Rh5CG067600

mediator of RNA polymerase II transcription subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
5100671 .. 5110426
9756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG067600.1

Sequence Viewer

Length: 3240 bp
ATGAGTCAAGTCGACGAAGCTGACGACGAGCCCAGCTTGGCTCAGTCAATTGAAATTGAACAAAAACCCCAAACCCCCAACCCTGAACAACCACAAGAAGAAGAAGAAGAAGAAGAGCCCCAAAACGACAACGATCCGATGGAGGAAGACGCCTCCTCCGTCAGCCCATCCGCCGTCTTCTGTATTGGGCTCAAGCAGCCCAGGTCCGATTTGCTCCACAAGATGAGCGTCCCTGAGCTTTGTCGCAATTTTAGTGCGGTGGCTTGGTGCGGGAAGCTGAATGCCATAGCTTGTGCCTCAGAAACTTGTGCAAGAATTCCAAGTTCTAATGCAAATCCACCTTTTTGGATTCCCATTCATATCGTAATCCCAGAGCGACCAACTGAGTGTGCAGTATTCAATGTTAATGCAGATTCTCCTCGTGATTCTGTTCAGTTTATTGAATGGTCACCCACTTCTTGCCCTCGTGCCTTACTGATTGCTAATTTTCATGGGAGAATAACGATCTGGACTCAACCTTCTCAAGGGGCAGCTAATTTAGTACGTGATGCTAGCAGCTGGTTACTAGAGCATGAATGGCAGCAGGATATTGCAGTTGTTACAAAGTGGCTATCAGGGGTGTCACCGTATAGGTGGCTTTCCTCAAAATCAAGTAGTCCTTCAAATGCGAAGTCAACTTTTGAAGAAAAATTTCTTTCACAAGAATCCCAGAATTCAGATAGGTGGCCAAATTTTCTTTGTGTCTGTTCTGTTTTCTCGTCAGGCTCTGTTCAGCTTCATTGGTCTCAATGGCCTCCTAATCAAAGTACTGCAGCACCAAAGTGGTTTCAAACGAGCAAGGGACTCTTGGGCGCTGGGCCTAGTGGAATCATGGCTGCTGATGCTATCATTACAGATAGTGGTGCTATGCACGTTGCAGGTGTTCCAATTGTAAACCCATCTACTGTTGTTGTTTGGGAGGTCACTCCTGGCCTTGGCAATGGATTTCACGTAACACCGAAGATAACCACAAGCAATGGGGTCCCACCTTCAATAAGTCCACCCAATTGGGCAGGTTTTTCCCCTTTAGCTGCATATTTGTTTAGCTGGCAAGATTATCTAATATCCGAATCAAAGCAAGGGCGAAAGCAGACAGATTCAGATTTCAGTGATACTGTACCACTCCATTGCTCTCCAGTTTCAAATTTTTCAGCATATGTGAGCCCTGAGGCTGCTGCTCAATCTGCAACAACCACCACGTGGGGATCTGGAGTTACTGCAGTTGCCTTTGATCCAACTCGGGGTGGTTCTGTCATTGCTGTTGTGATAGTTGAGGGACAATACATGTCGCCTTATGATCCAGATGAGGGTCCTTCAATTACAGGATGGAGAGTGCAACGCTGGGAATCATCCGTTCAGCCAGTTGTGCTTCATCAAATATTTGGGAATCCCACTTCCACTTTTGGTGGGCAGGCACCCATGCAAACAGTTTGGCTGTCCAAAGTGGACACATGTATACAACCAACTAATGATTTTAAAAGTCACCAAGCAGCTGCAACAGGAGTAATCTCTGAGCCAAAGAAGACACCTGATTCTAGCATTGAGAAGGCAAAAAGAGTCAATTTTGATCCTTTTGACTTGCCAAGTGATGTTAGAACTCTTGCTCGAATAGTCTATTCTGCTCATGGTGGTGAAATTGCTGTTGCTTTTCTTCGGGGCGGGGTTCACATATTCTCTGGTCCAAACTTCACACCTGTTGACAACTACCAGATTAACGTTGGATCTGCAATTGCTGCTCCTGCCTTCTCATCGACAAGCTGCTGCTCAGCTTCTGTTTGGCATGACAGTAGTAAGGACCGTACCATTTTAAAAATACTACGTGTTCTTCCACCCGCTGTTCCAAGCGGTCAAGTGAAGGCGAATTCATCAACGTGGGAACGTGCAATTGCAGAGAGATTTTGGTGGAGTCTTTTGGTTGGAGTTGATTGGTGGGATGCAGTTGGGTGTACGCAGAGTGCTGCCGAAGATGGCATTGTTTCTCTGAACAGTGTCATTGCAGTATTGGATGCAGATTTTCATTCTCTTCCTTCTACTCAGCACAGACAACAGTACGGTCCTAGTCTAGATAGGATCAAATGCAGGCTGCTGGAAGGCACAAATGCACAAGAAGTTAGGGCAATGGTTCTAGACATGCAAGCTAGGCTGTTGCTAGACATGCTTGGGAAAGGAATTGAATCGGCTTTGATAAATCCATCTGCTTTGGTACAAGAGCCATGGCTGGCATCTGGTGAAACTTTATCCAGCATTGAACCTGAAGCAATGGCTGTTGAGCCAGCACTTGTGTCAAATATTCAGGCTTACGTTGATGCAGTTCTTGATCTAGCTTCACATTTCATCACTCGCTTGCGGCGCTATGCTAGTTTTTGTCGCACATTGGCCAGCCATGCTGTTACTGCTGGCACTGGTAGCAATCGCAATATGGTAGCTAGTCCTACCCAGAGTACGGGTTCTCCTGCAACTAATCAGGGAGGTCAAAATGGACCAACATCTTCCACAGGAAACACCCAGATGCAAGCTTGGGTACAAGGTGCCATTGCCAAGATCAGTAGTACCTCTGATGGAGTGCCCAATTCCACCCCAAACCCCATCAGTGGTCCATCTTCTTTCATGCCAATAAGTATAAACACAGGAACATTTCCAGGAACACCTGCTGTTAGGCTGATTGGAGATTGCCATTTTCTTCATAGATTATGCCAGCTTTTGCTTTTCTGTTTTTTCTTTCGGCGAACTCAGCTACCCCGTTTTACTGGGGCTGCACAGAGAAATACAGATGCAAACATGCAAAAGCCTCAGCCTGGGGCTCCTGGGAAAGTGGAGGAAATCAGTTCTGTATCTGTAAAACCATCCTCAACCATAGTTAGACCGGAGGAGAGTCAGGTAGCTCGGGCTGGTCAGATCATACCTGCAGCAAAAGGAGTTGAGGAAGGACCTGCTGGAAGGTCAAGATTAGGTGCTGGAAATGCTGGTCAGGGATACACTTTTGAGGAGGTGAAAGTTCTTTTTCTCATCCTTATGGATCTTTGCAAAAGAACAGCAAACCTGGTTCATCCATTGCCAGTGTCTCAGGTGGGAAGCGGCAACATTCAAGTGCGGCTGCATTACATTGATGGGAATTATACTGTACTCCCAGAAGTGGTGGAAGCATCCCTCGGCCCTCATATGCAGGTATTGTTGGATTTCCTGAAAGATGACCAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1079

Amino Acids

116.44

Weight (kDa)

5.36

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 908, 2695
Acc36I ACCTGC 6 cut(s) 908, 1043, 2695, 2950, 2977, 3193
AccB1I GGYRCC 2 cut(s) 1453, 2567
AccB7I CCANNNNNTGG 1 cut(s) 1239
AccI GTMKAC 2 cut(s) 12, 1495
AciI CCGC 9 cut(s) 171, 257, 270, 1698, 1872, 1884, 2386, 3114, 3130
AclI AACGTT 1 cut(s) 1755
AclWI GGATC 8 cut(s) 128, 1252, 1265, 1331, 1601, 1768, 2117, 3063
AcoI YGGCCR 2 cut(s) 725, 2415
AcsI RAATTY 6 cut(s) 315, 689, 712, 730, 1183, 1900
AcuI CTGAAG 1 cut(s) 2313
AcvI CACGTG 1 cut(s) 1239
AcyI GRCGYC 1 cut(s) 150
AdeI CACNNNGTG 1 cut(s) 1239
AfiI CCNNNNNNNGG 9 cut(s) 524, 974, 1239, 1280, 1346, 2482, 2630, 2834, 3172
AflIII ACRYGT 3 cut(s) 1323, 1490, 1858
AjnI CCWGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
AleI CACNNNNGTG 1 cut(s) 820
Alw26I GTCTC 2 cut(s) 789, 3105
AlwI GGATC 8 cut(s) 128, 1252, 1265, 1331, 1601, 1768, 2117, 3063
AlwNI CAGNNNCTG 2 cut(s) 767, 1811
Ama87I CYCGRG 2 cut(s) 1278, 2922
AoxI GGCC 6 cut(s) 725, 791, 857, 970, 2415, 3190
ApoI RAATTY 6 cut(s) 315, 689, 712, 730, 1183, 1900
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
