AT3G63290
ERF Family

2OG-Fe(II) oxygenase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0016094
Physical Location & Seq
Forward (+)
23381604 .. 23383538
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G63290.2

Sequence Viewer

Length: 1212 bp
ATGGCAGAAACAGAGATTCTTGAGCCCTATCAACTGTCGTTCTCGGATCTTCTTTTGTCCTCTCGTAATCGCTCTCAATGGATCTCGAAAAATGTGATGGACGCTCTTGGCCCCACCGGTCCTGGTCTCCTTTGTATCACCGGCGTTCTTGGCTCCGCCTTTCTCCGCCGTAAACTCCTTCCTATGGCTCGGAAGCTGGCTCTGCTCGATCCGGACAAGCGGAAACTCATTCTCATGGAGCACCACTTGGGTAGCGACGTTCCTCTCAAGAATCCAGAACGAGATGTCTCCTCTTTTGCAATGCAGCTCAATTATGAAAGAACAACTTATAAATCCTCACTGGGAAAGCTGTGGTTCGATGAGGCTGGATCAAAACTGGACTTGCAGGAGGATGATGATGATGCTTTCACAAATCTTGGTGGTGCTTTTAAAGAACTCGGGTTCTGCATGAGGGAGTTGGGCTTGTCCATAGCTCGTCTATGCGACAGGGAGATTGGCGGAGGCTTGCTGGAGGAGAGCTTACTGGATTCTTGCACAGCCAAAGGACGTCTCATACATTACCACTCCGCTGCTGATAAATATGCTCTCAGAGAATCCCAGAGGAGAAACCAATCTGGTAACCGAGTATCAAGCAAGAGGAGAGTCCAGAACGCTGCTGAGCAAGAGCTGAACCGTAGAAATGGAGCTGGTTTGAGTGGGAGTCACTTCAATCTGTGGCAGCAGTGGCATTACGATTATGGCATCTTTACTGTTCTCACGGATCCTATGTTTCTATCGCCGTATTCCTATCAGGAATTCAGTTTGATGAGCAGCCATTCTTACCTGCAGATCTATCATCCCAGCAAGAACAAGTTCTACATGGTCAAGACTCCACAAGACAGTTTTTTGGTCCAAATCGGAGAATCTGCTGATATTTTGTCCAAAGGGAAGCTACGGTCGACCCTTCACTGTGTGTGCAAACCAGAGAAGCTGGATCACGTAAGCCGTGAGACATTTGTTGTCTTCTTGCACCCAAAGTGGAGCCAAACTTTCTCAGTCTCAGAATATACAATGGAACATCTAAGGTCGGATGAGGTCGTCCCTAGACCAGATTTACAGAATATTGTTCCACCTCTATCGTCTCGGTTAAGGGATGGGATGACTTTTGCCGAGTTTTCACGTGAAACGACAAAGCAGTACTACGGAGGGAATGGTTTGCAATCTAATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy

Protein Analysis

403

Amino Acids

45.88

Weight (kDa)

