Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0016210

Physical Location & Seq

Genomic Coordinates Reverse (-)

20763700 .. 20767449

Gene Structure 3750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G234400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2934 bp

ATGTGCTTACAGTATTGTCCCGCGCAGCGCTTGCGTTTTCCATGCACGTCCTCTGTGATGGCTGCTTCAGCCCAACACTGTTACTTCACTTCTTCGGCCGTACAAGTCCACCCCGTCCCTATGTTGAAGAAAGCTCAGGCAACCCGAGCTCTCCAATTCTTCAAAGTTTCTCAAAACCCCATTAAATTACCTTCCTTGAAGGAAGTTTGCGACCAAGGAAGCCTCAAGGAAGCTTTTCAGTCACTGGGCAGTTTGCTCAAACTTCAAAATTCATCACTTAAGCTTTCTCTAGATGGGGCTTATTCTCCTGTCCTTGAGCTCTGTGCGAACAAGAAAGCTCTGTCAGAAGGGCAACAAGTTCATGCCCATATGATAAAATCTTGTGATTTATATGATTCTGTGTTTCTCAGTACTAAGCTTGTATTTATGTACGGGAAATGTTGCTCCCTTTTGAACGCGGAGAAGGTGTTTGGTAGAATGTGCCATAGAACCATTTTTACTTGGAACGCAATGATTGGTGCTTATGCTTCAAATGGGAAACCTTTAAAAGCTCTTGAGCTGTATAGGGACATGCGGGTTTTGGAGGTTCCTCTTGATTCTTGTACTTTCCCTTGTATACTGAAAGCATGTGTTGCGCTTAATAATGTCTGCTCTGGGACAGAAATTCATGGTGTGGCTATCAAATACGGGTATAATAAGGTAACATTTGTTGACAACTCACTAGCTTCTATGTATGCAAGCTGCAATGATCTTGATGGGGCGAGGAAGTTATTTGATGGCATGAAAGAAAAAGAGGATATTGTGTCCTGGAATTCTATTATTTCAGCATATTCAGCGAATGGGCAATCTGTTGAAGCATTGGAACTATTTCGAGAAATGCAAAGGATGTGTCTTACGCCAAACACATATACTTTTGTCGCTGCTCTTCAAGCCTGTGAGGACTCTTTTTCTGATAAACTTGGTATGGAGATCCATGCTGCTGTTATGAAATCGGGTCACTGCTTAGATATTTACGTGGCAAATTCTTTGCTTGCTATGTACCTAAGATGCGGTAAAACGGACGAGGCTGCCATAATCTTTAATGATCTGGATGCCAAGGATATTGTCTCATGGAATACCATGCTCTCTGGTTTTGCCCAAAATGGTCTATATAATGAAACTCTGCAGTTGTTCTATGATATGCAGAGTACTGATGAAAAACCTGACCTGGTTTCATTAATAAATATCCTTGCAGCATCTGGTCGATTAGGATATCTATTGTCTGGAATGGAAGTTCATGCTTATGCGATAAAAAATGGATTCGATTCTGATTTGCAGCTCGGGAACACACTGATAGATATGTATGCTAGGTGTGGTTGTGTGAACTTCATGGGCCATGCTTTTGAAAAGATGCCAAACATAGACTTCATTTCTTGGACAACTATTATTGCTGGCTACGCTCAGAACAATTGTCACACGAGGGCCTTAGAATTGTGCCGGAAGGTGCAGGCGGTAGGGCTGGATGTTGATGCAATGATGGTGGAAAGTATTTTACTGGCTTGTGGTGCATTGAAATGTGTTTCTTTGGTAAAAGAAATACATGGTTACACTATGAGGAGAGGTTTATTCGATCTTGTCTTACAAAATGCAGTTGTCAACGTATATGGAGAGTGTGGATACATAGAATATGCAAACCGGATGTTCGAATTGATTGAATCCAAAGATGTTGTGTCTTGGACGAGCATGATATCTTGCAATGTTCATAGTGGGCTTGCAAATGAGGCCCTTGAGCTCTGTCACCTCATGAAAGAAACAAACGTTGAACCTGATTCTATAGCACTTGTTAGCATACTATCAGCTGTTGCTGGCTTATCTGCTTTGAAGAAAGGGAAAGAAATTCATGGTTTTCTTCTTAGGAAGGGCTTCATCTTAGAAGGATCTCTTGGTAGCTCGCTAGTGGATATGTATGCCCGCTCTGGAACTTTGGAGAATGCATACAAGGTATATAACTGTATTAGAAATAAAAGTCTAATTTTATGGACCACCATGATTAATGCGTATGGAATGCATGGTAATGGCAAGGCAGCTATTGATTTATTCAAGAAGATGGAAGGTGAAAGAATTGTTCCTGATCATATTACATTTCTGGCTCTTCTATATGGCTGCAGTCATTCGGGCTTGATTGATGAGGGTAAAAGAATATATGAAATCATGAGATCTGAATATCAATTATTGCCATGGGCAGAACATTCTGCCTGCATGGTTGATCTTCTTAGTCGTGCTAATCGCTTGGAAGAGGCATACCATTTTGTGAACGGCATGCAGAGTGAACCTACTGCTGAAGTATGGTGTGCTCTCCTTGGTGCTTGCCGGGTTCATTCTAACAAAGAATTAGGAGAAATTGCAGCAAAGAAGATCTTAGAGTTGGGCACGGAGAATCCAGGAAATTATGTGCTTGTATCAAATATGTTTGCTGCTAGCAGAAGATGGAAAGATGTAGAAGAAGTGAGGATGAGAATGAAGGGAATTGGGTTGAAGAAAAATCCGGGATGTAGTTGGATTGAGATTGGAAACAAGGTTCATATATTCACAGCAAGGGACAAATCTCATCCTCAGTCCAATGAGATTTACCAAAAATTAGCTCAAATGACTGAGAAGTTGGAGAGAGAAGTAGACTATGTGGCTCAAACCAAATATGTTTTGCACAATGTGGAGGAAGAAGAGAAAGTTCAGATGCTTTATGGACATAGTGAAAGGCTGGCCATTGCATATGGTCTGCTTAAACCTCCTGAGGGAACCCCTATCCGAATCACAAAGAACCTTCGGGTTTGTGGCGATTGCCATCATTTCATTAAACTAGTTTCAAAAGTTTTTAGGCAAGTGCTTGTTGTGAGGGATGCCAATAGATTTCATCATTTTGAGGATGGGATTTGTTCTTGTGGCGATTTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

978

Amino Acids

109.09

Weight (kDa)

6.75

Isoelectric Point (pI)

37.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63370 AT3G63370
fragaria_vesca	FvH4_2g22910
malus_domestica	MD11G1278400.v1.1
prunus_persica	Prupe.8G234400_v2.0.a1
pyrus_communis	pycom11g24590
rosa_chinensis	RchiOBHm_Chr6g0289871
rosa_laevigata	RLG00000012263
rosa_multiflora	Rmu_ssc0000314.1_g000006
rosa_rugosa	Rorug06G0207400
rosa_samantha	Rh6AG319000 Rh6BG326000 Rh6CG331900 Rh6DG317400
rosa_wichuraiana	Rw6G027510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1953
AccI	GTMKAC	2 cut(s)	616, 2652
AccII	CGCG	2 cut(s)	23, 458
AciI	CCGC	6 cut(s)	21, 458, 574, 1050, 1490, 1951
AclI	AACGTT	1 cut(s)	1797
AclWI	GGATC	2 cut(s)	964, 1924
AcoI	YGGCCR	2 cut(s)	96, 2739
AcsI	RAATTY	5 cut(s)	268, 663, 811, 1021, 1875
AcuI	CTGAAG	2 cut(s)	51, 2340
AdeI	CACNNNGTG	1 cut(s)	2689
AfaI	GTAC	6 cut(s)	102, 412, 431, 604, 1040, 1189
AfeI	AGCGCT	1 cut(s)	29
AfiI	CCNNNNNNNGG	1 cut(s)	2771
AflII	CTTAAG	1 cut(s)	278
AhlI	ACTAGT	1 cut(s)	2836
AjiI	CACGTC	1 cut(s)	48
