mediator of RNA polymerase II transcription subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04920 AT4G04920 AT4G04920 |
| fragaria_vesca | FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 |
| malus_domestica | MD01G1005800.v1.1 MD05G1316200.v1.1 MD10G1296700.v1.1 |
| prunus_persica | Prupe.4G043900_v2.0.a1 Prupe.4G043900_v2.0.a1 |
| pyrus_communis | pycom05g29330 pycom10g24950 |
| rosa_chinensis | RchiOBHm_Chr5g0008021 |
| rosa_laevigata | RLG00000031528 |
| rosa_multiflora | Rmu_sc0007348.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00068450 |
| rosa_rugosa | Rorug04G0432600 |
| rosa_samantha | Rh5AG060700 Rh5BG057500 Rh5CG067600 Rh5DG056700 |
| rosa_wichuraiana | Rw5G005990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 974 |
| AarI | CACCTGC | 1 cut(s) | 2827 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 133 |
| Acc16I | TGCGCA | 2 cut(s) | 1924, 3192 |
| Acc36I | ACCTGC | 1 cut(s) | 2827 |
| AccB1I | GGYRCC | 3 cut(s) | 986, 3035, 3734 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 740, 1323, 1364, 2762 |
| AccBSI | CCGCTC | 1 cut(s) | 2002 |
| AccI | GTMKAC | 2 cut(s) | 137, 189 |
| AccII | CGCG | 2 cut(s) | 1966, 3653 |
| AccIII | TCCGGA | 2 cut(s) | 2374, 3503 |
| AcoI | YGGCCR | 1 cut(s) | 3542 |
| AcsI | RAATTY | 5 cut(s) | 773, 858, 1522, 3073, 3403 |
| AcuI | CTGAAG | 1 cut(s) | 319 |
| AcyI | GRCGYC | 2 cut(s) | 664, 3018 |
| AdeI | CACNNNGTG | 2 cut(s) | 2078, 3734 |
| AfaI | GTAC | 9 cut(s) | 745, 916, 1160, 1406, 1458, 1491, 3049, 3085, 3686 |
| AfeI | AGCGCT | 1 cut(s) | 1463 |
| AflII | CTTAAG | 1 cut(s) | 275 |
| AflIII | ACRYGT | 3 cut(s) | 1407, 2462, 2680 |
| AgeI | ACCGGT | 1 cut(s) | 1258 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2749, 2781, 3279, 3311 |
| AleI | CACNNNNGTG | 1 cut(s) | 904 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3613, 3645 |
| Alw21I | GWGCWC | 2 cut(s) | 630, 791 |
| Alw26I | GTCTC | 5 cut(s) | 119, 380, 537, 1416, 2348 |
| Alw44I | GTGCAC | 1 cut(s) | 626 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1295, 3431 |
| Ama87I | CYCGRG | 2 cut(s) | 3275, 3419 |
| Aor13HI | TCCGGA | 2 cut(s) | 2374, 3503 |
| Aor51HI | AGCGCT | 1 cut(s) | 1463 |
| AoxI | GGCC | 7 cut(s) | 809, 875, 941, 1054, 2176, 2703, 3542 |
| ApaLI | GTGCAC | 1 cut(s) | 626 |
| ApoI | RAATTY | 5 cut(s) | 773, 858, 1522, 3073, 3403 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 740, 772, 3169, 3201 |
| AsiGI | ACCGGT | 1 cut(s) | 1258 |
