Rab subfamily of small GTPases
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G09720 AT4G09720 AT4G09720 AT4G09720 AT4G09720 AT4G09720 |
| fragaria_vesca | FvH4_2g12800 |
| malus_domestica | MD10G1038200.v1.1 |
| prunus_persica | Prupe.8G044200_v2.0.a1 |
| pyrus_communis | pycom05g02660 pycom10g02620 |
| rosa_chinensis | RchiOBHm_Chr6g0273691 |
| rosa_laevigata | RLG00000013599 |
| rosa_multiflora | Rmu_sc0021426.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00195120 |
| rosa_rugosa | Rorug06G0077300 |
| rosa_samantha | Rh6AG191600 Rh6BG195700 Rh6CG195200 |
| rosa_wichuraiana | Rw6G016770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 491 |
| AciI | CCGC | 2 cut(s) | 525, 603 |
| AclWI | GGATC | 1 cut(s) | 335 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 19 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 602 |
| AgsI | TTSAA | 2 cut(s) | 444, 490 |
| AluBI | AGCT | 4 cut(s) | 148, 166, 242, 428 |
| AluI | AGCT | 4 cut(s) | 148, 166, 242, 428 |
| Alw26I | GTCTC | 2 cut(s) | 415, 461 |
| AlwI | GGATC | 1 cut(s) | 335 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 584 |
| ApeKI | GCWGC | 2 cut(s) | 224, 425 |
| AspLEI | GCGC | 1 cut(s) | 614 |
| AsuHPI | GGTGA | 1 cut(s) | 56 |
| BbsI | GAAGAC | 1 cut(s) | 19 |
| BbvI | GCAGC | 2 cut(s) | 211, 437 |
| BccI | CCATC | 2 cut(s) | 343, 383 |
| BciVI | GTATCC | 1 cut(s) | 181 |
| BcoDI | GTCTC | 2 cut(s) | 415, 461 |
| BfuI | GTATCC | 1 cut(s) | 181 |
| BisI | GCNGC | 2 cut(s) | 225, 426 |
| BlsI | GCNGC | 2 cut(s) | 226, 427 |
| BmsI | GCATC | 1 cut(s) | 565 |
| BpiI | GAAGAC | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 11 |
| BsaI | GGTCTC | 1 cut(s) | 415 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 141, 562 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 602 |
| Bse1I | ACTGG | 1 cut(s) | 437 |
| Bse3DI | GCAATG | 1 cut(s) | 513 |
| BseDI | CCNNGG | 3 cut(s) | 40, 141, 562 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 602 |
| BseMI | GCAATG | 1 cut(s) | 513 |
| BseNI | ACTGG | 1 cut(s) | 437 |
| BseRI | GAGGAG | 2 cut(s) | 252, 326 |
| BseXI | GCAGC | 2 cut(s) | 211, 437 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 602 |
| BsmAI | GTCTC | 2 cut(s) | 415, 461 |
| BsmI | GAATGC | 1 cut(s) | 503 |
| Bso31I | GGTCTC | 1 cut(s) | 415 |
| Bsp143I | GATC | 1 cut(s) | 340 |
| BspACI | CCGC | 2 cut(s) | 525, 603 |
| BspPI | GGATC | 1 cut(s) | 335 |
| BspTNI | GGTCTC | 1 cut(s) | 415 |
| BsrDI | GCAATG | 1 cut(s) | 513 |
| BsrI | ACTGG | 1 cut(s) | 437 |
| BssECI | CCNNGG | 3 cut(s) | 40, 141, 562 |
| BssMI | GATC | 1 cut(s) | 340 |
| BssT1I | CCWWGG | 2 cut(s) | 141, 562 |
| Bst4CI | ACNGT | 1 cut(s) | 50 |
| BstC8I | GCNNGC | 1 cut(s) | 616 |
| BstHHI | GCGC | 1 cut(s) | 614 |
| BstKTI | GATC | 1 cut(s) | 343 |
| BstMAI | GTCTC | 2 cut(s) | 415, 461 |
| BstMBI | GATC | 1 cut(s) | 340 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 524, 609 |
| BstV1I | GCAGC | 2 cut(s) | 211, 437 |
| BstV2I | GAAGAC | 1 cut(s) | 19 |
| BstX2I | RGATCY | 1 cut(s) | 340 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 218 |
| BstYI | RGATCY | 1 cut(s) | 340 |
| BsuI | GTATCC | 1 cut(s) | 181 |
| BtsI | GCAGTG | 1 cut(s) | 585 |
| BtsIMutI | CAGTG | 2 cut(s) | 55, 585 |
| Cac8I | GCNNGC | 1 cut(s) | 616 |
| CaiI | CAGNNNCTG | 1 cut(s) | 584 |
| CfoI | GCGC | 1 cut(s) | 614 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CviAII | CATG | 2 cut(s) | 308, 542 |
| CviJI | RGCY | 5 cut(s) | 148, 166, 242, 428, 595 |
| CviKI_1 | RGCY | 5 cut(s) | 148, 166, 242, 428, 595 |
