AT3G56370

Leucine-rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0013923
Physical Location & Seq
Reverse (-)
20899099 .. 20903080
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G56370.1

Sequence Viewer

Length: 2895 bp
ATGTACAAAGCACTGATTTTTACAGTCTTGTTGGTGTCGGCAGTAGCTCCGGTGAGATCTCTAGACCCGCCTTTAAACGACGACGTTTTAGGGCTCATTGTCTTCAAAGCCGATTTACGAGATCCAGAGCAAAAGCTAGCTTCTTGGAACGAAGATGACTACACTCCTTGTAGTTGGAACGGAGTCAAATGCCATCCGAGGACGAATCGAGTCACTGAGTTAAATCTAGATGGCTTCTCTCTGTCTGGTCGAATTGGTCGTGGCCTACTTCAGCTTCAGTTTCTTCATAAGCTCTCTCTGTCCAACAACAATCTCACGGGAATCATTAACCCTAATATGCTGCTGAGCCTTGTTAACCTTAAGGTTGTTGACTTGAGTAGCAATGGCTTGTCTGGTTCGCTTCCTGATGAGTTTTTCAGGCAATGTGGGTCATTAAGAGTTTTATCTCTGGCGAAGAACAAACTAACGGGGAAGATTCCGGTTAGTATAAGCTCGTGCTCGTCTCTTGCTGCTTTAAACTTGTCTTCCAATGGTTTTTCTGGTTCTATGCCTTTGGGGATTTGGTCTTTGAACACTCTAAGATCACTTGATTTGTCGAGGAATGAGTTAGAGGGAGAGTTTCCAGAGAAGATAGATAGATTGAACAACTTGCGTGCGCTTGATTTGAGTAGAAACCGGTTATCTGGTCCTATTCCTAGCGAAATTGGGAGCTGTATGCTGCTGAAGACTATTGATCTTAGTGAAAACTCTCTATCAGGAAGCTTACCAAATACATTTCAGCAGCTCAGTTTGTGTTATTCTCTGAACTTGGGAAAGAATGCGTTAGAAGGTGAAGTTCCAAAGTGGATAGGAGAAATGAGGAGTCTTGAGACTTTGGATCTTTCCATGAATAAGTTTTCAGGGCAGGTTCCAGACTCCATAGGCAACCTTCTAGCACTGAAAGTTCTCAACTTTTCTGGGAATGGGCTTATTGGTAGCTTGCCGGTCTCAACAGCCAACTGTATCAACCTCTTGGCCTTAGATTTAAGTGGGAATTCACTAACTGGAAAGCTTCCCATGTGGCTATTTCAAGATGGTTCTCGTGATGTGTCTGCATTAAAGAATGATAACTCTACTGGAGGTATCAAGAAGATCCAGGTTTTGGATCTCTCCCACAATGCATTCTCTGGCGAGATTGGAGCTGGTCTAGGAGATCTTAGAGACCTGGAGGGATTGCATCTGTCCAGAAACTCTCTTACCGGCCCCATCCCCAGTACCATTGGGGAACTAAAGCACTTGAGCGTCCTTGATGTGAGTCACAATCAGCTCAATGGAATGATTCCTCGAGAAACAGGTGGAGCTGTTTCTTTGGAGGAGTTGAGACTTGAAAATAACTTGTTGGAGGGAAATATTCCATCTTCCATCAAGAATTGCAGTTCCCTTCGGTCTTTGATCCTGTCACATAACAAGCTGCTAGGCTCAATTCCACCAGAGCTCGCTAAACTTACAAGACTCGAAGAAGTCGACTTATCATTTAATGAACTGGCCGGAACACTTCCTAAACAGTTGGCTAATCTCGGCTATCTTCACACATTCAACATATCTCATAACCATCTCTTTGGGGAACTACCTGCAGGTGGAATCTTCAACGGTTTATCCCCAAGTTCAGTATCAGGAAACCCGGGAATTTGCGGTGCTGTTGTCAATAAGTCTTGTCCTGCCATCTCCCCTAAACCGATTGTGTTGAATCCTAATGCAACTTTCGATCCTTACAATGGTGAAATAGTGCCTCCAGGTGCTGGTCACAAAAGGATACTGCTTAGTATATCTTCTTTGATAGCCATTAGTGCTGCTGCAGCCATTGTGGTTGGTGTAATAGCCATCACGGTACTTAATCTGAGAGTGCGCGCATCAACGGTTTCAAGATCAGCAGTACCGCTCACGTTCTCAGGCGGAGATGACTTCAGTCGATCTCCCACTACTGATAGCAACTCAGGGAAGCTGGTGATGTTCTCTGGTGAACCTGATTTCAGCACTGGAACACATGCTCTGCTTAACAAAGACTGTGAGCTTGGTCGAGGTGGATTTGGAGCGGTGTACAGAACAGTTATCAGAGATGGGTATCCTGTAGCTATCAAGAAGCTCACTGTCTCGAGTCTTGTCAAGTCTCAGGACGAATTCGAAAGAGAGGTGAAGAAACTTGGAAAACTCAGGCATTCGAATCTGGTTAAACTCGAAGGATATTACTGGACAACTTCTCTCCAGCTTCTGATCTATGAGTTTCTCTCTGGTGGGAGTTTATACAAACAGTTGCACGAAGCACCAGGAGGTAATAGTTCGCTTTCTTGGAATGATCGGTTCAACATTATCCTTGGTACAGCGAAATGCTTAGCTTACTTGCACCAATCAAACATCATCCACTACAACATCAAATCGAGCAACGTGTTGCTAGACAGCTCTGGTGAGCCTAAAGTAGGAGACTACGGATTAGCGAGGCTGTTACCTATGCTAGATAGGTACGTGCTGAGTAGCAAGATACAGAGTGCGTTGGGATACATGGCTCCAGAGTTTGCTTGTAGAACGGTGAAAATAACAGAGAAATGTGATGTTTATGGATTTGGAGTCTTGGTCCTTGAAGTGGTTACAGGTAAAAAGCCTGTGGAGTATATGGAAGATGATGTTGTGGTTTTGTGTGATATGGTGAGAGAAGCTCTTGAAGATGGAAGAGCAGATGAATGTATTGACCCAAGGCTGCAAGGGAAGTTTCCGGTAGAAGAAGCGGTTGCAGTGATAAAGCTAGGGCTTATTTGCACTTCTCAGGTTCCATCAAGTAGACCACATATGGGAGAAGCTGTTAACATATTGAGGATGATCAGATGCCCTTCAGGGAGCTCAGATGAGTTGGGTTCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

964

Amino Acids

103.85

Weight (kDa)

6.42

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 25 - 64 3.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 89 - 223 7.9e-06 Leucine-rich repeat region
LRR_8 PF13855 119 - 178 4.5e-10 Leucine rich repeat
LRR_14 PF23598 187 - 319 2.9e-13 Leucine-rich repeat region
LRR_14 PF23598 377 - 530 2.5e-10 Leucine-rich repeat region
LRR_8 PF13855 402 - 460 4.7e-08 Leucine rich repeat
LRR_8 PF13855 473 - 532 6.5e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 680 - 888 4.9e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 681 - 887 3.1e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013923)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G56370
fragaria_vesca FvH4_7g25950
malus_domestica MD01G1167900.v1.1 MD07G1233900.v1.1
prunus_persica Prupe.2G264300_v2.0.a1
pyrus_communis pycom01g18090 pycom07g21170
rosa_chinensis RchiOBHm_Chr1g0372331
rosa_laevigata RLG00000026907
rosa_multiflora Rmu_sc0001755.1_g000008
rosa_roxburghii Rroxscaffold_4G00285050
rosa_rugosa Rorug01G0371200
rosa_samantha Rh1AG379600 Rh1BG343100 Rh1CG356600 Rh1DG374300
rosa_wichuraiana Rw1G033370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1604
Acc36I ACCTGC 3 cut(s) 895, 1604, 1618
AccB7I CCANNNNNTGG 2 cut(s) 1141, 1778
AccBSI CCGCTC 2 cut(s) 1918, 2072
