Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009472

Physical Location & Seq

Genomic Coordinates Forward (+)

21671433 .. 21675090

Gene Structure 3658 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCGGCGGCTACTTCATCCATCGCTCCTTCTCTTTCATGCCCATCTCCTTCTTCTTCATCCAAAACCCTTTGGTCTTCCAAAGCCAGAACCTTGGCTCTACCCAATATCGGTTTCCTCTCGTCTTCTTCCAAGTCTCTGAGGTCGCTTACTGCCACCGTCGCTGGAAATGGCGCCACTGGATCCTCCCTTGCCGCTCGCATGGTTTCTTCGTCTGCGGTCAAAGCCCCTGTTTCTCTCGATTTTGAGACATCTGTCTTCAAAAAGGAGAAAGTTTCTCTTGCTGGTTACGAAGAGTACATTGTGAGAGGAGGAAGAGACTTGTTCAAGCATCTCCCAGATGCTTTCAAGGGGATTAAGCAGATTGGTGTGATTGGCTGGGGATCTCAGGGACCTGCCCAGGCTCAGAATTTAAGGGATTCACTTGTGGAGGCAAAGTCTGACATTGTTGTCAAGATTGGTCTCAGAAAAGGGTCTCGCTCATTTGAGGAGGCACGTGCTGCTGGCTTCACTGAAGAAAGTGGTACTTTGGGTGATATATGGGAAACTATCGCTGGCAGTGATCTTGTATTGCTTTTGATCTCTGATGCTGCTCAAGCTGATAACTATGAGAAAATATTCTCTCACATGAAGCCAAACAGCATTCTTGGTTTATCACACGGGTTTCTACTAGGGCATTTACAGTCCTCGGGACTCGATTTCCCAAAGAACATCAGTGTGGTCGCTGTATGCCCTAAGGGAATGGGTCCTTCTGTGAGGAGGCTTTACGTCCAAGGAAAAGAAATTAACGGTGCTGGAATCAACGCCAGTTTTGCAGTCCACCAGGATGTTGACGGTAGAGCCGCCGATGTTGCATTGGGATGGTCAGTAGCACTTGGTTCTCCGTTTACTTTTGCTACTACTCTTGAACAGGAGTACAGGAGTGACATCTTTGGAGAAAGAGGAATTTTGCTTGGTGCTGTTCACGGAATCGTGGAGTCTCTGTTTAGAAGATACACCGAAAATGGGATGAGTGAAGACTTGGCTTACAAGAACACAGTAGAATGCATCACAGGAACAATTTCAAGGACTATCTCTACCCAGGGAATGTTGGCTGTGTACAACTCCTTGTCTGAAGAAGGTAAAAAAGATTTTGAGACTGCATACAGCGCATCCTTCTATCCTTGTATGGAGATTCTCTATGAATGTTACGAGGATGTACAAAGTGGCAGCGAAATCCGAAGTGTTGTCTTAGCCGGTCGTCGCTTCTATGAAAAGGAAGGCTTGCCAGCATTCCCTATGGGAAATATTGACCAGACAAGAATGTGGAAGGTGGGTGAACGCGTCAGGAAGTCCAGACCTGCTGGTGACTTGGGTCCATTGTATCCCTTCACCGCTGGAGTTTATGTAGCACTTATGATGGCTCAGATTGAGATCTTGAGGAAGAAAGGTCACTCTTACTCAGAAATCATCAACGAGAGTGTGATTGAATCCGTGGACTCTCTAAACCCATTTATGCACGCCAGGGGAGTGTCCTTCATGGTTGACAACTGCTCAACCACAGCAAGATTGGGTTCGAGGAAATGGGCGCCACGGTTTGACTACATCCTGACCCAACAAGCTCTTGTGGCTGTGGACAGTGGTGCAGCAATCAACAGAGACCTAATCAGTAACTTCTTCTCTGATCCAGTCCATGGTGCCATTGAGGTCTGCGCACAGCTCAGGCCTACCGTTGATATCTCTGTGCCTGCTGATGCAGACTTTGTTCGACCTGAGTTGCGTCAATCTAGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0010035 GO:0010038 GO:0030312 GO:0031967 GO:0031975 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

IlvC IlvN

Protein Analysis

591

Amino Acids

63.81

Weight (kDa)

6.36

