FvH4_7g25950
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0013923
Physical Location & Seq
Reverse (-)
19738833 .. 19743285
4453 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g25950.t1

Sequence Viewer

Length: 2910 bp
ATGAAGCCGTTGCTGTTACTGCTCGCCATGTTTGCTCTGTCCCCAATTCTTCTGGGGAGATCCCTGAACCCGTCGTTGAACGACGACGTTTTGGGGCTGATAGTGTTCAAGGCAGACATTCAAGATCCCAAGGCGAAATTGGGTTCATGGAATGAAGACGACGACAGTCCTTGCGGCTGGGTCGGAGTTAACTGCAACCCAAGATCCAACGCCGTCGTGGAGCTCAACCTCGACGGGTTTTCGCTCTCCGGCCACATTGGCCGGGGGCTTCTTCAGTTACAGTCTCTTCGCAAGCTCTCGCTGTCGAAAAACAACCTCACCGGAAGCTTGAGCGCCAAGATTGCTCACATTGATAATCTCCGGGTGCTGGATTTGAGTGGGAATGGGTTCTCTGGGTCGGTGCCGGAGGAGTTTTTCCGGCAATGTGGGTCCCTCAGAGTGGTTTCTTTGGCGGGTAATAAGTTTTCCGGGAAGATTCCGGAGAGTTTGGGGGGTTGTGCTGGTCTTGCGACGATTGACTTGAGTTTGAACCAGTTTTCGGGGGAGGTTCCGGCTGGGGTTTGGTCCTTGAATGGGATTAGGTCGCTGGATTTGTCTGGGAATTTGTTGGAGGGTGAAATCCCGGAGGCTATTGAAGGGTTGAATAATCTGAGGGCTATTAATTTGGGGAGGAATCAGTTTTCGGGGCTTGTTCCTGATGGAATTGGGAGCTGTTTGTTGTTGAGGTCTGTTGATCTTAGTGAGAATGGATTCAGTGGGAACCTTCCGCGGACAATGCGGGGACTTGGTCTGTGTGGAGCTCTGAATGTGCAGAAGAATTCGCTTTCGGGTGAGCTTCCTGAGTGGATTGGAGAGATGAAGAGCCTGGAGACTTTGGACATTTCCAGCAATAGGTTTTCGGGTGAAGTTCCGAGTTCATTGGGGAATCTTGGAGCTTTGAAGGTGTTGAATTTTTCTGGAAATGGGTTCGCTGGGAGCTTGCCCAAGTCTTTGGTCAATTGCACAAGCCTTTTGGCTTTGGATTTCAGTAAGAATTCTTTGGAGGGTGACCTTCCTGAGTGGATGTTCAAGGCTGGTTTAGAGGGAGTTTTAGTTTCAGGGAAGAAGCTAAGCGGAAGTAGTCCATCTTCTTCCCTGAAACTGCCATTGGGGCTTCAGAAACTTGAGGTGTTAGATTTATCCGGTAATGGTTTTTCCGGTAAGATTACATCTGCCATTGGGGCCTTGAGCAGCTTACATGTTTTGAACCTTTCCGACAACTCTCTTGTTGGTCCTGTTCCTGCAAGTATTGGAGAGTTGAAGGCCCTTGATAGTCTTGATATGAGTGAGAATCAGCTCAGCGGCAGCATTCCTCCGGAGATTGGTGGGGCTTATGCTTTGAAGGAATTGAGATTGGAAAAGAACTTCCTCACCGGAAAAATTCCAACTTCAATTGAGAACTGTTCTTCTCTTACCACTTTGATTGTATCACAGAATAAACTCTTTGGCCCCATACCTGCTGCTGTAGGCAAACTTAGCAACTTGCAATATGTGGACTTGTCTTTCAATAACCTCTCGGGAGCCCTTCCAAAGCAGTTGGCAAATCTTCCCAACATCGTCTCCTTCAATATTTCCCACAACAACCTCCAGGGCGAATTACCGTCGGGTGGCTTTTTCAACACCATCTCCCCTTCTAGTGTCTTGGCCAATCCATCTCTTTGTGGCTCTGCAGTTAATAAGTCTTGCCCTGCAGTCCTTCCCAAACCCATTGTGCTCAATCCCAATTCCTCTTCTGACTCCAGCACGGGTGCATTGCCTTCAAAGTTTGGTCATAAAAGAATCATCCTCAGCATTTCTGCTCTCATTGCGATTGGTGCAGCCGCTTTCATTGTCATTGGTGTTATTGCCATCACTGTGCTTAATCTTCGTGTACGGACATCCACTTCTCGTCCTCCAGCTGCTATCACATTTTCTGGTGGGGATGACTTCAGCAATTCCCCCACTACAGACGCCAACTCCGGTAAACTTGTCATGTTTTCGGGTGACCCTGACTTCAGCACTGGTGCACATGCTCTACTCAACAAGGACTGTGAGCTTGGACGTGGTGGGTTTGGAGCAGTCTACCGGACAGTTCTTCGAGATGGACGGTCTGTTGCAATCAAGAAGCTCACTGTTTCAAGTCTTGTCAAGTCTCAAGAAGAATTTGAAAGGGAAGTTAAGAAATTAGGAAAAGTGAGGCATGATAATCTTGTGGAGATTGAAGGCTATTACTGGACACCATCATTGCAGCTCATCATATATGAATATGTATCTGGTGGTAGTTTGTATAAGCATCTTCATGATAGCGCGGGTGGAAACTTCCTTTCATGGAATGACAGGTTCAACATAATTCTGGGAACTGCAAAGAGTTTGGCTCACTTGCATCAGATGAACATAATCCACTACAATATAAAATCTAGCAATGTCCTGATCAGCGACTCAGGTGAACCCAAAGTGGGAGACTTTGGCCTGGCAAGGTTGTTGCCCATGCTTGACCGATATGTTCTGAGCAGCAAGATCCAGAGCGCCCTTGGCTACATGGCACCAGAGTTCGCTTGCAAAACAGTAAAGATAACTGAGAAATGTGATGTCTATGGGTTTGGTGTTTTGGTTCTAGAGGTGGTTACGGGGAAAAGGCCTGTCGAGTACATGGAAGATGATGTTGTGGTTCTCTGTGACATGGTCAGAGGAGCGTTAGAAGAAGGCAGGGTAGAGGAATGTATTGATTCTAGGCTCCAGGGAAGTTTCCCTGCAGAAGAAGCTATTCCTGTCATGAAATTAGGGTTGATATGCACATCGCAAGTGCCATCAAACAGACCCGACATGGGAGAGGTTGTCAACATATTGGAGCTGATCAGATGTCCTTCAGAAGGCCAAGAAGAATCAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

970

Amino Acids

102.87

Weight (kDa)

5.74

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 66 3.9e-11 Leucine rich repeat N-terminal domain
LRR_4 PF12799 94 - 128 1e-05 Leucine Rich repeats (2 copies)
LRR_8 PF13855 144 - 203 9.6e-06 Leucine rich repeat
LRR_8 PF13855 193 - 250 2.2e-06 Leucine rich repeat
LRR_14 PF23598 275 - 342 2.5e-07 Leucine-rich repeat region
LRR_14 PF23598 385 - 545 9.4e-12 Leucine-rich repeat region
LRR_8 PF13855 387 - 446 1.2e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 688 - 954 2.6e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 689 - 893 7.6e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013923)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G56370
fragaria_vesca FvH4_7g25950
malus_domestica MD01G1167900.v1.1 MD07G1233900.v1.1
prunus_persica Prupe.2G264300_v2.0.a1
pyrus_communis pycom01g18090 pycom07g21170
rosa_chinensis RchiOBHm_Chr1g0372331
rosa_laevigata RLG00000026907
rosa_multiflora Rmu_sc0001755.1_g000008
rosa_roxburghii Rroxscaffold_4G00285050
rosa_rugosa Rorug01G0371200
rosa_samantha Rh1AG379600 Rh1BG343100 Rh1CG356600 Rh1DG374300
rosa_wichuraiana Rw1G033370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1504