AccI GTMKAC 2 cut(s) 1503, 2812
AccII CGCG 1 cut(s) 1887
AciI CCGC 6 cut(s) 68, 1671, 1916, 1932, 2072, 2759
AclWI GGATC 6 cut(s) 116, 885, 1126, 1152, 1426, 1739
AcoI YGGCCR 1 cut(s) 1524
AcsI RAATTY 3 cut(s) 1033, 1665, 2156
AcuI CTGAAG 5 cut(s) 254, 260, 743, 1927, 2847
AfaI GTAC 7 cut(s) 5, 1255, 1869, 1914, 2078, 2356, 2498
AfiI CCNNNNNNNGG 7 cut(s) 1141, 1616, 1754, 1778, 2453, 2617, 2822
AflII CTTAAG 1 cut(s) 359
AflIII ACRYGT 1 cut(s) 2421
AgeI ACCGGT 1 cut(s) 675
AjnI CCWGG 4 cut(s) 1134, 1203, 1771, 2302
Alw21I GWGCWC 3 cut(s) 500, 1476, 2873
Alw26I GTCTC 8 cut(s) 507, 863, 991, 1194, 1354, 2134, 2151, 2451
AlwI GGATC 6 cut(s) 116, 885, 1126, 1152, 1426, 1739
AlwNI CAGNNNCTG 2 cut(s) 1778, 2248
Ama87I CYCGRG 3 cut(s) 1323, 1660, 2131
AoxI GGCC 4 cut(s) 262, 1014, 1240, 1524
ApeKI GCWGC 9 cut(s) 340, 509, 718, 781, 1450, 1829, 1832, 1835, 2731
ApoI RAATTY 3 cut(s) 1033, 1665, 2156
AsiGI ACCGGT 1 cut(s) 675
AspLEI GCGC 3 cut(s) 658, 1887, 1889
AspS9I GGNCC 3 cut(s) 686, 1241, 2608
AsuC2I CCSGG 2 cut(s) 1661, 1662
AsuHPI GGTGA 9 cut(s) 64, 842, 1769, 1996, 2009, 2182, 2453, 2575, 2692
AsuII TTCGAA 2 cut(s) 2160, 2198
AsuNHI GCTAGC 1 cut(s) 136
AvaI CYCGRG 3 cut(s) 1323, 1660, 2131
AvaII GGWCC 2 cut(s) 686, 2608
BanII GRGCYC 3 cut(s) 96, 1476, 2873
BauI CACGAG 2 cut(s) 493, 1080
BbsI GAAGAC 3 cut(s) 94, 516, 731
Bbv12I GWGCWC 3 cut(s) 500, 1476, 2873
BbvI GCAGC 9 cut(s) 327, 496, 705, 793, 1437, 1816, 1819, 1847, 2718
BciT130I CCWGG 4 cut(s) 1136, 1205, 1773, 2304
BciVI GTATCC 3 cut(s) 1785, 2112, 2525
BclI TGATCA 1 cut(s) 2850
BcnI CCSGG 2 cut(s) 1661, 1662
BcoDI GTCTC 8 cut(s) 507, 863, 991, 1194, 1354, 2134, 2151, 2451
BfmI CTRYAG 3 cut(s) 1611, 1833, 2106
BfrI CTTAAG 1 cut(s) 359
BfuAI ACCTGC 3 cut(s) 895, 1604, 1618
BfuI GTATCC 3 cut(s) 1785, 2112, 2525
BglII AGATCT 2 cut(s) 56, 1192
BisI GCNGC 9 cut(s) 341, 510, 719, 782, 1451, 1830, 1833, 1836, 2732
BlpI GCTNAGC 2 cut(s) 344, 2368
BlsI GCNGC 9 cut(s) 342, 511, 720, 783, 1452, 1831, 1834, 1837, 2733
Bme1390I CCNGG 6 cut(s) 1136, 1205, 1661, 1662, 1773, 2304
Bme18I GGWCC 2 cut(s) 686, 2608
BmeT110I CYCGRG 3 cut(s) 1323, 1660, 2131
BmgT120I GGNCC 3 cut(s) 686, 1241, 2608
BmiI GGNNCC 4 cut(s) 909, 1243, 2541, 2802
