Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005290

Physical Location & Seq

Genomic Coordinates Reverse (-)

534390 .. 540151

Gene Structure 5762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1005000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGTTTTATTCGCAGACGTTCTTGGCTCGGAAGGGCCCATTGGGAACCGTCTGGTGCGCCGCCCACCTCCAGAGCCGGCTGAAGAAGTCCCACTACACCTCCACCGACATCCCCTCCACTGTTGATCGTATCATGTTTCCGGACGTTCCTATTGCACTGAGAATGTCGGGACATCTTCTATTTGGTGTTGTTAGGATATACTCGAAGCAGGTCGACTATCTTTACCAGGACTGTAATGTTGTTTTGACTACCCTAAGAAAGACCTTTGCTTCCATAGACTTGGATTTGCCAGAGAACGCAAGGCAAGCTCCGGTTCAGTCCATCACTTTGCCTGAAACATTTGATCTTGATGCTTTGGATTTGGATGGAGGCGTGTTCGATCAAATTCCTATTGCAACAGACCGTTATGTCATTATAACTTTTGACGAGGATATCCAGAACGAGGTTTTTGGTTCAGATGTTGCTCCCATGGATGAGGACATCCACTCTACAACTCCAGGCGACGGTGTTCCAAGTGATCACTTCACCCCTCCAAATAAAGAAGCTCCAGAAGTAGATGTTCCAAATGATTTTGTCTTCCAAGATTCTGTTCCAAGTAACTATAGAGAAACGGGAGTTATGCAAGATGTTCTTCCCAAAGACAGTTCCCCTCAGTATGTTCAACCAACAGAAGTTATGCAAGATGATGCTCCTCTTCTAGATGACAGTTCCCCTCGACATGTTCAACCAATGGAAGTTATGCGAGATGCTGTTCCTCCGGAAATTGTTCCTACAGTTTCTCTTAATAACGGGAATGATATTACTGAACAAGAAAAATCCATTAACCCAGAAATGAATGAGAAAGACATACTTTCTCCAATTACAGAGGAAAATACACCTTCTGGTGGACCATCTCCATCGCCTCTGCCAAGTTCAGGACCACGAGCTTCTGTTGCTTCTTTGCCTGACATGAATGACAACGATGTTTCCTTTCAAATGCAATCAACACCACATCTTGAGCAGCCAAGAGCAAGAGCAAGGAAGAGAAAGCAGTATTTTGATGAGACCCTTGTGTTATCCAATGAGTTTATGAATAAGACACTTCAAGATGTTAGTGATTTAAATCGTAAAAGGAGGAATATTCCGTGCTCTACTTTGGGTGTTTGGAAGTTGAACAACAGTTTAAGAAAGGAACAAGTGTTCTTCCGGCCTTCATTAACAGGATTGTGTTTGGCTCTGCATAACATTTTCGACAGAGGCTACATATCCAAACAGTCCCATTTGTTTGAGGGAGTTCTTCCAGTCTCTGGATCTACAACACCTCCTCCTACAACATCTCTTCCTCCTACAACTGAATTCTCCCCGGAGCGCGGTGTTCCACCATATTTTCCTGTCACTGAAGCTTCCACAGAGTTTTATGGCGCACCATCTCCCCCAAAAATTGAACGTTGTCATCATGTTGAAGAACATGATGGTGGAAATAACTTACCAGAGTATGAGGGTGCACAATCTCCGCTGCAAATTGAACGTTTTCAGCATGTTGAAGAACATGATGGTGGAAACAACTTACCAGAGTATGAGGGTGCACAATCTCCTGCCACTCAAAGTGACTTTATTCCTGTTCCGTCTCCAAACTTAATGTCAGCTTCAGTTCCTCCATTGGAAACAAGCACGGGAACTCAAATACTGCTGACACCAGATCAGACAGCATTGACTAGATTTCACGAGTCTGTAAATGAAACACCGAAGACAATGTTTGAGGGGTGGCTAGGTCTATCAAATAATCCTGAGTTAAACGATTCTGCAGAAGCAGGTCTTTTTTTTCTGGAAGCAGATGGCAATACACCAGCTGGATCTCAAGCAACACAAGGAGTACCGGGATCTCAAGGGACACAAGGAGTTGATTCACTGTCTGTTAGAACCAGAGCTGTGGCTCAATTTTTAAAGAGGGAATCTTCTATCACCTCAACCTCAGAAGACGTAACTGGAGATCTCAGCTTGGACAAAATTTTAGAAGGAAAAACTAGAAAGCTATGTGCTCGAATGTTCTATGAAACACTGGTTTTGAAGACTTATGGTCTTGTTGATGTAAAACAAGAAGTACCTTACGGTGACATTAGTTTGACATTGACCCGAACCCTATCAAAGGCTCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