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KARI_N	PF07991	120 - 294	2.6e-31	Acetohydroxy acid isomeroreductase, NADPH-binding domain
KARI_C	PF01450	303 - 447	1.1e-35	Ketol-acid reductoisomerase, C-terminal domain
KARI_C	PF01450	460 - 528	1.4e-06	Ketol-acid reductoisomerase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009472)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58610 AT3G58610 AT3G58610
fragaria_vesca	FvH4_6g27150 FvH4_6g27150
malus_domestica	MD09G1239300.v1.1 MD17G1231900.v1.1 MD17G1232500.v1.1
prunus_persica	Prupe.3G122300_v2.0.a1 Prupe.3G122300_v2.0.a1
pyrus_communis	pycom09g15800 pycom17g23520
rosa_chinensis	RchiOBHm_Chr2g0129141
rosa_laevigata	RLG00000019058 RLG00000019060
rosa_multiflora	Rmu_sc0003479.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114800
rosa_rugosa	Rorug02G0285100
rosa_samantha	Rh2BG345200 Rh2CG324600 Rh2DG362000
rosa_wichuraiana	Rw2G027350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	449
Acc16I	TGCGCA	1 cut(s)	1693
Acc36I	ACCTGC	2 cut(s)	403, 1348
AccB1I	GGYRCC	3 cut(s)	173, 1567, 1676
AccB7I	CCANNNNNTGG	1 cut(s)	1673
AccBSI	CCGCTC	1 cut(s)	197
AccII	CGCG	1 cut(s)	1323
AciI	CCGC	6 cut(s)	5, 8, 195, 218, 843, 1374
AclWI	GGATC	4 cut(s)	177, 190, 391, 1658
AcsI	RAATTY	2 cut(s)	409, 945
AcuI	CTGAAG	2 cut(s)	534, 1134
AcvI	CACGTG	1 cut(s)	497
AcyI	GRCGYC	2 cut(s)	174, 1568
AfaI	GTAC	5 cut(s)	299, 526, 917, 1100, 1200
AfiI	CCNNNNNNNGG	3 cut(s)	110, 1005, 1673
AflIII	ACRYGT	1 cut(s)	1321
AgsI	TTSAA	6 cut(s)	262, 328, 349, 908, 1065, 1469
AjnI	CCWGG	4 cut(s)	399, 822, 1080, 1502
AjuI	GAANNNNNNNTTGG	2 cut(s)	98, 130
AluBI	AGCT	3 cut(s)	599, 1601, 1699
AluI	AGCT	3 cut(s)	599, 1601, 1699
Alw26I	GTCTC	8 cut(s)	141, 242, 312, 467, 480, 984, 1130, 1632
AlwI	GGATC	4 cut(s)	177, 190, 391, 1658
Ama87I	CYCGRG	1 cut(s)	688
AoxI	GGCC	1 cut(s)	1703
ApeKI	GCWGC	4 cut(s)	500, 590, 1209, 1625
ApoI	RAATTY	2 cut(s)	409, 945
Asp700I	GAANNNNTTC	2 cut(s)	617, 1060
AspLEI	GCGC	4 cut(s)	176, 1151, 1570, 1694
AspS9I	GGNCC	3 cut(s)	392, 746, 1355
AsuHPI	GGTGA	4 cut(s)	545, 1328, 1358, 1363
AvaI	CYCGRG	1 cut(s)	688
AvaII	GGWCC	3 cut(s)	392, 746, 1355
AxyI	CCTNAGG	1 cut(s)	735
BamHI	GGATCC	1 cut(s)	182
BanI	GGYRCC	3 cut(s)	173, 1567, 1676
BbrPI	CACGTG	1 cut(s)	497
BbsI	GAAGAC	4 cut(s)	69, 117, 250, 1023
BbvI	GCAGC	4 cut(s)	487, 577, 1221, 1637
BccI	CCATC	4 cut(s)	29, 52, 855, 1393