AjnI	CCWGG	3 cut(s)	806, 1206, 2419
AjuI	GAANNNNNNNTTGG	2 cut(s)	1905, 1937
AloI	GAACNNNNNNTCC	4 cut(s)	1257, 1289, 2541, 2573
Alw21I	GWGCWC	4 cut(s)	151, 321, 1773, 2335
Alw26I	GTCTC	1 cut(s)	1111
AlwI	GGATC	2 cut(s)	964, 1924
AlwNI	CAGNNNCTG	2 cut(s)	244, 1238
Ama87I	CYCGRG	2 cut(s)	144, 1319
Aor51HI	AGCGCT	1 cut(s)	29
AoxI	GGCC	5 cut(s)	96, 1372, 1461, 1761, 2739
ApoI	RAATTY	5 cut(s)	268, 663, 811, 1021, 1875
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AseI	ATTAAT	2 cut(s)	1217, 2031
Asp700I	GAANNNNTTC	3 cut(s)	234, 867, 1901
AspLEI	GCGC	3 cut(s)	25, 30, 637
AspS9I	GGNCC	4 cut(s)	1372, 1461, 1762, 2019
AsuC2I	CCSGG	2 cut(s)	2351, 2526
AsuHPI	GGTGA	2 cut(s)	1769, 2105
AsuII	TTCGAA	1 cut(s)	1683
AsuNHI	GCTAGC	1 cut(s)	2456
AvaI	CYCGRG	2 cut(s)	144, 1319
AvaII	GGWCC	1 cut(s)	2019
AxyI	CCTNAGG	1 cut(s)	2769
BaeGI	GKGCMC	1 cut(s)	2411
BalI	TGGCCA	1 cut(s)	2741
BanII	GRGCYC	3 cut(s)	151, 321, 1773
BauI	CACGAG	1 cut(s)	1456
Bbv12I	GWGCWC	4 cut(s)	151, 321, 1773, 2335
BccI	CCATC	9 cut(s)	52, 287, 749, 770, 1510, 2080, 2460, 2829, 2897
BceAI	ACGGC	2 cut(s)	83, 2311
BciT130I	CCWGG	3 cut(s)	808, 1208, 2421
BciVI	GTATCC	1 cut(s)	1649
BclI	TGATCA	1 cut(s)	2110
BcnI	CCSGG	2 cut(s)	2351, 2526
BcoDI	GTCTC	1 cut(s)	1111
BcuI	ACTAGT	1 cut(s)	2836
BfaI	CTAG	6 cut(s)	290, 722, 1347, 1934, 2457, 2837
BfmI	CTRYAG	3 cut(s)	1163, 1812, 2143
BfoI	RGCGCY	1 cut(s)	31
BfrI	CTTAAG	1 cut(s)	278
BfuI	GTATCC	1 cut(s)	1649
BglII	AGATCT	2 cut(s)	2195, 2394
BmcAI	AGTACT	2 cut(s)	412, 1189
Bme1390I	CCNGG	5 cut(s)	808, 1208, 2351, 2421, 2526
Bme18I	GGWCC	1 cut(s)	2019
BmeT110I	CYCGRG	2 cut(s)	144, 1319
BmgBI	CACGTC	1 cut(s)	48
BmgT120I	GGNCC	4 cut(s)	1372, 1461, 1762, 2019
BmiI	GGNNCC	2 cut(s)	588, 2776
BmrFI	CCNGG	5 cut(s)	808, 1208, 2351, 2421, 2526
BmrI	ACTGGG	1 cut(s)	254
BmsI	GCATC	7 cut(s)	1037, 1081, 1244, 1380, 1498, 2703, 2866
BmtI	GCTAGC	1 cut(s)	2460
BmuI	ACTGGG	1 cut(s)	254
Bpu10I	CCTNAGC	1 cut(s)	135
Bpu14I	TTCGAA	1 cut(s)	1683
BpuEI	CTTGAG	4 cut(s)	209, 335, 575, 1787
BpuMI	CCSGG	2 cut(s)	2351, 2526
BsaAI	YACGTR	1 cut(s)	1015
BsaBI	GATNNNNATC	1 cut(s)	2820
BsaJI	CCNNGG	4 cut(s)	214, 1095, 2216, 2338
BsaWI	WCCGGW	1 cut(s)	1674
BsaXI	ACNNNNNCTCC	2 cut(s)	452, 482