713

Amino Acids

78.58

Weight (kDa)

4.68

Isoelectric Point (pI)

56.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 102	5e-37	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	657 - 705	1.5e-18	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59550 AT4G05360
fragaria_vesca	FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520 FvH4_7g00520
malus_domestica	MD02G1316900.v1.1 MD07G1005000.v1.1
prunus_persica	Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1 Prupe.2G007300_v2.0.a1
pyrus_communis	pycom07g00410
rosa_chinensis	RchiOBHm_Chr1g0314311
rosa_laevigata	RLG00000030767
rosa_multiflora	Rmu_sc0000343.1_g000013 Rmu_sc0002833.1_g000005 Rmu_sc0042953.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331970
rosa_rugosa	Rorug01G0000900 Rorug01G0000900
rosa_samantha	Rh1AG010000 Rh1BG002900 Rh1CG010300 Rh1DG005400
rosa_wichuraiana	Rw1G000450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	416
AasI	GACNNNNNNGTC	1 cut(s)	407
Acc36I	ACCTGC	2 cut(s)	199, 1781
AccB7I	CCANNNNNTGG	1 cut(s)	1286
AccI	GTMKAC	1 cut(s)	213
AccII	CGCG	1 cut(s)	1350
AccIII	TCCGGA	2 cut(s)	139, 757
AciI	CCGC	3 cut(s)	60, 1350, 1493
AclI	AACGTT	2 cut(s)	1426, 1507
AclWI	GGATC	3 cut(s)	1297, 1840, 1867
AcsI	RAATTY	4 cut(s)	384, 1334, 1986, 2133
AcuI	CTGAAG	3 cut(s)	101, 1398, 1611
AfaI	GTAC	2 cut(s)	1854, 2082
AfiI	CCNNNNNNNGG	7 cut(s)	442, 503, 884, 914, 1286, 1349, 2125
AflIII	ACRYGT	1 cut(s)	718
AhdI	GACNNNNNGTC	1 cut(s)	2055
AjnI	CCWGG	2 cut(s)	225, 496
AjuI	GAANNNNNNNTTGG	4 cut(s)	23, 55, 573, 605
AloI	GAACNNNNNNTCC	2 cut(s)	1163, 1195
AluBI	AGCT	9 cut(s)	308, 545, 926, 1382, 1625, 1829, 1907, 1977, 2011
AluI	AGCT	9 cut(s)	308, 545, 926, 1382, 1625, 1829, 1907, 1977, 2011
Alw21I	GWGCWC	4 cut(s)	1130, 1486, 1567, 2020
Alw26I	GTCTC	3 cut(s)	1037, 1288, 1611
Alw44I	GTGCAC	2 cut(s)	1482, 1563
AlwI	GGATC	3 cut(s)	1297, 1840, 1867
AlwNI	CAGNNNCTG	1 cut(s)	1286
Aor13HI	TCCGGA	2 cut(s)	139, 757
AoxI	GGCC	2 cut(s)	34, 1187
ApaI	GGGCCC	1 cut(s)	38
ApaLI	GTGCAC	2 cut(s)	1482, 1563
ApeKI	GCWGC	2 cut(s)	1000, 1495
ApoI	RAATTY	4 cut(s)	384, 1334, 1986, 2133
