mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04920 AT4G04920 AT4G04920 |
| fragaria_vesca | FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 FvH4_3g04860 |
| malus_domestica | MD01G1005800.v1.1 MD05G1316200.v1.1 MD10G1296700.v1.1 |
| prunus_persica | Prupe.4G043900_v2.0.a1 Prupe.4G043900_v2.0.a1 |
| pyrus_communis | pycom05g29330 pycom10g24950 |
| rosa_chinensis | RchiOBHm_Chr5g0008021 |
| rosa_laevigata | RLG00000031528 |
| rosa_multiflora | Rmu_sc0007348.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00068450 |
| rosa_rugosa | Rorug04G0432600 |
| rosa_samantha | Rh5AG060700 Rh5BG057500 Rh5CG067600 Rh5DG056700 |
| rosa_wichuraiana | Rw5G005990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 911, 2698 |
| Acc36I | ACCTGC | 6 cut(s) | 911, 1046, 1629, 2698, 2953, 2980 |
| AccB1I | GGYRCC | 2 cut(s) | 1456, 2570 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1242 |
| AccBSI | CCGCTC | 1 cut(s) | 3658 |
| AccI | GTMKAC | 2 cut(s) | 12, 1498 |
| AccIII | TCCGGA | 1 cut(s) | 3325 |
| AclI | AACGTT | 1 cut(s) | 1758 |
| AcoI | YGGCCR | 3 cut(s) | 728, 2418, 3437 |
| AcsI | RAATTY | 5 cut(s) | 318, 692, 715, 733, 1186 |
| AcuI | CTGAAG | 3 cut(s) | 2316, 3300, 3594 |
| AcvI | CACGTG | 1 cut(s) | 1242 |
| AcyI | GRCGYC | 1 cut(s) | 153 |
| AdeI | CACNNNGTG | 2 cut(s) | 1242, 1997 |
| AflIII | ACRYGT | 2 cut(s) | 1326, 1861 |
| AhlI | ACTAGT | 1 cut(s) | 3635 |
| AjnI | CCWGG | 6 cut(s) | 203, 970, 2680, 2836, 2845, 3081 |
| AleI | CACNNNNGTG | 2 cut(s) | 823, 3491 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 3702 |
| Alw26I | GTCTC | 2 cut(s) | 792, 3656 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 770, 1814, 3681 |
| Ama87I | CYCGRG | 2 cut(s) | 1281, 2925 |
| Aor13HI | TCCGGA | 1 cut(s) | 3325 |
| ApoI | RAATTY | 5 cut(s) | 318, 692, 715, 733, 1186 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 659, 691 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 693 |
| AspLEI | GCGC | 3 cut(s) | 857, 2394, 3450 |
| AsuC2I | CCSGG | 1 cut(s) | 3217 |
| AsuHPI | GGTGA | 6 cut(s) | 444, 618, 1517, 1685, 2282, 3043 |
| AvaI | CYCGRG | 2 cut(s) | 1281, 2925 |
| AvaII | GGWCC | 9 cut(s) | 207, 1024, 1352, 1721, 1837, 2096, 2522, 2636, 2969 |
| AxyI | CCTNAGG | 1 cut(s) | 1209 |
| BaeGI | GKGCMC | 1 cut(s) | 2610 |
| BalI | TGGCCA | 2 cut(s) | 730, 2420 |
| BanI | GGYRCC | 2 cut(s) | 1456, 2570 |
| BanII | GRGCYC | 6 cut(s) | 33, 123, 195, 1208, 2845, 3427 |
| BauI | CACGAG | 2 cut(s) | 423, 468 |
| BbrPI | CACGTG | 1 cut(s) | 1242 |
| BbsI | GAAGAC | 4 cut(s) | 156, 172, 1571, 3563 |
| BbvCI | CCTCAGC | 1 cut(s) | 2832 |
| BceAI | ACGGC | 2 cut(s) | 161, 3617 |
