977, 1110, 1720, 1792, 1892
BsaAI	YACGTR	3 cut(s)	131, 1618, 2103
BsaBI	GATNNNNATC	2 cut(s)	785, 2087
BsaHI	GRCGYC	3 cut(s)	465, 769, 1539
BsaWI	WCCGGW	6 cut(s)	705, 936, 957, 1062, 1268, 1424
Bse118I	RCCGGY	2 cut(s)	957, 1605
Bse1I	ACTGG	3 cut(s)	148, 930, 1904
Bse8I	GATNNNNATC	2 cut(s)	785, 2087
BseAI	TCCGGA	2 cut(s)	705, 1268
BseBI	CCWGG	6 cut(s)	680, 953, 1127, 1147, 1226, 1559
BseGI	GGATG	7 cut(s)	291, 580, 702, 795, 810, 1431, 2088
BseJI	GATNNNNATC	2 cut(s)	785, 2087
BseMII	CTCAG	6 cut(s)	325, 405, 618, 905, 1020, 1689
BseNI	ACTGG	3 cut(s)	148, 930, 1904
BsePI	GCGCGC	2 cut(s)	401, 645
BseRI	GAGGAG	3 cut(s)	572, 1206, 1844
BseXI	GCAGC	7 cut(s)	284, 363, 504, 1629, 1938, 2040, 2146
BseYI	CCCAGC	2 cut(s)	2020, 2077
Bsh1285I	CGRYCG	1 cut(s)	783
BshFI	GGCC	4 cut(s)	102, 140, 741, 840
BshNI	GGYRCC	4 cut(s)	503, 1038, 1409, 2029
BshTI	ACCGGT	1 cut(s)	957
BsiEI	CGRYCG	1 cut(s)	783
BsiHKAI	GWGCWC	1 cut(s)	1392
BsiHKCI	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
BslFI	GGGAC	9 cut(s)	655, 746, 1129, 1713, 1725, 1784, 2008, 2038, 2131
BsmAI	GTCTC	5 cut(s)	12, 152, 602, 757, 2066
BsmBI	CGTCTC	2 cut(s)	12, 2066
BsmFI	GGGAC	9 cut(s)	655, 746, 1129, 1713, 1725, 1784, 2008, 2038, 2131
BsmI	GAATGC	3 cut(s)	857, 1386, 1627
BsnI	GGCC	4 cut(s)	102, 140, 741, 840
BsoBI	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
Bsp1286I	GDGCHC	3 cut(s)	1276, 1295, 1392
Bsp13I	TCCGGA	2 cut(s)	705, 1268
Bsp143I	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
Bsp19I	CCATGG	1 cut(s)	48
Bsp68I	TCGCGA	1 cut(s)	1319
BspANI	GGCC	4 cut(s)	102, 140, 741, 840
BspCNI	CTCAG	6 cut(s)	324, 404, 619, 904, 1021, 1688
BspEI	TCCGGA	2 cut(s)	705, 1268
BspMAI	CTGCAG	1 cut(s)	1956
BspMI	ACCTGC	1 cut(s)	1538
BspOI	GCTAGC	1 cut(s)	1245
BspPI	GGATC	3 cut(s)	934, 947, 2096
BspQI	GCTCTTC	1 cut(s)	1397
BspT107I	GGYRCC	4 cut(s)	503, 1038, 1409, 2029
BsrBI	CCGCTC	2 cut(s)	438, 897
BsrFI	RCCGGY	2 cut(s)	957, 1605
BsrI	ACTGG	3 cut(s)	148, 930, 1904
BssAI	RCCGGY	2 cut(s)	957, 1605
BssHII	GCGCGC	2 cut(s)	401, 645
BssMI	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
BssNI	GRCGYC	3 cut(s)	465, 769, 1539
BssT1I	CCWWGG	2 cut(s)	48, 468
Bst2UI	CCWGG	6 cut(s)	680, 953, 1127, 1147, 1226, 1559