Asp700I GAANNNNTTC 1 cut(s) 690
AspLEI GCGC 2 cut(s) 854, 2391
AsuHPI GGTGA 6 cut(s) 441, 615, 1514, 1682, 2279, 3040
AsuNHI GCTAGC 1 cut(s) 551
AvaI CYCGRG 2 cut(s) 1278, 2922
AvaII GGWCC 9 cut(s) 204, 1021, 1349, 1718, 1834, 2093, 2519, 2633, 2966
AxyI CCTNAGG 1 cut(s) 1206
BaeGI GKGCMC 1 cut(s) 2607
BalI TGGCCA 2 cut(s) 727, 2417
BanI GGYRCC 2 cut(s) 1453, 2567
BanII GRGCYC 5 cut(s) 33, 120, 192, 1205, 2842
BauI CACGAG 2 cut(s) 420, 465
BbrPI CACGTG 1 cut(s) 1239
BbsI GAAGAC 3 cut(s) 153, 169, 1568
BbvCI CCTCAGC 1 cut(s) 2829
BceAI ACGGC 1 cut(s) 158
BciT130I CCWGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
BciVI GTATCC 1 cut(s) 3005
BcoDI GTCTC 2 cut(s) 789, 3105
BfmI CTRYAG 3 cut(s) 810, 1257, 2943
BfoI RGCGCY 2 cut(s) 855, 2392
BfuAI ACCTGC 6 cut(s) 908, 1043, 2695, 2950, 2977, 3193
BfuI GTATCC 1 cut(s) 3005
BlpI GCTNAGC 1 cut(s) 1804
BmcAI AGTACT 1 cut(s) 808
Bme1390I CCNGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
Bme18I GGWCC 9 cut(s) 204, 1021, 1349, 1718, 1834, 2093, 2519, 2633, 2966
BmeT110I CYCGRG 2 cut(s) 1278, 2922
BmiI GGNNCC 6 cut(s) 1022, 1023, 1350, 1455, 2569, 2841
BmrFI CCNGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
BmrI ACTGGG 1 cut(s) 2796
BmsI GCATC 9 cut(s) 538, 871, 1963, 2035, 2270, 2335, 2538, 2800, 3191
BmtI GCTAGC 1 cut(s) 555
BmuI ACTGGG 1 cut(s) 2796
BpiI GAAGAC 3 cut(s) 153, 169, 1568
BpmI CTGGAG 2 cut(s) 1158, 1269
Bpu10I CCTNAGC 2 cut(s) 234, 2829
Bpu1102I GCTNAGC 1 cut(s) 1804
BpuEI CTTGAG 2 cut(s) 176, 507
BsaAI YACGTR 4 cut(s) 545, 991, 1239, 1859
BsaHI GRCGYC 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 789
BsaJI CCNNGG 6 cut(s) 200, 973, 2252, 2834, 2843, 3187
BsaWI WCCGGW 1 cut(s) 2902
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 2473, 2503
Bsc4I CCNNNNNNNGG 9 cut(s) 524, 974, 1239, 1280, 1346, 2482, 2630, 2834, 3172
Bse1I ACTGG 5 cut(s) 1175, 1400, 2446, 2791, 3095
Bse21I CCTNAGG 1 cut(s) 1206
Bse3DI GCAATG 9 cut(s) 985, 1021, 1165, 1293, 2031, 2163, 2304, 2571, 3089
BseBI CCWGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
BseDI CCNNGG 6 cut(s) 200, 973, 2252, 2834, 2843, 3187
BseGI GGATG 9 cut(s) 167, 1370, 1388, 1978, 2050, 2882, 3045, 3085, 3182
BseLI CCNNNNNNNGG 9 cut(s) 524, 974, 1239, 1280, 1346, 2482, 2630, 2834, 3172
BseMI GCAATG 9 cut(s) 985, 1021, 1165, 1293, 2031, 2163, 2304, 2571, 3089
