Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0005290

Physical Location & Seq

Genomic Coordinates Forward (+)

65943529 .. 65949934

Gene Structure 6406 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00331970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGTTCTACTCGCACACAATCTTGGCTCGGAAGGGCCCATTGGGAACCGTATGGTGCGCTGCCCATCTGCAGCACAGACTCAAGAAGTCCCATTACGCCGCCACCGACATCCCCTCCACCGTCGATCGCATCATGTTTCCCGAGGTTCCTATTGCACTCAGAATGTCAGGGCACCTTCTACTAGGGGTTGTTCGGATTTACTCAAAGAAAGTCGAGTATCTTCACCAGGACTGTAACGTTGTATTGAATGGCCTCAAAAAGGCCTTTGCTTCTATAGACTTGAGCTTGCCAGAGAACGCAATGCAAGCACCGCTTCAGTCTATCACTTTGCCTGAAACATTATGCCTTGATGCTTTGGATTGCGGTCCCGACTTGAATGATGACGGGGCTCACAATGACCATCTAGGGAACCAGGAGGATATCACGCTAACAGAACAATTTCCCATTGCAACAAACCCTTATGTTGCTATAACTTTTGACGAGGATATCAGGATGGAGGATCTATCGCATCAAACAGAGGATTTTGGTTCACATGTTACCCCTATGGATGTGGACACCATCCCCCCACATCTGGAACAGGGTACTCATAGTCCGGTCAATCTGACAGATGAACGAACAACACATAATGATGAGGTAAACCTTCAAGGTTCTCAAGGAATTTCTGGTGTTCCTAGTCCGACAGACGAACAACGGAGGCCTAGCGATGATTTTACCCTTCCAGACTGTCCAGAAAAGGAGACTCAGAAGGATTTTGGATGTCAAGATCCTGGACCAAGTCAGCCTACAGAAATTCTTAATTTGAGTCATAGAGACTACAGTTCCCCCGAAAATGTTCCAGAAATAGAAGCTCAACGCAATGCAGTTTCTGATATTAGCTCAGAAACCTTTCCATTTTCTTCCAGTCATAGGAATGATGTTACTGAACAACATGACCCACCAACAAATGAGAAAGCCATTCTTTCTCCAATTATGGAGGGAAGTATACATTCTGTTGGGCCATCTCCAGCGGTCCAGCCAAGTTCAGAAACACCAGCATCTGTTGCTTCTTTGTCAGAGGGCCGACAGAATATTAATACATCTGTTTCAGTTGCAATCCAATCAACACCTCGTATTGAACAGCCACCTCTTGAACAGCCACTTATTGAGCAGCCAAGACCAAGGAAAAGAAAAAAGCAGTACTTTGATGATCCTGTTGTATTATCTAATAAGTTTATTGGGAAGAGACTTAAAGATGCCAGTGATATAATCCGCAAAAGGAAGAAACTTCCGTCCTCTGCATTGGGTATTTGGAAGTTGAAAAACGTTTTAAGAAAGGAACAAGTGTTCCTTCAGCCTTCATTAACCGGGTTGTGCTCTGATCTTAGTAACATTTACGACAAAACATACATATCTACAAAATCCCATTTGTTTGAGGAAGCTCTTCCAGACCCTAGGCCAACGTCTCCTTCTCCCACAACTGAAGTGGTCTCAGAAGATGGGGCTGCAGTGTCTCCTCTTCCTCCTTTCTCTCCTCTTACAATTGATGTCTCCCCAGAGCACGGAGTTGGAGACTCTGTCCCTGCCAATGAATCTTCCCCAGTGAAGGGTCTACAATCCCTTTCTTCTCCTGCAACTGAGTGTGACCAAGACGCTGAACAATTTAGAGGTGTCGAACATGATGGGGTTTTACCCGATTCACCTACAATCAAGCGTTCTCTGATGATAGATGACTTTACTCCTGCCCCATCACCAAAAGTGGGATCAGCTTCAGTTCATTCATTGGAAATAAATACCGGAACTCAAATACTGCAGACACCAGATTTACAAGTGTCAGCTGGATCTGAATTTGGAACACCGACAATGTTAGGAGAGGGGGTACATCCTGATTACACTGTTCCTTCACATAACCCTGAGTCAATGACTGCAGAAGCAGAAGATCTTTGGTTTCTGGAAGCAGATGATCGTACACCAGCTGGTTCTCAAGGGACAGAAGGAGTTGATTCATTGTCGGTCAGAACCAGGGCTGTAGCTCAATATTTGAAAAGCCAATCTCCAGAAGACCTATCCAGTGATCTCAGCTTGAACAAAATTTTAGAAGGAAAAAGAAGAAAGCTATGTGCTCGAATGTTCTTTGAAACACTGGTCTTGAAGAGTTATGATCTTATTGATGTAAAACAAGAAGTCCCTTATGGTGACATTAGTTTGAAGTTGACTCAAACCCTCTCAAAGGCTCAAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