AccB1I GGYRCC 2 cut(s) 400, 2560
AccI GTMKAC 1 cut(s) 2100
AccII CGCG 2 cut(s) 769, 2327
AccIII TCCGGA 2 cut(s) 478, 1354
AciI CCGC 9 cut(s) 174, 452, 767, 769, 778, 1113, 1341, 1860, 2327
AclWI GGATC 4 cut(s) 54, 119, 198, 2530
AcoI YGGCCR 3 cut(s) 250, 259, 1683
AcsI RAATTY 6 cut(s) 601, 817, 949, 1033, 1419, 2180
AcuI CTGAAG 5 cut(s) 257, 1139, 1951, 2017, 2868
AcyI GRCGYC 1 cut(s) 1989
AfaI GTAC 2 cut(s) 1911, 2666
AflIII ACRYGT 1 cut(s) 1237
AjiI CACGTC 1 cut(s) 2081
AjnI CCWGG 4 cut(s) 864, 1626, 2487, 2754
AjuI GAANNNNNNNTTGG 2 cut(s) 1130, 1162
Alw21I GWGCWC 4 cut(s) 225, 802, 1755, 2047
Alw26I GTCTC 5 cut(s) 288, 863, 1603, 2175, 2472
Alw44I GTGCAC 1 cut(s) 2043
AlwI GGATC 4 cut(s) 54, 119, 198, 2530
Ama87I CYCGRG 1 cut(s) 1555
Aor13HI TCCGGA 2 cut(s) 478, 1354
AoxI GGCC 9 cut(s) 250, 259, 1221, 1302, 1486, 1683, 2485, 2654, 2890
ApaLI GTGCAC 1 cut(s) 2043
ApeKI GCWGC 7 cut(s) 1230, 1344, 1499, 1856, 1937, 2266, 2529
ApoI RAATTY 6 cut(s) 601, 817, 949, 1033, 1419, 2180
AseI ATTAAT 1 cut(s) 660
Asp700I GAANNNNTTC 3 cut(s) 386, 749, 2781
AspLEI GCGC 3 cut(s) 335, 2327, 2546
AspS9I GGNCC 6 cut(s) 429, 564, 1221, 1271, 1303, 1487
AsuC2I CCSGG 4 cut(s) 263, 362, 469, 623
AsuHPI GGTGA 8 cut(s) 310, 626, 842, 914, 1058, 1402, 2033, 2474
AvaI CYCGRG 1 cut(s) 1555
AvaII GGWCC 3 cut(s) 429, 564, 1271
BaeGI GKGCMC 1 cut(s) 2047
BalI TGGCCA 1 cut(s) 1685
BanI GGYRCC 2 cut(s) 400, 2560
BanII GRGCYC 3 cut(s) 225, 802, 1564
BarI GAAGNNNNNNTAC 2 cut(s) 1111, 1143
BbsI GAAGAC 1 cut(s) 162
Bbv12I GWGCWC 4 cut(s) 225, 802, 1755, 2047
BbvCI CCTCAGC 1 cut(s) 1826
BbvI GCAGC 7 cut(s) 1242, 1356, 1486, 1868, 1924, 2278, 2541
BccI CCATC 8 cut(s) 692, 1132, 1670, 1699, 1895, 2114, 2266, 2833
BceAI ACGGC 1 cut(s) 197
BciT130I CCWGG 4 cut(s) 866, 1628, 2489, 2756
BclI TGATCA 2 cut(s) 2448, 2871
BcnI CCSGG 4 cut(s) 263, 362, 469, 623
BcoDI GTCTC 5 cut(s) 288, 863, 1603, 2175, 2472
BfaI CTAG 4 cut(s) 1674, 2436, 2633, 2748
BfmI CTRYAG 5 cut(s) 1503, 1707, 1728, 1983, 2769
BfoI RGCGCY 2 cut(s) 336, 2547
BfuAI ACCTGC 1 cut(s) 1504
BglI GCCNNNNNGGC 3 cut(s) 258, 1150, 1220
BlpI GCTNAGC 2 cut(s) 1109, 1337
Bme1390I CCNGG 8 cut(s) 263, 362, 469, 623, 866, 1628, 2489, 2756