BmrFI CCNGG 6 cut(s) 1136, 1205, 1661, 1662, 1773, 2304
BmrI ACTGGG 1 cut(s) 1245
BmsI GCATC 3 cut(s) 1225, 1898, 2846
BmtI GCTAGC 1 cut(s) 140
BmuI ACTGGG 1 cut(s) 1245
BoxI GACNNNNGTC 1 cut(s) 1944
BpiI GAAGAC 3 cut(s) 94, 516, 731
BplI GAGNNNNNCTC 4 cut(s) 2249, 2281, 2674, 2706
BpmI CTGGAG 5 cut(s) 1137, 1226, 1755, 2225, 2526
Bpu1102I GCTNAGC 2 cut(s) 344, 2368
Bpu14I TTCGAA 2 cut(s) 2160, 2198
BpuEI CTTGAG 3 cut(s) 394, 887, 1297
BpuMI CCSGG 2 cut(s) 1661, 1662
BsaAI YACGTR 1 cut(s) 2500
BsaBI GATNNNNATC 1 cut(s) 2100
BsaI GGTCTC 2 cut(s) 991, 1194
BsaJI CCNNGG 4 cut(s) 197, 1660, 2350, 2726
BsaWI WCCGGW 4 cut(s) 49, 478, 675, 2746
BsaXI ACNNNNNCTCC 4 cut(s) 2592, 2622, 2817, 2847
Bsc4I CCNNNNNNNGG 7 cut(s) 1141, 1616, 1754, 1778, 2453, 2617, 2822
Bse118I RCCGGY 3 cut(s) 675, 982, 1238
Bse1I ACTGG 6 cut(s) 1048, 1120, 1251, 1527, 2020, 2231
Bse3DI GCAATG 2 cut(s) 388, 428
Bse8I GATNNNNATC 1 cut(s) 2100
BseBI CCWGG 4 cut(s) 1136, 1205, 1773, 2304
BseDI CCNNGG 4 cut(s) 197, 1660, 2350, 2726
BseGI GGATG 4 cut(s) 193, 1245, 2394, 2853
BseJI GATNNNNATC 1 cut(s) 2100
BseLI CCNNNNNNNGG 7 cut(s) 1141, 1616, 1754, 1778, 2453, 2617, 2822
BseMI GCAATG 2 cut(s) 388, 428
BseNI ACTGG 6 cut(s) 1048, 1120, 1251, 1527, 2020, 2231
BsePI GCGCGC 1 cut(s) 1885
BseRI GAGGAG 2 cut(s) 874, 1367
BseXI GCAGC 9 cut(s) 327, 496, 705, 793, 1437, 1816, 1819, 1847, 2718
Bsh1236I CGCG 1 cut(s) 1887
BshFI GGCC 4 cut(s) 264, 1016, 1242, 1526
BshTI ACCGGT 1 cut(s) 675
BsiHKAI GWGCWC 3 cut(s) 500, 1476, 2873
BsiHKCI CYCGRG 3 cut(s) 1323, 1660, 2131
BsiSI CCGG 8 cut(s) 50, 479, 676, 983, 1239, 1527, 1661, 2747
BslI CCNNNNNNNGG 7 cut(s) 1141, 1616, 1754, 1778, 2453, 2617, 2822
BsmAI GTCTC 8 cut(s) 507, 863, 991, 1194, 1354, 2134, 2151, 2451
BsmBI CGTCTC 1 cut(s) 507
BsmI GAATGC 3 cut(s) 823, 1160, 2194
BsnI GGCC 4 cut(s) 264, 1016, 1242, 1526
Bso31I GGTCTC 2 cut(s) 991, 1194
BsoBI CYCGRG 3 cut(s) 1323, 1660, 2131
Bsp119I TTCGAA 2 cut(s) 2160, 2198
Bsp1286I GDGCHC 4 cut(s) 96, 500, 1476, 2873
Bsp1407I TGTACA 2 cut(s) 3, 2076
Bsp1720I GCTNAGC 2 cut(s) 344, 2368
BspACI CCGC 6 cut(s) 68, 1671, 1916, 1932, 2072, 2759
BspANI GGCC 4 cut(s) 264, 1016, 1242, 1526
BspFNI CGCG 1 cut(s) 1887
BspLI GGNNCC 4 cut(s) 909, 1243, 2541, 2802
BspMAI CTGCAG 2 cut(s) 1615, 1837