BciT130I	CCWGG	4 cut(s)	401, 824, 1082, 1504
BciVI	GTATCC	1 cut(s)	1374
BcoDI	GTCTC	8 cut(s)	141, 242, 312, 467, 480, 984, 1130, 1632
BfaI	CTAG	2 cut(s)	671, 1767
BfoI	RGCGCY	2 cut(s)	177, 1571
BfuAI	ACCTGC	2 cut(s)	403, 1348
BfuI	GTATCC	1 cut(s)	1374
BglII	AGATCT	1 cut(s)	1413
BisI	GCNGC	8 cut(s)	6, 9, 195, 501, 591, 843, 1210, 1626
BlsI	GCNGC	8 cut(s)	7, 10, 196, 502, 592, 844, 1211, 1627
Bme1390I	CCNGG	4 cut(s)	401, 824, 1082, 1504
Bme18I	GGWCC	3 cut(s)	392, 746, 1355
BmeT110I	CYCGRG	1 cut(s)	688
BmgT120I	GGNCC	3 cut(s)	392, 746, 1355
BmiI	GGNNCC	7 cut(s)	175, 184, 393, 747, 1356, 1569, 1678
BmrFI	CCNGG	4 cut(s)	401, 824, 1082, 1504
BmsI	GCATC	6 cut(s)	331, 340, 577, 1056, 1160, 1723
BoxI	GACNNNNGTC	2 cut(s)	254, 1353
BpiI	GAAGAC	4 cut(s)	69, 117, 250, 1023
BpmI	CTGGAG	1 cut(s)	1398
Bpu10I	CCTNAGC	1 cut(s)	1700
BpuEI	CTTGAG	2 cut(s)	579, 1438
BsaAI	YACGTR	1 cut(s)	497
BsaBI	GATNNNNATC	1 cut(s)	1412
BsaHI	GRCGYC	2 cut(s)	174, 1568
BsaI	GGTCTC	3 cut(s)	467, 480, 1632
BsaXI	ACNNNNNCTCC	6 cut(s)	422, 452, 968, 998, 1371, 1401
Bsc4I	CCNNNNNNNGG	3 cut(s)	110, 1005, 1673
Bse118I	RCCGGY	1 cut(s)	1235
Bse1I	ACTGG	3 cut(s)	184, 807, 1667
Bse21I	CCTNAGG	1 cut(s)	735
Bse8I	GATNNNNATC	1 cut(s)	1412
BseBI	CCWGG	4 cut(s)	401, 824, 1082, 1504
BseGI	GGATG	8 cut(s)	17, 59, 832, 866, 1014, 1151, 1201, 1584
BseJI	GATNNNNATC	1 cut(s)	1412
BseLI	CCNNNNNNNGG	3 cut(s)	110, 1005, 1673
BseMII	CTCAG	8 cut(s)	131, 401, 419, 478, 1418, 1455, 1714, 1743
BseNI	ACTGG	3 cut(s)	184, 807, 1667
BseRI	GAGGAG	3 cut(s)	324, 503, 772
BseXI	GCAGC	4 cut(s)	487, 577, 1221, 1637
BseYI	CCCAGC	1 cut(s)	378
BsgI	GTGCAG	1 cut(s)	1644
Bsh1236I	CGCG	1 cut(s)	1323
Bsh1285I	CGRYCG	1 cut(s)	1240
BshFI	GGCC	1 cut(s)	1705
BshNI	GGYRCC	3 cut(s)	173, 1567, 1676
BsiEI	CGRYCG	1 cut(s)	1240
BsiHKCI	CYCGRG	1 cut(s)	688
BsiSI	CCGG	1 cut(s)	1236
BslFI	GGGAC	2 cut(s)	405, 705
BslI	CCNNNNNNNGG	3 cut(s)	110, 1005, 1673
BsmAI	GTCTC	8 cut(s)	141, 242, 312, 467, 480, 984, 1130, 1632
BsmFI	GGGAC	2 cut(s)	405, 705
BsmI	GAATGC	3 cut(s)	642, 1049, 1271
BsnI	GGCC	1 cut(s)	1705
Bso31I	GGTCTC	3 cut(s)	467, 480, 1632
BsoBI	CYCGRG	1 cut(s)	688
Bsp1407I	TGTACA	2 cut(s)	1098, 1198
Bsp143I	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
Bsp19I	CCATGG	1 cut(s)	1672
BspACI	CCGC	6 cut(s)	5, 8, 195, 218, 843, 1374