8.11

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63290 AT3G63290
fragaria_vesca FvH4_2g23081
malus_domestica MD03G1259400.v1.1
prunus_persica Prupe.8G235900_v2.0.a1
pyrus_communis pycom03g20740
rosa_chinensis RchiOBHm_Chr6g0290231
rosa_laevigata RLG00000012232
rosa_roxburghii Rroxscaffold_7G00177220
rosa_rugosa Rorug06G0211100
rosa_samantha Rh6AG321400 Rh6BG328500 Rh6CG334500 Rh6DG321500
rosa_wichuraiana Rw6G027760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 330
AatII GACGTC 1 cut(s) 550
Acc36I ACCTGC 1 cut(s) 831
AccI GTMKAC 1 cut(s) 938
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 5 cut(s) 156, 166, 220, 498, 567
AclWI GGATC 7 cut(s) 54, 89, 203, 376, 755, 768, 981
AcsI RAATTY 1 cut(s) 794
AcvI CACGTG 1 cut(s) 1160
AcyI GRCGYC 1 cut(s) 547
AdeI CACNNNGTG 1 cut(s) 952
AfaI GTAC 1 cut(s) 1178
AfiI CCNNNNNNNGG 1 cut(s) 184
AgeI ACCGGT 1 cut(s) 116
AgsI TTSAA 1 cut(s) 709
AjnI CCWGG 1 cut(s) 121
AluBI AGCT 9 cut(s) 196, 307, 349, 473, 519, 667, 686, 931, 970
AluI AGCT 9 cut(s) 196, 307, 349, 473, 519, 667, 686, 931, 970
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 6 cut(s) 131, 292, 554, 983, 1042, 1125
AlwI GGATC 7 cut(s) 54, 89, 203, 376, 755, 768, 981
Ama87I CYCGRG 1 cut(s) 437
Aor13HI TCCGGA 1 cut(s) 211
AoxI GGCC 1 cut(s) 109
ApeKI GCWGC 5 cut(s) 304, 569, 653, 718, 810
ApoI RAATTY 1 cut(s) 794
AsiGI ACCGGT 1 cut(s) 116
Asp700I GAANNNNTTC 1 cut(s) 851
AspS9I GGNCC 3 cut(s) 110, 119, 889
AsuHPI GGTGA 1 cut(s) 130
AvaI CYCGRG 1 cut(s) 437
AvaII GGWCC 2 cut(s) 119, 889
BamHI GGATCC 1 cut(s) 760
BanII GRGCYC 1 cut(s) 27
BbrPI CACGTG 1 cut(s) 1160
BbsI GAAGAC 1 cut(s) 994
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 5 cut(s) 316, 556, 640, 730, 822
BccI CCATC 2 cut(s) 91, 1127
BceAI ACGGC 3 cut(s) 153, 763, 969
BciT130I CCWGG 1 cut(s) 123
BcoDI GTCTC 6 cut(s) 131, 292, 554, 983, 1042, 1125
BfaI CTAG 1 cut(s) 1083
BfmI CTRYAG 1 cut(s) 824
BfuAI ACCTGC 1 cut(s) 831
BglII AGATCT 1 cut(s) 828
BisI GCNGC 5 cut(s) 305, 570, 654, 719, 811
BlpI GCTNAGC 1 cut(s) 657
BlsI GCNGC 5 cut(s) 306, 571, 655, 720, 812
BmcAI AGTACT 1 cut(s) 1178
Bme1390I CCNGG 1 cut(s) 123
Bme18I GGWCC 2 cut(s) 119, 889
BmeT110I CYCGRG 1 cut(s) 437
BmgT120I GGNCC 3 cut(s) 110, 119, 889
BmiI GGNNCC 4 cut(s) 112, 154, 762, 1022
BmrFI CCNGG 1 cut(s) 123
BmrI ACTGGG 1 cut(s) 350
BmsI GCATC 2 cut(s) 391, 750
BmuI ACTGGG 1 cut(s) 350
BpiI GAAGAC 1 cut(s) 994
BpmI CTGGAG 1 cut(s) 530
Bpu1102I GCTNAGC 1 cut(s) 657
BpuEI CTTGAG 2 cut(s) 41, 251
BsaAI YACGTR 2 cut(s) 979, 1160
BsaHI GRCGYC 1 cut(s) 547
BsaI GGTCTC 1 cut(s) 131
BsaWI WCCGGW 2 cut(s) 116, 211
Bsc4I CCNNNNNNNGG 1 cut(s) 184
