Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016210

Physical Location & Seq

Genomic Coordinates Forward (+)

23401963 .. 23405991

Gene Structure 4029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G63370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGGAATACGCGGTAACTAACATGAGACTACTGAGTAACATGATGTACTCTGCTTCGGCGATTTCGTTTCCAAGGGTTCGTCTGCATTGTAGTATTCCGACAGAGCCATCCTGCCGGAGAAACCCATTCCGACAGAGCAATCAGCCCGTCCAAGTCCCTTCTCCGAAGCTCGCTTGTTTCGACGGAGTCCTAACTGAAGCTTTTCAACGGCTGGACGTCAGCGAAAACAACTCTCCAGTCGAAGCCTTTGCCTACGTTCTCGAGCTTTGTGGTAAACGTAGAGCTGTCTCACAAGGTCGGCAGCTGCATTCGCGCATTTTCAAGACTTTCCCCTCTTTCGAATTAGATTTTTTGGCCGGCAAGCTTGTTTTTATGTACGGTAAGTGCGGGTCTCTGGATGACGCAGAGAAAGTGTTTGACGAAATGCCTGACAGAACTGCCTTTGCGTGGAATACCATGATTGGAGCTTATGTTTCGAATGGTGAACCTGCTTCCGCTCTTGCTCTCTACTGGAATATGCGTGTGGAGGGCGTTCCTCTCGGTCTTTCCTCTTTTCCCGCCTTGCTTAAAGCCTGCGCCAAACTTAGAGATATCCGAAGTGGCTCTGAGCTTCATTCTCTCCTCGTTAAACTTGGCTACCATTCAACTGGTTTTATCGTCAATGCGTTGGTTTCCATGTATGCTAAGAACGATGACCTTAGCGCTGCAAGGCGTCTGTTTGACGGATTCCAAGAGAAAGGAGATGCTGTTCTCTGGAATTCTATTTTGTCTTCATATTCCACGTCTGGGAAATCTCTCGAGACTTTAGAATTATTCAGAGAAATGCACATGACTGGCCCTGCCCCCAACAGCTACACCATTGTTTCTGCTCTCACAGCCTGTGACGGTTTTTCATATGCAAAGCTAGGGAAAGAGATCCACGCTTCTGTCCTCAAATCATCAACTCACTCTTCTGAATTATATGTGTGCAACGCCTTGATTGCAATGTATACCAGGTGTGGTAAAATGCCTCAGGCAGAAAGGATCCTTCGTCAGATGAATAACGCTGATGTTGTCACATGGAATTCTCTGATTAAGGGATATGTACAGAATCTCATGTACAAGGAGGCTTTAGAGTTCTTTTCTGATATGATCGCTGCTGGCCACAAATCCGACGAGGTTTCAATGACCAGCATCATTGCAGCGTCAGGAAGATTAAGCAATCTCTTGGCAGGAATGGAATTGCACGCTTACGTGATTAAACATGGCTGGGATTCTAATTTGCAGGTTGGGAATACGTTGATTGATATGTATTCAAAGTGCAACCTCACATGTTACATGGGCCGTGCGTTTCTTAGGATGCATGACAAAGATCTTATTTCATGGACTACGGTCATTGCCGGTTATGCCCAGAATGATTGTCATGTAGAGGCCTTAGAACTCTTCCGGGATGTTGCTAAGAAAAGGATGGAGATTGATGAAATGATCCTGGGAAGCATCCTTCGAGCTTCTAGTGTACTGAAATCCATGCTCATTGTCAAAGAAATCCATTGTCACATTTTGAGAAAAGGTTTACTTGATACTGTGATACAGAATGAGTTGGTAGATGTCTACGGAAAATGCAGGAACATGGGCTATGCTACTCGAGTATTTGAATCAATTAAAGGTAAAGATGTTGTCTCTTGGACAAGCATGATTTCGTCTAGTGCTCTTAATGGTAATGAAAGCGAGGCTGTTGAACTCTTTCGACGCATGGTTGAAACTGGTTTGTCAGCTGATTCTGTAGCATTGTTGTGTATACTGTCAGCTGCAGCAAGTTTATCTGCACTCAATAAAGGGAGAGAAATTCATTGCTACTTACTCCGAAAGGGGTTTTGCCTAGAGGGGTCCATTGCAGTTGCAGTTGTTGACATGTATGCATGCTGTGGAGATTTACAGAGTGCAAAGGCTGTATTTGACCGGATAGAAAGGAAAGGTTTGCTGCAATACACAAGTATGATCAATGCATATGGAATGCATGGCTGCGGAAAAGCAGCTGTTGAGTTGTTCGATAAAATGAGGCACGAAAACGTCTCGCCCGATCACATTTCATTTCTGGCACTTCTTTATGCGTGCAGCCATGCAGGTCTGCTTGACGAGGGTAGAGGGTTTCTCAAGATCATGGAACATGAGTATGAATTGGAACCATGGCCTGAACATTACGTGTGTCTGGTTGACATGCTGGGTCGTGCAAATTGTGTAGTGGAAGCCTTTGAATTCGTTAAAATGATGAAAACAGAACCGACTGCAGAAGTCTGGTGTGCACTCCTTGCGGCATGCCGATCTCACTCAGAGAAAGAAATTGGAGAGATTGCTGCTCAGAGGCTCCTTGAGCTAGAACCTAAGAATCCGGGAAATCTTGTGCTTGTATCTAATGTCTTTGCTGAACAAGGAAGATGGAACGATGTAGAAAAAGTGAGGGCAAAAATGAAAGCAAGTGGAATGGAGAAACACCCTGGATGTAGTTGGATTGAGATGGACGGCAAGGTTCATAAATTTACAGCCAGAGACAAGTCTCACCCAGAGAGCAAAGAGATATATGAGAAATTGTCCGAGGTTACTAGGAAGTTGGAGAGGGAAGTAGGTTATGTAGCCGATACAAAGTTCGTTCTGCATAATGTAGATGAAGGGGAGAAGGTTCAGATGCTGCATGGACATAGTGAGAGGATAGCGATTGCTTATGGTCTGCTCAGAACACCTGACCGAGCCTGTCTACGGATCACAAAAAATTTACGTGTCTGTAGAGATTGCCATACTTTTTGTAAGCTGGTCTCTAAATTATTCAGACGAGACATTGTGATGAGGGATGCCAATAGATTTCATCATTTTGAAAGTGGACTGTGTTCTTGCGGAGATTCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

960

Amino Acids

107.52

Weight (kDa)

7.31

Isoelectric Point (pI)

42.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	147 - 194	3.4e-06	PPR repeat family
PPR_2	PF13041	248 - 294	2.1e-06	PPR repeat family
PPR_2	PF13041	350 - 394	2.9e-10	PPR repeat family
PPR	PF01535	352 - 381	9.1e-08	PPR repeat
PPR	PF01535	656 - 683	4.1e-06	PPR repeat
PPR_2	PF13041	656 - 699	5.8e-08	PPR repeat family
E_motif	PF20431	769 - 831	2.6e-33	E motif
Eplus_motif	PF20430	836 - 863	5.2e-14	E+ motif
DYW_deaminase	PF14432	868 - 960	3.1e-46	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63370 AT3G63370
fragaria_vesca	FvH4_2g22910
malus_domestica	MD11G1278400.v1.1
prunus_persica	Prupe.8G234400_v2.0.a1
pyrus_communis	pycom11g24590
rosa_chinensis	RchiOBHm_Chr6g0289871
rosa_laevigata	RLG00000012263
rosa_multiflora	Rmu_ssc0000314.1_g000006
rosa_rugosa	Rorug06G0207400
rosa_samantha	Rh6AG319000 Rh6BG326000 Rh6CG331900 Rh6DG317400
rosa_wichuraiana	Rw6G027510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	219
Acc36I	ACCTGC	3 cut(s)	496, 1255, 2093
AccBSI	CCGCTC	1 cut(s)	497
AccI	GTMKAC	4 cut(s)	989, 1590, 1777, 2731