739

Amino Acids

80.99

Weight (kDa)

4.91

Isoelectric Point (pI)

61.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 100	5.2e-37	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	684 - 731	5.1e-18	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59550 AT4G05360
fragaria_vesca	FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520
malus_domestica	MD02G1316900.v1.1 MD07G1005000.v1.1
prunus_persica	Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1
pyrus_communis	pycom07g00410
rosa_chinensis	RchiOBHm_Chr1g0314311
rosa_laevigata	RLG00000030767
rosa_multiflora	Rmu_sc0000343.1_g000013 Rmu_sc0002833.1_g000005 Rmu_sc0042953.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331970
rosa_rugosa	Rorug01G0000900 Rorug01G0000900
rosa_samantha	Rh1AG010000 Rh1BG002900 Rh1CG010300 Rh1DG005400
rosa_wichuraiana	Rw1G000450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	171
AccI	GTMKAC	2 cut(s)	982, 1588
AciI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
AclI	AACGTT	2 cut(s)	237, 1302
AclWI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
AcsI	RAATTY	4 cut(s)	657, 789, 1823, 2067
AcuI	CTGAAG	4 cut(s)	299, 1313, 1479, 1731
AfaI	GTAC	4 cut(s)	583, 1178, 1857, 1945
AfiI	CCNNNNNNNGG	8 cut(s)	259, 571, 906, 1538, 1582, 1583, 1736, 2206
AflIII	ACRYGT	1 cut(s)	532
AjnI	CCWGG	4 cut(s)	225, 411, 766, 1997
AjuI	GAANNNNNNNTTGG	4 cut(s)	23, 55, 1429, 1461
AloI	GAACNNNNNNTCC	4 cut(s)	1307, 1308, 1339, 1340
Alw21I	GWGCWC	3 cut(s)	1355, 1539, 2101
Alw26I	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
AlwI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
AlwNI	CAGNNNCTG	2 cut(s)	866, 1037
Ama87I	CYCGRG	1 cut(s)	140
AoxI	GGCC	7 cut(s)	34, 250, 261, 695, 995, 1057, 1433
ApaI	GGGCCC	1 cut(s)	38
ApeKI	GCWGC	4 cut(s)	59, 70, 1147, 1481
ApoI	RAATTY	4 cut(s)	657, 789, 1823, 2067
AseI	ATTAAT	1 cut(s)	1071
Asp700I	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
AspA2I	CCTAGG	1 cut(s)	1430
AspLEI	GCGC	1 cut(s)	59
AspS9I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
AsuC2I	CCSGG	1 cut(s)	1345
AsuHPI	GGTGA	4 cut(s)	215, 1668, 1719, 2183
AvaI	CYCGRG	1 cut(s)	140
AvaII	GGWCC	3 cut(s)	365, 770, 1009
AvrII	CCTAGG	1 cut(s)	1430
BaeGI	GKGCMC	2 cut(s)	38, 174
BanI	GGYRCC	1 cut(s)	171
BanII	GRGCYC	2 cut(s)	38, 391
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
BbsI	GAAGAC	1 cut(s)	2043
Bbv12I	GWGCWC	3 cut(s)	1355, 1539, 2101
BbvI	GCAGC	4 cut(s)	46, 82, 1159, 1468
BccI	CCATC	8 cut(s)	72, 408, 487, 566, 1006, 1469, 1652, 1732
BciT130I	CCWGG	4 cut(s)	227, 413, 768, 1999
BcnI	CCSGG	1 cut(s)	1345
BcoDI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BfaI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
BfmI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1902, 2004