Bst4CI	ACNGT	9 cut(s)	508, 601, 988, 995, 1358, 1414, 1716, 2029, 2182
Bst6I	CTCTTC	6 cut(s)	590, 600, 821, 971, 1397, 1862
BstACI	GRCGYC	3 cut(s)	465, 769, 1539
BstBAI	YACGTR	3 cut(s)	131, 1618, 2103
BstC8I	GCNNGC	9 cut(s)	104, 196, 403, 436, 647, 764, 1106, 1243, 1350
BstDEI	CTNAG	7 cut(s)	311, 391, 627, 660, 891, 1029, 1675
BstDSI	CCRYGG	4 cut(s)	48, 79, 321, 745
BstEII	GGTNACC	1 cut(s)	1420
BstF5I	GGATG	7 cut(s)	291, 580, 702, 795, 810, 1431, 2088
BstH2I	RGCGCY	2 cut(s)	87, 318
BstKTI	GATC	9 cut(s)	462, 690, 726, 783, 810, 942, 1329, 2004, 2091
BstMAI	GTCTC	5 cut(s)	12, 152, 602, 757, 2066
BstMBI	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
BstMCI	CGRYCG	1 cut(s)	783
BstNI	CCWGG	6 cut(s)	680, 953, 1127, 1147, 1226, 1559
BstNSI	RCATGY	2 cut(s)	119, 1214
BstPI	GGTNACC	1 cut(s)	1420
BstSFI	CTRYAG	2 cut(s)	1665, 1952
BstSNI	TACGTA	1 cut(s)	131
BstV1I	GCAGC	7 cut(s)	284, 363, 504, 1629, 1938, 2040, 2146
BstV2I	GAAGAC	2 cut(s)	725, 1543
BstX2I	RGATCY	2 cut(s)	939, 2001
BstXI	CCANNNNNNTGG	1 cut(s)	1126
BstYI	RGATCY	2 cut(s)	939, 2001
BsuI	GTATCC	3 cut(s)	1276, 1409, 1944
BsuRI	GGCC	4 cut(s)	102, 140, 741, 840
BtgI	CCRYGG	4 cut(s)	48, 79, 321, 745
BtgZI	GCGATG	2 cut(s)	1483, 2054
BtsCI	GGATG	7 cut(s)	291, 580, 702, 795, 810, 1431, 2088
BtsIMutI	CAGTG	3 cut(s)	141, 1000, 1683
BtuMI	TCGCGA	1 cut(s)	1319
BveI	ACCTGC	1 cut(s)	1538
Cac8I	GCNNGC	9 cut(s)	104, 196, 403, 436, 647, 764, 1106, 1243, 1350
CaiI	CAGNNNCTG	2 cut(s)	109, 1146
Cfr10I	RCCGGY	2 cut(s)	957, 1605
Cfr13I	GGNCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
Cfr42I	CCGCGG	1 cut(s)	748
Cfr9I	CCCGGG	1 cut(s)	975
CpoI	CGGWCCG	1 cut(s)	1065
Csp6I	GTAC	7 cut(s)	128, 920, 1039, 1186, 1478, 1819, 1897
CspAI	ACCGGT	1 cut(s)	957
CspCI	CAANNNNNGTGG	2 cut(s)	1812, 1847
CspI	CGGWCCG	1 cut(s)	1065
CviQI	GTAC	7 cut(s)	128, 920, 1039, 1186, 1478, 1819, 1897
DdeI	CTNAG	7 cut(s)	311, 391, 627, 660, 891, 1029, 1675
DpnI	GATC	9 cut(s)	461, 689, 725, 782, 809, 941, 1328, 2003, 2090
DpnII	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
DriI	GACNNNNNGTC	1 cut(s)	978
EaeI	YGGCCR	1 cut(s)	100
Eam1104I	CTCTTC	6 cut(s)	590, 600, 821, 971, 1397, 1862
Eam1105I	GACNNNNNGTC	1 cut(s)	978