BseNI ACTGG 5 cut(s) 1175, 1400, 2446, 2791, 3095
BseRI GAGGAG 4 cut(s) 145, 408, 2921, 3038
BseSI GKGCMC 1 cut(s) 2607
BseYI CCCAGC 3 cut(s) 32, 854, 1380
BsgI GTGCAG 2 cut(s) 411, 2778
BshFI GGCC 6 cut(s) 727, 793, 859, 972, 2417, 3192
BshNI GGYRCC 2 cut(s) 1453, 2567
BsiHKCI CYCGRG 2 cut(s) 1278, 2922
BsiSI CCGG 1 cut(s) 2903
BslFI GGGAC 4 cut(s) 215, 855, 1007, 1329
BslI CCNNNNNNNGG 9 cut(s) 524, 974, 1239, 1280, 1346, 2482, 2630, 2834, 3172
BsmAI GTCTC 2 cut(s) 789, 3105
BsmFI GGGAC 4 cut(s) 215, 855, 1007, 1329
BsmI GAATGC 1 cut(s) 286
BsnI GGCC 6 cut(s) 727, 793, 859, 972, 2417, 3192
Bso31I GGTCTC 1 cut(s) 789
BsoBI CYCGRG 2 cut(s) 1278, 2922
Bsp1286I GDGCHC 6 cut(s) 33, 120, 192, 1205, 2607, 2842
Bsp1720I GCTNAGC 1 cut(s) 1804
Bsp19I CCATGG 1 cut(s) 2252
BspACI CCGC 9 cut(s) 171, 257, 270, 1698, 1872, 1884, 2386, 3114, 3130
BspANI GGCC 6 cut(s) 727, 793, 859, 972, 2417, 3192
BspLI GGNNCC 6 cut(s) 1022, 1023, 1350, 1455, 2569, 2841
BspMAI CTGCAG 3 cut(s) 814, 1261, 2947
BspMI ACCTGC 6 cut(s) 908, 1043, 2695, 2950, 2977, 3193
BspOI GCTAGC 1 cut(s) 555
BspPI GGATC 8 cut(s) 128, 1252, 1265, 1331, 1601, 1768, 2117, 3063
BspQI GCTCTTC 1 cut(s) 108
BspT107I GGYRCC 2 cut(s) 1453, 2567
BspTNI GGTCTC 1 cut(s) 789
BsrDI GCAATG 9 cut(s) 985, 1021, 1165, 1293, 2031, 2163, 2304, 2571, 3089
BsrI ACTGG 5 cut(s) 1175, 1400, 2446, 2791, 3095
BssECI CCNNGG 6 cut(s) 200, 973, 2252, 2834, 2843, 3187
BssNAI GTATAC 1 cut(s) 1496
BssNI GRCGYC 1 cut(s) 150
BssSI CACGAG 2 cut(s) 420, 465
BssT1I CCWWGG 2 cut(s) 973, 2252
Bst1107I GTATAC 1 cut(s) 1496
Bst2BI CACGAG 2 cut(s) 420, 465
Bst2UI CCWGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
Bst6I CTCTTC 2 cut(s) 108, 2067
BstACI GRCGYC 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 1772
BstBAI YACGTR 4 cut(s) 545, 991, 1239, 1859
BstDSI CCRYGG 1 cut(s) 2252
BstEII GGTNACC 1 cut(s) 447
BstENI CCTNNNNNAGG 1 cut(s) 522
BstF5I GGATG 9 cut(s) 167, 1370, 1388, 1978, 2050, 2882, 3045, 3085, 3182
BstH2I RGCGCY 2 cut(s) 855, 2392
BstHHI GCGC 2 cut(s) 854, 2391
BstMAI GTCTC 2 cut(s) 789, 3105
BstNI CCWGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
BstNSI RCATGY 5 cut(s) 1327, 1494, 2173, 2197, 2821
BstPI GGTNACC 1 cut(s) 447
BstSCI CCNGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
BstSFI CTRYAG 3 cut(s) 810, 1257, 2943
BstSLI GKGCMC 1 cut(s) 2607