Bse118I RCCGGY 2 cut(s) 116, 140
Bse1I ACTGG 3 cut(s) 345, 381, 528
Bse3DI GCAATG 1 cut(s) 306
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 1 cut(s) 123
BseGI GGATG 5 cut(s) 397, 835, 1075, 1138, 1143
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 4 cut(s) 601, 648, 1047, 1053
BseNI ACTGG 3 cut(s) 345, 381, 528
BseRI GAGGAG 4 cut(s) 280, 527, 616, 652
BseXI GCAGC 5 cut(s) 316, 556, 640, 730, 822
BseYI CCCAGC 1 cut(s) 839
Bsh1285I CGRYCG 1 cut(s) 938
BshFI GGCC 1 cut(s) 111
BshTI ACCGGT 1 cut(s) 116
BsiEI CGRYCG 1 cut(s) 938
BsiHKAI GWGCWC 1 cut(s) 243
BsiHKCI CYCGRG 1 cut(s) 437
BsiSI CCGG 3 cut(s) 117, 141, 212
BslFI GGGAC 1 cut(s) 1064
BslI CCNNNNNNNGG 1 cut(s) 184
BsmAI GTCTC 6 cut(s) 131, 292, 554, 983, 1042, 1125
BsmBI CGTCTC 2 cut(s) 554, 1125
BsmFI GGGAC 1 cut(s) 1064
BsnI GGCC 1 cut(s) 111
Bso31I GGTCTC 1 cut(s) 131
BsoBI CYCGRG 1 cut(s) 437
Bsp1286I GDGCHC 2 cut(s) 27, 243
Bsp13I TCCGGA 1 cut(s) 211
Bsp143I GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
Bsp1720I GCTNAGC 1 cut(s) 657
BspACI CCGC 5 cut(s) 156, 166, 220, 498, 567
BspANI GGCC 1 cut(s) 111
BspCNI CTCAG 4 cut(s) 600, 649, 1046, 1052
BspEI TCCGGA 1 cut(s) 211
BspLI GGNNCC 4 cut(s) 112, 154, 762, 1022
BspMAI CTGCAG 1 cut(s) 828
BspMI ACCTGC 1 cut(s) 831
BspPI GGATC 7 cut(s) 54, 89, 203, 376, 755, 768, 981
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 306
BsrFI RCCGGY 2 cut(s) 116, 140
BsrI ACTGG 3 cut(s) 345, 381, 528
BssAI RCCGGY 2 cut(s) 116, 140
BssMI GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
BssNI GRCGYC 1 cut(s) 547
Bst2UI CCWGG 1 cut(s) 123
Bst4CI ACNGT 6 cut(s) 36, 674, 751, 881, 936, 950
BstACI GRCGYC 1 cut(s) 547
BstBAI YACGTR 2 cut(s) 979, 1160
BstC8I GCNNGC 2 cut(s) 198, 506
BstDEI CTNAG 5 cut(s) 587, 657, 1033, 1039, 1061
BstEII GGTNACC 1 cut(s) 617
BstF5I GGATG 5 cut(s) 397, 835, 1075, 1138, 1143
BstKTI GATC 7 cut(s) 49, 84, 211, 371, 763, 831, 976
BstMAI GTCTC 6 cut(s) 131, 292, 554, 983, 1042, 1125
BstMBI GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
BstMCI CGRYCG 1 cut(s) 938
BstMWI GCNNNNNNNGC 3 cut(s) 150, 202, 724
BstNI CCWGG 1 cut(s) 123
BstPI GGTNACC 1 cut(s) 617
BstSCI CCNGG 1 cut(s) 121
BstSFI CTRYAG 1 cut(s) 824
BstV1I GCAGC 5 cut(s) 316, 556, 640, 730, 822
BstV2I GAAGAC 1 cut(s) 994
BstX2I RGATCY 4 cut(s) 46, 81, 760, 828
BstYI RGATCY 4 cut(s) 46, 81, 760, 828
BsuRI GGCC 1 cut(s) 111
BtsCI GGATG 5 cut(s) 397, 835, 1075, 1138, 1143
BtsI GCAGTG 1 cut(s) 728
BtsIMutI CAGTG 3 cut(s) 338, 728, 946
BveI ACCTGC 1 cut(s) 831
Cac8I GCNNGC 2 cut(s) 198, 506
Cfr10I RCCGGY 2 cut(s) 116, 140
Cfr13I GGNCC 3 cut(s) 110, 119, 889
