AT4G09980

Belongs to the MT-A70-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0005856
Physical Location & Seq
Reverse (-)
6247735 .. 6252314
4580 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G09980.2

Sequence Viewer

Length: 2892 bp
ATGAAGAAGAAACAAGAAGAGAGTTCGTTGGAGAAGCTAAGTACTTGGTATCAAGATGGAGAGCAAGACGGTGGAGATAGAAGTGAGAAGAGAAGAATGAGTCTTAAAGCATCAGACTTTGAGAGTAGTTCTCGAAGTGGTGGAAGTAAAAGCAAAGAAGATAATAAGTCTGTTGTTGATGTTGAGCATCAAGATCGTGATTCCAAGAGAGAAAGAGATGGGAGAGAACGAACACATGGATCTTCTTCTGATTCGAGTAAGAGGAAGAGATGGGATGAAGCAGGTGGTCTTGTTAATGATGGTGATCATAAAAGTAGTAAGCTTTCTGATTCTAGACATGATAGTGGTGGAGAAAGAGTTAGTGTTAGTAATGAACATGGTGAGAGTAGGAGAGATTTGAAGTCTGATAGGAGTTTGAAGACTAGTAGTAGAGATGAGAAGAGTAAGAGTCGTGGTGTGAAAGATGATGATAGAGGTAGTCCTTTGAAGAAAACTAGTGGTAAGGATGGTTCTGAGGTAGTTAGAGAAGTGGGTCGATCTAATAGGTCGAAAACACCGGATGCGGATTATGAGAAGGAGAAGTATAGTCGAAAAGATGAGAGGTCTAGAGGTAGGGATGATGGGTGGTCTGATAGGGATAGAGATCAAGAAGGTTTGAAGGATAATTGGAAGAGAAGGCATTCTAGTAGTGGTGATAAAGATCAGAAAGATGGGGACTTGCTTTATGATCGTGGTAGGGAACGGGAATTTCCTAGGCAAGGACGTGAAAGGAGTGAAGGAGAGAGGTCTCATGGTCGTTTGGGTGGGAGGAAAGATGGAAACAGGGGGGAAGCTGTTAAAGCTTTGTCCAGTGGTGGCGTTTCAAATGAGAATTATGATGTGATTGAGATACAAACCAAGCCACATGATTATGTCAGGGGAGAATCAGGACCCAACTTTGCTCGTATGACTGAATCTGGTCAGCAACCTCCTAAAAAACCTAGTAATAATGAGGAAGAGTGGGCTCACAACCAGGAAGGTAGACAGAGAAGTGAAACTTTTGGTTTTGGGTCTTATGGGGAAGATTCGAGAGATGAAGCTGGTGAAGCCAGTTCTGATTACTCAGGGGCTAAAGCAAGAAACCAGAGAGGTTCAACACCTGGTAGAACTAATTTTGTGCAAACCCCTAATCGTGGTTATCAGACTCCACAAGGCACTAGAGGGAACAGACCCTTAAGGGGTGGGAAAGGAAGACCTGCCGGTGGCAGAGAAAACCAACAAGGTGCCATTCCAATGCCTATCATGGGGTCACCATTTGCAAACCTTGGAATGCCACCACCCAGTCCCATTCATTCTCTTACTCCTGGCATGTCGCCAATTCCGGGCACTTCTGTCACCCCTGTCTTCATGCCTCCATTTGCCCCAACTCTTATATGGCCTGGGGCCCGAGGTGTTGATGGTAATATGCTACCTGTTCCTCCTGTTCTTTCACCTCTTCCTCCCGGACCATCAGGCCCAAGATTTCCTTCAATCGGCACACCACCAAACCCGAATATGTTCTTTACTCCACCAGGTTCTGATAGAGGAGGGCCTCCTAACTTTCCTGGGTCCAATATTTCTGGACAAATGGGACGTGGAATGCCATCTGATAAGACTTCAGGGGGATGGGTTCCTCCTCGAGGTGGTGGACCTCCTGGTAAAGCTCCTTCTAGGGGAGAGCAAAATGACTATTCCCAGAACTTTGTGGATACTGGAATGCGGCCCCAGAATTTCATTCGGGAGCTGGAGCTTACCAATGTGGAAGACTACCCCAAGCTTAGAGAGCTCATACAGAAGAAGGATGAGATTGTATCTAATTCTGCTTCTGCACCAATGTATCTGAAAGGCGACTTGCATGAAGTTGAGTTATCTCCCGAGTTATTTGGAACAAAGTTTGATGTTATTCTTGTTGACCCACCATGGGAGGAATATGTCCATAGAGCTCCTGGTGTTTCTGATAGTATGGAGTATTGGACATTTGAGGACATTATCAATCTCAAGATTGAGGCAATAGCTGACACTCCATCCTTCCTCTTCCTCTGGGTTGGTGATGGTGTTGGGCTTGAGCAAGGGCGCCAATGCCTGAAAAAGTGGGGTTTCAGAAGGTGTGAAGACATTTGCTGGGTGAAAACCAACAAAAGTAATGCAGCACCAACATTGCGACATGATTCTCGTACTGTGTTTCAGCGTTCCAAGGAGCACTGCTTGATGGGGATAAAGGGTACTGTTCGACGTAGCACTGATGGCCATATAATCCATGCTAACATCGACACTGACGTAATTATTGCTGAAGAGCCTCCTTATGGTTCGACTCAGAAGCCTGAAGATATGTATAGGATAATAGAGCATTTTGCACTTGGTCGCCGGAGGCTTGAGCTTTTCGGTGAAGACCACAATATTCGAGCTGGCTGGCTTACTGTTGGAAAAGGCCTTTCGTCCTCAAACTTTGAGCCACAGGCTTATGTGAGGAACTTCGCAGACAAGGAGGGTAAAGTGTGGCTAGGAGGAGGAGGAAGAAATCCACCTCCAGACGCACCGCATCTTGTTGTGACTACTCCCGATATAGAATCGCTGCGGCCCAAATCACCAATGAAGAATCAGCAACAACAATCGTATCCATCGTCTCTAGCTTCTGCAAATTCCTCAAACCGAAGAACCACAGGAAACTCACCACAAGCAAATCCTAATGTTGTTGTCTTACATCAAGAGGCTTCTGGATCTAACTTCTCTGTTCCTACCACCCCGCATTGGGTGCCACCAACGGCACCAGCTGCCGCAGGGCCACCTCCAATGGACAGCTTTAGAGTACCTGAAGGTGGCAACAACACAAGACCACCTGACGACAAGAGTTTTGACATGTACGGCTTTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MT-A70