| BciT130I | CCWGG | 6 cut(s) | 205, 972, 2682, 2838, 2847, 3083 |
| BciVI | GTATCC | 1 cut(s) | 3008 |
| BcnI | CCSGG | 1 cut(s) | 3217 |
| BcoDI | GTCTC | 2 cut(s) | 792, 3656 |
| BcuI | ACTAGT | 1 cut(s) | 3635 |
| BfmI | CTRYAG | 4 cut(s) | 813, 1215, 1260, 2946 |
| BfoI | RGCGCY | 2 cut(s) | 858, 2395 |
| BfuAI | ACCTGC | 6 cut(s) | 911, 1046, 1629, 2698, 2953, 2980 |
| BfuI | GTATCC | 1 cut(s) | 3008 |
| BlpI | GCTNAGC | 1 cut(s) | 1807 |
| BmcAI | AGTACT | 1 cut(s) | 811 |
| Bme1390I | CCNGG | 7 cut(s) | 205, 972, 2682, 2838, 2847, 3083, 3217 |
| Bme18I | GGWCC | 9 cut(s) | 207, 1024, 1352, 1721, 1837, 2096, 2522, 2636, 2969 |
| BmeT110I | CYCGRG | 2 cut(s) | 1281, 2925 |
| BmiI | GGNNCC | 7 cut(s) | 1025, 1026, 1353, 1458, 2572, 2844, 3424 |
| BmrFI | CCNGG | 7 cut(s) | 205, 972, 2682, 2838, 2847, 3083, 3217 |
| BmrI | ACTGGG | 2 cut(s) | 2799, 3374 |
| BmuI | ACTGGG | 2 cut(s) | 2799, 3374 |
| BpiI | GAAGAC | 4 cut(s) | 156, 172, 1571, 3563 |
| BpmI | CTGGAG | 3 cut(s) | 1161, 1272, 3258 |
| Bpu10I | CCTNAGC | 2 cut(s) | 237, 2832 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1807 |
| BpuEI | CTTGAG | 2 cut(s) | 179, 510 |
| BpuMI | CCSGG | 1 cut(s) | 3217 |
| BsaAI | YACGTR | 4 cut(s) | 548, 994, 1242, 1862 |
| BsaHI | GRCGYC | 1 cut(s) | 153 |
| BsaI | GGTCTC | 1 cut(s) | 792 |
| BsaWI | WCCGGW | 2 cut(s) | 2905, 3325 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 143, 173, 2476, 2506, 3653, 3683 |
| Bse1I | ACTGG | 7 cut(s) | 1178, 1403, 2449, 2794, 3098, 3380, 3565 |
| Bse21I | CCTNAGG | 1 cut(s) | 1209 |
| Bse3DI | GCAATG | 9 cut(s) | 988, 1024, 1168, 1296, 2034, 2166, 2307, 2574, 3092 |
| BseAI | TCCGGA | 1 cut(s) | 3325 |
| BseBI | CCWGG | 6 cut(s) | 205, 972, 2682, 2838, 2847, 3083 |
| BseMI | GCAATG | 9 cut(s) | 988, 1024, 1168, 1296, 2034, 2166, 2307, 2574, 3092 |
| BseNI | ACTGG | 7 cut(s) | 1178, 1403, 2449, 2794, 3098, 3380, 3565 |
| BseRI | GAGGAG | 4 cut(s) | 148, 411, 2924, 3041 |
| BseSI | GKGCMC | 1 cut(s) | 2610 |
| BseYI | CCCAGC | 4 cut(s) | 32, 857, 1383, 3681 |
| BsgI | GTGCAG | 2 cut(s) | 414, 2781 |
| BshNI | GGYRCC | 2 cut(s) | 1456, 2570 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1281, 2925 |
| BsiSI | CCGG | 3 cut(s) | 2906, 3217, 3326 |
| BslFI | GGGAC | 4 cut(s) | 218, 858, 1010, 1332 |
| BsmAI | GTCTC | 2 cut(s) | 792, 3656 |
| BsmFI | GGGAC | 4 cut(s) | 218, 858, 1010, 1332 |
| BsmI | GAATGC | 1 cut(s) | 289 |
| Bso31I | GGTCTC | 1 cut(s) | 792 |
| BsoBI | CYCGRG | 2 cut(s) | 1281, 2925 |
| Bsp1286I | GDGCHC | 7 cut(s) | 33, 123, 195, 1208, 2610, 2845, 3427 |
| Bsp13I | TCCGGA | 1 cut(s) | 3325 |
| Bsp1407I | TGTACA | 1 cut(s) | 1988 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1807 |
