Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005290

Physical Location & Seq

Genomic Coordinates Forward (+)

21997052 .. 22000737

Gene Structure 3686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G59550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGTTTTATTCACATACGCTTTTGGCTCGAAAGGGTCCATTGGGGACGGTGTGGTGCGCCGCTCATGTGCACCAACGCCTCAAGAAGTCTCAGTACACCTCCATCAACATCCCCGACACTGTTGATAATATAATGTTTCCTGAAGTACCATTGGCATTGAGAACGTCAAGTCACCTTCTAGTTGGGGTAGTGCGAATATATTCAAAGAAAGTGGATTATCTTTACAATGACTGGAATCTCCTTAATACTTGGGTAGCTAAGGCTTTCGTTTCTACTCAAGTTAACTTGCCTGAGGATGCCAGACAGGCCCCGCCTGAGTCTGTTACTTTGCCTCAAGCACTAAATCTGGACGAGTTCGACTTGGAAGATGACACTCTCGACATGGAATTCGATAATCATACTCGGAGTGAGGAAGATATCACTCTCACAGATCAAATTCCTACTGGCATTGATCCTTATGTTGCTGTAACATTCGACGAGGACATCATCTCAGAATCTATCCCGATGGATGTCGACCAATCAACAGAACCTGTGAGTAGGCATACCGGAGAAATTGATGTTGAAACGGCTCATGAGACAGGACCAGACAATGAGCCAAGAGACTCCAATATTGCTTTCGATACTGGAACCTATAGTCCTCGTAACGTCACAGAGGAATTCACTGAAGTCCAGGATCCTAGACAAAGTAACTTGACAGAAGAGCGCATTCCCAATTCCGAGAGAAACGATGCCACTTCTCCTGGAACTGTTCCCGAGATTGAGAGAATGCGTGACGCTGCACATGATCTAAGCCCCACGTCCCATCCATCATTTGCTGCACAACAACAGGATGTCAGAGTTGAACGCACTGAGTCATTGGATGAAACTTTGAATGAGAAGGAACCCACTATCCCTAGTATTGATGAAGAAATGTTAAATTCTGGAAGGCATTCTGCGTTTGAGCTTCGCTCAGGATCTCCAGGTTCTGCTGCTGGTTCTGAGGAAGAACGTGCAGATTTTGTGCATCCATCACCTCAACTGGTGCTTCAGCCATCTCCTCCTCCCCAACCACAAAGAAGGGCAAGGAAGAGGAAGAACTTTGATGGTGTCACAGTATTAACCAACAAGAACATAAGTGAAAGGCTTAAGGATCCTAGTGATACTCTACGTAAGAGAAAGAAGATGCCTTCATCCAAATTAAAGTTTTGGAGAATGAATAACCAGTCAAGGAAGGATCAAAATTTCAATGAGCCCTTGTTTACTGGCTTCTCAGATGATTTACGCAATGTCTTTGAAAAGGACTATGTAGCTTCAAAGCCACATCTTGCTGTTTCTGATGAAACTTTACCAGAACCTGCATCTGTATCTCCTACTCGAGAAGCTGAAGTAGAAATTAATCCGGTCTCTCCAATTCCAGATTCTACTAATCCAGACAGTACAGTTCAGCTATCTCCAGCGCAGCAAACTGAAGATGTCCTAGACTCTGCAGGTCCTCGACCCGCGCATGCAGAGTCTGTAGCAACAGAAGCACAATCTCCTCGGACATTTGATAACGATGACATGGGAATAGAACATTTAAGGGATGGTGGTTTCCCGGTGTACATGCCGTCACCACCTCCAAGATCTTCACCTTTTAGAACCGATGACTTCACCACTCAGTCTGGAAATTGGGAGACAGAATCTTATAGAACAGAGCCTTCAACTTCCACAGTTCCAGAGGACTTGCCTGGCCAAAGAAATTTGGGGCTTTCACCTGTTTCTGAAAGGACTGACGAGGAACTTTATTTCCTGGAGGTAGGTGGCAATTCCCCAGTAGGAACACCAGCTAGTCAAGATTCTGCTGCTTTGACAGGGAGAGCAAGAGCCTTGGCTCAGTATCTTAAACAACGTTCTTCAAGTAGTCCCACCACATCAAGCCATCCTTCTGGAGATCTAAGTTTGAGCGAGATCTTGGCAGGAAAGACACGGAAGCTAGCTGCTCGAATGTTCTTCGAGACACTGGTTTTGAAGTCTAGGGGACTTATAGATATGCAACAGGACCGACCATACGGAGATATCGCTTTGAAGTTGATGCCTGCCCTTTTTTCTAAGGTTCAAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

