Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000343.1

Orthogroup ID

OG0005290

Physical Location & Seq

Genomic Coordinates Forward (+)

29452 .. 34151

Gene Structure 4700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000343.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

atgttctactcgcacacaatcttggctcggaagggcccattgggaaccgtatggtgcgctgcccatctgcagcacagactcaagaagtcccattacgccgccaccgacatcccctccaccgtcgatcgcatcatgtttcccgaggttcctattgcactcagaatgtcggggcaccttctactaggggttgttcggatttactcaaagaaagtcgagtatcttcaccaggactgtaacgttgtattgaatggcctcaaaaaggcctttgcttctatagacttgagcttgccagagaacgcaatgcaagcaccgcttcagtctatcactttgcctgaaacattatgccttgatgctttggattgcggtcccgactttgattatgacggggctcacaatgatcatctagggaatcaggaggatatcacgctaacagagcaatttcccattgcaacaaacccttatgttgctataacttttgacgaggatatccggatggaggatctatcgcatcaaacagaggattttggttcacatgttacccctatggatgtggacaccatccccccacatcaggaacagggtactcatagtcccgtcaatctgacagatgaacgaacaatacataatgacgaggtaaaccttcaaggttctcaaggaatttctggtgttcctagtccgacagacgaacaacggaggcctagtgatgattttacccttccagactgtccggaaagggagactcagaaggattttggatgtcaagatcctggaccaagtcaacctacagaaattcttcatttgagtcatagagactacagttcccctgaaaatgttccagaaatagaagctcaacgcaatgcagtttctgatattagctcagaaacctttccattttcttccagtcataggaatgatgttactgaacaacatgacccaccaacaaatgagaaagccattctttctccaattatggagggaagtatacattctgttgggccatctccagcggtccagccaagttcagaaacaccagcttctgttgcttctttgtcagagggccaacagcatattaatacatctgtttcagttgcaatccaatcaacacctcgtattgaacagccacctcttgaacagccacttattgagcagccaagaccaaggaaaagaaaaaagcagtactttgatgatcctgttgtattatctaataagtttattggaaagagacttaaagatgccagtgatataatccgcaaaaggaagaaacttccgtcctctgcattgggtatttggaagttgaaaaacgttttaagaaaggaacaagtgttccttcagccttcattaaccgggttgtgctctgatcttagtaacatttacgacaaaacatacatatctacaaaatcccatttgtttgaggaagctcttccagaccctaggccaacgtctccttctcccacaaccgaagtggtctcagaagatggggctgtggtgtctcctcttcctcctttctctcctcttacaattgatgtctccccagagcacagggttggagactctgtccctgccaatgaatcttcgccagtgaagggtctacaatccccttcttctcctgcaactgggtctggccaagacgctgaacaatttagaggtgtcgaacatgatggggttttacccgattcgcctacaatcaagcgttctctgatgatagatgactttactcctgccccatcaccaaaagtgggatcagcttcagttcattcattggaaataaataccggaactcaaatactgcagacaccagatttacaagtgtcagctggatctgaatttggaacaccgacaattttaggagagggtggggtacaccctgattacactggtccttcacataaccctgagtcaatgactgcagaagcagaagtcttgaagagttatgatcttattgatgtaaaacaagaagtcccttatggtgacattagtttgaagttgactcaaaccctctcaaaggctcaaatctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

671

Amino Acids

73.37

Weight (kDa)

4.98

Isoelectric Point (pI)