| Bsp19I | CCATGG | 1 cut(s) | 2255 |
| BspEI | TCCGGA | 1 cut(s) | 3325 |
| BspHI | TCATGA | 1 cut(s) | 3373 |
| BspLI | GGNNCC | 7 cut(s) | 1025, 1026, 1353, 1458, 2572, 2844, 3424 |
| BspMAI | CTGCAG | 4 cut(s) | 817, 1219, 1264, 2950 |
| BspMI | ACCTGC | 6 cut(s) | 911, 1046, 1629, 2698, 2953, 2980 |
| BspQI | GCTCTTC | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 2 cut(s) | 1456, 2570 |
| BspTNI | GGTCTC | 1 cut(s) | 792 |
| BsrBI | CCGCTC | 1 cut(s) | 3658 |
| BsrDI | GCAATG | 9 cut(s) | 988, 1024, 1168, 1296, 2034, 2166, 2307, 2574, 3092 |
| BsrGI | TGTACA | 1 cut(s) | 1988 |
| BsrI | ACTGG | 7 cut(s) | 1178, 1403, 2449, 2794, 3098, 3380, 3565 |
| BssNAI | GTATAC | 1 cut(s) | 1499 |
| BssNI | GRCGYC | 1 cut(s) | 153 |
| BssSI | CACGAG | 2 cut(s) | 423, 468 |
| BssT1I | CCWWGG | 4 cut(s) | 976, 2255, 3314, 3625 |
| Bst1107I | GTATAC | 1 cut(s) | 1499 |
| Bst2BI | CACGAG | 2 cut(s) | 423, 468 |
| Bst2UI | CCWGG | 6 cut(s) | 205, 972, 2682, 2838, 2847, 3083 |
| Bst4CI | ACNGT | 9 cut(s) | 630, 949, 1159, 1471, 1829, 1841, 2030, 2091, 3163 |
| Bst6I | CTCTTC | 3 cut(s) | 111, 2070, 3276 |
| BstACI | GRCGYC | 1 cut(s) | 153 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1775, 3211 |
| BstAUI | TGTACA | 1 cut(s) | 1988 |
| BstBAI | YACGTR | 4 cut(s) | 548, 994, 1242, 1862 |
| BstDSI | CCRYGG | 2 cut(s) | 2255, 3427 |
| BstEII | GGTNACC | 1 cut(s) | 450 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 525 |
| BstH2I | RGCGCY | 2 cut(s) | 858, 2395 |
| BstHHI | GCGC | 3 cut(s) | 857, 2394, 3450 |
| BstMAI | GTCTC | 2 cut(s) | 792, 3656 |
| BstNI | CCWGG | 6 cut(s) | 205, 972, 2682, 2838, 2847, 3083 |
| BstNSI | RCATGY | 4 cut(s) | 1330, 2176, 2200, 2824 |
| BstPI | GGTNACC | 1 cut(s) | 450 |
| BstSCI | CCNGG | 7 cut(s) | 203, 970, 2680, 2836, 2845, 3081, 3215 |
| BstSFI | CTRYAG | 4 cut(s) | 813, 1215, 1260, 2946 |
| BstSLI | GKGCMC | 1 cut(s) | 2610 |
| BstV2I | GAAGAC | 4 cut(s) | 156, 172, 1571, 3563 |
| BstX2I | RGATCY | 3 cut(s) | 1247, 1763, 3058 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 348, 1050 |
| BstYI | RGATCY | 3 cut(s) | 1247, 1763, 3058 |
| BstZ17I | GTATAC | 1 cut(s) | 1499 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1209 |
| BsuI | GTATCC | 1 cut(s) | 3008 |
| BtgI | CCRYGG | 2 cut(s) | 2255, 3427 |
| BtsIMutI | CAGTG | 4 cut(s) | 1156, 2035, 2442, 2638 |
| BveI | ACCTGC | 6 cut(s) | 911, 1046, 1629, 2698, 2953, 2980 |
| CaiI | CAGNNNCTG | 3 cut(s) | 770, 1814, 3681 |
| CciI | TCATGA | 1 cut(s) | 3373 |
| CfoI | GCGC | 3 cut(s) | 857, 2394, 3450 |
| CseI | GACGC | 2 cut(s) | 161, 220 |
| CsiI | ACCWGGT | 1 cut(s) | 3081 |
| DraI | TTTAAA | 2 cut(s) | 1519, 1851 |