Protein Analysis

963

Amino Acids

106.36

Weight (kDa)

8.47

Isoelectric Point (pI)

56.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MT-A70 PF05063 638 - 771 4.7e-37 MT-A70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 272
AbsI CCTCGAGG 1 cut(s) 1656
Acc36I ACCTGC 2 cut(s) 272, 1243
AccB1I GGYRCC 4 cut(s) 1262, 2091, 2770, 2782
AccI GTMKAC 1 cut(s) 1021
AciI CCGC 6 cut(s) 563, 1738, 2555, 2593, 2762, 2793
AclWI GGATC 2 cut(s) 247, 2743
AcoI YGGCCR 1 cut(s) 2263
AcsI RAATTY 3 cut(s) 746, 1747, 2656
AcuI CTGAAG 4 cut(s) 1620, 2328, 2361, 2850
AcyI GRCGYC 1 cut(s) 2092
AfaI GTAC 5 cut(s) 43, 2194, 2242, 2826, 2879
AflII CTTAAG 1 cut(s) 1213
AflIII ACRYGT 1 cut(s) 2874
AgsI TTSAA 7 cut(s) 400, 418, 487, 658, 864, 1134, 1509
AhlI ACTAGT 2 cut(s) 422, 494
AjiI CACGTC 2 cut(s) 764, 1613
AjnI CCWGG 8 cut(s) 1011, 1138, 1342, 1417, 1549, 1582, 1672, 1963
AjuI GAANNNNNNNTTGG 2 cut(s) 1489, 1521
Alw21I GWGCWC 3 cut(s) 1806, 1963, 2220
Alw26I GTCTC 2 cut(s) 792, 2646
AlwI GGATC 2 cut(s) 247, 2743
AlwNI CAGNNNCTG 1 cut(s) 1556
Ama87I CYCGRG 3 cut(s) 1425, 1656, 1892
AoxI GGCC 9 cut(s) 1415, 1422, 1492, 1568, 1739, 2263, 2446, 2594, 2798
ApaI GGGCCC 1 cut(s) 1426
ApeKI GCWGC 3 cut(s) 2165, 2590, 2789
ApoI RAATTY 3 cut(s) 746, 1747, 2656
ArsI GACNNNNNNTTYG 2 cut(s) 2852, 2884
Asp700I GAANNNNTTC 2 cut(s) 679, 1535
AspA2I CCTAGG 1 cut(s) 752
AspLEI GCGC 1 cut(s) 2094
AsuC2I CCSGG 2 cut(s) 1362, 1482
AvaI CYCGRG 3 cut(s) 1425, 1656, 1892
AvaII GGWCC 4 cut(s) 929, 1484, 1587, 1667
AvrII CCTAGG 1 cut(s) 752
BaeGI GKGCMC 2 cut(s) 1367, 1426
BaeI ACNNNNGTAYC 4 cut(s) 1838, 1871, 2615, 2648
BalI TGGCCA 1 cut(s) 2265
BanI GGYRCC 4 cut(s) 1262, 2091, 2770, 2782
BanII GRGCYC 4 cut(s) 1006, 1426, 1806, 1963
BarI GAAGNNNNNNTAC 2 cut(s) 1669, 1701
BbsI GAAGAC 6 cut(s) 425, 1237, 1375, 1788, 2136, 2412
Bbv12I GWGCWC 3 cut(s) 1806, 1963, 2220
BbvI GCAGC 3 cut(s) 2177, 2577, 2776
BceAI ACGGC 1 cut(s) 2796
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 8 cut(s) 1013, 1140, 1344, 1419, 1551, 1584, 1674, 1965
BciVI GTATCC 2 cut(s) 1720, 2643