62.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59550 AT4G05360
fragaria_vesca	FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520
malus_domestica	MD02G1316900.v1.1 MD07G1005000.v1.1
prunus_persica	Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1
pyrus_communis	pycom07g00410
rosa_chinensis	RchiOBHm_Chr1g0314311
rosa_laevigata	RLG00000030767
rosa_multiflora	Rmu_sc0000343.1_g000013 Rmu_sc0002833.1_g000005 Rmu_sc0042953.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331970
rosa_rugosa	Rorug01G0000900 Rorug01G0000900
rosa_samantha	Rh1AG010000 Rh1BG002900 Rh1CG010300 Rh1DG005400
rosa_wichuraiana	Rw1G000450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	171
AccI	GTMKAC	2 cut(s)	982, 1588
AccIII	TCCGGA	2 cut(s)	489, 727
AciI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
AclI	AACGTT	2 cut(s)	237, 1302
AclWI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
AcoI	YGGCCR	1 cut(s)	1621
AcsI	RAATTY	3 cut(s)	657, 789, 1823
AcuI	CTGAAG	3 cut(s)	299, 1313, 1731
AfaI	GTAC	3 cut(s)	583, 1178, 1860
AfiI	CCNNNNNNNGG	8 cut(s)	259, 496, 571, 906, 1583, 1613, 1736, 2002
AflIII	ACRYGT	1 cut(s)	532
AgsI	TTSAA	7 cut(s)	247, 644, 1115, 1130, 1297, 1924, 1981
AjnI	CCWGG	2 cut(s)	225, 766
AjuI	GAANNNNNNNTTGG	4 cut(s)	23, 55, 1429, 1461
AloI	GAACNNNNNNTCC	4 cut(s)	1307, 1308, 1339, 1340
AluBI	AGCT	7 cut(s)	285, 848, 876, 1034, 1418, 1745, 1814
AluI	AGCT	7 cut(s)	285, 848, 876, 1034, 1418, 1745, 1814
Alw21I	GWGCWC	2 cut(s)	1355, 1539
Alw26I	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
AlwI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
AlwNI	CAGNNNCTG	2 cut(s)	866, 1037
Ama87I	CYCGRG	1 cut(s)	140
Aor13HI	TCCGGA	2 cut(s)	489, 727
AoxI	GGCC	8 cut(s)	34, 250, 261, 695, 995, 1057, 1433, 1621
ApaI	GGGCCC	1 cut(s)	38
ApeKI	GCWGC	3 cut(s)	59, 70, 1147
ApoI	RAATTY	3 cut(s)	657, 789, 1823
AseI	ATTAAT	1 cut(s)	1071
Asp700I	GAANNNNTTC	4 cut(s)	792, 831, 885, 1419
AspA2I	CCTAGG	1 cut(s)	1430
AspLEI	GCGC	1 cut(s)	59
AspS9I	GGNCC	8 cut(s)	34, 35, 365, 770, 995, 1009, 1057, 1877
AsuC2I	CCSGG	1 cut(s)	1345
AsuHPI	GGTGA	3 cut(s)	215, 1719, 1979
AvaI	CYCGRG	1 cut(s)	140
AvaII	GGWCC	4 cut(s)	365, 770, 1009, 1877
AvrII	CCTAGG	1 cut(s)	1430
BaeGI	GKGCMC	2 cut(s)	38, 174
BalI	TGGCCA	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	171
BanII	GRGCYC	2 cut(s)	38, 391
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
Bbv12I	GWGCWC	2 cut(s)	1355, 1539
BbvI	GCAGC	3 cut(s)	46, 82, 1159
BccI	CCATC	7 cut(s)	72, 487, 566, 1006, 1469, 1652, 1732
BciT130I	CCWGG	2 cut(s)	227, 768
BclI	TGATCA	1 cut(s)	397
BcnI	CCSGG	1 cut(s)	1345
BcoDI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BfaI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
BfmI	CTRYAG	6 cut(s)	68, 273, 783, 814, 1787, 1905