BglII	AGATCT	1 cut(s)	1915
BisI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
BlnI	CCTAGG	1 cut(s)	1430
BlsI	GCNGC	5 cut(s)	61, 72, 100, 1149, 1483
BmcAI	AGTACT	1 cut(s)	1178
Bme1390I	CCNGG	5 cut(s)	227, 413, 768, 1345, 1999
Bme18I	GGWCC	3 cut(s)	365, 770, 1009
BmeT110I	CYCGRG	1 cut(s)	140
BmgT120I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
BmiI	GGNNCC	6 cut(s)	36, 46, 147, 173, 367, 410
BmrFI	CCNGG	5 cut(s)	227, 413, 768, 1345, 1999
BmrI	ACTGGG	1 cut(s)	1571
BmsI	GCATC	5 cut(s)	138, 340, 517, 1043, 1222
BmuI	ACTGGG	1 cut(s)	1571
BpiI	GAAGAC	1 cut(s)	2043
BpmI	CTGGAG	2 cut(s)	987, 2016
BpuEI	CTTGAG	4 cut(s)	65, 301, 636, 1944
BpuMI	CCSGG	1 cut(s)	1345
BsaI	GGTCTC	1 cut(s)	1471
BsaJI	CCNNGG	4 cut(s)	141, 1157, 1430, 1998
BsaWI	WCCGGW	2 cut(s)	592, 1772
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 1539, 1569, 1839, 1869
Bsc4I	CCNNNNNNNGG	8 cut(s)	259, 571, 906, 1538, 1582, 1583, 1736, 2206
Bse1I	ACTGG	5 cut(s)	900, 1236, 1577, 2046, 2124
Bse3DI	GCAATG	3 cut(s)	306, 444, 862
BseBI	CCWGG	4 cut(s)	227, 413, 768, 1999
BseDI	CCNNGG	4 cut(s)	141, 1157, 1430, 1998
BseGI	GGATG	6 cut(s)	108, 498, 553, 558, 761, 1858
BseLI	CCNNNNNNNGG	8 cut(s)	259, 571, 906, 1538, 1582, 1583, 1736, 2206
BseMI	GCAATG	3 cut(s)	306, 444, 862
BseMII	CTCAG	7 cut(s)	172, 755, 891, 1482, 1605, 1881, 2068
BseNI	ACTGG	5 cut(s)	900, 1236, 1577, 2046, 2124
BseRI	GAGGAG	2 cut(s)	1482, 1500
BseSI	GKGCMC	2 cut(s)	38, 174
BseXI	GCAGC	4 cut(s)	46, 82, 1159, 1468
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	7 cut(s)	36, 252, 263, 697, 997, 1059, 1435
BshNI	GGYRCC	1 cut(s)	171
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	3 cut(s)	1355, 1539, 2101
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	3 cut(s)	593, 1344, 1773
BslFI	GGGAC	5 cut(s)	73, 351, 1541, 1978, 2147
BslI	CCNNNNNNNGG	8 cut(s)	259, 571, 906, 1538, 1582, 1583, 1736, 2206
BsmAI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BsmBI	CGTCTC	1 cut(s)	1446
BsmFI	GGGAC	5 cut(s)	73, 351, 1541, 1978, 2147
BsnI	GGCC	7 cut(s)	36, 252, 263, 697, 997, 1059, 1435
Bso31I	GGTCTC	1 cut(s)	1471
BsoBI	CYCGRG	1 cut(s)	140
Bsp120I	GGGCCC	1 cut(s)	34
Bsp1286I	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2101
BspACI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
BspANI	GGCC	7 cut(s)	36, 252, 263, 697, 997, 1059, 1435
BspCNI	CTCAG	7 cut(s)	171, 754, 890, 1481, 1606, 1882, 2067
BspLI	GGNNCC	6 cut(s)	36, 46, 147, 173, 367, 410
BspMAI	CTGCAG	4 cut(s)	72, 1486, 1791, 1906
BspPI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
BspQI	GCTCTTC	1 cut(s)	1425
BspT107I	GGYRCC	1 cut(s)	171
BspTNI	GGTCTC	1 cut(s)	1471
BsrDI	GCAATG	3 cut(s)	306, 444, 862
BsrI	ACTGG	5 cut(s)	900, 1236, 1577, 2046, 2124
BssECI	CCNNGG	4 cut(s)	141, 1157, 1430, 1998