| DraIII | CACNNNGTG | 2 cut(s) | 1242, 1997 |
| EaeI | YGGCCR | 3 cut(s) | 728, 2418, 3437 |
| Eam1104I | CTCTTC | 3 cut(s) | 111, 2070, 3276 |
| EarI | CTCTTC | 3 cut(s) | 111, 2070, 3276 |
| EciI | GGCGGA | 1 cut(s) | 163 |
| Eco130I | CCWWGG | 4 cut(s) | 976, 2255, 3314, 3625 |
| Eco24I | GRGCYC | 6 cut(s) | 33, 123, 195, 1208, 2845, 3427 |
| Eco31I | GGTCTC | 1 cut(s) | 792 |
| Eco47I | GGWCC | 9 cut(s) | 207, 1024, 1352, 1721, 1837, 2096, 2522, 2636, 2969 |
| Eco57I | CTGAAG | 3 cut(s) | 2316, 3300, 3594 |
| Eco72I | CACGTG | 1 cut(s) | 1242 |
| Eco81I | CCTNAGG | 1 cut(s) | 1209 |
| Eco88I | CYCGRG | 2 cut(s) | 1281, 2925 |
| Eco91I | GGTNACC | 1 cut(s) | 450 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 525 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1024, 1352, 2969 |
| EcoO65I | GGTNACC | 1 cut(s) | 450 |
| EcoRI | GAATTC | 2 cut(s) | 318, 715 |
| EcoRII | CCWGG | 6 cut(s) | 203, 970, 2680, 2836, 2845, 3081 |
| EcoT14I | CCWWGG | 4 cut(s) | 976, 2255, 3314, 3625 |
| EcoT38I | GRGCYC | 6 cut(s) | 33, 123, 195, 1208, 2845, 3427 |
| ErhI | CCWWGG | 4 cut(s) | 976, 2255, 3314, 3625 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 646, 678, 833, 865 |
| FaqI | GGGAC | 4 cut(s) | 218, 858, 1010, 1332 |
| FauI | CCCGC | 4 cut(s) | 266, 1694, 1882, 3651 |
| FauNDI | CATATG | 2 cut(s) | 1198, 3201 |
| FblI | GTMKAC | 2 cut(s) | 12, 1498 |
| FriOI | GRGCYC | 6 cut(s) | 33, 123, 195, 1208, 2845, 3427 |
| GlaI | GCGC | 3 cut(s) | 856, 2393, 3449 |
| GsaI | CCCAGC | 4 cut(s) | 36, 861, 1387, 3685 |
| GsuI | CTGGAG | 3 cut(s) | 1161, 1272, 3258 |
| HaeII | RGCGCY | 2 cut(s) | 858, 2395 |
| HapII | CCGG | 3 cut(s) | 2906, 3217, 3326 |
| HgaI | GACGC | 2 cut(s) | 161, 220 |
| HhaI | GCGC | 3 cut(s) | 857, 2394, 3450 |
| Hin1I | GRCGYC | 1 cut(s) | 153 |
| Hin6I | GCGC | 3 cut(s) | 855, 2392, 3448 |
| HinP1I | GCGC | 3 cut(s) | 855, 2392, 3448 |
| HincII | GTYRAC | 3 cut(s) | 13, 678, 1741 |
| HindII | GTYRAC | 3 cut(s) | 13, 678, 1741 |
| HindIII | AAGCTT | 1 cut(s) | 2556 |
| HpaII | CCGG | 3 cut(s) | 2906, 3217, 3326 |
| HphI | GGTGA | 6 cut(s) | 444, 618, 1517, 1685, 2282, 3043 |
| Hpy99I | CGWCG | 4 cut(s) | 17, 29, 134, 137 |
| HpyCH4III | ACNGT | 9 cut(s) | 630, 949, 1159, 1471, 1829, 1841, 2030, 2091, 3163 |
| HpyCH4IV | ACGT | 9 cut(s) | 547, 915, 993, 1241, 1758, 1861, 1913, 1921, 2343 |
| HpySE526I | ACGT | 9 cut(s) | 547, 915, 993, 1241, 1758, 1861, 1913, 1921, 2343 |
| Hsp92I | GRCGYC | 1 cut(s) | 153 |
| HspAI | GCGC | 3 cut(s) | 855, 2392, 3448 |
| KflI | GGGWCCC | 1 cut(s) | 1024 |
| Kpn2I | TCCGGA | 1 cut(s) | 3325 |
| LguI | GCTCTTC | 1 cut(s) | 111 |