| CviQI | GTAC | 1 cut(s) | 18 |
| DpnI | GATC | 1 cut(s) | 342 |
| DpnII | GATC | 1 cut(s) | 340 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 491 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 491 |
| Eco130I | CCWWGG | 2 cut(s) | 141, 562 |
| Eco31I | GGTCTC | 1 cut(s) | 415 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| EcoT14I | CCWWGG | 2 cut(s) | 141, 562 |
| ErhI | CCWWGG | 2 cut(s) | 141, 562 |
| FaeI | CATG | 2 cut(s) | 311, 545 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 36 |
| FatI | CATG | 2 cut(s) | 307, 541 |
| Fnu4HI | GCNGC | 2 cut(s) | 225, 426 |
| Fsp4HI | GCNGC | 2 cut(s) | 225, 426 |
| GlaI | GCGC | 1 cut(s) | 613 |
| GluI | GCNGC | 2 cut(s) | 225, 426 |
| HhaI | GCGC | 1 cut(s) | 614 |
| Hin1II | CATG | 2 cut(s) | 311, 545 |
| Hin6I | GCGC | 1 cut(s) | 612 |
| HinP1I | GCGC | 1 cut(s) | 612 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 3 cut(s) | 76, 207, 214 |
| HphI | GGTGA | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 3 cut(s) | 153, 340, 415 |
| Hpy188III | TCNNGA | 3 cut(s) | 211, 296, 466 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyCH4III | ACNGT | 1 cut(s) | 50 |
| HpyCH4IV | ACGT | 2 cut(s) | 16, 384 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 106, 578 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 524, 609 |
| HpySE526I | ACGT | 2 cut(s) | 16, 384 |
| Hsp92II | CATG | 2 cut(s) | 311, 545 |
| HspAI | GCGC | 1 cut(s) | 612 |
| Kzo9I | GATC | 1 cut(s) | 340 |
| LmnI | GCTCC | 3 cut(s) | 145, 239, 396 |
| LpnPI | CCDG | 6 cut(s) | 180, 224, 311, 418, 533, 585 |
| Lsp1109I | GCAGC | 2 cut(s) | 211, 437 |
| LweI | GCATC | 1 cut(s) | 565 |
| MaeII | ACGT | 2 cut(s) | 16, 384 |
| MaeIII | GTNAC | 5 cut(s) | 44, 136, 169, 449, 580 |
| MalI | GATC | 1 cut(s) | 342 |
| MboI | GATC | 1 cut(s) | 340 |
| MboII | GAAGA | 1 cut(s) | 24 |
| MflI | RGATCY | 1 cut(s) | 340 |
| MlyI | GAGTC | 1 cut(s) | 223 |
| MmeI | TCCRAC | 1 cut(s) | 37 |
| MnlI | CCTC | 7 cut(s) | 50, 76, 230, 273, 304, 386, 493 |
| MseI | TTAA | 3 cut(s) | 270, 321, 509 |
| MspA1I | CMGCKG | 1 cut(s) | 428 |
| Mva1269I | GAATGC | 1 cut(s) | 503 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 524, 609 |
| NdeII | GATC | 1 cut(s) | 340 |
| NlaIII | CATG | 2 cut(s) | 311, 545 |
| NmuCI | GTSAC | 2 cut(s) | 44, 580 |
| PctI | GAATGC | 1 cut(s) | 503 |
| PfeI | GAWTC | 2 cut(s) | 76, 207 |
| PkrI | GCNGC | 2 cut(s) | 226, 427 |
| PleI | GAGTC | 1 cut(s) | 222 |
| PpsI | GAGTC | 1 cut(s) | 222 |
| PstNI | CAGNNNCTG | 1 cut(s) | 584 |
| PsuI | RGATCY | 1 cut(s) | 340 |
| PvuII | CAGCTG | 1 cut(s) | 428 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| SaqAI | TTAA | 3 cut(s) | 270, 321, 509 |
| SatI | GCNGC | 2 cut(s) | 225, 426 |
| Sau3AI | GATC | 1 cut(s) | 340 |
| SchI | GAGTC | 1 cut(s) | 223 |
| SetI | ASST | 9 cut(s) | 19, 33, 68, 150, 168, 244, 284, 387, 430 |
| SfaNI | GCATC | 1 cut(s) | 565 |
| SmlI | CTYRAG | 1 cut(s) | 26 |
| SmoI | CTYRAG | 1 cut(s) | 26 |
| SsiI | CCGC | 2 cut(s) | 525, 603 |
| StyI | CCWWGG | 2 cut(s) | 141, 562 |
| TaaI | ACNGT | 1 cut(s) | 50 |
| TaiI | ACGT | 2 cut(s) | 19, 387 |
| TaqI | TCGA | 3 cut(s) | 297, 465, 495 |
| TfiI | GAWTC | 2 cut(s) | 76, 207 |
| Tru1I | TTAA | 3 cut(s) | 270, 321, 509 |
| Tru9I | TTAA | 3 cut(s) | 270, 321, 509 |
| TscAI | CASTG | 2 cut(s) | 55, 585 |
| TseFI | GTSAC | 2 cut(s) | 44, 580 |
| TseI | GCWGC | 2 cut(s) | 224, 425 |
| Tsp45I | GTSAC | 2 cut(s) | 44, 580 |
| TspDTI | ATGAA | 2 cut(s) | 89, 558 |
| TspGWI | ACGGA | 1 cut(s) | 345 |
| TspRI | CASTG | 2 cut(s) | 55, 585 |