BstV2I GAAGAC 3 cut(s) 153, 169, 1568
BstX2I RGATCY 3 cut(s) 1244, 1760, 3055
BstXI CCANNNNNNTGG 2 cut(s) 345, 1047
BstYI RGATCY 3 cut(s) 1244, 1760, 3055
BstZ17I GTATAC 1 cut(s) 1496
Bsu36I CCTNAGG 1 cut(s) 1206
BsuI GTATCC 1 cut(s) 3005
BsuRI GGCC 6 cut(s) 727, 793, 859, 972, 2417, 3192
BtgI CCRYGG 1 cut(s) 2252
BtsCI GGATG 9 cut(s) 167, 1370, 1388, 1978, 2050, 2882, 3045, 3085, 3182
BtsIMutI CAGTG 5 cut(s) 1153, 2032, 2439, 2635, 3102
BveI ACCTGC 6 cut(s) 908, 1043, 2695, 2950, 2977, 3193
CaiI CAGNNNCTG 2 cut(s) 767, 1811
CfoI GCGC 2 cut(s) 854, 2391
CseI GACGC 2 cut(s) 158, 217
CsiI ACCWGGT 1 cut(s) 3078
DraI TTTAAA 2 cut(s) 1516, 1848
DraIII CACNNNGTG 1 cut(s) 1239
EaeI YGGCCR 2 cut(s) 725, 2415
Eam1104I CTCTTC 2 cut(s) 108, 2067
EarI CTCTTC 2 cut(s) 108, 2067
EciI GGCGGA 1 cut(s) 160
Eco130I CCWWGG 2 cut(s) 973, 2252
Eco24I GRGCYC 5 cut(s) 33, 120, 192, 1205, 2842
Eco31I GGTCTC 1 cut(s) 789
Eco47I GGWCC 9 cut(s) 204, 1021, 1349, 1718, 1834, 2093, 2519, 2633, 2966
Eco57I CTGAAG 1 cut(s) 2313
Eco72I CACGTG 1 cut(s) 1239
Eco81I CCTNAGG 1 cut(s) 1206
Eco88I CYCGRG 2 cut(s) 1278, 2922
Eco91I GGTNACC 1 cut(s) 447
EcoNI CCTNNNNNAGG 1 cut(s) 522
EcoO109I RGGNCCY 3 cut(s) 1021, 1349, 2966
EcoO65I GGTNACC 1 cut(s) 447
EcoRI GAATTC 3 cut(s) 315, 712, 1900
EcoRII CCWGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
EcoT14I CCWWGG 2 cut(s) 973, 2252
EcoT38I GRGCYC 5 cut(s) 33, 120, 192, 1205, 2842
ErhI CCWWGG 2 cut(s) 973, 2252
FalI AAGNNNNNCTT 4 cut(s) 643, 675, 830, 862
FaqI GGGAC 4 cut(s) 215, 855, 1007, 1329
FauI CCCGC 3 cut(s) 263, 1691, 1879
FauNDI CATATG 2 cut(s) 1195, 3198
FblI GTMKAC 2 cut(s) 12, 1495
FokI GGATG 9 cut(s) 154, 1375, 1377, 1985, 2057, 2869, 3032, 3072, 3169
FriOI GRGCYC 5 cut(s) 33, 120, 192, 1205, 2842
GlaI GCGC 2 cut(s) 853, 2390
GsaI CCCAGC 3 cut(s) 36, 858, 1384
GsuI CTGGAG 2 cut(s) 1158, 1269
HaeII RGCGCY 2 cut(s) 855, 2392
HaeIII GGCC 6 cut(s) 727, 793, 859, 972, 2417, 3192
HapII CCGG 1 cut(s) 2903
HgaI GACGC 2 cut(s) 158, 217
HhaI GCGC 2 cut(s) 854, 2391
Hin1I GRCGYC 1 cut(s) 150
Hin6I GCGC 2 cut(s) 852, 2389
HinP1I GCGC 2 cut(s) 852, 2389
HincII GTYRAC 3 cut(s) 13, 675, 1738
HindII GTYRAC 3 cut(s) 13, 675, 1738
HindIII AAGCTT 1 cut(s) 2553
HpaII CCGG 1 cut(s) 2903
HphI GGTGA 6 cut(s) 441, 615, 1514, 1682, 2279, 3040
Hpy166II GTNNAC 9 cut(s) 13, 675, 934, 1040, 1486, 1496, 1705, 1738, 1986