Bme18I GGWCC 3 cut(s) 429, 564, 1271
BmeT110I CYCGRG 1 cut(s) 1555
BmgBI CACGTC 1 cut(s) 2081
BmgT120I GGNCC 6 cut(s) 429, 564, 1221, 1271, 1303, 1487
BmrFI CCNGG 8 cut(s) 263, 362, 469, 623, 866, 1628, 2489, 2756
BmsI GCATC 2 cut(s) 2320, 2410
BoxI GACNNNNGTC 1 cut(s) 165
BpiI GAAGAC 1 cut(s) 162
BplI GAGNNNNNCTC 2 cut(s) 2377, 2409
BpmI CTGGAG 5 cut(s) 887, 1610, 1762, 1917, 2738
Bpu10I CCTNAGC 1 cut(s) 1826
Bpu1102I GCTNAGC 2 cut(s) 1109, 1337
BpuEI CTTGAG 5 cut(s) 349, 541, 1184, 1246, 2157
BpuMI CCSGG 4 cut(s) 263, 362, 469, 623
BsaHI GRCGYC 1 cut(s) 1989
BsaJI CCNNGG 6 cut(s) 129, 262, 767, 1627, 2548, 2755
BsaWI WCCGGW 8 cut(s) 320, 478, 1181, 1196, 1354, 1412, 1997, 2103
Bse1I ACTGG 3 cut(s) 532, 2044, 2255
Bse3DI GCAATG 5 cut(s) 428, 1790, 1842, 2261, 2446
BseAI TCCGGA 2 cut(s) 478, 1354
BseBI CCWGG 4 cut(s) 866, 1628, 2489, 2756
BseDI CCNNGG 6 cut(s) 129, 262, 767, 1627, 2548, 2755
BseGI GGATG 4 cut(s) 1068, 1821, 1916, 1966
BseMI GCAATG 5 cut(s) 428, 1790, 1842, 2261, 2446
BseMII CTCAG 9 cut(s) 448, 641, 831, 1047, 1351, 1840, 2472, 2516, 2586
BseNI ACTGG 3 cut(s) 532, 2044, 2255
BseRI GAGGAG 2 cut(s) 422, 2721
BseSI GKGCMC 1 cut(s) 2047
BseXI GCAGC 7 cut(s) 1242, 1356, 1486, 1868, 1924, 2278, 2541
BseYI CCCAGC 3 cut(s) 177, 554, 971
BsgI GTGCAG 2 cut(s) 830, 1875
Bsh1236I CGCG 2 cut(s) 769, 2327
BshFI GGCC 9 cut(s) 252, 261, 1223, 1304, 1488, 1685, 2487, 2656, 2892
BshNI GGYRCC 2 cut(s) 400, 2560
BsiHKAI GWGCWC 4 cut(s) 225, 802, 1755, 2047
BsiHKCI CYCGRG 1 cut(s) 1555
BslFI GGGAC 3 cut(s) 25, 415, 795
BsmAI GTCTC 5 cut(s) 288, 863, 1603, 2175, 2472
BsmBI CGTCTC 1 cut(s) 1603
BsmFI GGGAC 3 cut(s) 25, 415, 795
BsmI GAATGC 1 cut(s) 1347
BsnI GGCC 9 cut(s) 252, 261, 1223, 1304, 1488, 1685, 2487, 2656, 2892
BsoBI CYCGRG 1 cut(s) 1555
Bsp1286I GDGCHC 5 cut(s) 225, 802, 1564, 1755, 2047
Bsp13I TCCGGA 2 cut(s) 478, 1354
Bsp143I GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
Bsp1720I GCTNAGC 2 cut(s) 1109, 1337
BspACI CCGC 9 cut(s) 174, 452, 767, 769, 778, 1113, 1341, 1860, 2327
BspANI GGCC 9 cut(s) 252, 261, 1223, 1304, 1488, 1685, 2487, 2656, 2892
BspCNI CTCAG 9 cut(s) 447, 642, 832, 1048, 1350, 1839, 2471, 2517, 2587