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 2 cut(s) 1362, 1482
BcoDI GTCTC 2 cut(s) 792, 2646
BcuI ACTAGT 2 cut(s) 422, 494
BfoI RGCGCY 1 cut(s) 2095
BfrI CTTAAG 1 cut(s) 1213
BfuAI ACCTGC 2 cut(s) 272, 1243
BfuI GTATCC 2 cut(s) 1720, 2643
BisI GCNGC 6 cut(s) 1739, 2166, 2591, 2594, 2790, 2793
BlnI CCTAGG 1 cut(s) 752
BlsI GCNGC 6 cut(s) 1740, 2167, 2592, 2595, 2791, 2794
BmcAI AGTACT 1 cut(s) 43
Bme18I GGWCC 4 cut(s) 929, 1484, 1587, 1667
BmeT110I CYCGRG 3 cut(s) 1425, 1656, 1892
BmgBI CACGTC 2 cut(s) 764, 1613
BmrI ACTGGG 1 cut(s) 1314
BmsI GCATC 4 cut(s) 119, 196, 550, 2566
BmuI ACTGGG 1 cut(s) 1314
BpiI GAAGAC 6 cut(s) 425, 1237, 1375, 1788, 2136, 2412
BplI GAGNNNNNCTC 2 cut(s) 115, 147
BpmI CTGGAG 2 cut(s) 1784, 2529
BpuEI CTTGAG 3 cut(s) 2000, 2102, 2411
BpuMI CCSGG 2 cut(s) 1362, 1482
BsaBI GATNNNNATC 3 cut(s) 303, 642, 699
BsaHI GRCGYC 1 cut(s) 2092
BsaI GGTCTC 1 cut(s) 792
BsaJI CCNNGG 7 cut(s) 752, 1303, 1418, 1426, 1583, 1937, 2211
BsaWI WCCGGW 1 cut(s) 556
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bse118I RCCGGY 1 cut(s) 1238
Bse1I ACTGG 4 cut(s) 849, 1089, 1320, 1735
Bse3DI GCAATG 1 cut(s) 2174
Bse8I GATNNNNATC 3 cut(s) 303, 642, 699
BseBI CCWGG 8 cut(s) 1013, 1140, 1344, 1419, 1551, 1584, 1674, 1965
BseDI CCNNGG 7 cut(s) 752, 1303, 1418, 1426, 1583, 1937, 2211
BseGI GGATG 7 cut(s) 280, 511, 565, 622, 1649, 1825, 2042
BseJI GATNNNNATC 3 cut(s) 303, 642, 699
BseMI GCAATG 1 cut(s) 2174
BseMII CTCAG 3 cut(s) 504, 1116, 2345
BseNI ACTGG 4 cut(s) 849, 1089, 1320, 1735
BseRI GAGGAG 4 cut(s) 1578, 1644, 2538, 2541
BseSI GKGCMC 2 cut(s) 1367, 1426
BseXI GCAGC 3 cut(s) 2177, 2577, 2776
BseYI CCCAGC 1 cut(s) 2139
BsgI GTGCAG 1 cut(s) 1830
BshFI GGCC 9 cut(s) 1417, 1424, 1494, 1570, 1741, 2265, 2448, 2596, 2800
BshNI GGYRCC 4 cut(s) 1262, 2091, 2770, 2782
BsiHKAI GWGCWC 3 cut(s) 1806, 1963, 2220
BsiHKCI CYCGRG 3 cut(s) 1425, 1656, 1892
BsiSI CCGG 5 cut(s) 557, 1239, 1361, 1482, 2383
BslFI GGGAC 3 cut(s) 728, 1308, 1623
BsmAI GTCTC 2 cut(s) 792, 2646
BsmBI CGTCTC 1 cut(s) 2646
BsmFI GGGAC 3 cut(s) 728, 1308, 1623
BsmI GAATGC 4 cut(s) 679, 1314, 1623, 1740