BisI	GCNGC	4 cut(s)	60, 71, 99, 1148
BlnI	CCTAGG	1 cut(s)	1430
BlsI	GCNGC	4 cut(s)	61, 72, 100, 1149
BmcAI	AGTACT	1 cut(s)	1178
Bme1390I	CCNGG	3 cut(s)	227, 768, 1345
Bme18I	GGWCC	4 cut(s)	365, 770, 1009, 1877
BmeT110I	CYCGRG	1 cut(s)	140
BmgT120I	GGNCC	8 cut(s)	34, 35, 365, 770, 995, 1009, 1057, 1877
BmiI	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
BmrFI	CCNGG	3 cut(s)	227, 768, 1345
BmrI	ACTGGG	1 cut(s)	1623
BmsI	GCATC	4 cut(s)	138, 340, 517, 1222
BmuI	ACTGGG	1 cut(s)	1623
BpmI	CTGGAG	1 cut(s)	987
BpuEI	CTTGAG	3 cut(s)	65, 301, 636
BpuMI	CCSGG	1 cut(s)	1345
BsaI	GGTCTC	1 cut(s)	1471
BsaJI	CCNNGG	3 cut(s)	141, 1157, 1430
BsaWI	WCCGGW	3 cut(s)	489, 727, 1772
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 685, 715, 1539, 1569
Bsc4I	CCNNNNNNNGG	8 cut(s)	259, 496, 571, 906, 1583, 1613, 1736, 2002
Bse1I	ACTGG	5 cut(s)	900, 1236, 1577, 1618, 1879
Bse3DI	GCAATG	3 cut(s)	306, 444, 862
BseAI	TCCGGA	2 cut(s)	489, 727
BseBI	CCWGG	2 cut(s)	227, 768
BseDI	CCNNGG	3 cut(s)	141, 1157, 1430
BseGI	GGATG	5 cut(s)	108, 498, 553, 558, 761
BseLI	CCNNNNNNNGG	8 cut(s)	259, 496, 571, 906, 1583, 1613, 1736, 2002
BseMI	GCAATG	3 cut(s)	306, 444, 862
BseMII	CTCAG	5 cut(s)	172, 755, 891, 1482, 1884
BseNI	ACTGG	5 cut(s)	900, 1236, 1577, 1618, 1879
BseRI	GAGGAG	2 cut(s)	1482, 1500
BseSI	GKGCMC	2 cut(s)	38, 174
BseXI	GCAGC	3 cut(s)	46, 82, 1159
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BshNI	GGYRCC	1 cut(s)	171
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	1355, 1539
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	4 cut(s)	490, 728, 1344, 1773
BslFI	GGGAC	5 cut(s)	73, 351, 576, 1541, 1943
BslI	CCNNNNNNNGG	8 cut(s)	259, 496, 571, 906, 1583, 1613, 1736, 2002
BsmAI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BsmBI	CGTCTC	1 cut(s)	1446
BsmFI	GGGAC	5 cut(s)	73, 351, 576, 1541, 1943
BsnI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
Bso31I	GGTCTC	1 cut(s)	1471
BsoBI	CYCGRG	1 cut(s)	140
Bsp120I	GGGCCC	1 cut(s)	34
Bsp1286I	GDGCHC	5 cut(s)	38, 174, 391, 1355, 1539
Bsp13I	TCCGGA	2 cut(s)	489, 727
Bsp143I	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
BspACI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
BspANI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BspCNI	CTCAG	5 cut(s)	171, 754, 890, 1481, 1885
BspEI	TCCGGA	2 cut(s)	489, 727
BspLI	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
BspMAI	CTGCAG	3 cut(s)	72, 1791, 1909
BspPI	GGATC	5 cut(s)	507, 758, 1181, 1747, 1825
BspQI	GCTCTTC	1 cut(s)	1425
BspT107I	GGYRCC	1 cut(s)	171
BspTNI	GGTCTC	1 cut(s)	1471
BsrDI	GCAATG	3 cut(s)	306, 444, 862
BsrI	ACTGG	5 cut(s)	900, 1236, 1577, 1618, 1879
BssECI	CCNNGG	3 cut(s)	141, 1157, 1430
BssMI	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
BssNAI	GTATAC	1 cut(s)	983