Bsc4I	CCNNNNNNNGG	1 cut(s)	2771
Bse1I	ACTGG	2 cut(s)	249, 1539
Bse21I	CCTNAGG	1 cut(s)	2769
Bse3DI	GCAATG	5 cut(s)	516, 751, 1518, 1741, 2742
Bse8I	GATNNNNATC	1 cut(s)	2820
BseBI	CCWGG	3 cut(s)	808, 1208, 2421
BseDI	CCNNGG	4 cut(s)	214, 1095, 2216, 2338
BseGI	GGATG	9 cut(s)	891, 1096, 1507, 1683, 2496, 2534, 2587, 2881, 2908
BseJI	GATNNNNATC	1 cut(s)	2820
BseLI	CCNNNNNNNGG	1 cut(s)	2771
BseMI	GCAATG	5 cut(s)	516, 751, 1518, 1741, 2742
BseMII	CTCAG	6 cut(s)	149, 421, 1454, 2606, 2622, 2760
BseNI	ACTGG	2 cut(s)	249, 1539
BseRI	GAGGAG	1 cut(s)	1609
BseSI	GKGCMC	1 cut(s)	2411
BseX3I	CGGCCG	1 cut(s)	96
BsgI	GTGCAG	1 cut(s)	1505
Bsh1236I	CGCG	2 cut(s)	23, 458
Bsh1285I	CGRYCG	1 cut(s)	99
BshFI	GGCC	5 cut(s)	98, 1374, 1463, 1763, 2741
BsiEI	CGRYCG	1 cut(s)	99
BsiHKAI	GWGCWC	4 cut(s)	151, 321, 1773, 2335
BsiHKCI	CYCGRG	2 cut(s)	144, 1319
BsiSI	CCGG	4 cut(s)	1477, 1675, 2350, 2525
BslFI	GGGAC	5 cut(s)	3, 101, 581, 670, 2591
BslI	CCNNNNNNNGG	1 cut(s)	2771
BsmAI	GTCTC	1 cut(s)	1111
BsmFI	GGGAC	5 cut(s)	3, 101, 581, 670, 2591
BsmI	GAATGC	2 cut(s)	1975, 2049
BsnI	GGCC	5 cut(s)	98, 1374, 1463, 1763, 2741
BsoBI	CYCGRG	2 cut(s)	144, 1319
Bsp119I	TTCGAA	1 cut(s)	1683
Bsp1286I	GDGCHC	5 cut(s)	151, 321, 1773, 2335, 2411
Bsp143I	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
Bsp19I	CCATGG	1 cut(s)	2216
BspACI	CCGC	6 cut(s)	21, 458, 574, 1050, 1490, 1951
BspANI	GGCC	5 cut(s)	98, 1374, 1463, 1763, 2741
BspCNI	CTCAG	6 cut(s)	148, 420, 1453, 2605, 2623, 2761
BspFNI	CGCG	2 cut(s)	23, 458
BspHI	TCATGA	2 cut(s)	1782, 2190
BspLI	GGNNCC	2 cut(s)	588, 2776
BspMAI	CTGCAG	2 cut(s)	1167, 2147
BspOI	GCTAGC	1 cut(s)	2460
BspPI	GGATC	2 cut(s)	964, 1924
BspQI	GCTCTTC	2 cut(s)	930, 2136
BspT104I	TTCGAA	1 cut(s)	1683
BspTI	CTTAAG	1 cut(s)	278
BsrBI	CCGCTC	1 cut(s)	1953
BsrDI	GCAATG	5 cut(s)	516, 751, 1518, 1741, 2742
BsrI	ACTGG	2 cut(s)	249, 1539
BssECI	CCNNGG	4 cut(s)	214, 1095, 2216, 2338
BssMI	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
BssNAI	GTATAC	1 cut(s)	617
BssSI	CACGAG	1 cut(s)	1456
BssT1I	CCWWGG	4 cut(s)	214, 1095, 2216, 2338
Bst1107I	GTATAC	1 cut(s)	617
Bst2BI	CACGAG	1 cut(s)	1456
Bst2UI	CCWGG	3 cut(s)	808, 1208, 2421