693

Amino Acids

77.14

Weight (kDa)

4.77

Isoelectric Point (pI)

62.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 102	1.1e-34	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	635 - 687	1.1e-21	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59550 AT4G05360
fragaria_vesca	FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520
malus_domestica	MD02G1316900.v1.1 MD07G1005000.v1.1
prunus_persica	Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1
pyrus_communis	pycom07g00410
rosa_chinensis	RchiOBHm_Chr1g0314311
rosa_laevigata	RLG00000030767
rosa_multiflora	Rmu_sc0000343.1_g000013 Rmu_sc0002833.1_g000005 Rmu_sc0042953.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331970
rosa_rugosa	Rorug01G0000900 Rorug01G0000900
rosa_samantha	Rh1AG010000 Rh1BG002900 Rh1CG010300 Rh1DG005400
rosa_wichuraiana	Rw1G000450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1342, 1457
AccBSI	CCGCTC	1 cut(s)	62
AccI	GTMKAC	1 cut(s)	513
AccII	CGCG	1 cut(s)	1481
AciI	CCGC	3 cut(s)	60, 311, 1479
AclI	AACGTT	1 cut(s)	1867
AclWI	GGATC	7 cut(s)	446, 668, 681, 961, 1124, 1137, 1221
AcoI	YGGCCR	1 cut(s)	1708
AcsI	RAATTY	6 cut(s)	386, 435, 656, 916, 1219, 1717
AcuI	CTGAAG	5 cut(s)	162, 684, 1010, 1383, 1467
AfaI	GTAC	4 cut(s)	95, 147, 1417, 1580
AflII	CTTAAG	1 cut(s)	1124
AjiI	CACGTC	1 cut(s)	798
AjnI	CCWGG	5 cut(s)	669, 739, 958, 1705, 1767
AjuI	GAANNNNNNNTTGG	4 cut(s)	599, 631, 1381, 1413
AloI	GAACNNNNNNTCC	6 cut(s)	619, 651, 873, 905, 1749, 1781
AluBI	AGCT	8 cut(s)	257, 943, 1289, 1361, 1426, 1805, 1951, 1955
AluI	AGCT	8 cut(s)	257, 943, 1289, 1361, 1426, 1805, 1951, 1955
Alw21I	GWGCWC	1 cut(s)	72
Alw26I	GTCTC	6 cut(s)	93, 569, 594, 1387, 1646, 1967
Alw44I	GTGCAC	1 cut(s)	68
AlwI	GGATC	7 cut(s)	446, 668, 681, 961, 1124, 1137, 1221
AlwNI	CAGNNNCTG	4 cut(s)	530, 965, 1334, 1493
Ama87I	CYCGRG	2 cut(s)	752, 1353
AoxI	GGCC	2 cut(s)	306, 1708
ApaLI	GTGCAC	1 cut(s)	68
ApeKI	GCWGC	6 cut(s)	776, 815, 968, 1438, 1820, 1955
ApoI	RAATTY	6 cut(s)	386, 435, 656, 916, 1219, 1717
ArsI	GACNNNNNNTTYG	4 cut(s)	371, 403, 1966, 1998
AseI	ATTAAT	1 cut(s)	1374
Asp700I	GAANNNNTTC	2 cut(s)	199, 928
AspLEI	GCGC	4 cut(s)	59, 705, 1438, 1483