BssT1I	CCWWGG	2 cut(s)	1157, 1430
Bst1107I	GTATAC	1 cut(s)	983
Bst2UI	CCWGG	2 cut(s)	227, 768
Bst4CI	ACNGT	5 cut(s)	49, 121, 233, 725, 818
Bst6I	CTCTTC	3 cut(s)	1425, 1500, 1919
BstC8I	GCNNGC	2 cut(s)	287, 306
BstDEI	CTNAG	6 cut(s)	158, 741, 877, 1361, 1468, 1893
BstENI	CCTNNNNNAGG	2 cut(s)	257, 2000
BstF5I	GGATG	5 cut(s)	108, 498, 553, 558, 761
BstHHI	GCGC	1 cut(s)	59
BstKTI	GATC	9 cut(s)	127, 400, 502, 766, 1189, 1360, 1742, 1820, 1936
BstMAI	GTCTC	8 cut(s)	731, 804, 1216, 1446, 1471, 1494, 1531, 1542
BstMBI	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	4 cut(s)	305, 310, 433, 1040
BstNI	CCWGG	2 cut(s)	227, 768
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	3 cut(s)	225, 766, 1343
BstSFI	CTRYAG	6 cut(s)	68, 273, 783, 814, 1787, 1905
BstSLI	GKGCMC	2 cut(s)	38, 174
BstV1I	GCAGC	3 cut(s)	46, 82, 1159
BstX2I	RGATCY	3 cut(s)	499, 763, 1817
BstYI	RGATCY	3 cut(s)	499, 763, 1817
BstZ17I	GTATAC	1 cut(s)	983
BsuRI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BtsCI	GGATG	5 cut(s)	108, 498, 553, 558, 761
BtsIMutI	CAGTG	3 cut(s)	1243, 1584, 1872
Cac8I	GCNNGC	2 cut(s)	287, 306
CaiI	CAGNNNCTG	2 cut(s)	866, 1037
CfoI	GCGC	1 cut(s)	59
Cfr13I	GGNCC	8 cut(s)	34, 35, 365, 770, 995, 1009, 1057, 1877
CseI	GACGC	1 cut(s)	1637
Csp6I	GTAC	3 cut(s)	582, 1177, 1859
CspCI	CAANNNNNGTGG	2 cut(s)	1443, 1478
CviAII	CATG	4 cut(s)	133, 533, 929, 1655
CviQI	GTAC	3 cut(s)	582, 1177, 1859
DdeI	CTNAG	6 cut(s)	158, 741, 877, 1361, 1468, 1893
DpnI	GATC	9 cut(s)	126, 399, 501, 765, 1188, 1359, 1741, 1819, 1935
DpnII	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
EaeI	YGGCCR	1 cut(s)	1621
Eam1104I	CTCTTC	3 cut(s)	1425, 1500, 1919
EarI	CTCTTC	3 cut(s)	1425, 1500, 1919
Eco130I	CCWWGG	2 cut(s)	1157, 1430
Eco147I	AGGCCT	2 cut(s)	263, 697
Eco24I	GRGCYC	2 cut(s)	38, 391
Eco31I	GGTCTC	1 cut(s)	1471
Eco32I	GATATC	2 cut(s)	421, 487
Eco47I	GGWCC	4 cut(s)	365, 770, 1009, 1877
Eco57I	CTGAAG	3 cut(s)	299, 1313, 1731
Eco88I	CYCGRG	1 cut(s)	140
EcoNI	CCTNNNNNAGG	2 cut(s)	257, 2000
EcoO109I	RGGNCCY	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	225, 766
EcoRV	GATATC	2 cut(s)	421, 487
EcoT14I	CCWWGG	2 cut(s)	1157, 1430
EcoT38I	GRGCYC	2 cut(s)	38, 391
ErhI	CCWWGG	2 cut(s)	1157, 1430
Esp3I	CGTCTC	1 cut(s)	1446
FaeI	CATG	4 cut(s)	136, 536, 932, 1658
FalI	AAGNNNNNCTT	8 cut(s)	297, 329, 942, 974, 1163, 1195, 1311, 1343
FaqI	GGGAC	5 cut(s)	73, 351, 576, 1541, 1943
FatI	CATG	4 cut(s)	132, 532, 928, 1654
FbaI	TGATCA	1 cut(s)	397
FblI	GTMKAC	2 cut(s)	982, 1588
Fnu4HI	GCNGC	4 cut(s)	60, 71, 99, 1148
FokI	GGATG	5 cut(s)	95, 505, 545, 560, 768
FriOI	GRGCYC	2 cut(s)	38, 391
Fsp4HI	GCNGC	4 cut(s)	60, 71, 99, 1148
FspBI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
GlaI	GCGC	1 cut(s)	58
GluI	GCNGC	4 cut(s)	60, 71, 99, 1148
GsuI	CTGGAG	1 cut(s)	987