CseI GACGC 1 cut(s) 110
Csp6I GTAC 1 cut(s) 1177
CspAI ACCGGT 1 cut(s) 116
CviAII CATG 3 cut(s) 235, 448, 859
CviQI GTAC 1 cut(s) 1177
DdeI CTNAG 5 cut(s) 587, 657, 1033, 1039, 1061
DpnI GATC 7 cut(s) 48, 83, 210, 370, 762, 830, 975
DpnII GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
DraI TTTAAA 1 cut(s) 430
DraIII CACNNNGTG 1 cut(s) 952
EciI GGCGGA 3 cut(s) 145, 155, 513
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 131
Eco47I GGWCC 2 cut(s) 119, 889
Eco72I CACGTG 1 cut(s) 1160
Eco88I CYCGRG 1 cut(s) 437
Eco91I GGTNACC 1 cut(s) 617
EcoO65I GGTNACC 1 cut(s) 617
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 1 cut(s) 121
EcoT38I GRGCYC 1 cut(s) 27
Esp3I CGTCTC 2 cut(s) 554, 1125
FaeI CATG 3 cut(s) 238, 451, 862
FalI AAGNNNNNCTT 2 cut(s) 310, 342
FaqI GGGAC 1 cut(s) 1064
FatI CATG 3 cut(s) 234, 447, 858
FblI GTMKAC 1 cut(s) 938
Fnu4HI GCNGC 5 cut(s) 305, 570, 654, 719, 811
FokI GGATG 5 cut(s) 404, 822, 1082, 1145, 1150
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 5 cut(s) 305, 570, 654, 719, 811
FspBI CTAG 1 cut(s) 1083
GluI GCNGC 5 cut(s) 305, 570, 654, 719, 811
GsaI CCCAGC 1 cut(s) 843
GsuI CTGGAG 1 cut(s) 530
HaeIII GGCC 1 cut(s) 111
HapII CCGG 3 cut(s) 117, 141, 212
HgaI GACGC 1 cut(s) 110
Hin1I GRCGYC 1 cut(s) 547
Hin1II CATG 3 cut(s) 238, 451, 862
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HinfI GANTC 8 cut(s) 16, 271, 527, 593, 642, 700, 868, 902
HpaII CCGG 3 cut(s) 117, 141, 212
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 2 cut(s) 173, 939
Hpy188I TCNGA 6 cut(s) 46, 192, 590, 899, 1042, 1069
Hpy188III TCNNGA 8 cut(s) 20, 85, 212, 268, 275, 646, 791, 865
Hpy8I GTNNAC 2 cut(s) 173, 939
Hpy99I CGWCG 1 cut(s) 260
HpyAV CCTTC 2 cut(s) 188, 953
HpyCH4III ACNGT 6 cut(s) 36, 674, 751, 881, 936, 950
HpyCH4IV ACGT 4 cut(s) 258, 547, 978, 1159
HpyCH4V TGCA 9 cut(s) 299, 304, 385, 447, 534, 826, 957, 1009, 1198
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 202, 724
HpyF3I CTNAG 5 cut(s) 587, 657, 1033, 1039, 1061
HpySE526I ACGT 4 cut(s) 258, 547, 978, 1159
Hsp92I GRCGYC 1 cut(s) 547
Hsp92II CATG 3 cut(s) 238, 451, 862
Kpn2I TCCGGA 1 cut(s) 211
Kzo9I GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
LmnI GCTCC 4 cut(s) 158, 238, 683, 1020
Lsp1109I GCAGC 5 cut(s) 316, 556, 640, 730, 822
LweI GCATC 2 cut(s) 391, 750
MaeI CTAG 1 cut(s) 1083
MaeII ACGT 4 cut(s) 258, 547, 978, 1159
MaeIII GTNAC 2 cut(s) 617, 701
MalI GATC 7 cut(s) 48, 83, 210, 370, 762, 830, 975
MboI GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
MboII GAAGA 2 cut(s) 41, 994
MflI RGATCY 4 cut(s) 46, 81, 760, 828
MhlI GDGCHC 2 cut(s) 27, 243
MluCI AATT 2 cut(s) 310, 794