| LmnI | GCTCC | 4 cut(s) | 222, 1783, 2848, 3422 |
| MabI | ACCWGGT | 1 cut(s) | 3081 |
| MaeII | ACGT | 9 cut(s) | 547, 915, 993, 1241, 1758, 1861, 1913, 1921, 2343 |
| MbiI | CCGCTC | 1 cut(s) | 3658 |
| MfeI | CAATTG | 5 cut(s) | 48, 930, 1048, 1770, 1926 |
| MflI | RGATCY | 3 cut(s) | 1247, 1763, 3058 |
| MhlI | GDGCHC | 7 cut(s) | 33, 123, 195, 1208, 2610, 2845, 3427 |
| MlsI | TGGCCA | 2 cut(s) | 730, 2420 |
| MluNI | TGGCCA | 2 cut(s) | 730, 2420 |
| MlyI | GAGTC | 6 cut(s) | 13, 508, 840, 1608, 1957, 2923 |
| MmeI | TCCRAC | 3 cut(s) | 1301, 1741, 1939 |
| Mox20I | TGGCCA | 2 cut(s) | 730, 2420 |
| MroI | TCCGGA | 1 cut(s) | 3325 |
| MroXI | GAANNNNTTC | 1 cut(s) | 693 |
| MscI | TGGCCA | 2 cut(s) | 730, 2420 |
| MseI | TTAA | 5 cut(s) | 408, 1518, 1755, 1850, 3482 |
| MslI | CAYNNNNRTG | 7 cut(s) | 823, 1671, 1912, 2549, 3053, 3128, 3491 |
| Msp20I | TGGCCA | 2 cut(s) | 730, 2420 |
| MspA1I | CMGCKG | 4 cut(s) | 1535, 1877, 3278, 3681 |
| MspI | CCGG | 3 cut(s) | 2906, 3217, 3326 |
| MspR9I | CCNGG | 7 cut(s) | 205, 972, 2682, 2838, 2847, 3083, 3217 |
| MunI | CAATTG | 5 cut(s) | 48, 930, 1048, 1770, 1926 |
| Mva1269I | GAATGC | 1 cut(s) | 289 |
| MvaI | CCWGG | 6 cut(s) | 205, 972, 2682, 2838, 2847, 3083 |
| NciI | CCSGG | 1 cut(s) | 3217 |
| NcoI | CCATGG | 1 cut(s) | 2255 |
| NdeI | CATATG | 2 cut(s) | 1198, 3201 |
| NlaIV | GGNNCC | 7 cut(s) | 1025, 1026, 1353, 1458, 2572, 2844, 3424 |
| NmeAIII | GCCGAG | 2 cut(s) | 3171, 3465 |
| NmuCI | GTSAC | 4 cut(s) | 450, 624, 964, 1523 |
| NspI | RCATGY | 4 cut(s) | 1330, 2176, 2200, 2824 |
| OliI | CACNNNNGTG | 2 cut(s) | 823, 3491 |
| PagI | TCATGA | 1 cut(s) | 3373 |
| PaqCI | CACCTGC | 2 cut(s) | 911, 2698 |
| PciI | ACATGT | 1 cut(s) | 1326 |
| PciSI | GCTCTTC | 1 cut(s) | 111 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 21, 159 |
| PctI | GAATGC | 1 cut(s) | 289 |
| PdmI | GAANNNNTTC | 1 cut(s) | 693 |
| PflFI | GACNNNGTC | 1 cut(s) | 3380 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1242 |
| PfoI | TCCNGGA | 1 cut(s) | 2680 |
| PleI | GAGTC | 6 cut(s) | 12, 508, 840, 1607, 1956, 2922 |
| PmaCI | CACGTG | 1 cut(s) | 1242 |
| PmlI | CACGTG | 1 cut(s) | 1242 |
| PpsI | GAGTC | 6 cut(s) | 12, 508, 840, 1607, 1956, 2922 |
| Ppu21I | YACGTR | 4 cut(s) | 548, 994, 1242, 1862 |
| PpuMI | RGGWCCY | 3 cut(s) | 1024, 1352, 2969 |
| PscI | ACATGT | 1 cut(s) | 1326 |
| Psp1406I | AACGTT | 1 cut(s) | 1758 |
| Psp5II | RGGWCCY | 3 cut(s) | 1024, 1352, 2969 |
| Psp6I | CCWGG | 6 cut(s) | 203, 970, 2680, 2836, 2845, 3081 |
| PspCI | CACGTG | 1 cut(s) | 1242 |
| PspEI | GGTNACC | 1 cut(s) | 450 |
| PspFI | CCCAGC | 4 cut(s) | 32, 857, 1383, 3681 |
| PspGI | CCWGG | 6 cut(s) | 203, 970, 2680, 2836, 2845, 3081 |