HaeIII	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
HapII	CCGG	4 cut(s)	490, 728, 1344, 1773
HgaI	GACGC	1 cut(s)	1637
HhaI	GCGC	1 cut(s)	59
Hin1II	CATG	4 cut(s)	136, 536, 932, 1658
Hin6I	GCGC	1 cut(s)	57
HinP1I	GCGC	1 cut(s)	57
HincII	GTYRAC	2 cut(s)	779, 1986
HindII	GTYRAC	2 cut(s)	779, 1986
HinfI	GANTC	9 cut(s)	78, 409, 739, 802, 1550, 1568, 1673, 1895, 1987
HpaII	CCGG	4 cut(s)	490, 728, 1344, 1773
HphI	GGTGA	3 cut(s)	215, 1719, 1979
Hpy166II	GTNNAC	8 cut(s)	530, 553, 637, 779, 983, 1589, 1861, 1986
Hpy8I	GTNNAC	8 cut(s)	530, 553, 637, 779, 983, 1589, 1861, 1986
Hpy99I	CGWCG	1 cut(s)	125
HpyCH4III	ACNGT	5 cut(s)	49, 121, 233, 725, 818
HpyCH4IV	ACGT	3 cut(s)	237, 1302, 1439
HpyF10VI	GCNNNNNNNGC	4 cut(s)	305, 310, 433, 1040
HpyF3I	CTNAG	6 cut(s)	158, 741, 877, 1361, 1468, 1893
HpySE526I	ACGT	3 cut(s)	237, 1302, 1439
Hsp92II	CATG	4 cut(s)	136, 536, 932, 1658
HspAI	GCGC	1 cut(s)	57
Kpn2I	TCCGGA	2 cut(s)	489, 727
Ksp22I	TGATCA	1 cut(s)	397
Kzo9I	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
LguI	GCTCTTC	1 cut(s)	1425
Lsp1109I	GCAGC	3 cut(s)	46, 82, 1159
LweI	GCATC	4 cut(s)	138, 340, 517, 1222
MaeI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
MaeII	ACGT	3 cut(s)	237, 1302, 1439
MaeIII	GTNAC	5 cut(s)	233, 535, 916, 1364, 1967
MalI	GATC	9 cut(s)	126, 399, 501, 765, 1188, 1359, 1741, 1819, 1935
MboI	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	3 cut(s)	499, 763, 1817
MhlI	GDGCHC	5 cut(s)	38, 174, 391, 1355, 1539
MlsI	TGGCCA	1 cut(s)	1623
MluCI	AATT	8 cut(s)	437, 657, 789, 966, 1518, 1637, 1823, 1839
MluNI	TGGCCA	1 cut(s)	1623
MlyI	GAGTC	6 cut(s)	72, 733, 811, 1544, 1904, 1981
MmeI	TCCRAC	2 cut(s)	701, 1525
Mox20I	TGGCCA	1 cut(s)	1623
MroI	TCCGGA	2 cut(s)	489, 727
MroXI	GAANNNNTTC	4 cut(s)	792, 831, 885, 1419
MscI	TGGCCA	1 cut(s)	1623
MseI	TTAA	4 cut(s)	1071, 1227, 1307, 1340
MslI	CAYNNNNRTG	1 cut(s)	909
Msp20I	TGGCCA	1 cut(s)	1623
MspA1I	CMGCKG	2 cut(s)	1007, 1814
MspI	CCGG	4 cut(s)	490, 728, 1344, 1773
MspR9I	CCNGG	3 cut(s)	227, 768, 1345
MunI	CAATTG	1 cut(s)	1518
MvaI	CCWGG	2 cut(s)	227, 768
MwoI	GCNNNNNNNGC	4 cut(s)	305, 310, 433, 1040
NciI	CCSGG	1 cut(s)	1345
NdeII	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
NlaIII	CATG	4 cut(s)	136, 536, 932, 1658
NlaIV	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
NmuCI	GTSAC	1 cut(s)	1967
NspI	RCATGY	1 cut(s)	536
PceI	AGGCCT	2 cut(s)	263, 697
PciI	ACATGT	1 cut(s)	532
PciSI	GCTCTTC	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdmI	GAANNNNTTC	4 cut(s)	792, 831, 885, 1419
PfeI	GAWTC	3 cut(s)	409, 1568, 1673
PflFI	GACNNNGTC	2 cut(s)	774, 1553
PfoI	TCCNGGA	1 cut(s)	766
PkrI	GCNGC	4 cut(s)	61, 72, 100, 1149
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	6 cut(s)	72, 733, 810, 1544, 1903, 1981