Bst4CI	ACNGT	3 cut(s)	12, 80, 1991
Bst6I	CTCTTC	4 cut(s)	930, 2136, 2268, 2694
BstAFI	CTTAAG	1 cut(s)	278
BstAPI	GCANNNNNTGC	2 cut(s)	31, 632
BstBAI	YACGTR	1 cut(s)	1015
BstBI	TTCGAA	1 cut(s)	1683
BstDSI	CCRYGG	1 cut(s)	2216
BstF5I	GGATG	9 cut(s)	891, 1096, 1507, 1683, 2496, 2534, 2587, 2881, 2908
BstFNI	CGCG	2 cut(s)	23, 458
BstH2I	RGCGCY	1 cut(s)	31
BstHHI	GCGC	3 cut(s)	25, 30, 637
BstKTI	GATC	9 cut(s)	751, 972, 1087, 1612, 1919, 2113, 2198, 2248, 2397
BstMAI	GTCTC	1 cut(s)	1111
BstMBI	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
BstMCI	CGRYCG	1 cut(s)	99
BstMWI	GCNNNNNNNGC	9 cut(s)	31, 68, 146, 632, 833, 929, 1436, 1544, 1760
BstNI	CCWGG	3 cut(s)	808, 1208, 2421
BstNSI	RCATGY	3 cut(s)	574, 630, 2302
BstSCI	CCNGG	5 cut(s)	806, 1206, 2349, 2419, 2524
BstSFI	CTRYAG	3 cut(s)	1163, 1812, 2143
BstSLI	GKGCMC	1 cut(s)	2411
BstUI	CGCG	2 cut(s)	23, 458
BstX2I	RGATCY	4 cut(s)	969, 1916, 2195, 2394
BstYI	RGATCY	4 cut(s)	969, 1916, 2195, 2394
BstZ17I	GTATAC	1 cut(s)	617
BstZI	CGGCCG	1 cut(s)	96
Bsu36I	CCTNAGG	1 cut(s)	2769
BsuI	GTATCC	1 cut(s)	1649
BsuRI	GGCC	5 cut(s)	98, 1374, 1463, 1763, 2741
BtgI	CCRYGG	1 cut(s)	2216
BtrI	CACGTC	1 cut(s)	48
BtsCI	GGATG	9 cut(s)	891, 1096, 1507, 1683, 2496, 2534, 2587, 2881, 2908
BtsI	GCAGTG	1 cut(s)	997
BtsIMutI	CAGTG	4 cut(s)	76, 242, 997, 1328
CaiI	CAGNNNCTG	2 cut(s)	244, 1238
CciI	TCATGA	2 cut(s)	1782, 2190
CfoI	GCGC	3 cut(s)	25, 30, 637
Cfr13I	GGNCC	4 cut(s)	1372, 1461, 1762, 2019
CsiI	ACCWGGT	1 cut(s)	1206
Csp6I	GTAC	6 cut(s)	101, 411, 430, 603, 1039, 1188
CspCI	CAANNNNNGTGG	2 cut(s)	1500, 1535
CviQI	GTAC	6 cut(s)	101, 411, 430, 603, 1039, 1188
DpnI	GATC	9 cut(s)	750, 971, 1086, 1611, 1918, 2112, 2197, 2247, 2396
DpnII	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
DraI	TTTAAA	1 cut(s)	546
DraIII	CACNNNGTG	1 cut(s)	2689
EaeI	YGGCCR	2 cut(s)	96, 2739
EagI	CGGCCG	1 cut(s)	96
Eam1104I	CTCTTC	4 cut(s)	930, 2136, 2268, 2694
EarI	CTCTTC	4 cut(s)	930, 2136, 2268, 2694
Ecl136II	GAGCTC	3 cut(s)	149, 319, 1771
EclXI	CGGCCG	1 cut(s)	96
Eco130I	CCWWGG	4 cut(s)	214, 1095, 2216, 2338
Eco24I	GRGCYC	3 cut(s)	151, 321, 1773
Eco32I	GATATC	2 cut(s)	1253, 1728
Eco47I	GGWCC	1 cut(s)	2019