AccII	CGCG	2 cut(s)	11, 313
AciI	CCGC	7 cut(s)	11, 387, 495, 558, 2004, 2291, 2868
AclWI	GGATC	5 cut(s)	910, 1018, 1031, 1459, 2744
AcoI	YGGCCR	2 cut(s)	354, 1141
AcsI	RAATTY	6 cut(s)	757, 1063, 1824, 2234, 2513, 2746
AcuI	CTGAAG	1 cut(s)	216
AcyI	GRCGYC	2 cut(s)	216, 712
AfaI	GTAC	5 cut(s)	47, 377, 1086, 1100, 1497
AfeI	AGCGCT	1 cut(s)	703
AfiI	CCNNNNNNNGG	3 cut(s)	447, 786, 2733
AflIII	ACRYGT	4 cut(s)	1310, 1890, 2181, 2752
AjiI	CACGTC	1 cut(s)	783
AjnI	CCWGG	3 cut(s)	992, 1467, 2473
AloI	GAACNNNNNNTCC	2 cut(s)	732, 764
Alw21I	GWGCWC	2 cut(s)	1690, 2284
Alw44I	GTGCAC	1 cut(s)	2280
AlwI	GGATC	5 cut(s)	910, 1018, 1031, 1459, 2744
AlwNI	CAGNNNCTG	1 cut(s)	2665
Ama87I	CYCGRG	3 cut(s)	260, 797, 1623
Aor51HI	AGCGCT	1 cut(s)	703
AoxI	GGCC	6 cut(s)	354, 835, 1141, 1321, 1410, 2168
ApaLI	GTGCAC	1 cut(s)	2280
ApoI	RAATTY	6 cut(s)	757, 1063, 1824, 2234, 2513, 2746
Asp700I	GAANNNNTTC	2 cut(s)	201, 1722
AspLEI	GCGC	3 cut(s)	315, 578, 704
AspS9I	GGNCC	3 cut(s)	836, 1321, 1866
AsuC2I	CCSGG	2 cut(s)	1427, 2370
AsuHPI	GGTGA	2 cut(s)	494, 2528
AsuII	TTCGAA	2 cut(s)	339, 476
AvaI	CYCGRG	3 cut(s)	260, 797, 1623
AvaII	GGWCC	1 cut(s)	1866
AxyI	CCTNAGG	1 cut(s)	1011
BaeGI	GKGCMC	1 cut(s)	2284
BalI	TGGCCA	1 cut(s)	1143
BamHI	GGATCC	1 cut(s)	1023
BbsI	GAAGAC	1 cut(s)	762
Bbv12I	GWGCWC	2 cut(s)	1690, 2284
BccI	CCATC	4 cut(s)	115, 1441, 2409, 2488
BceAI	ACGGC	3 cut(s)	224, 1308, 2515
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	3 cut(s)	994, 1469, 2475
BclI	TGATCA	1 cut(s)	1977
BcnI	CCSGG	2 cut(s)	1427, 2370
BfaI	CTAG	6 cut(s)	905, 1491, 1683, 1859, 2354, 2580
BfmI	CTRYAG	4 cut(s)	1761, 1788, 2265, 2758
BfoI	RGCGCY	1 cut(s)	705
BfuAI	ACCTGC	3 cut(s)	496, 1255, 2093
BglII	AGATCT	1 cut(s)	1351
Bme1390I	CCNGG	5 cut(s)	994, 1427, 1469, 2370, 2475
Bme18I	GGWCC	1 cut(s)	1866
BmeT110I	CYCGRG	3 cut(s)	260, 797, 1623
BmgBI	CACGTC	1 cut(s)	783
BmgT120I	GGNCC	3 cut(s)	836, 1321, 1866
BmiI	GGNNCC	4 cut(s)	1025, 1867, 2163, 2345
BmrFI	CCNGG	5 cut(s)	994, 1427, 1469, 2370, 2475
BmsI	GCATC	6 cut(s)	733, 1182, 1329, 1485, 2652, 2815
BoxI	GACNNNNGTC	1 cut(s)	1370
BpiI	GAAGAC	1 cut(s)	762
BplI	GAGNNNNNCTC	2 cut(s)	2115, 2147