BssNAI	GTATAC	1 cut(s)	983
BssT1I	CCWWGG	2 cut(s)	1157, 1430
Bst1107I	GTATAC	1 cut(s)	983
Bst2UI	CCWGG	4 cut(s)	227, 413, 768, 1999
Bst4CI	ACNGT	6 cut(s)	49, 121, 233, 725, 818, 1873
Bst6I	CTCTTC	4 cut(s)	1214, 1425, 1500, 2123
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstC8I	GCNNGC	2 cut(s)	287, 306
BstDEI	CTNAG	8 cut(s)	158, 741, 877, 1361, 1468, 1614, 1890, 2054
BstENI	CCTNNNNNAGG	2 cut(s)	257, 2204
BstF5I	GGATG	6 cut(s)	108, 498, 553, 558, 761, 1858
BstHHI	GCGC	1 cut(s)	59
BstMAI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
BstNI	CCWGG	4 cut(s)	227, 413, 768, 1999
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	5 cut(s)	225, 411, 766, 1343, 1997
BstSFI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1902, 2004
BstSLI	GKGCMC	2 cut(s)	38, 174
BstV1I	GCAGC	4 cut(s)	46, 82, 1159, 1468
BstV2I	GAAGAC	1 cut(s)	2043
BstX2I	RGATCY	4 cut(s)	499, 763, 1817, 1915
BstYI	RGATCY	4 cut(s)	499, 763, 1817, 1915
BstZ17I	GTATAC	1 cut(s)	983
BsuRI	GGCC	7 cut(s)	36, 252, 263, 697, 997, 1059, 1435
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	6 cut(s)	108, 498, 553, 558, 761, 1858
BtsI	GCAGTG	1 cut(s)	1491
BtsIMutI	CAGTG	6 cut(s)	1243, 1491, 1584, 1869, 2053, 2117
Cac8I	GCNNGC	2 cut(s)	287, 306
CaiI	CAGNNNCTG	2 cut(s)	866, 1037
CfoI	GCGC	1 cut(s)	59
Cfr13I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
CseI	GACGC	1 cut(s)	1637
Csp6I	GTAC	4 cut(s)	582, 1177, 1856, 1944
CspCI	CAANNNNNGTGG	2 cut(s)	1443, 1478
CviAII	CATG	4 cut(s)	133, 533, 929, 1655
CviQI	GTAC	4 cut(s)	582, 1177, 1856, 1944
DdeI	CTNAG	8 cut(s)	158, 741, 877, 1361, 1468, 1614, 1890, 2054
Eam1104I	CTCTTC	4 cut(s)	1214, 1425, 1500, 2123
EarI	CTCTTC	4 cut(s)	1214, 1425, 1500, 2123
Eco130I	CCWWGG	2 cut(s)	1157, 1430
Eco147I	AGGCCT	2 cut(s)	263, 697
Eco24I	GRGCYC	2 cut(s)	38, 391
Eco31I	GGTCTC	1 cut(s)	1471
Eco32I	GATATC	2 cut(s)	421, 487
Eco47I	GGWCC	3 cut(s)	365, 770, 1009
Eco57I	CTGAAG	4 cut(s)	299, 1313, 1479, 1731
Eco88I	CYCGRG	1 cut(s)	140
EcoNI	CCTNNNNNAGG	2 cut(s)	257, 2204
EcoO109I	RGGNCCY	1 cut(s)	34
EcoRII	CCWGG	4 cut(s)	225, 411, 766, 1997
EcoRV	GATATC	2 cut(s)	421, 487
EcoT14I	CCWWGG	2 cut(s)	1157, 1430
EcoT38I	GRGCYC	2 cut(s)	38, 391
ErhI	CCWWGG	2 cut(s)	1157, 1430
Esp3I	CGTCTC	1 cut(s)	1446
FaeI	CATG	4 cut(s)	136, 536, 932, 1658
FalI	AAGNNNNNCTT	8 cut(s)	297, 329, 942, 974, 1163, 1195, 1311, 1343
FaqI	GGGAC	5 cut(s)	73, 351, 1541, 1978, 2147
FatI	CATG	4 cut(s)	132, 532, 928, 1654
FblI	GTMKAC	2 cut(s)	982, 1588
Fnu4HI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
FokI	GGATG	6 cut(s)	95, 505, 545, 560, 768, 1845
FriOI	GRGCYC	2 cut(s)	38, 391
Fsp4HI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
FspBI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
GlaI	GCGC	1 cut(s)	58