BspMI ACCTGC 3 cut(s) 895, 1604, 1618
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 6 cut(s) 116, 885, 1126, 1152, 1426, 1739
BspQI GCTCTTC 1 cut(s) 2698
BspT104I TTCGAA 2 cut(s) 2160, 2198
BspTI CTTAAG 1 cut(s) 359
BspTNI GGTCTC 2 cut(s) 991, 1194
BsrBI CCGCTC 2 cut(s) 1918, 2072
BsrDI GCAATG 2 cut(s) 388, 428
BsrFI RCCGGY 3 cut(s) 675, 982, 1238
BsrGI TGTACA 2 cut(s) 3, 2076
BsrI ACTGG 6 cut(s) 1048, 1120, 1251, 1527, 2020, 2231
BssAI RCCGGY 3 cut(s) 675, 982, 1238
BssECI CCNNGG 4 cut(s) 197, 1660, 2350, 2726
BssHII GCGCGC 1 cut(s) 1885
BssSI CACGAG 2 cut(s) 493, 1080
BssT1I CCWWGG 2 cut(s) 2350, 2726
Bst2BI CACGAG 2 cut(s) 493, 1080
Bst2UI CCWGG 4 cut(s) 1136, 1205, 1773, 2304
Bst6I CTCTTC 1 cut(s) 2698
BstAFI CTTAAG 1 cut(s) 359
BstAUI TGTACA 2 cut(s) 3, 2076
BstBAI YACGTR 1 cut(s) 2500
BstBI TTCGAA 2 cut(s) 2160, 2198
BstC8I GCNNGC 5 cut(s) 138, 654, 980, 1476, 1887
BstENI CCTNNNNNAGG 1 cut(s) 2451
BstF5I GGATG 4 cut(s) 193, 1245, 2394, 2853
BstFNI CGCG 1 cut(s) 1887
BstHHI GCGC 3 cut(s) 658, 1887, 1889
BstMAI GTCTC 8 cut(s) 507, 863, 991, 1194, 1354, 2134, 2151, 2451
BstMWI GCNNNNNNNGC 2 cut(s) 1826, 1835
BstNI CCWGG 4 cut(s) 1136, 1205, 1773, 2304
BstNSI RCATGY 1 cut(s) 2027
BstPAI GACNNNNGTC 1 cut(s) 1944
BstSCI CCNGG 6 cut(s) 1134, 1203, 1659, 1660, 1771, 2302
BstSFI CTRYAG 3 cut(s) 1611, 1833, 2106
BstUI CGCG 1 cut(s) 1887
BstV1I GCAGC 9 cut(s) 327, 496, 705, 793, 1437, 1816, 1819, 1847, 2718
BstV2I GAAGAC 3 cut(s) 94, 516, 731
BstX2I RGATCY 6 cut(s) 56, 121, 877, 1131, 1144, 1192
BstXI CCANNNNNNTGG 1 cut(s) 1598
BstYI RGATCY 6 cut(s) 56, 121, 877, 1131, 1144, 1192
BsuI GTATCC 3 cut(s) 1785, 2112, 2525
BsuRI GGCC 4 cut(s) 264, 1016, 1242, 1526
BtsCI GGATG 4 cut(s) 193, 1245, 2394, 2853
BtsI GCAGTG 1 cut(s) 2772
BtsIMutI CAGTG 6 cut(s) 11, 213, 935, 2013, 2124, 2772
BveI ACCTGC 3 cut(s) 895, 1604, 1618
Cac8I GCNNGC 5 cut(s) 138, 654, 980, 1476, 1887
CaiI CAGNNNCTG 2 cut(s) 1778, 2248
CfoI GCGC 3 cut(s) 658, 1887, 1889
Cfr10I RCCGGY 3 cut(s) 675, 982, 1238
Cfr13I GGNCC 3 cut(s) 686, 1241, 2608
Cfr9I CCCGGG 1 cut(s) 1660
CseI GACGC 1 cut(s) 1270
Csp6I GTAC 7 cut(s) 4, 1254, 1868, 1913, 2077, 2355, 2497
CspAI ACCGGT 1 cut(s) 675
CviAII CATG 4 cut(s) 886, 1057, 2024, 2536