ArsI	GACNNNNNNTTYG	2 cut(s)	1604, 1636
Asp700I	GAANNNNTTC	2 cut(s)	765, 1509
AspLEI	GCGC	3 cut(s)	59, 1350, 1403
AspS9I	GGNCC	4 cut(s)	34, 35, 887, 917
AsuC2I	CCSGG	2 cut(s)	1343, 1857
AsuHPI	GGTGA	3 cut(s)	517, 1933, 2102
AvaII	GGWCC	2 cut(s)	887, 917
BaeGI	GKGCMC	3 cut(s)	38, 1486, 1567
BanII	GRGCYC	1 cut(s)	38
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
BauI	CACGAG	2 cut(s)	921, 1703
BbsI	GAAGAC	4 cut(s)	568, 1733, 1962, 2054
Bbv12I	GWGCWC	4 cut(s)	1130, 1486, 1567, 2020
BbvI	GCAGC	2 cut(s)	1012, 1482
BccI	CCATC	8 cut(s)	329, 359, 898, 904, 1414, 1445, 1526, 1808
BciT130I	CCWGG	2 cut(s)	227, 498
BclI	TGATCA	1 cut(s)	517
BcnI	CCSGG	2 cut(s)	1343, 1857
BcoDI	GTCTC	3 cut(s)	1037, 1288, 1611
BfaI	CTAG	4 cut(s)	698, 1695, 1748, 2004
BfmI	CTRYAG	3 cut(s)	601, 771, 1782
BfuAI	ACCTGC	2 cut(s)	199, 1781
BglII	AGATCT	1 cut(s)	1969
BisI	GCNGC	3 cut(s)	60, 1001, 1496
BlsI	GCNGC	3 cut(s)	61, 1002, 1497
Bme1390I	CCNGG	4 cut(s)	227, 498, 1343, 1857
Bme18I	GGWCC	2 cut(s)	887, 917
BmeRI	GACNNNNNGTC	1 cut(s)	2055
BmgT120I	GGNCC	4 cut(s)	34, 35, 887, 917
BmiI	GGNNCC	2 cut(s)	36, 46
BmrFI	CCNGG	4 cut(s)	227, 498, 1343, 1857
BmsI	GCATC	3 cut(s)	340, 676, 736
BpiI	GAAGAC	4 cut(s)	568, 1733, 1962, 2054
BpmI	CTGGAG	4 cut(s)	53, 480, 531, 1986
BpuEI	CTTGAG	3 cut(s)	1016, 1821, 1848
BpuMI	CCSGG	2 cut(s)	1343, 1857
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaI	GGTCTC	1 cut(s)	1037
BsaJI	CCNNGG	2 cut(s)	468, 1341
BsaWI	WCCGGW	3 cut(s)	139, 310, 757
BsaXI	ACNNNNNCTCC	8 cut(s)	83, 98, 113, 128, 1285, 1288, 1315, 1318
Bsc4I	CCNNNNNNNGG	7 cut(s)	442, 503, 884, 914, 1286, 1349, 2125
Bse118I	RCCGGY	1 cut(s)	75
Bse1I	ACTGG	3 cut(s)	1280, 1969, 2043
Bse8I	GATNNNNATC	1 cut(s)	1101
BseAI	TCCGGA	2 cut(s)	139, 757
BseBI	CCWGG	2 cut(s)	227, 498
BseDI	CCNNGG	2 cut(s)	468, 1341
BseGI	GGATG	4 cut(s)	108, 370, 478, 480
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	7 cut(s)	442, 503, 884, 914, 1286, 1349, 2125
BseMII	CTCAG	5 cut(s)	149, 665, 1758, 1965, 1987
BseNI	ACTGG	3 cut(s)	1280, 1969, 2043
BseRI	GAGGAG	2 cut(s)	681, 1293
BseSI	GKGCMC	3 cut(s)	38, 1486, 1567
BseXI	GCAGC	2 cut(s)	1012, 1482
Bsh1236I	CGCG	1 cut(s)	1350
BshFI	GGCC	2 cut(s)	36, 1189
BsiHKAI	GWGCWC	4 cut(s)	1130, 1486, 1567, 2020