AspS9I	GGNCC	5 cut(s)	35, 307, 581, 1469, 2017
AsuC2I	CCSGG	1 cut(s)	1574
AsuHPI	GGTGA	6 cut(s)	164, 1002, 1581, 1599, 1621, 1722
AsuNHI	GCTAGC	1 cut(s)	1951
AvaI	CYCGRG	2 cut(s)	752, 1353
AvaII	GGWCC	4 cut(s)	35, 581, 1469, 2017
AxyI	CCTNAGG	1 cut(s)	291
BaeGI	GKGCMC	1 cut(s)	72
BalI	TGGCCA	1 cut(s)	1710
BamHI	GGATCC	2 cut(s)	673, 1129
BanII	GRGCYC	1 cut(s)	1233
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
Bbv12I	GWGCWC	1 cut(s)	72
BbvI	GCAGC	6 cut(s)	763, 802, 955, 1450, 1807, 1942
BccI	CCATC	9 cut(s)	110, 499, 810, 814, 1015, 1039, 1076, 1556, 1905
BceAI	ACGGC	2 cut(s)	582, 1570
BciT130I	CCWGG	5 cut(s)	671, 741, 960, 1707, 1769
BcnI	CCSGG	1 cut(s)	1574
BcoDI	GTCTC	6 cut(s)	93, 569, 594, 1387, 1646, 1967
BfaI	CTAG	8 cut(s)	179, 678, 894, 1134, 1457, 1806, 1952, 1992
BfmI	CTRYAG	3 cut(s)	631, 1464, 1494
BfrI	CTTAAG	1 cut(s)	1124
BfuAI	ACCTGC	2 cut(s)	1342, 1457
BglI	GCCNNNNNGGC	1 cut(s)	305
BglII	AGATCT	3 cut(s)	1601, 1909, 1926
BisI	GCNGC	7 cut(s)	60, 777, 816, 969, 1439, 1821, 1956
BlsI	GCNGC	7 cut(s)	61, 778, 817, 970, 1440, 1822, 1957
Bme1390I	CCNGG	6 cut(s)	671, 741, 960, 1574, 1707, 1769
Bme18I	GGWCC	4 cut(s)	35, 581, 1469, 2017
BmeT110I	CYCGRG	2 cut(s)	752, 1353
BmgBI	CACGTC	1 cut(s)	798
BmgT120I	GGNCC	5 cut(s)	35, 307, 581, 1469, 2017
BmiI	GGNNCC	6 cut(s)	36, 309, 628, 675, 882, 1131
BmrFI	CCNGG	6 cut(s)	671, 741, 960, 1574, 1707, 1769
BmrI	ACTGGG	1 cut(s)	1784
BmsI	GCATC	6 cut(s)	286, 718, 1012, 1152, 1346, 2040
BmtI	GCTAGC	1 cut(s)	1955
BmuI	ACTGGG	1 cut(s)	1784
BplI	GAGNNNNNCTC	2 cut(s)	932, 964
BpmI	CTGGAG	4 cut(s)	942, 1416, 1790, 1926
Bpu10I	CCTNAGC	2 cut(s)	258, 949
BpuEI	CTTGAG	3 cut(s)	65, 261, 318
BpuMI	CCSGG	1 cut(s)	1574
BsaAI	YACGTR	1 cut(s)	1148
BsaI	GGTCTC	1 cut(s)	1387
BsaJI	CCNNGG	2 cut(s)	1517, 1845
BsaWI	WCCGGW	2 cut(s)	545, 1378
Bse1I	ACTGG	8 cut(s)	236, 448, 628, 1023, 1201, 1246, 1790, 1983
Bse21I	CCTNAGG	1 cut(s)	291
Bse3DI	GCAATG	1 cut(s)	1270
BseBI	CCWGG	5 cut(s)	671, 741, 960, 1707, 1769
BseDI	CCNNGG	2 cut(s)	1517, 1845
BseMI	GCAATG	1 cut(s)	1270
BseNI	ACTGG	8 cut(s)	236, 448, 628, 1023, 1201, 1246, 1790, 1983
BseRI	GAGGAG	3 cut(s)	1026, 1029, 1506
BseSI	GKGCMC	1 cut(s)	72
BseXI	GCAGC	6 cut(s)	763, 802, 955, 1450, 1807, 1942
BsgI	GTGCAG	3 cut(s)	762, 801, 1011