Hpy188III TCNNGA 9 cut(s) 422, 508, 1248, 1340, 2102, 2165, 2354, 2982, 3220
Hpy8I GTNNAC 9 cut(s) 13, 675, 934, 1040, 1486, 1496, 1705, 1738, 1986
Hpy99I CGWCG 2 cut(s) 17, 29
HpyCH4IV ACGT 9 cut(s) 544, 912, 990, 1238, 1755, 1858, 1910, 1918, 2340
HpySE526I ACGT 9 cut(s) 544, 912, 990, 1238, 1755, 1858, 1910, 1918, 2340
Hsp92I GRCGYC 1 cut(s) 150
HspAI GCGC 2 cut(s) 852, 2389
KflI GGGWCCC 1 cut(s) 1021
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 3 cut(s) 219, 1780, 2845
LweI GCATC 9 cut(s) 538, 871, 1963, 2035, 2270, 2335, 2538, 2800, 3191
MabI ACCWGGT 1 cut(s) 3078
MaeII ACGT 9 cut(s) 544, 912, 990, 1238, 1755, 1858, 1910, 1918, 2340
MaeIII GTNAC 9 cut(s) 447, 561, 598, 621, 961, 991, 1252, 1520, 2428
MfeI CAATTG 5 cut(s) 48, 927, 1045, 1767, 1923
MflI RGATCY 3 cut(s) 1244, 1760, 3055
MhlI GDGCHC 6 cut(s) 33, 120, 192, 1205, 2607, 2842
MlsI TGGCCA 2 cut(s) 727, 2417
MluNI TGGCCA 2 cut(s) 727, 2417
MlyI GAGTC 6 cut(s) 13, 505, 837, 1605, 1954, 2920
MmeI TCCRAC 4 cut(s) 1298, 1738, 1936, 3192
Mox20I TGGCCA 2 cut(s) 727, 2417
MroXI GAANNNNTTC 1 cut(s) 690
MscI TGGCCA 2 cut(s) 727, 2417
MseI TTAA 4 cut(s) 405, 1515, 1752, 1847
MslI CAYNNNNRTG 6 cut(s) 820, 1668, 1909, 2546, 3050, 3125
Msp20I TGGCCA 2 cut(s) 727, 2417
MspA1I CMGCKG 3 cut(s) 558, 1532, 1874
MspI CCGG 1 cut(s) 2903
MspR9I CCNGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
MunI CAATTG 5 cut(s) 48, 927, 1045, 1767, 1923
Mva1269I GAATGC 1 cut(s) 286
MvaI CCWGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
NcoI CCATGG 1 cut(s) 2252
NdeI CATATG 2 cut(s) 1195, 3198
NheI GCTAGC 1 cut(s) 551
NlaIV GGNNCC 6 cut(s) 1022, 1023, 1350, 1455, 2569, 2841
NmeAIII GCCGAG 1 cut(s) 3168
NmuCI GTSAC 4 cut(s) 447, 621, 961, 1520
NspI RCATGY 5 cut(s) 1327, 1494, 2173, 2197, 2821
OliI CACNNNNGTG 1 cut(s) 820
PaqCI CACCTGC 2 cut(s) 908, 2695
PciI ACATGT 2 cut(s) 1323, 1490
PciSI GCTCTTC 1 cut(s) 108
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 156
PctI GAATGC 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 690
PflMI CCANNNNNTGG 1 cut(s) 1239
PfoI TCCNGGA 1 cut(s) 2677
PleI GAGTC 6 cut(s) 12, 505, 837, 1604, 1953, 2919
PmaCI CACGTG 1 cut(s) 1239
PmlI CACGTG 1 cut(s) 1239
PpsI GAGTC 6 cut(s) 12, 505, 837, 1604, 1953, 2919
Ppu21I YACGTR 4 cut(s) 545, 991, 1239, 1859
PpuMI RGGWCCY 3 cut(s) 1021, 1349, 2966