MlyI GAGTC 3 cut(s) 651, 709, 862
MmeI TCCRAC 1 cut(s) 1047
MroI TCCGGA 1 cut(s) 211
MroXI GAANNNNTTC 1 cut(s) 851
MseI TTAA 2 cut(s) 429, 1127
MslI CAYNNNNRTG 1 cut(s) 233
MspA1I CMGCKG 1 cut(s) 569
MspI CCGG 3 cut(s) 117, 141, 212
MspR9I CCNGG 1 cut(s) 123
MvaI CCWGG 1 cut(s) 123
MwoI GCNNNNNNNGC 3 cut(s) 150, 202, 724
NdeII GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
NlaIII CATG 3 cut(s) 238, 451, 862
NlaIV GGNNCC 4 cut(s) 112, 154, 762, 1022
NmeAIII GCCGAG 1 cut(s) 1174
NmuCI GTSAC 1 cut(s) 701
PdmI GAANNNNTTC 1 cut(s) 851
PfeI GAWTC 5 cut(s) 16, 271, 527, 593, 902
PinAI ACCGGT 1 cut(s) 116
PkrI GCNGC 5 cut(s) 306, 571, 655, 720, 812
PleI GAGTC 3 cut(s) 650, 708, 862
PmaCI CACGTG 1 cut(s) 1160
PmlI CACGTG 1 cut(s) 1160
PpsI GAGTC 3 cut(s) 650, 708, 862
Ppu21I YACGTR 2 cut(s) 979, 1160
PsiI TTATAA 1 cut(s) 330
Psp6I CCWGG 1 cut(s) 121
PspCI CACGTG 1 cut(s) 1160
PspEI GGTNACC 1 cut(s) 617
PspFI CCCAGC 1 cut(s) 839
PspGI CCWGG 1 cut(s) 121
PspN4I GGNNCC 4 cut(s) 112, 154, 762, 1022
PspPI GGNCC 3 cut(s) 110, 119, 889
PsrI GAACNNNNNNTAC 2 cut(s) 839, 871
PstI CTGCAG 1 cut(s) 828
PsuI RGATCY 4 cut(s) 46, 81, 760, 828
RsaI GTAC 1 cut(s) 1178
RsaNI GTAC 1 cut(s) 1177
RseI CAYNNNNRTG 1 cut(s) 233
SalI GTCGAC 1 cut(s) 937
SaqAI TTAA 2 cut(s) 429, 1127
SatI GCNGC 5 cut(s) 305, 570, 654, 719, 811
Sau3AI GATC 7 cut(s) 46, 81, 208, 368, 760, 828, 973
Sau96I GGNCC 3 cut(s) 110, 119, 889
ScaI AGTACT 1 cut(s) 1178
SchI GAGTC 3 cut(s) 651, 709, 862
ScrFI CCNGG 1 cut(s) 123
SduI GDGCHC 2 cut(s) 27, 243
SfaNI GCATC 2 cut(s) 391, 750
SfcI CTRYAG 1 cut(s) 824
SgrAI CRCCGGYG 1 cut(s) 140
SinI GGWCC 2 cut(s) 119, 889
SmiMI CAYNNNNRTG 1 cut(s) 233
SmlI CTYRAG 2 cut(s) 20, 266
SmoI CTYRAG 2 cut(s) 20, 266
Sse9I AATT 2 cut(s) 310, 794
SsiI CCGC 5 cut(s) 156, 166, 220, 498, 567
SspI AATATT 1 cut(s) 1102
SspMI CTAG 1 cut(s) 1083
StyD4I CCNGG 1 cut(s) 121
TaaI ACNGT 6 cut(s) 36, 674, 751, 881, 936, 950
TaiI ACGT 4 cut(s) 261, 550, 981, 1162
TaqI TCGA 4 cut(s) 86, 207, 357, 938
TasI AATT 2 cut(s) 310, 794
TatI WGTACW 1 cut(s) 1176
TfiI GAWTC 5 cut(s) 16, 271, 527, 593, 902
Tru1I TTAA 2 cut(s) 429, 1127
Tru9I TTAA 2 cut(s) 429, 1127
TscAI CASTG 3 cut(s) 345, 728, 953
TseFI GTSAC 1 cut(s) 701
TseI GCWGC 5 cut(s) 304, 569, 653, 718, 810
Tsp45I GTSAC 1 cut(s) 701
TspDTI ATGAA 1 cut(s) 330
TspGWI ACGGA 2 cut(s) 773, 1197
TspRI CASTG 3 cut(s) 345, 728, 953
VpaK11BI GGWCC 2 cut(s) 119, 889
XapI RAATTY 1 cut(s) 794
XmiI GTMKAC 1 cut(s) 938
XmnI GAANNNNTTC 1 cut(s) 851
XspI CTAG 1 cut(s) 1083
ZraI GACGTC 1 cut(s) 548
ZrmI AGTACT 1 cut(s) 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.