Bsh1236I	CGCG	1 cut(s)	1481
BshFI	GGCC	2 cut(s)	308, 1710
BsiHKAI	GWGCWC	1 cut(s)	72
BsiHKCI	CYCGRG	2 cut(s)	752, 1353
BsiSI	CCGG	3 cut(s)	546, 1379, 1574
BslFI	GGGAC	4 cut(s)	58, 784, 1866, 2010
BsmAI	GTCTC	6 cut(s)	93, 569, 594, 1387, 1646, 1967
BsmFI	GGGAC	4 cut(s)	58, 784, 1866, 2010
BsmI	GAATGC	3 cut(s)	705, 771, 928
BsnI	GGCC	2 cut(s)	308, 1710
Bso31I	GGTCTC	1 cut(s)	1387
BsoBI	CYCGRG	2 cut(s)	752, 1353
Bsp1286I	GDGCHC	2 cut(s)	72, 1233
Bsp1407I	TGTACA	1 cut(s)	1578
BspACI	CCGC	3 cut(s)	60, 311, 1479
BspANI	GGCC	2 cut(s)	308, 1710
BspFNI	CGCG	1 cut(s)	1481
BspHI	TCATGA	1 cut(s)	571
BspLI	GGNNCC	6 cut(s)	36, 309, 628, 675, 882, 1131
BspMAI	CTGCAG	1 cut(s)	1468
BspMI	ACCTGC	2 cut(s)	1342, 1457
BspOI	GCTAGC	1 cut(s)	1955
BspPI	GGATC	7 cut(s)	446, 668, 681, 961, 1124, 1137, 1221
BspQI	GCTCTTC	1 cut(s)	693
BspTI	CTTAAG	1 cut(s)	1124
BspTNI	GGTCTC	1 cut(s)	1387
BsrBI	CCGCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	1270
BsrGI	TGTACA	1 cut(s)	1578
BsrI	ACTGG	8 cut(s)	236, 448, 628, 1023, 1201, 1246, 1790, 1983
BssECI	CCNNGG	2 cut(s)	1517, 1845
BssT1I	CCWWGG	1 cut(s)	1845
Bst2UI	CCWGG	5 cut(s)	671, 741, 960, 1707, 1769
Bst4CI	ACNGT	7 cut(s)	49, 121, 748, 1093, 1415, 1420, 1690
Bst6I	CTCTTC	2 cut(s)	693, 1061
BstAFI	CTTAAG	1 cut(s)	1124
BstAUI	TGTACA	1 cut(s)	1578
BstBAI	YACGTR	1 cut(s)	1148
BstC8I	GCNNGC	3 cut(s)	1485, 1953, 2055
BstFNI	CGCG	1 cut(s)	1481
BstHHI	GCGC	4 cut(s)	59, 705, 1438, 1483
BstMAI	GTCTC	6 cut(s)	93, 569, 594, 1387, 1646, 1967
BstMWI	GCNNNNNNNGC	2 cut(s)	305, 1505
BstNI	CCWGG	5 cut(s)	671, 741, 960, 1707, 1769
BstNSI	RCATGY	2 cut(s)	1487, 1585
BstSCI	CCNGG	6 cut(s)	669, 739, 958, 1572, 1705, 1767
BstSFI	CTRYAG	3 cut(s)	631, 1464, 1494
BstSLI	GKGCMC	1 cut(s)	72
BstSNI	TACGTA	1 cut(s)	1148
BstUI	CGCG	1 cut(s)	1481
BstV1I	GCAGC	6 cut(s)	763, 802, 955, 1450, 1807, 1942
BstX2I	RGATCY	6 cut(s)	673, 953, 1129, 1601, 1909, 1926
BstXI	CCANNNNNNTGG	1 cut(s)	1904
BstYI	RGATCY	6 cut(s)	673, 953, 1129, 1601, 1909, 1926
Bsu36I	CCTNAGG	1 cut(s)	291
BsuRI	GGCC	2 cut(s)	308, 1710
BtrI	CACGTC	1 cut(s)	798
BtsIMutI	CAGTG	4 cut(s)	117, 660, 846, 1976
BveI	ACCTGC	2 cut(s)	1342, 1457
Cac8I	GCNNGC	3 cut(s)	1485, 1953, 2055
CaiI	CAGNNNCTG	4 cut(s)	530, 965, 1334, 1493
CciI	TCATGA	1 cut(s)	571
CfoI	GCGC	4 cut(s)	59, 705, 1438, 1483