Eco47III	AGCGCT	1 cut(s)	29
Eco52I	CGGCCG	1 cut(s)	96
Eco53kI	GAGCTC	3 cut(s)	149, 319, 1771
Eco57I	CTGAAG	2 cut(s)	51, 2340
Eco81I	CCTNAGG	1 cut(s)	2769
Eco88I	CYCGRG	2 cut(s)	144, 1319
EcoICRI	GAGCTC	3 cut(s)	149, 319, 1771
EcoO109I	RGGNCCY	2 cut(s)	1461, 1762
EcoRI	GAATTC	1 cut(s)	811
EcoRII	CCWGG	3 cut(s)	806, 1206, 2419
EcoRV	GATATC	2 cut(s)	1253, 1728
EcoT14I	CCWWGG	4 cut(s)	214, 1095, 2216, 2338
EcoT22I	ATGCAT	2 cut(s)	1975, 2049
EcoT38I	GRGCYC	3 cut(s)	151, 321, 1773
ErhI	CCWWGG	4 cut(s)	214, 1095, 2216, 2338
FalI	AAGNNNNNCTT	4 cut(s)	1905, 1937, 2381, 2413
FaqI	GGGAC	5 cut(s)	3, 101, 581, 670, 2591
FauI	CCCGC	3 cut(s)	28, 567, 1958
FauNDI	CATATG	2 cut(s)	369, 2749
FbaI	TGATCA	1 cut(s)	2110
FblI	GTMKAC	2 cut(s)	616, 2652
FokI	GGATG	9 cut(s)	898, 1103, 1514, 1690, 2503, 2541, 2574, 2888, 2915
FriOI	GRGCYC	3 cut(s)	151, 321, 1773
FspBI	CTAG	6 cut(s)	290, 722, 1347, 1934, 2457, 2837
GlaI	GCGC	3 cut(s)	24, 29, 636
HaeII	RGCGCY	1 cut(s)	31
HaeIII	GGCC	5 cut(s)	98, 1374, 1463, 1763, 2741
HapII	CCGG	4 cut(s)	1477, 1675, 2350, 2525
HhaI	GCGC	3 cut(s)	25, 30, 637
Hin6I	GCGC	3 cut(s)	23, 28, 635
HinP1I	GCGC	3 cut(s)	23, 28, 635
HincII	GTYRAC	2 cut(s)	712, 1636
HindII	GTYRAC	2 cut(s)	712, 1636
HindIII	AAGCTT	3 cut(s)	231, 281, 416
HinfI	GANTC	9 cut(s)	395, 596, 941, 1299, 1304, 1694, 1808, 2416, 2787
HpaII	CCGG	4 cut(s)	1477, 1675, 2350, 2525
HphI	GGTGA	2 cut(s)	1769, 2105
Hpy166II	GTNNAC	8 cut(s)	109, 617, 712, 1363, 1636, 2293, 2309, 2653
Hpy188I	TCNGA	7 cut(s)	346, 952, 1309, 1443, 2200, 2712, 2786
Hpy8I	GTNNAC	8 cut(s)	109, 617, 712, 1363, 1636, 2293, 2309, 2653
HpyCH4III	ACNGT	3 cut(s)	12, 80, 1991
HpyCH4IV	ACGT	4 cut(s)	47, 1014, 1638, 1797
HpyF10VI	GCNNNNNNNGC	9 cut(s)	31, 68, 146, 632, 833, 929, 1436, 1544, 1760
HpySE526I	ACGT	4 cut(s)	47, 1014, 1638, 1797
HspAI	GCGC	3 cut(s)	23, 28, 635
Ksp22I	TGATCA	1 cut(s)	2110
Kzo9I	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
LguI	GCTCTTC	2 cut(s)	930, 2136
LmnI	GCTCC	1 cut(s)	449
LweI	GCATC	7 cut(s)	1037, 1081, 1244, 1380, 1498, 2703, 2866
MabI	ACCWGGT	1 cut(s)	1206
MaeI	CTAG	6 cut(s)	290, 722, 1347, 1934, 2457, 2837
MaeII	ACGT	4 cut(s)	47, 1014, 1638, 1797