EarI	CTCTTC	6 cut(s)	590, 600, 821, 971, 1397, 1862
EciI	GGCGGA	3 cut(s)	32, 251, 623
Ecl136II	GAGCTC	1 cut(s)	1390
Eco105I	TACGTA	1 cut(s)	131
Eco130I	CCWWGG	2 cut(s)	48, 468
Eco24I	GRGCYC	3 cut(s)	1276, 1295, 1392
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
Eco53kI	GAGCTC	1 cut(s)	1390
Eco57I	CTGAAG	4 cut(s)	131, 566, 1843, 2069
Eco72I	CACGTG	1 cut(s)	2103
Eco88I	CYCGRG	6 cut(s)	200, 442, 975, 1049, 1288, 1814
Eco91I	GGTNACC	1 cut(s)	1420
EcoICRI	GAGCTC	1 cut(s)	1390
EcoO65I	GGTNACC	1 cut(s)	1420
EcoRII	CCWGG	6 cut(s)	678, 951, 1125, 1145, 1224, 1557
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	2 cut(s)	48, 468
EcoT38I	GRGCYC	3 cut(s)	1276, 1295, 1392
ErhI	CCWWGG	2 cut(s)	48, 468
Esp3I	CGTCTC	2 cut(s)	12, 2066
FalI	AAGNNNNNCTT	4 cut(s)	260, 292, 479, 511
FaqI	GGGAC	9 cut(s)	655, 746, 1129, 1713, 1725, 1784, 2008, 2038, 2131
FauI	CCCGC	7 cut(s)	650, 680, 890, 1012, 1247, 1756, 1985
FokI	GGATG	7 cut(s)	298, 587, 689, 782, 797, 1418, 2095
FriOI	GRGCYC	3 cut(s)	1276, 1295, 1392
FspBI	CTAG	2 cut(s)	56, 1242
GsaI	CCCAGC	2 cut(s)	2024, 2081
GsuI	CTGGAG	3 cut(s)	863, 1208, 1541
HaeII	RGCGCY	2 cut(s)	87, 318
HaeIII	GGCC	4 cut(s)	102, 140, 741, 840
Hin1I	GRCGYC	3 cut(s)	465, 769, 1539
HphI	GGTGA	6 cut(s)	134, 562, 880, 1414, 1939, 2188
Hpy166II	GTNNAC	5 cut(s)	922, 991, 1515, 1821, 2100
Hpy8I	GTNNAC	5 cut(s)	922, 991, 1515, 1821, 2100
HpyAV	CCTTC	7 cut(s)	481, 541, 731, 1026, 1094, 1513, 1531
HpyCH4III	ACNGT	9 cut(s)	508, 601, 988, 995, 1358, 1414, 1716, 2029, 2182
HpyCH4IV	ACGT	7 cut(s)	130, 245, 564, 1083, 1617, 1685, 2102
HpyCH4V	TGCA	3 cut(s)	300, 571, 1954
HpyF3I	CTNAG	7 cut(s)	311, 391, 627, 660, 891, 1029, 1675
HpySE526I	ACGT	7 cut(s)	130, 245, 564, 1083, 1617, 1685, 2102
Hsp92I	GRCGYC	3 cut(s)	465, 769, 1539
Kpn2I	TCCGGA	2 cut(s)	705, 1268
KpnI	GGTACC	1 cut(s)	1042
KspI	CCGCGG	1 cut(s)	748
Kzo9I	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
LguI	GCTCTTC	1 cut(s)	1397
LmnI	GCTCC	9 cut(s)	52, 215, 546, 900, 1193, 1271, 1387, 2131, 2235
Lsp1109I	GCAGC	7 cut(s)	284, 363, 504, 1629, 1938, 2040, 2146
LweI	GCATC	4 cut(s)	582, 711, 1800, 2073
MaeI	CTAG	2 cut(s)	56, 1242
MaeII	ACGT	7 cut(s)	130, 245, 564, 1083, 1617, 1685, 2102