| AsiSI | GCGATCGC | 1 cut(s) | 2010 |
| AspLEI | GCGC | 4 cut(s) | 462, 1464, 1925, 3193 |
| AsuC2I | CCSGG | 3 cut(s) | 3032, 3420, 3421 |
| AsuHPI | GGTGA | 9 cut(s) | 1057, 1248, 1673, 1766, 1806, 1863, 2760, 3148, 3720 |
| AvaI | CYCGRG | 2 cut(s) | 3275, 3419 |
| AvaII | GGWCC | 8 cut(s) | 867, 1433, 1537, 1625, 1802, 3299, 3416, 3823 |
| AxyI | CCTNAGG | 3 cut(s) | 2586, 3432, 3704 |
| BaeGI | GKGCMC | 2 cut(s) | 630, 3040 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3039, 3072 |
| BalI | TGGCCA | 1 cut(s) | 3544 |
| BamHI | GGATCC | 1 cut(s) | 2735 |
| BanI | GGYRCC | 3 cut(s) | 986, 3035, 3734 |
| BanII | GRGCYC | 1 cut(s) | 791 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 90, 122 |
| BauI | CACGAG | 3 cut(s) | 504, 549, 1362 |
| BbsI | GAAGAC | 3 cut(s) | 210, 2889, 3341 |
| Bbv12I | GWGCWC | 2 cut(s) | 630, 791 |
| BccI | CCATC | 7 cut(s) | 1120, 2084, 2342, 2726, 3088, 3248, 3509 |
| BceAI | ACGGC | 1 cut(s) | 312 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 374, 408 |
| BciVI | GTATCC | 3 cut(s) | 426, 1570, 3512 |
| BclI | TGATCA | 1 cut(s) | 1984 |
| BcnI | CCSGG | 3 cut(s) | 3032, 3420, 3421 |
| BcoDI | GTCTC | 5 cut(s) | 119, 380, 537, 1416, 2348 |
| BfaI | CTAG | 1 cut(s) | 2186 |
| BfmI | CTRYAG | 7 cut(s) | 78, 255, 1092, 1296, 1308, 1617, 2082 |
| BfoI | RGCGCY | 2 cut(s) | 463, 1465 |
| BfrI | CTTAAG | 1 cut(s) | 275 |
| BfuAI | ACCTGC | 1 cut(s) | 2827 |
| BfuI | GTATCC | 3 cut(s) | 426, 1570, 3512 |
| BglII | AGATCT | 1 cut(s) | 3481 |
| BlpI | GCTNAGC | 1 cut(s) | 799 |
| Bme18I | GGWCC | 8 cut(s) | 867, 1433, 1537, 1625, 1802, 3299, 3416, 3823 |
| BmeT110I | CYCGRG | 2 cut(s) | 3275, 3419 |
| BmrI | ACTGGG | 2 cut(s) | 865, 3034 |
| BmuI | ACTGGG | 2 cut(s) | 865, 3034 |
| BpiI | GAAGAC | 3 cut(s) | 210, 2889, 3341 |
| BpmI | CTGGAG | 6 cut(s) | 57, 1055, 1471, 2650, 2873, 3072 |
| Bpu10I | CCTNAGC | 2 cut(s) | 456, 1914 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 799 |
| BpuEI | CTTGAG | 1 cut(s) | 2211 |
| BpuMI | CCSGG | 3 cut(s) | 3032, 3420, 3421 |
| BsaHI | GRCGYC | 2 cut(s) | 664, 3018 |
| BsaI | GGTCTC | 2 cut(s) | 380, 537 |
| BsaWI | WCCGGW | 3 cut(s) | 1258, 2374, 3503 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 158, 188, 623, 653, 1521, 1551 |
| Bse118I | RCCGGY | 2 cut(s) | 1258, 3110 |
| Bse1I | ACTGG | 8 cut(s) | 871, 1230, 2409, 2530, 2550, 3040, 3055, 3670 |
| Bse21I | CCTNAGG | 3 cut(s) | 2586, 3432, 3704 |
| Bse3DI | GCAATG | 4 cut(s) | 561, 672, 1932, 2388 |