MaeIII	GTNAC	7 cut(s)	80, 240, 700, 995, 1451, 1583, 1775
MalI	GATC	9 cut(s)	750, 971, 1086, 1611, 1918, 2112, 2197, 2247, 2396
MbiI	CCGCTC	1 cut(s)	1953
MboI	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
MfeI	CAATTG	1 cut(s)	1447
MflI	RGATCY	4 cut(s)	969, 1916, 2195, 2394
MhlI	GDGCHC	5 cut(s)	151, 321, 1773, 2335, 2411
MlsI	TGGCCA	1 cut(s)	2741
MluNI	TGGCCA	1 cut(s)	2741
MlyI	GAGTC	1 cut(s)	935
MmeI	TCCRAC	2 cut(s)	2516, 2619
Mox20I	TGGCCA	1 cut(s)	2741
Mph1103I	ATGCAT	2 cut(s)	1975, 2049
MroXI	GAANNNNTTC	3 cut(s)	234, 867, 1901
MscI	TGGCCA	1 cut(s)	2741
MseI	TTAA	9 cut(s)	183, 279, 545, 639, 1080, 1217, 2031, 2760, 2832
MslI	CAYNNNNRTG	3 cut(s)	1281, 1552, 2052
Msp20I	TGGCCA	1 cut(s)	2741
MspA1I	CMGCKG	1 cut(s)	1838
MspCI	CTTAAG	1 cut(s)	278
MspI	CCGG	4 cut(s)	1477, 1675, 2350, 2525
MspR9I	CCNGG	5 cut(s)	808, 1208, 2351, 2421, 2526
MteI	GCGCNGCGC	1 cut(s)	26
MunI	CAATTG	1 cut(s)	1447
Mva1269I	GAATGC	2 cut(s)	1975, 2049
MvaI	CCWGG	3 cut(s)	808, 1208, 2421
MvnI	CGCG	2 cut(s)	23, 458
MwoI	GCNNNNNNNGC	9 cut(s)	31, 68, 146, 632, 833, 929, 1436, 1544, 1760
NciI	CCSGG	2 cut(s)	2351, 2526
NcoI	CCATGG	1 cut(s)	2216
NdeI	CATATG	2 cut(s)	369, 2749
NdeII	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
NheI	GCTAGC	1 cut(s)	2456
NlaIV	GGNNCC	2 cut(s)	588, 2776
NmuCI	GTSAC	4 cut(s)	240, 995, 1451, 1775
NsiI	ATGCAT	2 cut(s)	1975, 2049
NspI	RCATGY	3 cut(s)	574, 630, 2302
NspV	TTCGAA	1 cut(s)	1683
PaeI	GCATGC	1 cut(s)	2302
PagI	TCATGA	2 cut(s)	1782, 2190
PciSI	GCTCTTC	2 cut(s)	930, 2136
PctI	GAATGC	2 cut(s)	1975, 2049
PdmI	GAANNNNTTC	3 cut(s)	234, 867, 1901
PfeI	GAWTC	8 cut(s)	395, 596, 1299, 1304, 1694, 1808, 2416, 2787
PfoI	TCCNGGA	3 cut(s)	806, 2419, 2524
PleI	GAGTC	1 cut(s)	935
PpsI	GAGTC	1 cut(s)	935
Ppu21I	YACGTR	1 cut(s)	1015
PshBI	ATTAAT	2 cut(s)	1217, 2031
Psp124BI	GAGCTC	3 cut(s)	151, 321, 1773
Psp1406I	AACGTT	1 cut(s)	1797
Psp6I	CCWGG	3 cut(s)	806, 1206, 2419
PspGI	CCWGG	3 cut(s)	806, 1206, 2419
PspN4I	GGNNCC	2 cut(s)	588, 2776
PspPI	GGNCC	4 cut(s)	1372, 1461, 1762, 2019
PsrI	GAACNNNNNNTAC	2 cut(s)	481, 513
PstI	CTGCAG	2 cut(s)	1167, 2147
PstNI	CAGNNNCTG	2 cut(s)	244, 1238
PsuI	RGATCY	4 cut(s)	969, 1916, 2195, 2394