MaeIII	GTNAC	7 cut(s)	932, 960, 1420, 1678, 1777, 2143, 2176
MalI	GATC	9 cut(s)	461, 689, 725, 782, 809, 941, 1328, 2003, 2090
MbiI	CCGCTC	2 cut(s)	438, 897
MboI	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
MflI	RGATCY	2 cut(s)	939, 2001
MhlI	GDGCHC	3 cut(s)	1276, 1295, 1392
MluCI	AATT	1 cut(s)	352
MluI	ACGCGT	1 cut(s)	1179
MlyI	GAGTC	8 cut(s)	154, 303, 759, 839, 942, 1061, 1457, 1695
MmeI	TCCRAC	3 cut(s)	354, 1191, 1224
MroI	TCCGGA	2 cut(s)	705, 1268
MroXI	GAANNNNTTC	2 cut(s)	356, 1982
MseI	TTAA	2 cut(s)	234, 515
MslI	CAYNNNNRTG	6 cut(s)	47, 120, 866, 908, 1415, 1574
MspA1I	CMGCKG	5 cut(s)	342, 626, 747, 1863, 2020
Mva1269I	GAATGC	3 cut(s)	857, 1386, 1627
MvaI	CCWGG	6 cut(s)	680, 953, 1127, 1147, 1226, 1559
NciI	CCSGG	7 cut(s)	283, 976, 977, 1110, 1720, 1792, 1892
NcoI	CCATGG	1 cut(s)	48
NdeII	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
NheI	GCTAGC	1 cut(s)	1241
NmeAIII	GCCGAG	5 cut(s)	78, 408, 517, 678, 1386
NmuCI	GTSAC	5 cut(s)	1420, 1678, 1777, 2143, 2176
NruI	TCGCGA	1 cut(s)	1319
NspI	RCATGY	2 cut(s)	119, 1214
PaeR7I	CTCGAG	1 cut(s)	200
PaqCI	CACCTGC	1 cut(s)	1538
PauI	GCGCGC	2 cut(s)	401, 645
PciI	ACATGT	1 cut(s)	1210
PciSI	GCTCTTC	1 cut(s)	1397
PcsI	WCGNNNNNNNCGW	6 cut(s)	186, 915, 1080, 1545, 2099, 2108
PctI	GAATGC	3 cut(s)	857, 1386, 1627
PdmI	GAANNNNTTC	2 cut(s)	356, 1982
PfeI	GAWTC	9 cut(s)	415, 475, 533, 786, 885, 1428, 1494, 1887, 2206
PflMI	CCANNNNNTGG	1 cut(s)	1449
PfoI	TCCNGGA	4 cut(s)	281, 951, 1224, 1557
PinAI	ACCGGT	1 cut(s)	957
Ple19I	CGATCG	1 cut(s)	783
PleI	GAGTC	8 cut(s)	154, 303, 758, 839, 942, 1060, 1457, 1695
PmaCI	CACGTG	1 cut(s)	2103
PmlI	CACGTG	1 cut(s)	2103
PpsI	GAGTC	8 cut(s)	154, 303, 758, 839, 942, 1060, 1457, 1695
Ppu21I	YACGTR	3 cut(s)	131, 1618, 2103
PscI	ACATGT	1 cut(s)	1210
Psp124BI	GAGCTC	1 cut(s)	1392
Psp6I	CCWGG	6 cut(s)	678, 951, 1125, 1145, 1224, 1557
PspCI	CACGTG	1 cut(s)	2103
PspEI	GGTNACC	1 cut(s)	1420
PspFI	CCCAGC	2 cut(s)	2020, 2077
PspGI	CCWGG	6 cut(s)	678, 951, 1125, 1145, 1224, 1557
PspPI	GGNCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
PspXI	VCTCGAGB	1 cut(s)	200
PstI	CTGCAG	1 cut(s)	1956
PstNI	CAGNNNCTG	2 cut(s)	109, 1146
PsuI	RGATCY	2 cut(s)	939, 2001
PteI	GCGCGC	2 cut(s)	401, 645