PscI ACATGT 2 cut(s) 1323, 1490
Psp1406I AACGTT 1 cut(s) 1755
Psp5II RGGWCCY 3 cut(s) 1021, 1349, 2966
Psp6I CCWGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
PspCI CACGTG 1 cut(s) 1239
PspEI GGTNACC 1 cut(s) 447
PspFI CCCAGC 3 cut(s) 32, 854, 1380
PspGI CCWGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
PspN4I GGNNCC 6 cut(s) 1022, 1023, 1350, 1455, 2569, 2841
PspPPI RGGWCCY 3 cut(s) 1021, 1349, 2966
PstI CTGCAG 3 cut(s) 814, 1261, 2947
PstNI CAGNNNCTG 2 cut(s) 767, 1811
PsuI RGATCY 3 cut(s) 1244, 1760, 3055
PvuII CAGCTG 2 cut(s) 558, 1532
RseI CAYNNNNRTG 6 cut(s) 820, 1668, 1909, 2546, 3050, 3125
SalI GTCGAC 1 cut(s) 11
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 4 cut(s) 405, 1515, 1752, 1847
ScaI AGTACT 1 cut(s) 808
SchI GAGTC 6 cut(s) 13, 505, 837, 1605, 1954, 2920
ScrFI CCNGG 6 cut(s) 202, 969, 2679, 2835, 2844, 3080
SduI GDGCHC 6 cut(s) 33, 120, 192, 1205, 2607, 2842
SexAI ACCWGGT 1 cut(s) 3078
SfaNI GCATC 9 cut(s) 538, 871, 1963, 2035, 2270, 2335, 2538, 2800, 3191
SfcI CTRYAG 3 cut(s) 810, 1257, 2943
SinI GGWCC 9 cut(s) 204, 1021, 1349, 1718, 1834, 2093, 2519, 2633, 2966
SmiMI CAYNNNNRTG 6 cut(s) 820, 1668, 1909, 2546, 3050, 3125
SmlI CTYRAG 2 cut(s) 191, 522
SmoI CTYRAG 2 cut(s) 191, 522
SsiI CCGC 9 cut(s) 171, 257, 270, 1698, 1872, 1884, 2386, 3114, 3130
SspI AATATT 2 cut(s) 1419, 2329
StyD4I CCNGG 6 cut(s) 200, 967, 2677, 2833, 2842, 3078
StyI CCWWGG 2 cut(s) 973, 2252
TaiI ACGT 9 cut(s) 547, 915, 993, 1241, 1758, 1861, 1913, 1921, 2343
TaqI TCGA 3 cut(s) 12, 1645, 1790
TatI WGTACW 2 cut(s) 806, 3160
TauI GCSGC 3 cut(s) 2389, 3117, 3133
Tru1I TTAA 4 cut(s) 405, 1515, 1752, 1847
Tru9I TTAA 4 cut(s) 405, 1515, 1752, 1847
TscAI CASTG 5 cut(s) 1153, 2032, 2446, 2635, 3102
TseFI GTSAC 4 cut(s) 447, 621, 961, 1520
Tsp45I GTSAC 4 cut(s) 447, 621, 961, 1520
TspGWI ACGGA 2 cut(s) 148, 1381
TspRI CASTG 5 cut(s) 1153, 2032, 2446, 2635, 3102
Van91I CCANNNNNTGG 1 cut(s) 1239
VpaK11BI GGWCC 9 cut(s) 204, 1021, 1349, 1718, 1834, 2093, 2519, 2633, 2966
XagI CCTNNNNNAGG 1 cut(s) 522
XapI RAATTY 6 cut(s) 315, 689, 712, 730, 1183, 1900
XbaI TCTAGA 2 cut(s) 2101, 2164
XceI RCATGY 5 cut(s) 1327, 1494, 2173, 2197, 2821
XcmI CCANNNNNNNNNTGG 1 cut(s) 1754
XmiI GTMKAC 2 cut(s) 12, 1495
XmnI GAANNNNTTC 1 cut(s) 690
ZrmI AGTACT 1 cut(s) 808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.