CviQI GTAC 7 cut(s) 4, 1254, 1868, 1913, 2077, 2355, 2497
DraI TTTAAA 2 cut(s) 75, 516
EaeI YGGCCR 1 cut(s) 1524
Eam1104I CTCTTC 1 cut(s) 2698
EarI CTCTTC 1 cut(s) 2698
EciI GGCGGA 1 cut(s) 1947
Ecl136II GAGCTC 2 cut(s) 1474, 2871
Eco130I CCWWGG 2 cut(s) 2350, 2726
Eco24I GRGCYC 3 cut(s) 96, 1476, 2873
Eco31I GGTCTC 2 cut(s) 991, 1194
Eco47I GGWCC 2 cut(s) 686, 2608
Eco53kI GAGCTC 2 cut(s) 1474, 2871
Eco57I CTGAAG 5 cut(s) 254, 260, 743, 1927, 2847
Eco88I CYCGRG 3 cut(s) 1323, 1660, 2131
EcoICRI GAGCTC 2 cut(s) 1474, 2871
EcoNI CCTNNNNNAGG 1 cut(s) 2451
EcoRI GAATTC 2 cut(s) 1033, 2156
EcoRII CCWGG 4 cut(s) 1134, 1203, 1771, 2302
EcoT14I CCWWGG 2 cut(s) 2350, 2726
EcoT22I ATGCAT 1 cut(s) 1162
EcoT38I GRGCYC 3 cut(s) 96, 1476, 2873
ErhI CCWWGG 2 cut(s) 2350, 2726
Esp3I CGTCTC 1 cut(s) 507
FaeI CATG 4 cut(s) 889, 1060, 2027, 2539
FatI CATG 4 cut(s) 885, 1056, 2023, 2535
FauI CCCGC 1 cut(s) 75
FauNDI CATATG 1 cut(s) 2820
FbaI TGATCA 1 cut(s) 2850
FblI GTMKAC 2 cut(s) 1503, 2812
Fnu4HI GCNGC 9 cut(s) 341, 510, 719, 782, 1451, 1830, 1833, 1836, 2732
FokI GGATG 4 cut(s) 180, 1232, 2381, 2860
FriOI GRGCYC 3 cut(s) 96, 1476, 2873
Fsp4HI GCNGC 9 cut(s) 341, 510, 719, 782, 1451, 1830, 1833, 1836, 2732
GlaI GCGC 3 cut(s) 657, 1886, 1888
GluI GCNGC 9 cut(s) 341, 510, 719, 782, 1451, 1830, 1833, 1836, 2732
GsuI CTGGAG 5 cut(s) 1137, 1226, 1755, 2225, 2526
HaeIII GGCC 4 cut(s) 264, 1016, 1242, 1526
HapII CCGG 8 cut(s) 50, 479, 676, 983, 1239, 1527, 1661, 2747
HgaI GACGC 1 cut(s) 1270
HhaI GCGC 3 cut(s) 658, 1887, 1889
Hin1II CATG 4 cut(s) 889, 1060, 2027, 2539
Hin6I GCGC 3 cut(s) 656, 1885, 1887
HinP1I GCGC 3 cut(s) 656, 1885, 1887
HincII GTYRAC 4 cut(s) 355, 370, 1504, 2836
HindII GTYRAC 4 cut(s) 355, 370, 1504, 2836
HindIII AAGCTT 2 cut(s) 760, 1049
HpaI GTTAAC 2 cut(s) 355, 2836
HpaII CCGG 8 cut(s) 50, 479, 676, 983, 1239, 1527, 1661, 2747
HphI GGTGA 9 cut(s) 64, 842, 1769, 1996, 2009, 2182, 2453, 2575, 2692
Hpy166II GTNNAC 7 cut(s) 355, 370, 1504, 2000, 2077, 2813, 2836
Hpy188I TCNGA 7 cut(s) 198, 804, 1878, 2093, 2250, 2855, 2875
Hpy8I GTNNAC 7 cut(s) 355, 370, 1504, 2000, 2077, 2813, 2836
Hpy99I CGWCG 2 cut(s) 83, 86
HpyAV CCTTC 5 cut(s) 821, 938, 1430, 2210, 2871
HpyCH4IV ACGT 4 cut(s) 84, 1922, 2421, 2499