GluI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
GsuI	CTGGAG	2 cut(s)	987, 2016
HaeIII	GGCC	7 cut(s)	36, 252, 263, 697, 997, 1059, 1435
HapII	CCGG	3 cut(s)	593, 1344, 1773
HgaI	GACGC	1 cut(s)	1637
HhaI	GCGC	1 cut(s)	59
Hin1II	CATG	4 cut(s)	136, 536, 932, 1658
Hin6I	GCGC	1 cut(s)	57
HinP1I	GCGC	1 cut(s)	57
HincII	GTYRAC	1 cut(s)	2190
HindII	GTYRAC	1 cut(s)	2190
HinfI	GANTC	9 cut(s)	78, 739, 802, 1550, 1568, 1673, 1892, 1979, 2191
HpaII	CCGG	3 cut(s)	593, 1344, 1773
HphI	GGTGA	4 cut(s)	215, 1668, 1719, 2183
Hpy166II	GTNNAC	7 cut(s)	530, 553, 637, 983, 1589, 1946, 2190
Hpy8I	GTNNAC	7 cut(s)	530, 553, 637, 983, 1589, 1946, 2190
Hpy99I	CGWCG	1 cut(s)	125
HpyCH4III	ACNGT	6 cut(s)	49, 121, 233, 725, 818, 1873
HpyCH4IV	ACGT	3 cut(s)	237, 1302, 1439
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
HpyF3I	CTNAG	8 cut(s)	158, 741, 877, 1361, 1468, 1614, 1890, 2054
HpySE526I	ACGT	3 cut(s)	237, 1302, 1439
Hsp92II	CATG	4 cut(s)	136, 536, 932, 1658
HspAI	GCGC	1 cut(s)	57
LguI	GCTCTTC	1 cut(s)	1425
Lsp1109I	GCAGC	4 cut(s)	46, 82, 1159, 1468
LweI	GCATC	5 cut(s)	138, 340, 517, 1043, 1222
MaeI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
MaeII	ACGT	3 cut(s)	237, 1302, 1439
MaeIII	GTNAC	6 cut(s)	233, 535, 916, 1364, 1619, 2171
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	4 cut(s)	499, 763, 1817, 1915
MhlI	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2101
MluCI	AATT	9 cut(s)	437, 657, 789, 796, 966, 1518, 1637, 1823, 2067
MlyI	GAGTC	6 cut(s)	72, 733, 811, 1544, 1901, 2185
MmeI	TCCRAC	2 cut(s)	701, 1525
MroXI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
MseI	TTAA	5 cut(s)	795, 1071, 1227, 1307, 1340
MslI	CAYNNNNRTG	2 cut(s)	627, 909
MspA1I	CMGCKG	3 cut(s)	1007, 1814, 1952
MspI	CCGG	3 cut(s)	593, 1344, 1773
MspR9I	CCNGG	5 cut(s)	227, 413, 768, 1345, 1999
MunI	CAATTG	1 cut(s)	1518
MvaI	CCWGG	4 cut(s)	227, 413, 768, 1999
MwoI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
NciI	CCSGG	1 cut(s)	1345
NlaIII	CATG	4 cut(s)	136, 536, 932, 1658
NlaIV	GGNNCC	6 cut(s)	36, 46, 147, 173, 367, 410
NmuCI	GTSAC	2 cut(s)	1619, 2171
NspI	RCATGY	1 cut(s)	536
PceI	AGGCCT	2 cut(s)	263, 697
PciI	ACATGT	1 cut(s)	532
PciSI	GCTCTTC	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdmI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
PfeI	GAWTC	3 cut(s)	1568, 1673, 1979
PflFI	GACNNNGTC	2 cut(s)	774, 1553
PfoI	TCCNGGA	1 cut(s)	766
PkrI	GCNGC	5 cut(s)	61, 72, 100, 1149, 1483
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	6 cut(s)	72, 733, 810, 1544, 1900, 2185
PpsI	GAGTC	6 cut(s)	72, 733, 810, 1544, 1900, 2185
PscI	ACATGT	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1071
Psp1406I	AACGTT	2 cut(s)	237, 1302
Psp6I	CCWGG	4 cut(s)	225, 411, 766, 1997