BspANI	GGCC	1 cut(s)	1705
BspCNI	CTCAG	8 cut(s)	132, 400, 418, 477, 1417, 1454, 1713, 1744
BspFNI	CGCG	1 cut(s)	1323
BspLI	GGNNCC	7 cut(s)	175, 184, 393, 747, 1356, 1569, 1678
BspMI	ACCTGC	2 cut(s)	403, 1348
BspPI	GGATC	4 cut(s)	177, 190, 391, 1658
BspT107I	GGYRCC	3 cut(s)	173, 1567, 1676
BspTNI	GGTCTC	3 cut(s)	467, 480, 1632
BsrBI	CCGCTC	1 cut(s)	197
BsrFI	RCCGGY	1 cut(s)	1235
BsrGI	TGTACA	2 cut(s)	1098, 1198
BsrI	ACTGG	3 cut(s)	184, 807, 1667
BssAI	RCCGGY	1 cut(s)	1235
BssMI	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
BssNI	GRCGYC	2 cut(s)	174, 1568
BssT1I	CCWWGG	3 cut(s)	93, 772, 1672
Bst2UI	CCWGG	4 cut(s)	401, 824, 1082, 1504
Bst4CI	ACNGT	8 cut(s)	160, 684, 791, 836, 1039, 1575, 1619, 1711
Bst6I	CTCTTC	2 cut(s)	288, 310
BstACI	GRCGYC	2 cut(s)	174, 1568
BstAPI	GCANNNNNTGC	1 cut(s)	500
BstAUI	TGTACA	2 cut(s)	1098, 1198
BstBAI	YACGTR	1 cut(s)	497
BstC8I	GCNNGC	7 cut(s)	199, 505, 556, 1265, 1269, 1500, 1728
BstDSI	CCRYGG	3 cut(s)	1473, 1571, 1672
BstF5I	GGATG	8 cut(s)	17, 59, 832, 866, 1014, 1151, 1201, 1584
BstFNI	CGCG	1 cut(s)	1323
BstH2I	RGCGCY	2 cut(s)	177, 1571
BstHHI	GCGC	4 cut(s)	176, 1151, 1570, 1694
BstKTI	GATC	6 cut(s)	185, 386, 565, 582, 1416, 1666
BstMAI	GTCTC	8 cut(s)	141, 242, 312, 467, 480, 984, 1130, 1632
BstMBI	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
BstMCI	CGRYCG	1 cut(s)	1240
BstMWI	GCNNNNNNNGC	8 cut(s)	161, 224, 500, 596, 812, 851, 1148, 1607
BstNI	CCWGG	4 cut(s)	401, 824, 1082, 1504
BstPAI	GACNNNNGTC	2 cut(s)	254, 1353
BstSCI	CCNGG	4 cut(s)	399, 822, 1080, 1502
BstUI	CGCG	1 cut(s)	1323
BstV1I	GCAGC	4 cut(s)	487, 577, 1221, 1637
BstV2I	GAAGAC	4 cut(s)	69, 117, 250, 1023
BstX2I	RGATCY	3 cut(s)	182, 383, 1413
BstXI	CCANNNNNNTGG	1 cut(s)	94
BstYI	RGATCY	3 cut(s)	182, 383, 1413
Bsu36I	CCTNAGG	1 cut(s)	735
BsuI	GTATCC	1 cut(s)	1374
BsuRI	GGCC	1 cut(s)	1705
BtgI	CCRYGG	3 cut(s)	1473, 1571, 1672
BtgZI	GCGATG	1 cut(s)	7
BtsCI	GGATG	8 cut(s)	17, 59, 832, 866, 1014, 1151, 1201, 1584
BtsI	GCAGTG	1 cut(s)	565
BtsIMutI	CAGTG	5 cut(s)	177, 510, 565, 721, 1624
BveI	ACCTGC	2 cut(s)	403, 1348
Cac8I	GCNNGC	7 cut(s)	199, 505, 556, 1265, 1269, 1500, 1728
CfoI	GCGC	4 cut(s)	176, 1151, 1570, 1694
Cfr10I	RCCGGY	1 cut(s)	1235
Cfr13I	GGNCC	3 cut(s)	392, 746, 1355
CseI	GACGC	2 cut(s)	1312, 1748