BpmI	CTGGAG	1 cut(s)	219
Bpu10I	CCTNAGC	1 cut(s)	698
Bpu14I	TTCGAA	2 cut(s)	339, 476
BpuEI	CTTGAG	2 cut(s)	2117, 2369
BpuMI	CCSGG	2 cut(s)	1427, 2370
BsaAI	YACGTR	3 cut(s)	1234, 2182, 2753
BsaHI	GRCGYC	2 cut(s)	216, 712
BsaI	GGTCTC	2 cut(s)	396, 2794
BsaJI	CCNNGG	5 cut(s)	71, 1468, 2165, 2473, 2571
BsaWI	WCCGGW	1 cut(s)	1938
BsaXI	ACNNNNNCTCC	4 cut(s)	456, 486, 732, 762
Bsc4I	CCNNNNNNNGG	3 cut(s)	447, 786, 2733
Bse118I	RCCGGY	2 cut(s)	356, 1379
Bse1I	ACTGG	5 cut(s)	236, 515, 652, 838, 1747
Bse21I	CCTNAGG	1 cut(s)	1011
Bse3DI	GCAATG	5 cut(s)	990, 1176, 1374, 1828, 1869
BseBI	CCWGG	3 cut(s)	994, 1469, 2475
BseDI	CCNNGG	5 cut(s)	71, 1468, 2165, 2473, 2571
BseGI	GGATG	8 cut(s)	107, 403, 1344, 1435, 1452, 1476, 2483, 2830
BseLI	CCNNNNNNNGG	3 cut(s)	447, 786, 2733
BseMI	GCAATG	5 cut(s)	990, 1176, 1374, 1828, 1869
BseMII	CTCAG	6 cut(s)	23, 597, 1025, 2322, 2351, 2722
BseNI	ACTGG	5 cut(s)	236, 515, 652, 838, 1747
BseRI	GAGGAG	1 cut(s)	611
BseSI	GKGCMC	1 cut(s)	2284
BseYI	CCCAGC	2 cut(s)	1248, 2200
BsgI	GTGCAG	2 cut(s)	1788, 2113
Bsh1236I	CGCG	2 cut(s)	11, 313
BshFI	GGCC	6 cut(s)	356, 837, 1143, 1323, 1412, 2170
BsiHKAI	GWGCWC	2 cut(s)	1690, 2284
BsiHKCI	CYCGRG	3 cut(s)	260, 797, 1623
BsiSI	CCGG	6 cut(s)	115, 357, 1380, 1426, 1939, 2369
BslFI	GGGAC	1 cut(s)	140
BslI	CCNNNNNNNGG	3 cut(s)	447, 786, 2733
BsmBI	CGTCTC	1 cut(s)	2056
BsmFI	GGGAC	1 cut(s)	140
BsmI	GAATGC	2 cut(s)	307, 1998
BsnI	GGCC	6 cut(s)	356, 837, 1143, 1323, 1412, 2170
Bso31I	GGTCTC	2 cut(s)	396, 2794
BsoBI	CYCGRG	3 cut(s)	260, 797, 1623
Bsp119I	TTCGAA	2 cut(s)	339, 476
Bsp1286I	GDGCHC	2 cut(s)	1690, 2284
Bsp1407I	TGTACA	2 cut(s)	1084, 1098
Bsp19I	CCATGG	1 cut(s)	2165
BspACI	CCGC	7 cut(s)	11, 387, 495, 558, 2004, 2291, 2868
BspANI	GGCC	6 cut(s)	356, 837, 1143, 1323, 1412, 2170
BspCNI	CTCAG	6 cut(s)	24, 598, 1024, 2321, 2350, 2721
BspFNI	CGCG	2 cut(s)	11, 313
BspLI	GGNNCC	4 cut(s)	1025, 1867, 2163, 2345
BspMAI	CTGCAG	2 cut(s)	1792, 2269
BspMI	ACCTGC	3 cut(s)	496, 1255, 2093
BspPI	GGATC	5 cut(s)	910, 1018, 1031, 1459, 2744
BspT104I	TTCGAA	2 cut(s)	339, 476
BspTNI	GGTCTC	2 cut(s)	396, 2794
BsrBI	CCGCTC	1 cut(s)	497
BsrDI	GCAATG	5 cut(s)	990, 1176, 1374, 1828, 1869