Cfr13I	GGNCC	5 cut(s)	35, 307, 581, 1469, 2017
CseI	GACGC	1 cut(s)	782
Csp6I	GTAC	4 cut(s)	94, 146, 1416, 1579
CspCI	CAANNNNNGTGG	2 cut(s)	192, 227
CviAII	CATG	7 cut(s)	65, 382, 572, 782, 1484, 1540, 1582
CviQI	GTAC	4 cut(s)	94, 146, 1416, 1579
EaeI	YGGCCR	1 cut(s)	1708
Eam1104I	CTCTTC	2 cut(s)	693, 1061
EarI	CTCTTC	2 cut(s)	693, 1061
Eco105I	TACGTA	1 cut(s)	1148
Eco130I	CCWWGG	1 cut(s)	1845
Eco24I	GRGCYC	1 cut(s)	1233
Eco31I	GGTCTC	1 cut(s)	1387
Eco32I	GATATC	2 cut(s)	418, 2035
Eco47I	GGWCC	4 cut(s)	35, 581, 1469, 2017
Eco57I	CTGAAG	5 cut(s)	162, 684, 1010, 1383, 1467
Eco81I	CCTNAGG	1 cut(s)	291
Eco88I	CYCGRG	2 cut(s)	752, 1353
EcoO109I	RGGNCCY	2 cut(s)	307, 1469
EcoRI	GAATTC	2 cut(s)	386, 656
EcoRII	CCWGG	5 cut(s)	669, 739, 958, 1705, 1767
EcoRV	GATATC	2 cut(s)	418, 2035
EcoT14I	CCWWGG	1 cut(s)	1845
EcoT38I	GRGCYC	1 cut(s)	1233
ErhI	CCWWGG	1 cut(s)	1845
FaeI	CATG	7 cut(s)	68, 385, 575, 785, 1487, 1543, 1585
FalI	AAGNNNNNCTT	2 cut(s)	1885, 1917
FaqI	GGGAC	4 cut(s)	58, 784, 1866, 2010
FatI	CATG	7 cut(s)	64, 381, 571, 781, 1483, 1539, 1581
FauI	CCCGC	2 cut(s)	318, 1486
FblI	GTMKAC	1 cut(s)	513
Fnu4HI	GCNGC	7 cut(s)	60, 777, 816, 969, 1439, 1821, 1956
FriOI	GRGCYC	1 cut(s)	1233
Fsp4HI	GCNGC	7 cut(s)	60, 777, 816, 969, 1439, 1821, 1956
FspBI	CTAG	8 cut(s)	179, 678, 894, 1134, 1457, 1806, 1952, 1992
GlaI	GCGC	4 cut(s)	58, 704, 1437, 1482
GluI	GCNGC	7 cut(s)	60, 777, 816, 969, 1439, 1821, 1956
GsuI	CTGGAG	4 cut(s)	942, 1416, 1790, 1926
HaeIII	GGCC	2 cut(s)	308, 1710
HapII	CCGG	3 cut(s)	546, 1379, 1574
HgaI	GACGC	1 cut(s)	782
HhaI	GCGC	4 cut(s)	59, 705, 1438, 1483
Hin1II	CATG	7 cut(s)	68, 385, 575, 785, 1487, 1543, 1585
Hin6I	GCGC	4 cut(s)	57, 703, 1436, 1481
HinP1I	GCGC	4 cut(s)	57, 703, 1436, 1481
HincII	GTYRAC	2 cut(s)	283, 514
HindII	GTYRAC	2 cut(s)	283, 514
HpaI	GTTAAC	1 cut(s)	283
HpaII	CCGG	3 cut(s)	546, 1379, 1574
HphI	GGTGA	6 cut(s)	164, 1002, 1581, 1599, 1621, 1722
Hpy166II	GTNNAC	6 cut(s)	70, 96, 283, 514, 1239, 1579
Hpy188I	TCNGA	9 cut(s)	405, 493, 718, 836, 979, 1252, 1315, 1521, 1741
Hpy8I	GTNNAC	6 cut(s)	70, 96, 283, 514, 1239, 1579
Hpy99I	CGWCG	1 cut(s)	479
HpyAV	CCTTC	8 cut(s)	185, 871, 918, 1050, 1176, 1204, 1686, 1911
HpyCH4III	ACNGT	7 cut(s)	49, 121, 748, 1093, 1415, 1420, 1690
HpyCH4IV	ACGT	7 cut(s)	164, 645, 797, 988, 1147, 1867, 2078