BspEI TCCGGA 2 cut(s) 478, 1354
BspFNI CGCG 2 cut(s) 769, 2327
BspHI TCATGA 2 cut(s) 2317, 2790
BspMAI CTGCAG 3 cut(s) 1711, 1732, 2773
BspMI ACCTGC 1 cut(s) 1504
BspPI GGATC 4 cut(s) 54, 119, 198, 2530
BspQI GCTCTTC 1 cut(s) 854
BspT107I GGYRCC 2 cut(s) 400, 2560
BsrDI GCAATG 5 cut(s) 428, 1790, 1842, 2261, 2446
BsrI ACTGG 3 cut(s) 532, 2044, 2255
BssECI CCNNGG 6 cut(s) 129, 262, 767, 1627, 2548, 2755
BssMI GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
BssNI GRCGYC 1 cut(s) 1989
BssT1I CCWWGG 2 cut(s) 129, 2548
Bst2UI CCWGG 4 cut(s) 866, 1628, 2489, 2756
Bst6I CTCTTC 3 cut(s) 291, 854, 1774
BstACI GRCGYC 1 cut(s) 1989
BstC8I GCNNGC 4 cut(s) 24, 293, 980, 2575
BstDSI CCRYGG 1 cut(s) 767
BstEII GGTNACC 2 cut(s) 1046, 2021
BstENI CCTNNNNNAGG 1 cut(s) 2886
BstF5I GGATG 4 cut(s) 1068, 1821, 1916, 1966
BstFNI CGCG 2 cut(s) 769, 2327
BstH2I RGCGCY 2 cut(s) 336, 2547
BstHHI GCGC 3 cut(s) 335, 2327, 2546
BstKTI GATC 7 cut(s) 62, 127, 206, 736, 2451, 2538, 2874
BstMAI GTCTC 5 cut(s) 288, 863, 1603, 2175, 2472
BstMBI GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
BstNI CCWGG 4 cut(s) 866, 1628, 2489, 2756
BstNSI RCATGY 2 cut(s) 1241, 2051
BstPAI GACNNNNGTC 1 cut(s) 165
BstPI GGTNACC 2 cut(s) 1046, 2021
BstSCI CCNGG 8 cut(s) 261, 360, 467, 621, 864, 1626, 2487, 2754
BstSFI CTRYAG 5 cut(s) 1503, 1707, 1728, 1983, 2769
BstSLI GKGCMC 1 cut(s) 2047
BstUI CGCG 2 cut(s) 769, 2327
BstV1I GCAGC 7 cut(s) 1242, 1356, 1486, 1868, 1924, 2278, 2541
BstV2I GAAGAC 1 cut(s) 162
BstX2I RGATCY 4 cut(s) 59, 124, 203, 2535
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 4 cut(s) 59, 124, 203, 2535
BsuRI GGCC 9 cut(s) 252, 261, 1223, 1304, 1488, 1685, 2487, 2656, 2892
BtgI CCRYGG 1 cut(s) 767
BtgZI GCGATG 1 cut(s) 2799
BtrI CACGTC 1 cut(s) 2081
BtsCI GGATG 4 cut(s) 1068, 1821, 1916, 1966
BtsIMutI CAGTG 4 cut(s) 760, 1890, 2037, 2148
BveI ACCTGC 1 cut(s) 1504
Cac8I GCNNGC 4 cut(s) 24, 293, 980, 2575
CciI TCATGA 2 cut(s) 2317, 2790
CfoI GCGC 3 cut(s) 335, 2327, 2546
Cfr13I GGNCC 6 cut(s) 429, 564, 1221, 1271, 1303, 1487
Cfr42I CCGCGG 1 cut(s) 770
CseI GACGC 1 cut(s) 1997
Csp6I GTAC 2 cut(s) 1910, 2665
CspCI CAANNNNNGTGG 2 cut(s) 1444, 1479
CviQI GTAC 2 cut(s) 1910, 2665