| BseAI | TCCGGA | 2 cut(s) | 2374, 3503 |
| BseMI | GCAATG | 4 cut(s) | 561, 672, 1932, 2388 |
| BseNI | ACTGG | 8 cut(s) | 871, 1230, 2409, 2530, 2550, 3040, 3055, 3670 |
| BseRI | GAGGAG | 6 cut(s) | 101, 179, 492, 782, 3146, 3345 |
| BseSI | GKGCMC | 2 cut(s) | 630, 3040 |
| BseYI | CCCAGC | 1 cut(s) | 1464 |
| BsgI | GTGCAG | 4 cut(s) | 882, 957, 1842, 2053 |
| Bsh1236I | CGCG | 2 cut(s) | 1966, 3653 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2010 |
| BshFI | GGCC | 7 cut(s) | 811, 877, 943, 1056, 2178, 2705, 3544 |
| BshNI | GGYRCC | 3 cut(s) | 986, 3035, 3734 |
| BshTI | ACCGGT | 1 cut(s) | 1258 |
| BsiEI | CGRYCG | 1 cut(s) | 2010 |
| BsiHKAI | GWGCWC | 2 cut(s) | 630, 791 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3275, 3419 |
| BsiSI | CCGG | 8 cut(s) | 251, 846, 1259, 2375, 3031, 3111, 3420, 3504 |
| BslFI | GGGAC | 4 cut(s) | 853, 1523, 2538, 3402 |
| BsmAI | GTCTC | 5 cut(s) | 119, 380, 537, 1416, 2348 |
| BsmFI | GGGAC | 4 cut(s) | 853, 1523, 2538, 3402 |
| BsmI | GAATGC | 2 cut(s) | 370, 3112 |
| BsnI | GGCC | 7 cut(s) | 811, 877, 943, 1056, 2178, 2705, 3544 |
| Bso31I | GGTCTC | 2 cut(s) | 380, 537 |
| BsoBI | CYCGRG | 2 cut(s) | 3275, 3419 |
| Bsp1286I | GDGCHC | 3 cut(s) | 630, 791, 3040 |
| Bsp13I | TCCGGA | 2 cut(s) | 2374, 3503 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 799 |
| Bsp19I | CCATGG | 2 cut(s) | 2241, 2336 |
| BspANI | GGCC | 7 cut(s) | 811, 877, 943, 1056, 2178, 2705, 3544 |
| BspEI | TCCGGA | 2 cut(s) | 2374, 3503 |
| BspFNI | CGCG | 2 cut(s) | 1966, 3653 |
| BspMAI | CTGCAG | 4 cut(s) | 1300, 1312, 1621, 2086 |
| BspMI | ACCTGC | 1 cut(s) | 2827 |
| BspQI | GCTCTTC | 2 cut(s) | 1965, 2882 |
| BspT107I | GGYRCC | 3 cut(s) | 986, 3035, 3734 |
| BspTI | CTTAAG | 1 cut(s) | 275 |
| BspTNI | GGTCTC | 2 cut(s) | 380, 537 |
| BsrBI | CCGCTC | 1 cut(s) | 2002 |
| BsrDI | GCAATG | 4 cut(s) | 561, 672, 1932, 2388 |
| BsrFI | RCCGGY | 2 cut(s) | 1258, 3110 |
| BsrI | ACTGG | 8 cut(s) | 871, 1230, 2409, 2530, 2550, 3040, 3055, 3670 |
| BssAI | RCCGGY | 2 cut(s) | 1258, 3110 |
| BssNI | GRCGYC | 2 cut(s) | 664, 3018 |
| BssSI | CACGAG | 3 cut(s) | 504, 549, 1362 |
| BssT1I | CCWWGG | 3 cut(s) | 411, 2241, 2336 |
| Bst2BI | CACGAG | 3 cut(s) | 504, 549, 1362 |
| Bst4CI | ACNGT | 5 cut(s) | 259, 983, 1552, 2610, 3268 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 1965, 2882 |
| BstACI | GRCGYC | 2 cut(s) | 664, 3018 |