Csp6I	GTAC	5 cut(s)	298, 525, 916, 1099, 1199
CviAII	CATG	5 cut(s)	39, 202, 628, 1519, 1673
CviQI	GTAC	5 cut(s)	298, 525, 916, 1099, 1199
DinI	GGCGCC	2 cut(s)	175, 1569
DpnI	GATC	6 cut(s)	184, 385, 564, 581, 1415, 1665
DpnII	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
DrdI	GACNNNNNNGTC	1 cut(s)	449
DseDI	GACNNNNNNGTC	1 cut(s)	449
Eam1104I	CTCTTC	2 cut(s)	288, 310
EarI	CTCTTC	2 cut(s)	288, 310
Eco130I	CCWWGG	3 cut(s)	93, 772, 1672
Eco147I	AGGCCT	1 cut(s)	1705
Eco31I	GGTCTC	3 cut(s)	467, 480, 1632
Eco32I	GATATC	1 cut(s)	1717
Eco47I	GGWCC	3 cut(s)	392, 746, 1355
Eco57I	CTGAAG	2 cut(s)	534, 1134
Eco72I	CACGTG	1 cut(s)	497
Eco81I	CCTNAGG	1 cut(s)	735
Eco88I	CYCGRG	1 cut(s)	688
EcoO109I	RGGNCCY	2 cut(s)	392, 746
EcoRII	CCWGG	4 cut(s)	399, 822, 1080, 1502
EcoRV	GATATC	1 cut(s)	1717
EcoT14I	CCWWGG	3 cut(s)	93, 772, 1672
EcoT22I	ATGCAT	1 cut(s)	1049
EgeI	GGCGCC	2 cut(s)	175, 1569
EheI	GGCGCC	2 cut(s)	175, 1569
ErhI	CCWWGG	3 cut(s)	93, 772, 1672
FaeI	CATG	5 cut(s)	42, 205, 631, 1522, 1676
FalI	AAGNNNNNCTT	6 cut(s)	264, 296, 511, 543, 1247, 1279
FaqI	GGGAC	2 cut(s)	405, 705
FatI	CATG	5 cut(s)	38, 201, 627, 1518, 1672
Fnu4HI	GCNGC	8 cut(s)	6, 9, 195, 501, 591, 843, 1210, 1626
FokI	GGATG	8 cut(s)	4, 46, 839, 873, 1021, 1138, 1208, 1571
Fsp4HI	GCNGC	8 cut(s)	6, 9, 195, 501, 591, 843, 1210, 1626
FspBI	CTAG	2 cut(s)	671, 1767
FspI	TGCGCA	1 cut(s)	1693
GlaI	GCGC	4 cut(s)	175, 1150, 1569, 1693
GluI	GCNGC	8 cut(s)	6, 9, 195, 501, 591, 843, 1210, 1626
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	1 cut(s)	1398
HaeII	RGCGCY	2 cut(s)	177, 1571
HaeIII	GGCC	1 cut(s)	1705
HapII	CCGG	1 cut(s)	1236
HgaI	GACGC	2 cut(s)	1312, 1748
HhaI	GCGC	4 cut(s)	176, 1151, 1570, 1694
Hin1I	GRCGYC	2 cut(s)	174, 1568
Hin1II	CATG	5 cut(s)	42, 205, 631, 1522, 1676
Hin6I	GCGC	4 cut(s)	174, 1149, 1568, 1692
HinP1I	GCGC	4 cut(s)	174, 1149, 1568, 1692
HincII	GTYRAC	2 cut(s)	832, 1525
HindII	GTYRAC	2 cut(s)	832, 1525
HinfI	GANTC	8 cut(s)	419, 693, 798, 969, 977, 1174, 1469, 1478
HpaII	CCGG	1 cut(s)	1236
HphI	GGTGA	4 cut(s)	545, 1328, 1358, 1363
Hpy166II	GTNNAC	9 cut(s)	820, 832, 888, 964, 1099, 1319, 1477, 1525, 1615
Hpy188III	TCNNGA	8 cut(s)	239, 454, 690, 905, 1327, 1335, 1417, 1588
Hpy8I	GTNNAC	9 cut(s)	820, 832, 888, 964, 1099, 1319, 1477, 1525, 1615
Hpy99I	CGWCG	2 cut(s)	164, 1245