DpnI GATC 7 cut(s) 61, 126, 205, 735, 2450, 2537, 2873
DpnII GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
EaeI YGGCCR 3 cut(s) 250, 259, 1683
Eam1104I CTCTTC 3 cut(s) 291, 854, 1774
EarI CTCTTC 3 cut(s) 291, 854, 1774
Ecl136II GAGCTC 2 cut(s) 223, 800
Eco130I CCWWGG 2 cut(s) 129, 2548
Eco147I AGGCCT 1 cut(s) 2656
Eco24I GRGCYC 3 cut(s) 225, 802, 1564
Eco47I GGWCC 3 cut(s) 429, 564, 1271
Eco53kI GAGCTC 2 cut(s) 223, 800
Eco57I CTGAAG 5 cut(s) 257, 1139, 1951, 2017, 2868
Eco88I CYCGRG 1 cut(s) 1555
Eco91I GGTNACC 2 cut(s) 1046, 2021
EcoICRI GAGCTC 2 cut(s) 223, 800
EcoNI CCTNNNNNAGG 1 cut(s) 2886
EcoO109I RGGNCCY 3 cut(s) 429, 1221, 1303
EcoO65I GGTNACC 2 cut(s) 1046, 2021
EcoRI GAATTC 2 cut(s) 817, 1033
EcoRII CCWGG 4 cut(s) 864, 1626, 2487, 2754
EcoT14I CCWWGG 2 cut(s) 129, 2548
EcoT38I GRGCYC 3 cut(s) 225, 802, 1564
ErhI CCWWGG 2 cut(s) 129, 2548
Esp3I CGTCTC 1 cut(s) 1603
FaqI GGGAC 3 cut(s) 25, 415, 795
FauI CCCGC 3 cut(s) 445, 771, 2320
FbaI TGATCA 2 cut(s) 2448, 2871
FblI GTMKAC 1 cut(s) 2100
FokI GGATG 4 cut(s) 1075, 1808, 1903, 1973
FriOI GRGCYC 3 cut(s) 225, 802, 1564
FspBI CTAG 4 cut(s) 1674, 2436, 2633, 2748
GlaI GCGC 3 cut(s) 334, 2326, 2545
GsaI CCCAGC 3 cut(s) 181, 558, 975
GsuI CTGGAG 5 cut(s) 887, 1610, 1762, 1917, 2738
HaeII RGCGCY 2 cut(s) 336, 2547
HaeIII GGCC 9 cut(s) 252, 261, 1223, 1304, 1488, 1685, 2487, 2656, 2892
HgaI GACGC 1 cut(s) 1997
HhaI GCGC 3 cut(s) 335, 2327, 2546
Hin1I GRCGYC 1 cut(s) 1989
Hin6I GCGC 3 cut(s) 333, 2325, 2544
HinP1I GCGC 3 cut(s) 333, 2325, 2544
HincII GTYRAC 2 cut(s) 190, 2857
HindII GTYRAC 2 cut(s) 190, 2857
HindIII AAGCTT 1 cut(s) 325
HpaI GTTAAC 1 cut(s) 190
HphI GGTGA 8 cut(s) 310, 626, 842, 914, 1058, 1402, 2033, 2474
Hpy166II GTNNAC 8 cut(s) 190, 1534, 1910, 2003, 2045, 2101, 2465, 2857
Hpy8I GTNNAC 8 cut(s) 190, 1534, 1910, 2003, 2045, 2101, 2465, 2857
Hpy99I CGWCG 8 cut(s) 76, 86, 89, 164, 218, 236, 514, 1645
HpyCH4IV ACGT 2 cut(s) 87, 2080
HpySE526I ACGT 2 cut(s) 87, 2080
Hsp92I GRCGYC 1 cut(s) 1989
HspAI GCGC 3 cut(s) 333, 2325, 2544
KflI GGGWCCC 1 cut(s) 429
Kpn2I TCCGGA 2 cut(s) 478, 1354
Ksp22I TGATCA 2 cut(s) 2448, 2871
KspAI GTTAAC 1 cut(s) 190
KspI CCGCGG 1 cut(s) 770