| PspN4I | GGNNCC | 7 cut(s) | 1025, 1026, 1353, 1458, 2572, 2844, 3424 |
| PspPPI | RGGWCCY | 3 cut(s) | 1024, 1352, 2969 |
| PstI | CTGCAG | 4 cut(s) | 817, 1219, 1264, 2950 |
| PstNI | CAGNNNCTG | 3 cut(s) | 770, 1814, 3681 |
| PsuI | RGATCY | 3 cut(s) | 1247, 1763, 3058 |
| PsyI | GACNNNGTC | 1 cut(s) | 3380 |
| PvuII | CAGCTG | 2 cut(s) | 1535, 3278 |
| RseI | CAYNNNNRTG | 7 cut(s) | 823, 1671, 1912, 2549, 3053, 3128, 3491 |
| SalI | GTCGAC | 1 cut(s) | 11 |
| SapI | GCTCTTC | 1 cut(s) | 111 |
| SaqAI | TTAA | 5 cut(s) | 408, 1518, 1755, 1850, 3482 |
| ScaI | AGTACT | 1 cut(s) | 811 |
| SchI | GAGTC | 6 cut(s) | 13, 508, 840, 1608, 1957, 2923 |
| ScrFI | CCNGG | 7 cut(s) | 205, 972, 2682, 2838, 2847, 3083, 3217 |
| SduI | GDGCHC | 7 cut(s) | 33, 123, 195, 1208, 2610, 2845, 3427 |
| SexAI | ACCWGGT | 1 cut(s) | 3081 |
| SfcI | CTRYAG | 4 cut(s) | 813, 1215, 1260, 2946 |
| SinI | GGWCC | 9 cut(s) | 207, 1024, 1352, 1721, 1837, 2096, 2522, 2636, 2969 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 823, 1671, 1912, 2549, 3053, 3128, 3491 |
| SmlI | CTYRAG | 2 cut(s) | 194, 525 |
| SmoI | CTYRAG | 2 cut(s) | 194, 525 |
| SpeI | ACTAGT | 1 cut(s) | 3635 |
| SspI | AATATT | 2 cut(s) | 1422, 2332 |
| StyD4I | CCNGG | 7 cut(s) | 203, 970, 2680, 2836, 2845, 3081, 3215 |
| StyI | CCWWGG | 4 cut(s) | 976, 2255, 3314, 3625 |
| TaaI | ACNGT | 9 cut(s) | 630, 949, 1159, 1471, 1829, 1841, 2030, 2091, 3163 |
| TaiI | ACGT | 9 cut(s) | 550, 918, 996, 1244, 1761, 1864, 1916, 1924, 2346 |
| TaqI | TCGA | 5 cut(s) | 12, 1648, 1793, 3384, 3721 |
| TatI | WGTACW | 3 cut(s) | 809, 1988, 3163 |
| TauI | GCSGC | 4 cut(s) | 2392, 3120, 3136, 3681 |
| Tru1I | TTAA | 5 cut(s) | 408, 1518, 1755, 1850, 3482 |
| Tru9I | TTAA | 5 cut(s) | 408, 1518, 1755, 1850, 3482 |
| TscAI | CASTG | 4 cut(s) | 1156, 2035, 2449, 2638 |
| TseFI | GTSAC | 4 cut(s) | 450, 624, 964, 1523 |
| Tsp45I | GTSAC | 4 cut(s) | 450, 624, 964, 1523 |
| TspGWI | ACGGA | 4 cut(s) | 151, 1384, 3310, 3544 |
| TspRI | CASTG | 4 cut(s) | 1156, 2035, 2449, 2638 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3380 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1242 |
| VpaK11BI | GGWCC | 9 cut(s) | 207, 1024, 1352, 1721, 1837, 2096, 2522, 2636, 2969 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 525 |
| XapI | RAATTY | 5 cut(s) | 318, 692, 715, 733, 1186 |
| XbaI | TCTAGA | 3 cut(s) | 2104, 2167, 3343 |
| XceI | RCATGY | 4 cut(s) | 1330, 2176, 2200, 2824 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1757, 3282 |
| XmiI | GTMKAC | 2 cut(s) | 12, 1498 |
| XmnI | GAANNNNTTC | 1 cut(s) | 693 |
| ZrmI | AGTACT | 1 cut(s) | 811 |