HpyAV	CCTTC	9 cut(s)	39, 60, 759, 1112, 1165, 1253, 1303, 1378, 1525
HpyCH4III	ACNGT	8 cut(s)	160, 684, 791, 836, 1039, 1575, 1619, 1711
HpyCH4IV	ACGT	2 cut(s)	496, 768
HpyCH4V	TGCA	7 cut(s)	815, 854, 1047, 1142, 1498, 1625, 1736
HpyF10VI	GCNNNNNNNGC	8 cut(s)	161, 224, 500, 596, 812, 851, 1148, 1607
HpySE526I	ACGT	2 cut(s)	496, 768
Hsp92I	GRCGYC	2 cut(s)	174, 1568
Hsp92II	CATG	5 cut(s)	42, 205, 631, 1522, 1676
HspAI	GCGC	4 cut(s)	174, 1149, 1568, 1692
KasI	GGCGCC	2 cut(s)	173, 1567
Kzo9I	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
LmnI	GCTCC	1 cut(s)	31
Lsp1109I	GCAGC	4 cut(s)	487, 577, 1221, 1637
LweI	GCATC	6 cut(s)	331, 340, 577, 1056, 1160, 1723
MaeI	CTAG	2 cut(s)	671, 1767
MaeII	ACGT	2 cut(s)	496, 768
MaeIII	GTNAC	6 cut(s)	287, 923, 1187, 1346, 1430, 1649
MalI	GATC	6 cut(s)	184, 385, 564, 581, 1415, 1665
MbiI	CCGCTC	1 cut(s)	197
MboI	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
MflI	RGATCY	3 cut(s)	182, 383, 1413
MluCI	AATT	4 cut(s)	409, 783, 945, 1059
MluI	ACGCGT	1 cut(s)	1321
Mly113I	GGCGCC	2 cut(s)	174, 1568
MlyI	GAGTC	3 cut(s)	687, 986, 1472
Mph1103I	ATGCAT	1 cut(s)	1049
MroXI	GAANNNNTTC	2 cut(s)	617, 1060
MseI	TTAA	3 cut(s)	357, 413, 786
MslI	CAYNNNNRTG	3 cut(s)	716, 825, 859
MspA1I	CMGCKG	1 cut(s)	1376
MspI	CCGG	1 cut(s)	1236
MspR9I	CCNGG	4 cut(s)	401, 824, 1082, 1504
Mva1269I	GAATGC	3 cut(s)	642, 1049, 1271
MvaI	CCWGG	4 cut(s)	401, 824, 1082, 1504
MvnI	CGCG	1 cut(s)	1323
MwoI	GCNNNNNNNGC	8 cut(s)	161, 224, 500, 596, 812, 851, 1148, 1607
NarI	GGCGCC	2 cut(s)	174, 1568
NcoI	CCATGG	1 cut(s)	1672
NdeII	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
NlaIII	CATG	5 cut(s)	42, 205, 631, 1522, 1676
NlaIV	GGNNCC	7 cut(s)	175, 184, 393, 747, 1356, 1569, 1678
NmuCI	GTSAC	3 cut(s)	923, 1346, 1430
NsbI	TGCGCA	1 cut(s)	1693
NsiI	ATGCAT	1 cut(s)	1049
PasI	CCCWGGG	1 cut(s)	1081
PceI	AGGCCT	1 cut(s)	1705
PctI	GAATGC	3 cut(s)	642, 1049, 1271
PdmI	GAANNNNTTC	2 cut(s)	617, 1060
PfeI	GAWTC	5 cut(s)	419, 798, 969, 1174, 1469
PflMI	CCANNNNNTGG	1 cut(s)	1673
PkrI	GCNGC	8 cut(s)	7, 10, 196, 502, 592, 844, 1211, 1627
PleI	GAGTC	3 cut(s)	687, 985, 1472
PluTI	GGCGCC	2 cut(s)	177, 1571
PmaCI	CACGTG	1 cut(s)	497
PmlI	CACGTG	1 cut(s)	497
PpsI	GAGTC	3 cut(s)	687, 985, 1472
Ppu21I	YACGTR	1 cut(s)	497
PpuMI	RGGWCCY	2 cut(s)	392, 746