Kzo9I GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
LguI GCTCTTC 1 cut(s) 854
Lsp1109I GCAGC 7 cut(s) 1242, 1356, 1486, 1868, 1924, 2278, 2541
LweI GCATC 2 cut(s) 2320, 2410
MaeI CTAG 4 cut(s) 1674, 2436, 2633, 2748
MaeII ACGT 2 cut(s) 87, 2080
MaeIII GTNAC 6 cut(s) 15, 276, 1046, 2021, 2641, 2693
MalI GATC 7 cut(s) 61, 126, 205, 735, 2450, 2537, 2873
MboI GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
MfeI CAATTG 2 cut(s) 997, 1431
MflI RGATCY 4 cut(s) 59, 124, 203, 2535
MhlI GDGCHC 5 cut(s) 225, 802, 1564, 1755, 2047
MlsI TGGCCA 1 cut(s) 1685
MluNI TGGCCA 1 cut(s) 1685
MlyI GAGTC 2 cut(s) 1769, 2450
MmeI TCCRAC 5 cut(s) 163, 231, 588, 1278, 1448
Mox20I TGGCCA 1 cut(s) 1685
MroI TCCGGA 2 cut(s) 478, 1354
MroXI GAANNNNTTC 3 cut(s) 386, 749, 2781
MscI TGGCCA 1 cut(s) 1685
MseI TTAA 5 cut(s) 189, 660, 1713, 1899, 2196
MslI CAYNNNNRTG 2 cut(s) 1892, 2316
Msp20I TGGCCA 1 cut(s) 1685
MspA1I CMGCKG 3 cut(s) 769, 1341, 1937
MspR9I CCNGG 8 cut(s) 263, 362, 469, 623, 866, 1628, 2489, 2756
MunI CAATTG 2 cut(s) 997, 1431
Mva1269I GAATGC 1 cut(s) 1347
MvaI CCWGG 4 cut(s) 866, 1628, 2489, 2756
MvnI CGCG 2 cut(s) 769, 2327
NciI CCSGG 4 cut(s) 263, 362, 469, 623
NdeII GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
NmuCI GTSAC 3 cut(s) 1046, 2021, 2693
NspI RCATGY 2 cut(s) 1241, 2051
PagI TCATGA 2 cut(s) 2317, 2790
PceI AGGCCT 1 cut(s) 2656
PciI ACATGT 1 cut(s) 1237
PciSI GCTCTTC 1 cut(s) 854
PctI GAATGC 1 cut(s) 1347
PdmI GAANNNNTTC 3 cut(s) 386, 749, 2781
PfeI GAWTC 8 cut(s) 475, 673, 750, 925, 1330, 1818, 2744, 2900
PflFI GACNNNGTC 2 cut(s) 786, 2699
PfoI TCCNGGA 2 cut(s) 467, 621
PleI GAGTC 2 cut(s) 1769, 2450
PpsI GAGTC 2 cut(s) 1769, 2450
PpuMI RGGWCCY 1 cut(s) 429
PscI ACATGT 1 cut(s) 1237
PshAI GACNNNNGTC 1 cut(s) 165
PshBI ATTAAT 1 cut(s) 660
Psp124BI GAGCTC 2 cut(s) 225, 802
Psp5II RGGWCCY 1 cut(s) 429
Psp6I CCWGG 4 cut(s) 864, 1626, 2487, 2754
PspEI GGTNACC 2 cut(s) 1046, 2021
PspFI CCCAGC 3 cut(s) 177, 554, 971
PspGI CCWGG 4 cut(s) 864, 1626, 2487, 2754
PspPI GGNCC 6 cut(s) 429, 564, 1221, 1271, 1303, 1487
PspPPI RGGWCCY 1 cut(s) 429
PstI CTGCAG 3 cut(s) 1711, 1732, 2773
PsuI RGATCY 4 cut(s) 59, 124, 203, 2535
PsyI GACNNNGTC 2 cut(s) 786, 2699