BsrFI	RCCGGY	2 cut(s)	356, 1379
BsrGI	TGTACA	2 cut(s)	1084, 1098
BsrI	ACTGG	5 cut(s)	236, 515, 652, 838, 1747
BssAI	RCCGGY	2 cut(s)	356, 1379
BssECI	CCNNGG	5 cut(s)	71, 1468, 2165, 2473, 2571
BssNAI	GTATAC	2 cut(s)	990, 1778
BssNI	GRCGYC	2 cut(s)	216, 712
BssT1I	CCWWGG	2 cut(s)	71, 2165
Bst1107I	GTATAC	2 cut(s)	990, 1778
Bst2UI	CCWGG	3 cut(s)	994, 1469, 2475
Bst4CI	ACNGT	6 cut(s)	380, 887, 1372, 1564, 1782, 2859
Bst6I	CTCTTC	2 cut(s)	955, 1427
BstACI	GRCGYC	2 cut(s)	216, 712
BstAPI	GCANNNNNTGC	1 cut(s)	2288
BstAUI	TGTACA	2 cut(s)	1084, 1098
BstBAI	YACGTR	3 cut(s)	1234, 2182, 2753
BstBI	TTCGAA	2 cut(s)	339, 476
BstC8I	GCNNGC	9 cut(s)	171, 358, 362, 574, 1141, 1227, 1900, 2092, 2296
BstDSI	CCRYGG	1 cut(s)	2165
BstF5I	GGATG	8 cut(s)	107, 403, 1344, 1435, 1452, 1476, 2483, 2830
BstFNI	CGCG	2 cut(s)	11, 313
BstH2I	RGCGCY	1 cut(s)	705
BstHHI	GCGC	3 cut(s)	315, 578, 704
BstMWI	GCNNNNNNNGC	6 cut(s)	310, 875, 980, 1385, 2288, 2350
BstNI	CCWGG	3 cut(s)	994, 1469, 2475
BstNSI	RCATGY	5 cut(s)	1314, 1894, 1902, 2200, 2298
BstPAI	GACNNNNGTC	1 cut(s)	1370
BstSCI	CCNGG	5 cut(s)	992, 1425, 1467, 2368, 2473
BstSFI	CTRYAG	4 cut(s)	1761, 1788, 2265, 2758
BstSLI	GKGCMC	1 cut(s)	2284
BstUI	CGCG	2 cut(s)	11, 313
BstV2I	GAAGAC	1 cut(s)	762
BstX2I	RGATCY	3 cut(s)	915, 1023, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	647
BstYI	RGATCY	3 cut(s)	915, 1023, 1351
BstZ17I	GTATAC	2 cut(s)	990, 1778
Bsu36I	CCTNAGG	1 cut(s)	1011
BsuRI	GGCC	6 cut(s)	356, 837, 1143, 1323, 1412, 2170
BtgI	CCRYGG	1 cut(s)	2165
BtrI	CACGTC	1 cut(s)	783
BtsCI	GGATG	8 cut(s)	107, 403, 1344, 1435, 1452, 1476, 2483, 2830
BveI	ACCTGC	3 cut(s)	496, 1255, 2093
Cac8I	GCNNGC	9 cut(s)	171, 358, 362, 574, 1141, 1227, 1900, 2092, 2296
CaiI	CAGNNNCTG	1 cut(s)	2665
CfoI	GCGC	3 cut(s)	315, 578, 704
Cfr10I	RCCGGY	2 cut(s)	356, 1379
Cfr13I	GGNCC	3 cut(s)	836, 1321, 1866
CseI	GACGC	4 cut(s)	410, 701, 1173, 1737
CsiI	ACCWGGT	1 cut(s)	992
Csp6I	GTAC	5 cut(s)	46, 376, 1085, 1099, 1496
CviQI	GTAC	5 cut(s)	46, 376, 1085, 1099, 1496
EaeI	YGGCCR	2 cut(s)	354, 1141
Eam1104I	CTCTTC	2 cut(s)	955, 1427
EarI	CTCTTC	2 cut(s)	955, 1427
Eco130I	CCWWGG	2 cut(s)	71, 2165
Eco147I	AGGCCT	1 cut(s)	1412