HpyCH4V	TGCA	9 cut(s)	70, 779, 818, 992, 1003, 1337, 1466, 1487, 2011
HpyF10VI	GCNNNNNNNGC	2 cut(s)	305, 1505
HpySE526I	ACGT	7 cut(s)	164, 645, 797, 988, 1147, 1867, 2078
Hsp92II	CATG	7 cut(s)	68, 385, 575, 785, 1487, 1543, 1585
HspAI	GCGC	4 cut(s)	57, 703, 1436, 1481
KspAI	GTTAAC	1 cut(s)	283
LguI	GCTCTTC	1 cut(s)	693
Lsp1109I	GCAGC	6 cut(s)	763, 802, 955, 1450, 1807, 1942
LweI	GCATC	6 cut(s)	286, 718, 1012, 1152, 1346, 2040
MaeI	CTAG	8 cut(s)	179, 678, 894, 1134, 1457, 1806, 1952, 1992
MaeII	ACGT	7 cut(s)	164, 645, 797, 988, 1147, 1867, 2078
MaeIII	GTNAC	9 cut(s)	170, 322, 466, 641, 646, 686, 770, 1087, 1587
MbiI	CCGCTC	1 cut(s)	62
MflI	RGATCY	6 cut(s)	673, 953, 1129, 1601, 1909, 1926
MhlI	GDGCHC	2 cut(s)	72, 1233
MlsI	TGGCCA	1 cut(s)	1710
MluNI	TGGCCA	1 cut(s)	1710
MlyI	GAGTC	5 cut(s)	326, 596, 860, 1454, 1499
Mox20I	TGGCCA	1 cut(s)	1710
MroXI	GAANNNNTTC	2 cut(s)	199, 928
MscI	TGGCCA	1 cut(s)	1710
MseI	TTAA	9 cut(s)	243, 282, 914, 1097, 1125, 1178, 1374, 1556, 1860
Msp20I	TGGCCA	1 cut(s)	1710
MspCI	CTTAAG	1 cut(s)	1124
MspI	CCGG	3 cut(s)	546, 1379, 1574
MspR9I	CCNGG	6 cut(s)	671, 741, 960, 1574, 1707, 1769
Mva1269I	GAATGC	3 cut(s)	705, 771, 928
MvaI	CCWGG	5 cut(s)	671, 741, 960, 1707, 1769
MvnI	CGCG	1 cut(s)	1481
MwoI	GCNNNNNNNGC	2 cut(s)	305, 1505
NciI	CCSGG	1 cut(s)	1574
NheI	GCTAGC	1 cut(s)	1951
NlaIII	CATG	7 cut(s)	68, 385, 575, 785, 1487, 1543, 1585
NlaIV	GGNNCC	6 cut(s)	36, 309, 628, 675, 882, 1131
NmuCI	GTSAC	5 cut(s)	170, 646, 770, 1087, 1587
NspI	RCATGY	2 cut(s)	1487, 1585
PaeI	GCATGC	1 cut(s)	1487
PaeR7I	CTCGAG	1 cut(s)	1353
PagI	TCATGA	1 cut(s)	571
PciSI	GCTCTTC	1 cut(s)	693
PctI	GAATGC	3 cut(s)	705, 771, 928
PdmI	GAANNNNTTC	2 cut(s)	199, 928
PfeI	GAWTC	5 cut(s)	235, 494, 1397, 1658, 1814
PfoI	TCCNGGA	3 cut(s)	669, 739, 1767
PkrI	GCNGC	7 cut(s)	61, 778, 817, 970, 1440, 1822, 1957
PleI	GAGTC	5 cut(s)	325, 596, 859, 1454, 1498
PpsI	GAGTC	5 cut(s)	325, 596, 859, 1454, 1498
Ppu21I	YACGTR	1 cut(s)	1148
PpuMI	RGGWCCY	1 cut(s)	1469
PshBI	ATTAAT	1 cut(s)	1374
Psp1406I	AACGTT	1 cut(s)	1867
Psp5II	RGGWCCY	1 cut(s)	1469
Psp6I	CCWGG	5 cut(s)	669, 739, 958, 1705, 1767
PspGI	CCWGG	5 cut(s)	669, 739, 958, 1705, 1767
PspN4I	GGNNCC	6 cut(s)	36, 309, 628, 675, 882, 1131
PspPI	GGNCC	5 cut(s)	35, 307, 581, 1469, 2017