| BstAFI | CTTAAG | 1 cut(s) | 275 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1856, 2507, 3316, 3699 |
| BstC8I | GCNNGC | 8 cut(s) | 1172, 2004, 2259, 2503, 2688, 2752, 2867, 3173 |
| BstDSI | CCRYGG | 2 cut(s) | 2241, 2336 |
| BstEII | GGTNACC | 1 cut(s) | 1045 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 394, 3004 |
| BstFNI | CGCG | 2 cut(s) | 1966, 3653 |
| BstH2I | RGCGCY | 2 cut(s) | 463, 1465 |
| BstHHI | GCGC | 4 cut(s) | 462, 1464, 1925, 3193 |
| BstMAI | GTCTC | 5 cut(s) | 119, 380, 537, 1416, 2348 |
| BstMCI | CGRYCG | 1 cut(s) | 2010 |
| BstNSI | RCATGY | 5 cut(s) | 998, 1411, 2281, 2684, 3319 |
| BstPI | GGTNACC | 1 cut(s) | 1045 |
| BstSFI | CTRYAG | 7 cut(s) | 78, 255, 1092, 1296, 1308, 1617, 2082 |
| BstSLI | GKGCMC | 2 cut(s) | 630, 3040 |
| BstUI | CGCG | 2 cut(s) | 1966, 3653 |
| BstV2I | GAAGAC | 3 cut(s) | 210, 2889, 3341 |
| BstX2I | RGATCY | 5 cut(s) | 1328, 1844, 2735, 3163, 3481 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 717, 2965 |
| BstYI | RGATCY | 5 cut(s) | 1328, 1844, 2735, 3163, 3481 |
| Bsu36I | CCTNAGG | 3 cut(s) | 2586, 3432, 3704 |
| BsuI | GTATCC | 3 cut(s) | 426, 1570, 3512 |
| BsuRI | GGCC | 7 cut(s) | 811, 877, 943, 1056, 2178, 2705, 3544 |
| BtgI | CCRYGG | 2 cut(s) | 2241, 2336 |
| BtsI | GCAGTG | 2 cut(s) | 653, 894 |
| BveI | ACCTGC | 1 cut(s) | 2827 |
| Cac8I | GCNNGC | 8 cut(s) | 1172, 2004, 2259, 2503, 2688, 2752, 2867, 3173 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1295, 3431 |
| CfoI | GCGC | 4 cut(s) | 462, 1464, 1925, 3193 |
| Cfr10I | RCCGGY | 2 cut(s) | 1258, 3110 |
| Cfr9I | CCCGGG | 1 cut(s) | 3419 |
| CseI | GACGC | 4 cut(s) | 604, 641, 653, 3026 |
| CsiI | ACCWGGT | 2 cut(s) | 3730, 3770 |
| Csp6I | GTAC | 9 cut(s) | 744, 915, 1159, 1405, 1457, 1490, 3048, 3084, 3685 |
| CspAI | ACCGGT | 1 cut(s) | 1258 |
| CviQI | GTAC | 9 cut(s) | 744, 915, 1159, 1405, 1457, 1490, 3048, 3084, 3685 |
| DraIII | CACNNNGTG | 2 cut(s) | 2078, 3734 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 133 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 133 |
| EaeI | YGGCCR | 1 cut(s) | 3542 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 1965, 2882 |
| EarI | CTCTTC | 3 cut(s) | 117, 1965, 2882 |
| EciI | GGCGGA | 1 cut(s) | 3366 |
| Ecl136II | GAGCTC | 1 cut(s) | 789 |
| Eco130I | CCWWGG | 3 cut(s) | 411, 2241, 2336 |
| Eco24I | GRGCYC | 1 cut(s) | 791 |
| Eco31I | GGTCTC | 2 cut(s) | 380, 537 |
| Eco47I | GGWCC | 8 cut(s) | 867, 1433, 1537, 1625, 1802, 3299, 3416, 3823 |