Eco31I	GGTCTC	2 cut(s)	396, 2794
Eco32I	GATATC	1 cut(s)	592
Eco47I	GGWCC	1 cut(s)	1866
Eco47III	AGCGCT	1 cut(s)	703
Eco57I	CTGAAG	1 cut(s)	216
Eco81I	CCTNAGG	1 cut(s)	1011
Eco88I	CYCGRG	3 cut(s)	260, 797, 1623
EcoRI	GAATTC	3 cut(s)	757, 1063, 2234
EcoRII	CCWGG	3 cut(s)	992, 1467, 2473
EcoRV	GATATC	1 cut(s)	592
EcoT14I	CCWWGG	2 cut(s)	71, 2165
EcoT22I	ATGCAT	4 cut(s)	1344, 1900, 1987, 1998
ErhI	CCWWGG	2 cut(s)	71, 2165
Esp3I	CGTCTC	1 cut(s)	2056
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FaqI	GGGAC	1 cut(s)	140
FauI	CCCGC	2 cut(s)	380, 565
FauNDI	CATATG	2 cut(s)	895, 1987
FbaI	TGATCA	1 cut(s)	1977
FblI	GTMKAC	4 cut(s)	989, 1590, 1777, 2731
FokI	GGATG	8 cut(s)	94, 410, 1351, 1442, 1459, 1463, 2490, 2837
FspBI	CTAG	6 cut(s)	905, 1491, 1683, 1859, 2354, 2580
GlaI	GCGC	3 cut(s)	314, 577, 703
GsaI	CCCAGC	2 cut(s)	1252, 2204
GsuI	CTGGAG	1 cut(s)	219
HaeII	RGCGCY	1 cut(s)	705
HaeIII	GGCC	6 cut(s)	356, 837, 1143, 1323, 1412, 2170
HapII	CCGG	6 cut(s)	115, 357, 1380, 1426, 1939, 2369
HgaI	GACGC	4 cut(s)	410, 701, 1173, 1737
HhaI	GCGC	3 cut(s)	315, 578, 704
Hin1I	GRCGYC	2 cut(s)	216, 712
Hin6I	GCGC	3 cut(s)	313, 576, 702
HinP1I	GCGC	3 cut(s)	313, 576, 702
HincII	GTYRAC	2 cut(s)	1888, 2194
HindII	GTYRAC	2 cut(s)	1888, 2194
HindIII	AAGCTT	2 cut(s)	198, 362
HinfI	GANTC	8 cut(s)	186, 726, 1090, 1253, 1634, 1757, 2365, 2873
HpaII	CCGG	6 cut(s)	115, 357, 1380, 1426, 1939, 2369
HphI	GGTGA	2 cut(s)	494, 2528
Hpy188III	TCNNGA	8 cut(s)	260, 322, 395, 754, 797, 799, 1188, 2134
Hpy99I	CGWCG	3 cut(s)	185, 1157, 1731
HpyAV	CCTTC	5 cut(s)	168, 1037, 1490, 2639, 2647
HpyCH4III	ACNGT	6 cut(s)	380, 887, 1372, 1564, 1782, 2859
HpyCH4IV	ACGT	9 cut(s)	216, 255, 277, 782, 1233, 1277, 2049, 2181, 2752
HpyF10VI	GCNNNNNNNGC	6 cut(s)	310, 875, 980, 1385, 2288, 2350
HpySE526I	ACGT	9 cut(s)	216, 255, 277, 782, 1233, 1277, 2049, 2181, 2752
Hsp92I	GRCGYC	2 cut(s)	216, 712
HspAI	GCGC	3 cut(s)	313, 576, 702
KroI	GCCGGC	1 cut(s)	356
KroNI	GCCGGC	1 cut(s)	358
Ksp22I	TGATCA	1 cut(s)	1977
LmnI	GCTCC	2 cut(s)	464, 2349
LweI	GCATC	6 cut(s)	733, 1182, 1329, 1485, 2652, 2815
MabI	ACCWGGT	1 cut(s)	992
MaeI	CTAG	6 cut(s)	905, 1491, 1683, 1859, 2354, 2580