PspPPI	RGGWCCY	1 cut(s)	1469
PstI	CTGCAG	1 cut(s)	1468
PstNI	CAGNNNCTG	4 cut(s)	530, 965, 1334, 1493
PsuI	RGATCY	6 cut(s)	673, 953, 1129, 1601, 1909, 1926
RsaI	GTAC	4 cut(s)	95, 147, 1417, 1580
RsaNI	GTAC	4 cut(s)	94, 146, 1416, 1579
SalI	GTCGAC	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	693
SaqAI	TTAA	9 cut(s)	243, 282, 914, 1097, 1125, 1178, 1374, 1556, 1860
SatI	GCNGC	7 cut(s)	60, 777, 816, 969, 1439, 1821, 1956
Sau96I	GGNCC	5 cut(s)	35, 307, 581, 1469, 2017
SchI	GAGTC	5 cut(s)	326, 596, 860, 1454, 1499
ScrFI	CCNGG	6 cut(s)	671, 741, 960, 1574, 1707, 1769
SduI	GDGCHC	2 cut(s)	72, 1233
SfaNI	GCATC	6 cut(s)	286, 718, 1012, 1152, 1346, 2040
SfcI	CTRYAG	3 cut(s)	631, 1464, 1494
Sfr274I	CTCGAG	1 cut(s)	1353
SinI	GGWCC	4 cut(s)	35, 581, 1469, 2017
SlaI	CTCGAG	1 cut(s)	1353
SmlI	CTYRAG	5 cut(s)	80, 276, 333, 1124, 1353
SmoI	CTYRAG	5 cut(s)	80, 276, 333, 1124, 1353
SnaBI	TACGTA	1 cut(s)	1148
SphI	GCATGC	1 cut(s)	1487
SsiI	CCGC	3 cut(s)	60, 311, 1479
SspI	AATATT	1 cut(s)	610
SspMI	CTAG	8 cut(s)	179, 678, 894, 1134, 1457, 1806, 1952, 1992
StyD4I	CCNGG	6 cut(s)	669, 739, 958, 1572, 1705, 1767
StyI	CCWWGG	1 cut(s)	1845
TaaI	ACNGT	7 cut(s)	49, 121, 748, 1093, 1415, 1420, 1690
TaiI	ACGT	7 cut(s)	167, 648, 800, 991, 1150, 1870, 2081
TaqII	GACCGA	1 cut(s)	2034
TatI	WGTACW	3 cut(s)	93, 1415, 1578
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	5 cut(s)	235, 494, 1397, 1658, 1814
Tru1I	TTAA	9 cut(s)	243, 282, 914, 1097, 1125, 1178, 1374, 1556, 1860
Tru9I	TTAA	9 cut(s)	243, 282, 914, 1097, 1125, 1178, 1374, 1556, 1860
TscAI	CASTG	4 cut(s)	124, 667, 853, 1983
TseFI	GTSAC	5 cut(s)	170, 646, 770, 1087, 1587
TseI	GCWGC	6 cut(s)	776, 815, 968, 1438, 1820, 1955
Tsp45I	GTSAC	5 cut(s)	170, 646, 770, 1087, 1587
TspDTI	ATGAA	5 cut(s)	876, 918, 1158, 1208, 1332
TspGWI	ACGGA	2 cut(s)	1960, 2043
TspRI	CASTG	4 cut(s)	124, 667, 853, 1983
Vha464I	CTTAAG	1 cut(s)	1124
VneI	GTGCAC	1 cut(s)	68
VpaK11BI	GGWCC	4 cut(s)	35, 581, 1469, 2017
VspI	ATTAAT	1 cut(s)	1374
XapI	RAATTY	6 cut(s)	386, 435, 656, 916, 1219, 1717
XceI	RCATGY	2 cut(s)	1487, 1585
XhoI	CTCGAG	1 cut(s)	1353
XmiI	GTMKAC	1 cut(s)	513
XmnI	GAANNNNTTC	2 cut(s)	199, 928
XspI	CTAG	8 cut(s)	179, 678, 894, 1134, 1457, 1806, 1952, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.