| Eco47III | AGCGCT | 1 cut(s) | 1463 |
| Eco53kI | GAGCTC | 1 cut(s) | 789 |
| Eco57I | CTGAAG | 1 cut(s) | 319 |
| Eco81I | CCTNAGG | 3 cut(s) | 2586, 3432, 3704 |
| Eco88I | CYCGRG | 2 cut(s) | 3275, 3419 |
| Eco91I | GGTNACC | 1 cut(s) | 1045 |
| EcoICRI | GAGCTC | 1 cut(s) | 789 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 394, 3004 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1433, 1537 |
| EcoO65I | GGTNACC | 1 cut(s) | 1045 |
| EcoT14I | CCWWGG | 3 cut(s) | 411, 2241, 2336 |
| EcoT22I | ATGCAT | 2 cut(s) | 996, 2569 |
| EcoT38I | GRGCYC | 1 cut(s) | 791 |
| ErhI | CCWWGG | 3 cut(s) | 411, 2241, 2336 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3279, 3311 |
| FaqI | GGGAC | 4 cut(s) | 853, 1523, 2538, 3402 |
| FauI | CCCGC | 2 cut(s) | 1870, 1995 |
| FauNDI | CATATG | 1 cut(s) | 3306 |
| FbaI | TGATCA | 1 cut(s) | 1984 |
| FblI | GTMKAC | 2 cut(s) | 137, 189 |
| FriOI | GRGCYC | 1 cut(s) | 791 |
| FspBI | CTAG | 1 cut(s) | 2186 |
| FspI | TGCGCA | 2 cut(s) | 1924, 3192 |
| GlaI | GCGC | 4 cut(s) | 461, 1463, 1924, 3192 |
| GsaI | CCCAGC | 1 cut(s) | 1468 |
| GsuI | CTGGAG | 6 cut(s) | 57, 1055, 1471, 2650, 2873, 3072 |
| HaeII | RGCGCY | 2 cut(s) | 463, 1465 |
| HaeIII | GGCC | 7 cut(s) | 811, 877, 943, 1056, 2178, 2705, 3544 |
| HapII | CCGG | 8 cut(s) | 251, 846, 1259, 2375, 3031, 3111, 3420, 3504 |
| HgaI | GACGC | 4 cut(s) | 604, 641, 653, 3026 |
| HhaI | GCGC | 4 cut(s) | 462, 1464, 1925, 3193 |
| Hin1I | GRCGYC | 2 cut(s) | 664, 3018 |
| Hin6I | GCGC | 4 cut(s) | 460, 1462, 1923, 3191 |
| HinP1I | GCGC | 4 cut(s) | 460, 1462, 1923, 3191 |
| HincII | GTYRAC | 3 cut(s) | 759, 2627, 2977 |
| HindII | GTYRAC | 3 cut(s) | 759, 2627, 2977 |
| HindIII | AAGCTT | 2 cut(s) | 272, 2688 |
| HpaII | CCGG | 8 cut(s) | 251, 846, 1259, 2375, 3031, 3111, 3420, 3504 |
| HphI | GGTGA | 9 cut(s) | 1057, 1248, 1673, 1766, 1806, 1863, 2760, 3148, 3720 |
| Hpy99I | CGWCG | 3 cut(s) | 158, 161, 635 |
| HpyCH4III | ACNGT | 5 cut(s) | 259, 983, 1552, 2610, 3268 |
| HpyCH4IV | ACGT | 3 cut(s) | 580, 2464, 3818 |
| HpySE526I | ACGT | 3 cut(s) | 580, 2464, 3818 |
| Hsp92I | GRCGYC | 2 cut(s) | 664, 3018 |
| HspAI | GCGC | 4 cut(s) | 460, 1462, 1923, 3191 |
| Kpn2I | TCCGGA | 2 cut(s) | 2374, 3503 |
| Ksp22I | TGATCA | 1 cut(s) | 1984 |
| LguI | GCTCTTC | 2 cut(s) | 1965, 2882 |
| LmnI | GCTCC | 6 cut(s) | 76, 413, 1150, 1648, 1999, 3332 |
| MabI | ACCWGGT | 2 cut(s) | 3730, 3770 |
| MaeI | CTAG | 1 cut(s) | 2186 |