MaeII	ACGT	9 cut(s)	216, 255, 277, 782, 1233, 1277, 2049, 2181, 2752
MaeIII	GTNAC	7 cut(s)	13, 35, 881, 1054, 1313, 1532, 2575
MbiI	CCGCTC	1 cut(s)	497
MboII	GAAGA	5 cut(s)	762, 942, 1203, 1414, 2424
MflI	RGATCY	3 cut(s)	915, 1023, 1351
MhlI	GDGCHC	2 cut(s)	1690, 2284
MlsI	TGGCCA	1 cut(s)	1143
MluNI	TGGCCA	1 cut(s)	1143
MlyI	GAGTC	1 cut(s)	195
MmeI	TCCRAC	5 cut(s)	122, 154, 1176, 2465, 2568
Mox20I	TGGCCA	1 cut(s)	1143
Mph1103I	ATGCAT	4 cut(s)	1344, 1900, 1987, 1998
MroNI	GCCGGC	1 cut(s)	356
MroXI	GAANNNNTTC	2 cut(s)	201, 1722
MscI	TGGCCA	1 cut(s)	1143
MseI	TTAA	8 cut(s)	567, 627, 1074, 1196, 1239, 1641, 1692, 2241
MslI	CAYNNNNRTG	4 cut(s)	1771, 1973, 2151, 2816
Msp20I	TGGCCA	1 cut(s)	1143
MspA1I	CMGCKG	4 cut(s)	304, 1754, 1787, 2015
MspI	CCGG	6 cut(s)	115, 357, 1380, 1426, 1939, 2369
MspR9I	CCNGG	5 cut(s)	994, 1427, 1469, 2370, 2475
Mva1269I	GAATGC	2 cut(s)	307, 1998
MvaI	CCWGG	3 cut(s)	994, 1469, 2475
MvnI	CGCG	2 cut(s)	11, 313
MwoI	GCNNNNNNNGC	6 cut(s)	310, 875, 980, 1385, 2288, 2350
NaeI	GCCGGC	1 cut(s)	358
NciI	CCSGG	2 cut(s)	1427, 2370
NcoI	CCATGG	1 cut(s)	2165
NdeI	CATATG	2 cut(s)	895, 1987
NgoMIV	GCCGGC	1 cut(s)	356
NlaIV	GGNNCC	4 cut(s)	1025, 1867, 2163, 2345
NmuCI	GTSAC	3 cut(s)	881, 1054, 1532
NsiI	ATGCAT	4 cut(s)	1344, 1900, 1987, 1998
NspI	RCATGY	5 cut(s)	1314, 1894, 1902, 2200, 2298
NspV	TTCGAA	2 cut(s)	339, 476
PaeI	GCATGC	2 cut(s)	1902, 2298
PaeR7I	CTCGAG	3 cut(s)	260, 797, 1623
PceI	AGGCCT	1 cut(s)	1412
PciI	ACATGT	2 cut(s)	1310, 1890
PcsI	WCGNNNNNNNCGW	3 cut(s)	62, 177, 2055
PctI	GAATGC	2 cut(s)	307, 1998
PdiI	GCCGGC	1 cut(s)	358
PdmI	GAANNNNTTC	2 cut(s)	201, 1722
PfeI	GAWTC	7 cut(s)	726, 1090, 1253, 1634, 1757, 2365, 2873
PflFI	GACNNNGTC	1 cut(s)	185
PfoI	TCCNGGA	2 cut(s)	1425, 2368
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
Ppu21I	YACGTR	3 cut(s)	1234, 2182, 2753
PscI	ACATGT	2 cut(s)	1310, 1890
PshAI	GACNNNNGTC	1 cut(s)	1370
Psp6I	CCWGG	3 cut(s)	992, 1467, 2473
PspFI	CCCAGC	2 cut(s)	1248, 2200
PspGI	CCWGG	3 cut(s)	992, 1467, 2473
PspN4I	GGNNCC	4 cut(s)	1025, 1867, 2163, 2345
PspPI	GGNCC	3 cut(s)	836, 1321, 1866
PspXI	VCTCGAGB	1 cut(s)	1623
PstI	CTGCAG	2 cut(s)	1792, 2269
PstNI	CAGNNNCTG	1 cut(s)	2665