PpsI	GAGTC	6 cut(s)	72, 733, 810, 1544, 1903, 1981
PscI	ACATGT	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1071
Psp1406I	AACGTT	2 cut(s)	237, 1302
Psp6I	CCWGG	2 cut(s)	225, 766
PspGI	CCWGG	2 cut(s)	225, 766
PspN4I	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
PspOMI	GGGCCC	1 cut(s)	34
PspPI	GGNCC	8 cut(s)	34, 35, 365, 770, 995, 1009, 1057, 1877
PsrI	GAACNNNNNNTAC	2 cut(s)	603, 635
PstI	CTGCAG	3 cut(s)	72, 1791, 1909
PstNI	CAGNNNCTG	2 cut(s)	866, 1037
PsuI	RGATCY	3 cut(s)	499, 763, 1817
PsyI	GACNNNGTC	2 cut(s)	774, 1553
PvuI	CGATCG	1 cut(s)	127
PvuII	CAGCTG	1 cut(s)	1814
RsaI	GTAC	3 cut(s)	583, 1178, 1860
RsaNI	GTAC	3 cut(s)	582, 1177, 1859
RseI	CAYNNNNRTG	1 cut(s)	909
SapI	GCTCTTC	1 cut(s)	1425
SaqAI	TTAA	4 cut(s)	1071, 1227, 1307, 1340
SatI	GCNGC	4 cut(s)	60, 71, 99, 1148
Sau3AI	GATC	9 cut(s)	124, 397, 499, 763, 1186, 1357, 1739, 1817, 1933
Sau96I	GGNCC	8 cut(s)	34, 35, 365, 770, 995, 1009, 1057, 1877
ScaI	AGTACT	1 cut(s)	1178
SchI	GAGTC	6 cut(s)	72, 733, 811, 1544, 1904, 1981
ScrFI	CCNGG	3 cut(s)	227, 768, 1345
SduI	GDGCHC	5 cut(s)	38, 174, 391, 1355, 1539
SfaNI	GCATC	4 cut(s)	138, 340, 517, 1222
SfcI	CTRYAG	6 cut(s)	68, 273, 783, 814, 1787, 1905
SinI	GGWCC	4 cut(s)	365, 770, 1009, 1877
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	3 cut(s)	80, 280, 651
SmoI	CTYRAG	3 cut(s)	80, 280, 651
Sse9I	AATT	8 cut(s)	437, 657, 789, 966, 1518, 1637, 1823, 1839
SseBI	AGGCCT	2 cut(s)	263, 697
SsiI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
SspMI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
StuI	AGGCCT	2 cut(s)	263, 697
StyD4I	CCNGG	3 cut(s)	225, 766, 1343
StyI	CCWWGG	2 cut(s)	1157, 1430
TaaI	ACNGT	5 cut(s)	49, 121, 233, 725, 818
TaiI	ACGT	3 cut(s)	240, 1305, 1442
TaqI	TCGA	3 cut(s)	123, 213, 1650
TasI	AATT	8 cut(s)	437, 657, 789, 966, 1518, 1637, 1823, 1839
TatI	WGTACW	1 cut(s)	1176
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	3 cut(s)	409, 1568, 1673
Tru1I	TTAA	4 cut(s)	1071, 1227, 1307, 1340
Tru9I	TTAA	4 cut(s)	1071, 1227, 1307, 1340
TscAI	CASTG	3 cut(s)	1243, 1584, 1879
TseFI	GTSAC	1 cut(s)	1967
TseI	GCWGC	3 cut(s)	59, 70, 1147
Tsp45I	GTSAC	1 cut(s)	1967
TspDTI	ATGAA	6 cut(s)	624, 785, 1326, 1581, 1742, 1746
TspGWI	ACGGA	2 cut(s)	706, 1257
TspRI	CASTG	3 cut(s)	1243, 1584, 1879
Tth111I	GACNNNGTC	2 cut(s)	774, 1553
VpaK11BI	GGWCC	4 cut(s)	365, 770, 1009, 1877
VspI	ATTAAT	1 cut(s)	1071
XagI	CCTNNNNNAGG	2 cut(s)	257, 2000
XapI	RAATTY	3 cut(s)	657, 789, 1823
XceI	RCATGY	1 cut(s)	536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmaJI	CCTAGG	1 cut(s)	1430
XmiI	GTMKAC	2 cut(s)	982, 1588
XmnI	GAANNNNTTC	4 cut(s)	792, 831, 885, 1419
XspI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
ZrmI	AGTACT	1 cut(s)	1178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.