PvuII CAGCTG 1 cut(s) 1937
RsaI GTAC 2 cut(s) 1911, 2666
RsaNI GTAC 2 cut(s) 1910, 2665
RseI CAYNNNNRTG 2 cut(s) 1892, 2316
SacI GAGCTC 2 cut(s) 225, 802
SacII CCGCGG 1 cut(s) 770
SapI GCTCTTC 1 cut(s) 854
SaqAI TTAA 5 cut(s) 189, 660, 1713, 1899, 2196
Sau3AI GATC 7 cut(s) 59, 124, 203, 733, 2448, 2535, 2871
Sau96I GGNCC 6 cut(s) 429, 564, 1221, 1271, 1303, 1487
SchI GAGTC 2 cut(s) 1769, 2450
ScrFI CCNGG 8 cut(s) 263, 362, 469, 623, 866, 1628, 2489, 2756
SduI GDGCHC 5 cut(s) 225, 802, 1564, 1755, 2047
SfaNI GCATC 2 cut(s) 2320, 2410
SfcI CTRYAG 5 cut(s) 1503, 1707, 1728, 1983, 2769
SfiI GGCCNNNNNGGCC 1 cut(s) 258
Sfr303I CCGCGG 1 cut(s) 770
SgrBI CCGCGG 1 cut(s) 770
SinI GGWCC 3 cut(s) 429, 564, 1271
SmiMI CAYNNNNRTG 2 cut(s) 1892, 2316
SmlI CTYRAG 5 cut(s) 328, 520, 1163, 1225, 2172
SmoI CTYRAG 5 cut(s) 328, 520, 1163, 1225, 2172
SseBI AGGCCT 1 cut(s) 2656
SsiI CCGC 9 cut(s) 174, 452, 767, 769, 778, 1113, 1341, 1860, 2327
SspI AATATT 1 cut(s) 1609
SspMI CTAG 4 cut(s) 1674, 2436, 2633, 2748
SstI GAGCTC 2 cut(s) 225, 802
StuI AGGCCT 1 cut(s) 2656
StyD4I CCNGG 8 cut(s) 261, 360, 467, 621, 864, 1626, 2487, 2754
StyI CCWWGG 2 cut(s) 129, 2548
TaiI ACGT 2 cut(s) 90, 2083
TaqI TCGA 4 cut(s) 231, 305, 2116, 2661
TaqII GACCGA 1 cut(s) 2529
TatI WGTACW 1 cut(s) 2664
TauI GCSGC 3 cut(s) 177, 1344, 1862
TfiI GAWTC 8 cut(s) 475, 673, 750, 925, 1330, 1818, 2744, 2900
Tru1I TTAA 5 cut(s) 189, 660, 1713, 1899, 2196
Tru9I TTAA 5 cut(s) 189, 660, 1713, 1899, 2196
TscAI CASTG 4 cut(s) 760, 1897, 2044, 2155
TseFI GTSAC 3 cut(s) 1046, 2021, 2693
TseI GCWGC 7 cut(s) 1230, 1344, 1499, 1856, 1937, 2266, 2529
Tsp45I GTSAC 3 cut(s) 1046, 2021, 2693
TspGWI ACGGA 1 cut(s) 1927
TspRI CASTG 4 cut(s) 760, 1897, 2044, 2155
Tth111I GACNNNGTC 2 cut(s) 786, 2699
VneI GTGCAC 1 cut(s) 2043
VpaK11BI GGWCC 3 cut(s) 429, 564, 1271
VspI ATTAAT 1 cut(s) 660
XagI CCTNNNNNAGG 1 cut(s) 2886
XapI RAATTY 6 cut(s) 601, 817, 949, 1033, 1419, 2180
XbaI TCTAGA 1 cut(s) 2632
XceI RCATGY 2 cut(s) 1241, 2051
XcmI CCANNNNNNNNNTGG 3 cut(s) 136, 214, 2546
XmiI GTMKAC 1 cut(s) 2100
XmnI GAANNNNTTC 3 cut(s) 386, 749, 2781
XspI CTAG 4 cut(s) 1674, 2436, 2633, 2748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.