HpyF10VI GCNNNNNNNGC 2 cut(s) 1826, 1835
HpySE526I ACGT 4 cut(s) 84, 1922, 2421, 2499
Hsp92II CATG 4 cut(s) 889, 1060, 2027, 2539
HspAI GCGC 3 cut(s) 656, 1885, 1887
Ksp22I TGATCA 1 cut(s) 2850
KspAI GTTAAC 2 cut(s) 355, 2836
LguI GCTCTTC 1 cut(s) 2698
LmnI GCTCC 7 cut(s) 52, 708, 1178, 1337, 2069, 2545, 2868
Lsp1109I GCAGC 9 cut(s) 327, 496, 705, 793, 1437, 1816, 1819, 1847, 2718
LweI GCATC 3 cut(s) 1225, 1898, 2846
MaeII ACGT 4 cut(s) 84, 1922, 2421, 2499
MaeIII GTNAC 6 cut(s) 211, 1295, 1437, 1781, 2478, 2620
MbiI CCGCTC 2 cut(s) 1918, 2072
MflI RGATCY 6 cut(s) 56, 121, 877, 1131, 1144, 1192
MhlI GDGCHC 4 cut(s) 96, 500, 1476, 2873
MluCI AATT 7 cut(s) 252, 702, 1033, 1408, 1461, 1665, 2156
MlyI GAGTC 8 cut(s) 192, 219, 871, 908, 1303, 1485, 2143, 2610
MmeI TCCRAC 3 cut(s) 155, 327, 1359
Mph1103I ATGCAT 1 cut(s) 1162
MspCI CTTAAG 1 cut(s) 359
MspI CCGG 8 cut(s) 50, 479, 676, 983, 1239, 1527, 1661, 2747
MspR9I CCNGG 6 cut(s) 1136, 1205, 1661, 1662, 1773, 2304
Mva1269I GAATGC 3 cut(s) 823, 1160, 2194
MvaI CCWGG 4 cut(s) 1136, 1205, 1773, 2304
MvnI CGCG 1 cut(s) 1887
MwoI GCNNNNNNNGC 2 cut(s) 1826, 1835
NciI CCSGG 2 cut(s) 1661, 1662
NdeI CATATG 1 cut(s) 2820
NheI GCTAGC 1 cut(s) 136
NlaIII CATG 4 cut(s) 889, 1060, 2027, 2539
NlaIV GGNNCC 4 cut(s) 909, 1243, 2541, 2802
NmeAIII GCCGAG 1 cut(s) 1536
NmuCI GTSAC 4 cut(s) 211, 1295, 1437, 1781
NsiI ATGCAT 1 cut(s) 1162
NspI RCATGY 1 cut(s) 2027
NspV TTCGAA 2 cut(s) 2160, 2198
PaeR7I CTCGAG 2 cut(s) 1323, 2131
PaqCI CACCTGC 1 cut(s) 1604
PauI GCGCGC 1 cut(s) 1885
PciSI GCTCTTC 1 cut(s) 2698
PcsI WCGNNNNNNNCGW 2 cut(s) 256, 1500
PctI GAATGC 3 cut(s) 823, 1160, 2194
PfeI GAWTC 7 cut(s) 205, 321, 475, 1318, 1620, 1726, 2200
PflMI CCANNNNNTGG 2 cut(s) 1141, 1778
PinAI ACCGGT 1 cut(s) 675
PkrI GCNGC 9 cut(s) 342, 511, 720, 783, 1452, 1831, 1834, 1837, 2733
PleI GAGTC 8 cut(s) 191, 218, 870, 908, 1302, 1485, 2142, 2609
PpsI GAGTC 8 cut(s) 191, 218, 870, 908, 1302, 1485, 2142, 2609
Ppu21I YACGTR 1 cut(s) 2500
PshAI GACNNNNGTC 1 cut(s) 1944
Psp124BI GAGCTC 2 cut(s) 1476, 2873
Psp6I CCWGG 4 cut(s) 1134, 1203, 1771, 2302
PspGI CCWGG 4 cut(s) 1134, 1203, 1771, 2302
PspN4I GGNNCC 4 cut(s) 909, 1243, 2541, 2802
PspPI GGNCC 3 cut(s) 686, 1241, 2608
PstI CTGCAG 2 cut(s) 1615, 1837