BsiSI	CCGG	7 cut(s)	76, 140, 311, 758, 1186, 1343, 1856
BslFI	GGGAC	4 cut(s)	73, 183, 1240, 1882
BslI	CCNNNNNNNGG	7 cut(s)	442, 503, 884, 914, 1286, 1349, 2125
BsmAI	GTCTC	3 cut(s)	1037, 1288, 1611
BsmBI	CGTCTC	1 cut(s)	1611
BsmFI	GGGAC	4 cut(s)	73, 183, 1240, 1882
BsnI	GGCC	2 cut(s)	36, 1189
Bso31I	GGTCTC	1 cut(s)	1037
Bsp120I	GGGCCC	1 cut(s)	34
Bsp1286I	GDGCHC	5 cut(s)	38, 1130, 1486, 1567, 2020
Bsp13I	TCCGGA	2 cut(s)	139, 757
Bsp143I	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
Bsp19I	CCATGG	1 cut(s)	468
BspACI	CCGC	3 cut(s)	60, 1350, 1493
BspANI	GGCC	2 cut(s)	36, 1189
BspCNI	CTCAG	5 cut(s)	150, 664, 1759, 1964, 1986
BspEI	TCCGGA	2 cut(s)	139, 757
BspFNI	CGCG	1 cut(s)	1350
BspLI	GGNNCC	2 cut(s)	36, 46
BspMAI	CTGCAG	1 cut(s)	1786
BspMI	ACCTGC	2 cut(s)	199, 1781
BspPI	GGATC	3 cut(s)	1297, 1840, 1867
BspTNI	GGTCTC	1 cut(s)	1037
BsrFI	RCCGGY	1 cut(s)	75
BsrI	ACTGG	3 cut(s)	1280, 1969, 2043
BssAI	RCCGGY	1 cut(s)	75
BssECI	CCNNGG	2 cut(s)	468, 1341
BssMI	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
BssSI	CACGAG	2 cut(s)	921, 1703
BssT1I	CCWWGG	1 cut(s)	468
Bst2BI	CACGAG	2 cut(s)	921, 1703
Bst2UI	CCWGG	2 cut(s)	227, 498
Bst6I	CTCTTC	3 cut(s)	699, 1016, 1323
BstC8I	GCNNGC	2 cut(s)	77, 306
BstDEI	CTNAG	6 cut(s)	158, 254, 651, 1767, 1951, 1973
BstDSI	CCRYGG	1 cut(s)	468
BstENI	CCTNNNNNAGG	1 cut(s)	2123
BstF5I	GGATG	4 cut(s)	108, 370, 478, 480
BstFNI	CGCG	1 cut(s)	1350
BstHHI	GCGC	3 cut(s)	59, 1350, 1403
BstKTI	GATC	9 cut(s)	127, 346, 382, 520, 1292, 1681, 1835, 1862, 1972
BstMAI	GTCTC	3 cut(s)	1037, 1288, 1611
BstMBI	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
BstMWI	GCNNNNNNNGC	2 cut(s)	305, 932
BstNI	CCWGG	2 cut(s)	227, 498
BstNSI	RCATGY	2 cut(s)	722, 1520
BstSCI	CCNGG	4 cut(s)	225, 496, 1341, 1855
BstSFI	CTRYAG	3 cut(s)	601, 771, 1782
BstSLI	GKGCMC	3 cut(s)	38, 1486, 1567
BstUI	CGCG	1 cut(s)	1350
BstV1I	GCAGC	2 cut(s)	1012, 1482
BstV2I	GAAGAC	4 cut(s)	568, 1733, 1962, 2054
BstX2I	RGATCY	4 cut(s)	1289, 1832, 1859, 1969
BstXI	CCANNNNNNTGG	2 cut(s)	280, 1909
BstYI	RGATCY	4 cut(s)	1289, 1832, 1859, 1969
BsuRI	GGCC	2 cut(s)	36, 1189
BtgI	CCRYGG	1 cut(s)	468
BtgZI	GCGATG	1 cut(s)	882
BtsCI	GGATG	4 cut(s)	108, 370, 478, 480
BtsIMutI	CAGTG	5 cut(s)	117, 155, 1374, 1886, 2036
BveI	ACCTGC	2 cut(s)	199, 1781
Cac8I	GCNNGC	2 cut(s)	77, 306