| MaeII | ACGT | 3 cut(s) | 580, 2464, 3818 |
| MbiI | CCGCTC | 1 cut(s) | 2002 |
| MfeI | CAATTG | 3 cut(s) | 1011, 1029, 1851 |
| MflI | RGATCY | 5 cut(s) | 1328, 1844, 2735, 3163, 3481 |
| MhlI | GDGCHC | 3 cut(s) | 630, 791, 3040 |
| MlsI | TGGCCA | 1 cut(s) | 3544 |
| MluNI | TGGCCA | 1 cut(s) | 3544 |
| MlyI | GAGTC | 8 cut(s) | 143, 256, 491, 1062, 1072, 2038, 2488, 3537 |
| MmeI | TCCRAC | 7 cut(s) | 1382, 1822, 1829, 2020, 2253, 2471, 2763 |
| Mox20I | TGGCCA | 1 cut(s) | 3544 |
| Mph1103I | ATGCAT | 2 cut(s) | 996, 2569 |
| MroI | TCCGGA | 2 cut(s) | 2374, 3503 |
| MscI | TGGCCA | 1 cut(s) | 3544 |
| MseI | TTAA | 7 cut(s) | 39, 270, 276, 483, 1184, 1599, 2468 |
| MslI | CAYNNNNRTG | 3 cut(s) | 715, 904, 1752 |
| Msp20I | TGGCCA | 1 cut(s) | 3544 |
| MspA1I | CMGCKG | 4 cut(s) | 1343, 2670, 2869, 2893 |
| MspCI | CTTAAG | 1 cut(s) | 275 |
| MspI | CCGG | 8 cut(s) | 251, 846, 1259, 2375, 3031, 3111, 3420, 3504 |
| MunI | CAATTG | 3 cut(s) | 1011, 1029, 1851 |
| Mva1269I | GAATGC | 2 cut(s) | 370, 3112 |
| MvnI | CGCG | 2 cut(s) | 1966, 3653 |
| NciI | CCSGG | 3 cut(s) | 3032, 3420, 3421 |
| NcoI | CCATGG | 2 cut(s) | 2241, 2336 |
| NdeI | CATATG | 1 cut(s) | 3306 |
| NmuCI | GTSAC | 3 cut(s) | 1045, 2604, 3646 |
| NsbI | TGCGCA | 2 cut(s) | 1924, 3192 |
| NsiI | ATGCAT | 2 cut(s) | 996, 2569 |
| NspI | RCATGY | 5 cut(s) | 998, 1411, 2281, 2684, 3319 |
| OliI | CACNNNNGTG | 1 cut(s) | 904 |
| PaqCI | CACCTGC | 1 cut(s) | 2827 |
| PasI | CCCWGGG | 1 cut(s) | 3022 |
| PciI | ACATGT | 2 cut(s) | 1407, 2680 |
| PciSI | GCTCTTC | 2 cut(s) | 1965, 2882 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2470 |
| PctI | GAATGC | 2 cut(s) | 370, 3112 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 740, 1323, 1364, 2762 |
| PfoI | TCCNGGA | 1 cut(s) | 2809 |
| PinAI | ACCGGT | 1 cut(s) | 1258 |
| Ple19I | CGATCG | 1 cut(s) | 2010 |
| PleI | GAGTC | 8 cut(s) | 142, 255, 491, 1062, 1072, 2037, 2488, 3536 |
| PpsI | GAGTC | 8 cut(s) | 142, 255, 491, 1062, 1072, 2037, 2488, 3536 |
| PpuMI | RGGWCCY | 2 cut(s) | 1433, 1537 |
| PscI | ACATGT | 2 cut(s) | 1407, 2680 |
| PsiI | TTATAA | 1 cut(s) | 974 |
| Psp124BI | GAGCTC | 1 cut(s) | 791 |
| Psp5II | RGGWCCY | 2 cut(s) | 1433, 1537 |
| PspEI | GGTNACC | 1 cut(s) | 1045 |
| PspFI | CCCAGC | 1 cut(s) | 1464 |
| PspPPI | RGGWCCY | 2 cut(s) | 1433, 1537 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 990, 1022 |