PstNI CAGNNNCTG 2 cut(s) 1778, 2248
PsuI RGATCY 6 cut(s) 56, 121, 877, 1131, 1144, 1192
PteI GCGCGC 1 cut(s) 1885
RsaI GTAC 7 cut(s) 5, 1255, 1869, 1914, 2078, 2356, 2498
RsaNI GTAC 7 cut(s) 4, 1254, 1868, 1913, 2077, 2355, 2497
SacI GAGCTC 2 cut(s) 1476, 2873
SalI GTCGAC 1 cut(s) 1502
SapI GCTCTTC 1 cut(s) 2698
SatI GCNGC 9 cut(s) 341, 510, 719, 782, 1451, 1830, 1833, 1836, 2732
Sau96I GGNCC 3 cut(s) 686, 1241, 2608
SbfI CCTGCAGG 1 cut(s) 1615
SchI GAGTC 8 cut(s) 192, 219, 871, 908, 1303, 1485, 2143, 2610
ScrFI CCNGG 6 cut(s) 1136, 1205, 1661, 1662, 1773, 2304
SdaI CCTGCAGG 1 cut(s) 1615
SduI GDGCHC 4 cut(s) 96, 500, 1476, 2873
SfaNI GCATC 3 cut(s) 1225, 1898, 2846
SfcI CTRYAG 3 cut(s) 1611, 1833, 2106
Sfr274I CTCGAG 2 cut(s) 1323, 2131
SfuI TTCGAA 2 cut(s) 2160, 2198
SinI GGWCC 2 cut(s) 686, 2608
SlaI CTCGAG 2 cut(s) 1323, 2131
SmaI CCCGGG 1 cut(s) 1662
SmlI CTYRAG 6 cut(s) 359, 373, 866, 1276, 1323, 2131
SmoI CTYRAG 6 cut(s) 359, 373, 866, 1276, 1323, 2131
Sse8387I CCTGCAGG 1 cut(s) 1615
Sse9I AATT 7 cut(s) 252, 702, 1033, 1408, 1461, 1665, 2156
SsiI CCGC 6 cut(s) 68, 1671, 1916, 1932, 2072, 2759
SspI AATATT 1 cut(s) 1390
SstI GAGCTC 2 cut(s) 1476, 2873
StyD4I CCNGG 6 cut(s) 1134, 1203, 1659, 1660, 1771, 2302
StyI CCWWGG 2 cut(s) 2350, 2726
TaiI ACGT 4 cut(s) 87, 1925, 2424, 2502
TaqII GACCGA 1 cut(s) 1413
TasI AATT 7 cut(s) 252, 702, 1033, 1408, 1461, 1665, 2156
TatI WGTACW 2 cut(s) 3, 2076
TfiI GAWTC 7 cut(s) 205, 321, 475, 1318, 1620, 1726, 2200
TscAI CASTG 6 cut(s) 18, 220, 942, 2020, 2131, 2772
TseFI GTSAC 4 cut(s) 211, 1295, 1437, 1781
TseI GCWGC 9 cut(s) 340, 509, 718, 781, 1450, 1829, 1832, 1835, 2731
Tsp45I GTSAC 4 cut(s) 211, 1295, 1437, 1781
TspDTI ATGAA 4 cut(s) 275, 902, 1533, 2727
TspGWI ACGGA 2 cut(s) 195, 2478
TspMI CCCGGG 1 cut(s) 1660
TspRI CASTG 6 cut(s) 18, 220, 942, 2020, 2131, 2772
Van91I CCANNNNNTGG 2 cut(s) 1141, 1778
Vha464I CTTAAG 1 cut(s) 359
VpaK11BI GGWCC 2 cut(s) 686, 2608
XagI CCTNNNNNAGG 1 cut(s) 2451
XapI RAATTY 3 cut(s) 1033, 1665, 2156
XbaI TCTAGA 2 cut(s) 61, 226
XceI RCATGY 1 cut(s) 2027
XhoI CTCGAG 2 cut(s) 1323, 2131
XmaI CCCGGG 1 cut(s) 1660
XmiI GTMKAC 2 cut(s) 1503, 2812
Zsp2I ATGCAT 1 cut(s) 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.