CaiI	CAGNNNCTG	1 cut(s)	1286
CfoI	GCGC	3 cut(s)	59, 1350, 1403
Cfr10I	RCCGGY	1 cut(s)	75
Cfr13I	GGNCC	4 cut(s)	34, 35, 887, 917
Csp6I	GTAC	2 cut(s)	1853, 2081
CviAII	CATG	8 cut(s)	133, 469, 719, 949, 1436, 1448, 1517, 1529
CviQI	GTAC	2 cut(s)	1853, 2081
DdeI	CTNAG	6 cut(s)	158, 254, 651, 1767, 1951, 1973
DpnI	GATC	9 cut(s)	126, 345, 381, 519, 1291, 1680, 1834, 1861, 1971
DpnII	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
DraI	TTTAAA	2 cut(s)	1101, 1923
DrdI	GACNNNNNNGTC	1 cut(s)	407
DriI	GACNNNNNGTC	1 cut(s)	2055
DseDI	GACNNNNNNGTC	1 cut(s)	407
Eam1104I	CTCTTC	3 cut(s)	699, 1016, 1323
Eam1105I	GACNNNNNGTC	1 cut(s)	2055
EarI	CTCTTC	3 cut(s)	699, 1016, 1323
Eco130I	CCWWGG	1 cut(s)	468
Eco24I	GRGCYC	1 cut(s)	38
Eco31I	GGTCTC	1 cut(s)	1037
Eco32I	GATATC	1 cut(s)	433
Eco47I	GGWCC	2 cut(s)	887, 917
Eco57I	CTGAAG	3 cut(s)	101, 1398, 1611
EcoNI	CCTNNNNNAGG	1 cut(s)	2123
EcoO109I	RGGNCCY	1 cut(s)	34
EcoRI	GAATTC	1 cut(s)	1334
EcoRII	CCWGG	2 cut(s)	225, 496
EcoRV	GATATC	1 cut(s)	433
EcoT14I	CCWWGG	1 cut(s)	468
EcoT38I	GRGCYC	1 cut(s)	38
ErhI	CCWWGG	1 cut(s)	468
Esp3I	CGTCTC	1 cut(s)	1611
FaeI	CATG	8 cut(s)	136, 472, 722, 952, 1439, 1451, 1520, 1532
FalI	AAGNNNNNCTT	6 cut(s)	615, 647, 834, 866, 1779, 1811
FaqI	GGGAC	4 cut(s)	73, 183, 1240, 1882
FatI	CATG	8 cut(s)	132, 468, 718, 948, 1435, 1447, 1516, 1528
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	1 cut(s)	213
Fnu4HI	GCNGC	3 cut(s)	60, 1001, 1496
FokI	GGATG	4 cut(s)	95, 377, 467, 485
FriOI	GRGCYC	1 cut(s)	38
Fsp4HI	GCNGC	3 cut(s)	60, 1001, 1496
FspBI	CTAG	4 cut(s)	698, 1695, 1748, 2004
GlaI	GCGC	3 cut(s)	58, 1349, 1402
GluI	GCNGC	3 cut(s)	60, 1001, 1496
GsuI	CTGGAG	4 cut(s)	53, 480, 531, 1986
HaeIII	GGCC	2 cut(s)	36, 1189
HapII	CCGG	7 cut(s)	76, 140, 311, 758, 1186, 1343, 1856
HhaI	GCGC	3 cut(s)	59, 1350, 1403
Hin1II	CATG	8 cut(s)	136, 472, 722, 952, 1439, 1451, 1520, 1532
Hin6I	GCGC	3 cut(s)	57, 1348, 1401
HinP1I	GCGC	3 cut(s)	57, 1348, 1401
HincII	GTYRAC	1 cut(s)	214
HindII	GTYRAC	1 cut(s)	214
HindIII	AAGCTT	1 cut(s)	1380
HinfI	GANTC	5 cut(s)	584, 1706, 1778, 1883, 1931
HpaII	CCGG	7 cut(s)	76, 140, 311, 758, 1186, 1343, 1856
HphI	GGTGA	3 cut(s)	517, 1933, 2102
Hpy166II	GTNNAC	4 cut(s)	214, 887, 1484, 1565
Hpy188I	TCNGA	4 cut(s)	30, 457, 1683, 1954