| PstI | CTGCAG | 4 cut(s) | 1300, 1312, 1621, 2086 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1295, 3431 |
| PsuI | RGATCY | 5 cut(s) | 1328, 1844, 2735, 3163, 3481 |
| PvuI | CGATCG | 1 cut(s) | 2010 |
| PvuII | CAGCTG | 1 cut(s) | 2869 |
| RgaI | GCGATCGC | 1 cut(s) | 2010 |
| RsaI | GTAC | 9 cut(s) | 745, 916, 1160, 1406, 1458, 1491, 3049, 3085, 3686 |
| RsaNI | GTAC | 9 cut(s) | 744, 915, 1159, 1405, 1457, 1490, 3048, 3084, 3685 |
| RseI | CAYNNNNRTG | 3 cut(s) | 715, 904, 1752 |
| SacI | GAGCTC | 1 cut(s) | 791 |
| SapI | GCTCTTC | 2 cut(s) | 1965, 2882 |
| SaqAI | TTAA | 7 cut(s) | 39, 270, 276, 483, 1184, 1599, 2468 |
| SchI | GAGTC | 8 cut(s) | 143, 256, 491, 1062, 1072, 2038, 2488, 3537 |
| SduI | GDGCHC | 3 cut(s) | 630, 791, 3040 |
| SexAI | ACCWGGT | 2 cut(s) | 3730, 3770 |
| SfaAI | GCGATCGC | 1 cut(s) | 2010 |
| SfcI | CTRYAG | 7 cut(s) | 78, 255, 1092, 1296, 1308, 1617, 2082 |
| SgfI | GCGATCGC | 1 cut(s) | 2010 |
| SinI | GGWCC | 8 cut(s) | 867, 1433, 1537, 1625, 1802, 3299, 3416, 3823 |
| SmaI | CCCGGG | 1 cut(s) | 3421 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 715, 904, 1752 |
| SmlI | CTYRAG | 2 cut(s) | 275, 2226 |
| SmoI | CTYRAG | 2 cut(s) | 275, 2226 |
| SspMI | CTAG | 1 cut(s) | 2186 |
| SstI | GAGCTC | 1 cut(s) | 791 |
| StyI | CCWWGG | 3 cut(s) | 411, 2241, 2336 |
| TaaI | ACNGT | 5 cut(s) | 259, 983, 1552, 2610, 3268 |
| TaiI | ACGT | 3 cut(s) | 583, 2467, 3821 |
| TaqI | TCGA | 5 cut(s) | 66, 525, 765, 2726, 3238 |
| TatI | WGTACW | 4 cut(s) | 914, 1404, 1456, 1489 |
| TauI | GCSGC | 1 cut(s) | 3293 |
| Tru1I | TTAA | 7 cut(s) | 39, 270, 276, 483, 1184, 1599, 2468 |
| Tru9I | TTAA | 7 cut(s) | 39, 270, 276, 483, 1184, 1599, 2468 |
| TseFI | GTSAC | 3 cut(s) | 1045, 2604, 3646 |
| Tsp45I | GTSAC | 3 cut(s) | 1045, 2604, 3646 |
| TspGWI | ACGGA | 5 cut(s) | 207, 1404, 1744, 1931, 3815 |
| TspMI | CCCGGG | 1 cut(s) | 3419 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 740, 1323, 1364, 2762 |
| Vha464I | CTTAAG | 1 cut(s) | 275 |
| VneI | GTGCAC | 1 cut(s) | 626 |
| VpaK11BI | GGWCC | 8 cut(s) | 867, 1433, 1537, 1625, 1802, 3299, 3416, 3823 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 394, 3004 |
| XapI | RAATTY | 5 cut(s) | 773, 858, 1522, 3073, 3403 |
| XceI | RCATGY | 5 cut(s) | 998, 1411, 2281, 2684, 3319 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3047 |
| XmaI | CCCGGG | 1 cut(s) | 3419 |
| XmiI | GTMKAC | 2 cut(s) | 137, 189 |
| XspI | CTAG | 1 cut(s) | 2186 |
| Zsp2I | ATGCAT | 2 cut(s) | 996, 2569 |