PsuI	RGATCY	3 cut(s)	915, 1023, 1351
PsyI	GACNNNGTC	1 cut(s)	185
PvuII	CAGCTG	4 cut(s)	304, 1754, 1787, 2015
RsaI	GTAC	5 cut(s)	47, 377, 1086, 1100, 1497
RsaNI	GTAC	5 cut(s)	46, 376, 1085, 1099, 1496
RseI	CAYNNNNRTG	4 cut(s)	1771, 1973, 2151, 2816
SaqAI	TTAA	8 cut(s)	567, 627, 1074, 1196, 1239, 1641, 1692, 2241
Sau96I	GGNCC	3 cut(s)	836, 1321, 1866
SchI	GAGTC	1 cut(s)	195
ScrFI	CCNGG	5 cut(s)	994, 1427, 1469, 2370, 2475
SduI	GDGCHC	2 cut(s)	1690, 2284
SexAI	ACCWGGT	1 cut(s)	992
SfaNI	GCATC	6 cut(s)	733, 1182, 1329, 1485, 2652, 2815
SfcI	CTRYAG	4 cut(s)	1761, 1788, 2265, 2758
Sfr274I	CTCGAG	3 cut(s)	260, 797, 1623
SfuI	TTCGAA	2 cut(s)	339, 476
SinI	GGWCC	1 cut(s)	1866
SlaI	CTCGAG	3 cut(s)	260, 797, 1623
SmiMI	CAYNNNNRTG	4 cut(s)	1771, 1973, 2151, 2816
SmlI	CTYRAG	5 cut(s)	260, 797, 1623, 2132, 2348
SmoI	CTYRAG	5 cut(s)	260, 797, 1623, 2132, 2348
SphI	GCATGC	2 cut(s)	1902, 2298
SseBI	AGGCCT	1 cut(s)	1412
SsiI	CCGC	7 cut(s)	11, 387, 495, 558, 2004, 2291, 2868
SspMI	CTAG	6 cut(s)	905, 1491, 1683, 1859, 2354, 2580
StuI	AGGCCT	1 cut(s)	1412
StyD4I	CCNGG	5 cut(s)	992, 1425, 1467, 2368, 2473
StyI	CCWWGG	2 cut(s)	71, 2165
TaaI	ACNGT	6 cut(s)	380, 887, 1372, 1564, 1782, 2859
TaiI	ACGT	9 cut(s)	219, 258, 280, 785, 1236, 1280, 2052, 2184, 2755
TaqII	GACCGA	2 cut(s)	530, 2736
TatI	WGTACW	4 cut(s)	45, 1084, 1098, 1495
TauI	GCSGC	1 cut(s)	2294
TfiI	GAWTC	7 cut(s)	726, 1090, 1253, 1634, 1757, 2365, 2873
Tru1I	TTAA	8 cut(s)	567, 627, 1074, 1196, 1239, 1641, 1692, 2241
Tru9I	TTAA	8 cut(s)	567, 627, 1074, 1196, 1239, 1641, 1692, 2241
TseFI	GTSAC	3 cut(s)	881, 1054, 1532
Tsp45I	GTSAC	3 cut(s)	881, 1054, 1532
TspGWI	ACGGA	4 cut(s)	198, 738, 1608, 2749
Tth111I	GACNNNGTC	1 cut(s)	185
VneI	GTGCAC	1 cut(s)	2280
VpaK11BI	GGWCC	1 cut(s)	1866
XapI	RAATTY	6 cut(s)	757, 1063, 1824, 2234, 2513, 2746
XceI	RCATGY	5 cut(s)	1314, 1894, 1902, 2200, 2298
XhoI	CTCGAG	3 cut(s)	260, 797, 1623
XmiI	GTMKAC	4 cut(s)	989, 1590, 1777, 2731
XmnI	GAANNNNTTC	2 cut(s)	201, 1722
XspI	CTAG	6 cut(s)	905, 1491, 1683, 1859, 2354, 2580
ZraI	GACGTC	1 cut(s)	217
Zsp2I	ATGCAT	4 cut(s)	1344, 1900, 1987, 1998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.