Hpy8I	GTNNAC	4 cut(s)	214, 887, 1484, 1565
Hpy99I	CGWCG	1 cut(s)	506
HpyAV	CCTTC	4 cut(s)	25, 888, 1200, 1988
HpyCH4IV	ACGT	5 cut(s)	17, 144, 1426, 1507, 1959
HpyF10VI	GCNNNNNNNGC	2 cut(s)	305, 932
HpyF3I	CTNAG	6 cut(s)	158, 254, 651, 1767, 1951, 1973
HpySE526I	ACGT	5 cut(s)	17, 144, 1426, 1507, 1959
Hsp92II	CATG	8 cut(s)	136, 472, 722, 952, 1439, 1451, 1520, 1532
HspAI	GCGC	3 cut(s)	57, 1348, 1401
Kpn2I	TCCGGA	2 cut(s)	139, 757
KroI	GCCGGC	1 cut(s)	75
KroNI	GCCGGC	1 cut(s)	77
Ksp22I	TGATCA	1 cut(s)	517
Kzo9I	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
LmnI	GCTCC	5 cut(s)	313, 469, 550, 694, 1345
Lsp1109I	GCAGC	2 cut(s)	1012, 1482
LweI	GCATC	3 cut(s)	340, 676, 736
MaeI	CTAG	4 cut(s)	698, 1695, 1748, 2004
MaeII	ACGT	5 cut(s)	17, 144, 1426, 1507, 1959
MaeIII	GTNAC	5 cut(s)	596, 1372, 1586, 1960, 2090
MalI	GATC	9 cut(s)	126, 345, 381, 519, 1291, 1680, 1834, 1861, 1971
MboI	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
MflI	RGATCY	4 cut(s)	1289, 1832, 1859, 1969
MhlI	GDGCHC	5 cut(s)	38, 1130, 1486, 1567, 2020
MluCI	AATT	9 cut(s)	384, 762, 858, 1334, 1419, 1500, 1916, 1986, 2133
MlyI	GAGTC	1 cut(s)	1715
MroI	TCCGGA	2 cut(s)	139, 757
MroNI	GCCGGC	1 cut(s)	75
MroXI	GAANNNNTTC	2 cut(s)	765, 1509
MseI	TTAA	9 cut(s)	783, 822, 1100, 1163, 1196, 1616, 1772, 1922, 2137
MslI	CAYNNNNRTG	2 cut(s)	1452, 1533
MspA1I	CMGCKG	2 cut(s)	1495, 1829
MspI	CCGG	7 cut(s)	76, 140, 311, 758, 1186, 1343, 1856
MspR9I	CCNGG	4 cut(s)	227, 498, 1343, 1857
MvaI	CCWGG	2 cut(s)	227, 498
MvnI	CGCG	1 cut(s)	1350
MwoI	GCNNNNNNNGC	2 cut(s)	305, 932
NaeI	GCCGGC	1 cut(s)	77
NciI	CCSGG	2 cut(s)	1343, 1857
NcoI	CCATGG	1 cut(s)	468
NdeII	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
NgoMIV	GCCGGC	1 cut(s)	75
NlaIII	CATG	8 cut(s)	136, 472, 722, 952, 1439, 1451, 1520, 1532
NlaIV	GGNNCC	2 cut(s)	36, 46
NmuCI	GTSAC	3 cut(s)	1372, 1586, 2090
NspI	RCATGY	2 cut(s)	722, 1520
PciI	ACATGT	1 cut(s)	718
PdiI	GCCGGC	1 cut(s)	77
PdmI	GAANNNNTTC	2 cut(s)	765, 1509
PfeI	GAWTC	4 cut(s)	584, 1778, 1883, 1931
PflMI	CCANNNNNTGG	1 cut(s)	1286
PkrI	GCNGC	3 cut(s)	61, 1002, 1497
PleI	GAGTC	1 cut(s)	1714
PpsI	GAGTC	1 cut(s)	1714
PscI	ACATGT	1 cut(s)	718
PsiI	TTATAA	1 cut(s)	416
Psp1406I	AACGTT	2 cut(s)	1426, 1507
Psp6I	CCWGG	2 cut(s)	225, 496
PspGI	CCWGG	2 cut(s)	225, 496