PvuII	CAGCTG	1 cut(s)	1838
RsaI	GTAC	6 cut(s)	102, 412, 431, 604, 1040, 1189
RsaNI	GTAC	6 cut(s)	101, 411, 430, 603, 1039, 1188
RseI	CAYNNNNRTG	3 cut(s)	1281, 1552, 2052
SacI	GAGCTC	3 cut(s)	151, 321, 1773
SapI	GCTCTTC	2 cut(s)	930, 2136
SaqAI	TTAA	9 cut(s)	183, 279, 545, 639, 1080, 1217, 2031, 2760, 2832
Sau3AI	GATC	9 cut(s)	748, 969, 1084, 1609, 1916, 2110, 2195, 2245, 2394
Sau96I	GGNCC	4 cut(s)	1372, 1461, 1762, 2019
ScaI	AGTACT	2 cut(s)	412, 1189
SchI	GAGTC	1 cut(s)	935
ScrFI	CCNGG	5 cut(s)	808, 1208, 2351, 2421, 2526
SduI	GDGCHC	5 cut(s)	151, 321, 1773, 2335, 2411
SexAI	ACCWGGT	1 cut(s)	1206
SfaNI	GCATC	7 cut(s)	1037, 1081, 1244, 1380, 1498, 2703, 2866
SfcI	CTRYAG	3 cut(s)	1163, 1812, 2143
SfuI	TTCGAA	1 cut(s)	1683
SinI	GGWCC	1 cut(s)	2019
SmiMI	CAYNNNNRTG	3 cut(s)	1281, 1552, 2052
SmlI	CTYRAG	5 cut(s)	224, 278, 314, 554, 1766
SmoI	CTYRAG	5 cut(s)	224, 278, 314, 554, 1766
SpeI	ACTAGT	1 cut(s)	2836
SphI	GCATGC	1 cut(s)	2302
SsiI	CCGC	6 cut(s)	21, 458, 574, 1050, 1490, 1951
SspMI	CTAG	6 cut(s)	290, 722, 1347, 1934, 2457, 2837
SstI	GAGCTC	3 cut(s)	151, 321, 1773
StyD4I	CCNGG	5 cut(s)	806, 1206, 2349, 2419, 2524
StyI	CCWWGG	4 cut(s)	214, 1095, 2216, 2338
TaaI	ACNGT	3 cut(s)	12, 80, 1991
TaiI	ACGT	4 cut(s)	50, 1017, 1641, 1800
TaqI	TCGA	5 cut(s)	871, 1243, 1302, 1608, 1683
TatI	WGTACW	3 cut(s)	410, 602, 1187
TfiI	GAWTC	8 cut(s)	395, 596, 1299, 1304, 1694, 1808, 2416, 2787
Tru1I	TTAA	9 cut(s)	183, 279, 545, 639, 1080, 1217, 2031, 2760, 2832
Tru9I	TTAA	9 cut(s)	183, 279, 545, 639, 1080, 1217, 2031, 2760, 2832
TscAI	CASTG	4 cut(s)	83, 249, 1004, 1335
TseFI	GTSAC	4 cut(s)	240, 995, 1451, 1775
Tsp45I	GTSAC	4 cut(s)	240, 995, 1451, 1775
TspGWI	ACGGA	2 cut(s)	1073, 2426
TspRI	CASTG	4 cut(s)	83, 249, 1004, 1335
Vha464I	CTTAAG	1 cut(s)	278
VpaK11BI	GGWCC	1 cut(s)	2019
VspI	ATTAAT	2 cut(s)	1217, 2031
XapI	RAATTY	5 cut(s)	268, 663, 811, 1021, 1875
XbaI	TCTAGA	1 cut(s)	289
XceI	RCATGY	3 cut(s)	574, 630, 2302
XmiI	GTMKAC	2 cut(s)	616, 2652
XmnI	GAANNNNTTC	3 cut(s)	234, 867, 1901
XspI	CTAG	6 cut(s)	290, 722, 1347, 1934, 2457, 2837
ZrmI	AGTACT	2 cut(s)	412, 1189
Zsp2I	ATGCAT	2 cut(s)	1975, 2049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.