PshAI	GACNNNNGTC	2 cut(s)	254, 1353
Psp5II	RGGWCCY	2 cut(s)	392, 746
Psp6I	CCWGG	4 cut(s)	399, 822, 1080, 1502
PspCI	CACGTG	1 cut(s)	497
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	4 cut(s)	399, 822, 1080, 1502
PspN4I	GGNNCC	7 cut(s)	175, 184, 393, 747, 1356, 1569, 1678
PspPI	GGNCC	3 cut(s)	392, 746, 1355
PspPPI	RGGWCCY	2 cut(s)	392, 746
PsuI	RGATCY	3 cut(s)	182, 383, 1413
RsaI	GTAC	5 cut(s)	299, 526, 917, 1100, 1200
RsaNI	GTAC	5 cut(s)	298, 525, 916, 1099, 1199
RseI	CAYNNNNRTG	3 cut(s)	716, 825, 859
SaqAI	TTAA	3 cut(s)	357, 413, 786
SatI	GCNGC	8 cut(s)	6, 9, 195, 501, 591, 843, 1210, 1626
Sau3AI	GATC	6 cut(s)	182, 383, 562, 579, 1413, 1663
Sau96I	GGNCC	3 cut(s)	392, 746, 1355
SchI	GAGTC	3 cut(s)	687, 986, 1472
ScrFI	CCNGG	4 cut(s)	401, 824, 1082, 1504
SfaNI	GCATC	6 cut(s)	331, 340, 577, 1056, 1160, 1723
SfoI	GGCGCC	2 cut(s)	175, 1569
SinI	GGWCC	3 cut(s)	392, 746, 1355
SmiMI	CAYNNNNRTG	3 cut(s)	716, 825, 859
SmlI	CTYRAG	2 cut(s)	594, 1417
SmoI	CTYRAG	2 cut(s)	594, 1417
Sse9I	AATT	4 cut(s)	409, 783, 945, 1059
SseBI	AGGCCT	1 cut(s)	1705
SsiI	CCGC	6 cut(s)	5, 8, 195, 218, 843, 1374
SspDI	GGCGCC	2 cut(s)	173, 1567
SspI	AATATT	2 cut(s)	618, 1288
SspMI	CTAG	2 cut(s)	671, 1767
StuI	AGGCCT	1 cut(s)	1705
StyD4I	CCNGG	4 cut(s)	399, 822, 1080, 1502
StyI	CCWWGG	3 cut(s)	93, 772, 1672
TaaI	ACNGT	8 cut(s)	160, 684, 791, 836, 1039, 1575, 1619, 1711
TaiI	ACGT	2 cut(s)	499, 771
TaqI	TCGA	4 cut(s)	240, 696, 1556, 1747
TasI	AATT	4 cut(s)	409, 783, 945, 1059
TatI	WGTACW	4 cut(s)	297, 915, 1098, 1198
TauI	GCSGC	4 cut(s)	8, 11, 197, 845
TfiI	GAWTC	5 cut(s)	419, 798, 969, 1174, 1469
Tru1I	TTAA	3 cut(s)	357, 413, 786
Tru9I	TTAA	3 cut(s)	357, 413, 786
TscAI	CASTG	5 cut(s)	184, 517, 565, 721, 1624
TseFI	GTSAC	3 cut(s)	923, 1346, 1430
TseI	GCWGC	4 cut(s)	500, 590, 1209, 1625
Tsp45I	GTSAC	3 cut(s)	923, 1346, 1430
TspDTI	ATGAA	7 cut(s)	6, 27, 48, 644, 1197, 1266, 1507
TspGWI	ACGGA	3 cut(s)	873, 981, 1462
TspRI	CASTG	5 cut(s)	184, 517, 565, 721, 1624
Van91I	CCANNNNNTGG	1 cut(s)	1673
VpaK11BI	GGWCC	3 cut(s)	392, 746, 1355
XapI	RAATTY	2 cut(s)	409, 945
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1546
XmnI	GAANNNNTTC	2 cut(s)	617, 1060
XspI	CTAG	2 cut(s)	671, 1767
Zsp2I	ATGCAT	1 cut(s)	1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.