PspN4I	GGNNCC	2 cut(s)	36, 46
PspOMI	GGGCCC	1 cut(s)	34
PspPI	GGNCC	4 cut(s)	34, 35, 887, 917
PstI	CTGCAG	1 cut(s)	1786
PstNI	CAGNNNCTG	1 cut(s)	1286
PsuI	RGATCY	4 cut(s)	1289, 1832, 1859, 1969
PvuII	CAGCTG	1 cut(s)	1829
RsaI	GTAC	2 cut(s)	1854, 2082
RsaNI	GTAC	2 cut(s)	1853, 2081
RseI	CAYNNNNRTG	2 cut(s)	1452, 1533
SalI	GTCGAC	1 cut(s)	212
SaqAI	TTAA	9 cut(s)	783, 822, 1100, 1163, 1196, 1616, 1772, 1922, 2137
SatI	GCNGC	3 cut(s)	60, 1001, 1496
Sau3AI	GATC	9 cut(s)	124, 343, 379, 517, 1289, 1678, 1832, 1859, 1969
Sau96I	GGNCC	4 cut(s)	34, 35, 887, 917
SchI	GAGTC	1 cut(s)	1715
ScrFI	CCNGG	4 cut(s)	227, 498, 1343, 1857
SduI	GDGCHC	5 cut(s)	38, 1130, 1486, 1567, 2020
SfaNI	GCATC	3 cut(s)	340, 676, 736
SfcI	CTRYAG	3 cut(s)	601, 771, 1782
SinI	GGWCC	2 cut(s)	887, 917
SmiI	ATTTAAAT	1 cut(s)	1101
SmiMI	CAYNNNNRTG	2 cut(s)	1452, 1533
SmlI	CTYRAG	3 cut(s)	995, 1836, 1863
SmoI	CTYRAG	3 cut(s)	995, 1836, 1863
Sse9I	AATT	9 cut(s)	384, 762, 858, 1334, 1419, 1500, 1916, 1986, 2133
SsiI	CCGC	3 cut(s)	60, 1350, 1493
SspI	AATATT	1 cut(s)	1120
SspMI	CTAG	4 cut(s)	698, 1695, 1748, 2004
StyD4I	CCNGG	4 cut(s)	225, 496, 1341, 1855
StyI	CCWWGG	1 cut(s)	468
SwaI	ATTTAAAT	1 cut(s)	1101
TaiI	ACGT	5 cut(s)	20, 147, 1429, 1510, 1962
TaqI	TCGA	6 cut(s)	203, 213, 378, 715, 1230, 2020
TasI	AATT	9 cut(s)	384, 762, 858, 1334, 1419, 1500, 1916, 1986, 2133
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	4 cut(s)	584, 1778, 1883, 1931
Tru1I	TTAA	9 cut(s)	783, 822, 1100, 1163, 1196, 1616, 1772, 1922, 2137
Tru9I	TTAA	9 cut(s)	783, 822, 1100, 1163, 1196, 1616, 1772, 1922, 2137
TscAI	CASTG	5 cut(s)	124, 162, 1381, 1893, 2043
TseFI	GTSAC	3 cut(s)	1372, 1586, 2090
TseI	GCWGC	2 cut(s)	1000, 1495
Tsp45I	GTSAC	3 cut(s)	1372, 1586, 2090
TspDTI	ATGAA	6 cut(s)	848, 965, 1085, 1182, 1731, 2046
TspGWI	ACGGA	2 cut(s)	1113, 1593
TspRI	CASTG	5 cut(s)	124, 162, 1381, 1893, 2043
Van91I	CCANNNNNTGG	1 cut(s)	1286
VneI	GTGCAC	2 cut(s)	1482, 1563
VpaK11BI	GGWCC	2 cut(s)	887, 917
XagI	CCTNNNNNAGG	1 cut(s)	2123
XapI	RAATTY	4 cut(s)	384, 1334, 1986, 2133
XbaI	TCTAGA	1 cut(s)	697
XceI	RCATGY	2 cut(s)	722, 1520
XmiI	GTMKAC	1 cut(s)	213
XmnI	GAANNNNTTC	2 cut(s)	765, 1509
XspI	CTAG	4 cut(s)	698, 1695, 1748, 2004

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.