PvuI	CGATCG	1 cut(s)	783
RruI	TCGCGA	1 cut(s)	1319
RsaI	GTAC	7 cut(s)	129, 921, 1040, 1187, 1479, 1820, 1898
RsaNI	GTAC	7 cut(s)	128, 920, 1039, 1186, 1478, 1819, 1897
RseI	CAYNNNNRTG	6 cut(s)	47, 120, 866, 908, 1415, 1574
Rsr2I	CGGWCCG	1 cut(s)	1065
RsrII	CGGWCCG	1 cut(s)	1065
SacI	GAGCTC	1 cut(s)	1392
SacII	CCGCGG	1 cut(s)	748
SapI	GCTCTTC	1 cut(s)	1397
SaqAI	TTAA	2 cut(s)	234, 515
Sau3AI	GATC	9 cut(s)	459, 687, 723, 780, 807, 939, 1326, 2001, 2088
Sau96I	GGNCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
SchI	GAGTC	8 cut(s)	154, 303, 759, 839, 942, 1061, 1457, 1695
SduI	GDGCHC	3 cut(s)	1276, 1295, 1392
SfaNI	GCATC	4 cut(s)	582, 711, 1800, 2073
SfcI	CTRYAG	2 cut(s)	1665, 1952
Sfr274I	CTCGAG	1 cut(s)	200
Sfr303I	CCGCGG	1 cut(s)	748
SgrBI	CCGCGG	1 cut(s)	748
SinI	GGWCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
SlaI	CTCGAG	1 cut(s)	200
SmaI	CCCGGG	1 cut(s)	977
SmiMI	CAYNNNNRTG	6 cut(s)	47, 120, 866, 908, 1415, 1574
SmlI	CTYRAG	2 cut(s)	200, 2152
SmoI	CTYRAG	2 cut(s)	200, 2152
SnaBI	TACGTA	1 cut(s)	131
Sse9I	AATT	1 cut(s)	352
SspI	AATATT	1 cut(s)	1746
SspMI	CTAG	2 cut(s)	56, 1242
SstI	GAGCTC	1 cut(s)	1392
StyI	CCWWGG	2 cut(s)	48, 468
TaaI	ACNGT	9 cut(s)	508, 601, 988, 995, 1358, 1414, 1716, 2029, 2182
TaiI	ACGT	7 cut(s)	133, 248, 567, 1086, 1620, 1688, 2105
TaqII	GACCGA	1 cut(s)	1082
TasI	AATT	1 cut(s)	352
TfiI	GAWTC	9 cut(s)	415, 475, 533, 786, 885, 1428, 1494, 1887, 2206
Tru1I	TTAA	2 cut(s)	234, 515
Tru9I	TTAA	2 cut(s)	234, 515
TscAI	CASTG	3 cut(s)	148, 1000, 1683
TseFI	GTSAC	5 cut(s)	1420, 1678, 1777, 2143, 2176
TseI	GCWGC	7 cut(s)	297, 376, 492, 1642, 1951, 2053, 2134
Tsp45I	GTSAC	5 cut(s)	1420, 1678, 1777, 2143, 2176
TspDTI	ATGAA	7 cut(s)	850, 1379, 1420, 1486, 1564, 1861, 2057
TspGWI	ACGGA	3 cut(s)	907, 2135, 2162
TspMI	CCCGGG	1 cut(s)	975
TspRI	CASTG	3 cut(s)	148, 1000, 1683
Van91I	CCANNNNNTGG	1 cut(s)	1449
VpaK11BI	GGWCC	7 cut(s)	259, 955, 1065, 1116, 1608, 1798, 2097
XapI	RAATTY	1 cut(s)	352
XceI	RCATGY	2 cut(s)	119, 1214
XcmI	CCANNNNNNNNNTGG	2 cut(s)	859, 1126
XhoI	CTCGAG	1 cut(s)	200
XmaI	CCCGGG	1 cut(s)	975
XmnI	GAANNNNTTC	2 cut(s)	356, 1982
XspI	CTAG	2 cut(s)	56, 1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.