PspGI	CCWGG	4 cut(s)	225, 411, 766, 1997
PspN4I	GGNNCC	6 cut(s)	36, 46, 147, 173, 367, 410
PspOMI	GGGCCC	1 cut(s)	34
PspPI	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
PstI	CTGCAG	4 cut(s)	72, 1486, 1791, 1906
PstNI	CAGNNNCTG	2 cut(s)	866, 1037
PsuI	RGATCY	4 cut(s)	499, 763, 1817, 1915
PsyI	GACNNNGTC	2 cut(s)	774, 1553
PvuI	CGATCG	1 cut(s)	127
PvuII	CAGCTG	2 cut(s)	1814, 1952
RsaI	GTAC	4 cut(s)	583, 1178, 1857, 1945
RsaNI	GTAC	4 cut(s)	582, 1177, 1856, 1944
RseI	CAYNNNNRTG	2 cut(s)	627, 909
SapI	GCTCTTC	1 cut(s)	1425
SaqAI	TTAA	5 cut(s)	795, 1071, 1227, 1307, 1340
SatI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
Sau96I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
ScaI	AGTACT	1 cut(s)	1178
SchI	GAGTC	6 cut(s)	72, 733, 811, 1544, 1901, 2185
ScrFI	CCNGG	5 cut(s)	227, 413, 768, 1345, 1999
SduI	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2101
SfaNI	GCATC	5 cut(s)	138, 340, 517, 1043, 1222
SfcI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1902, 2004
SinI	GGWCC	3 cut(s)	365, 770, 1009
SmiMI	CAYNNNNRTG	2 cut(s)	627, 909
SmlI	CTYRAG	4 cut(s)	80, 280, 651, 1959
SmoI	CTYRAG	4 cut(s)	80, 280, 651, 1959
Sse9I	AATT	9 cut(s)	437, 657, 789, 796, 966, 1518, 1637, 1823, 2067
SseBI	AGGCCT	2 cut(s)	263, 697
SsiI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
SspI	AATATT	2 cut(s)	1069, 2015
SspMI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
StuI	AGGCCT	2 cut(s)	263, 697
StyD4I	CCNGG	5 cut(s)	225, 411, 766, 1343, 1997
StyI	CCWWGG	2 cut(s)	1157, 1430
TaaI	ACNGT	6 cut(s)	49, 121, 233, 725, 818, 1873
TaiI	ACGT	3 cut(s)	240, 1305, 1442
TaqI	TCGA	4 cut(s)	123, 213, 1650, 2101
TaqII	GACCGA	1 cut(s)	1978
TasI	AATT	9 cut(s)	437, 657, 789, 796, 966, 1518, 1637, 1823, 2067
TatI	WGTACW	1 cut(s)	1176
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	3 cut(s)	1568, 1673, 1979
Tru1I	TTAA	5 cut(s)	795, 1071, 1227, 1307, 1340
Tru9I	TTAA	5 cut(s)	795, 1071, 1227, 1307, 1340
TscAI	CASTG	6 cut(s)	1243, 1491, 1584, 1876, 2053, 2124
TseFI	GTSAC	2 cut(s)	1619, 2171
TseI	GCWGC	4 cut(s)	59, 70, 1147, 1481
Tsp45I	GTSAC	2 cut(s)	1619, 2171
TspDTI	ATGAA	6 cut(s)	624, 1326, 1581, 1742, 1746, 1971
TspGWI	ACGGA	3 cut(s)	706, 1257, 1554
TspRI	CASTG	6 cut(s)	1243, 1491, 1584, 1876, 2053, 2124
Tth111I	GACNNNGTC	2 cut(s)	774, 1553
VpaK11BI	GGWCC	3 cut(s)	365, 770, 1009
VspI	ATTAAT	1 cut(s)	1071
XagI	CCTNNNNNAGG	2 cut(s)	257, 2204
XapI	RAATTY	4 cut(s)	657, 789, 1823, 2067
XceI	RCATGY	1 cut(s)	536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmaJI	CCTAGG	1 cut(s)	1430
XmiI	GTMKAC	2 cut(s)	982, 1588
XmnI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
XspI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
ZrmI	AGTACT	1 cut(s)	1178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.