BsnI GGCC 9 cut(s) 1417, 1424, 1494, 1570, 1741, 2265, 2448, 2596, 2800
Bso31I GGTCTC 1 cut(s) 792
BsoBI CYCGRG 3 cut(s) 1425, 1656, 1892
Bsp120I GGGCCC 1 cut(s) 1422
Bsp1286I GDGCHC 6 cut(s) 1006, 1367, 1426, 1806, 1963, 2220
Bsp143I GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
Bsp19I CCATGG 1 cut(s) 1937
BspACI CCGC 6 cut(s) 563, 1738, 2555, 2593, 2762, 2793
BspANI GGCC 9 cut(s) 1417, 1424, 1494, 1570, 1741, 2265, 2448, 2596, 2800
BspCNI CTCAG 3 cut(s) 505, 1115, 2344
BspMI ACCTGC 2 cut(s) 272, 1243
BspPI GGATC 2 cut(s) 247, 2743
BspQI GCTCTTC 1 cut(s) 2304
BspT107I GGYRCC 4 cut(s) 1262, 2091, 2770, 2782
BspTI CTTAAG 1 cut(s) 1213
BspTNI GGTCTC 1 cut(s) 792
BsrDI GCAATG 1 cut(s) 2174
BsrFI RCCGGY 1 cut(s) 1238
BsrI ACTGG 4 cut(s) 849, 1089, 1320, 1735
BssAI RCCGGY 1 cut(s) 1238
BssECI CCNNGG 7 cut(s) 752, 1303, 1418, 1426, 1583, 1937, 2211
BssMI GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
BssNI GRCGYC 1 cut(s) 2092
BssT1I CCWWGG 4 cut(s) 752, 1303, 1937, 2211
Bst2UI CCWGG 8 cut(s) 1013, 1140, 1344, 1419, 1551, 1584, 1674, 1965
Bst4CI ACNGT 4 cut(s) 71, 2197, 2245, 2437
Bst6I CTCTTC 9 cut(s) 12, 83, 260, 434, 665, 990, 1479, 2057, 2304
BstACI GRCGYC 1 cut(s) 2092
BstAFI CTTAAG 1 cut(s) 1213
BstAPI GCANNNNNTGC 2 cut(s) 2770, 2789
BstC8I GCNNGC 2 cut(s) 2425, 2429
BstDEI CTNAG 5 cut(s) 38, 513, 1102, 1796, 2331
BstDSI CCRYGG 1 cut(s) 1937
BstEII GGTNACC 1 cut(s) 1287
BstENI CCTNNNNNAGG 2 cut(s) 756, 1656
BstF5I GGATG 7 cut(s) 280, 511, 565, 622, 1649, 1825, 2042
BstH2I RGCGCY 1 cut(s) 2095
BstHHI GCGC 1 cut(s) 2094
BstKTI GATC 8 cut(s) 196, 242, 307, 539, 646, 703, 730, 2738
BstMAI GTCTC 2 cut(s) 792, 2646
BstMBI GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
BstMWI GCNNNNNNNGC 6 cut(s) 839, 1085, 1801, 2262, 2770, 2789
BstNI CCWGG 8 cut(s) 1013, 1140, 1344, 1419, 1551, 1584, 1674, 1965
BstNSI RCATGY 2 cut(s) 1351, 2878
BstPI GGTNACC 1 cut(s) 1287
BstSLI GKGCMC 2 cut(s) 1367, 1426
BstV1I GCAGC 3 cut(s) 2177, 2577, 2776
BstV2I GAAGAC 6 cut(s) 425, 1237, 1375, 1788, 2136, 2412
BstX2I RGATCY 2 cut(s) 239, 2735
BstYI RGATCY 2 cut(s) 239, 2735
BsuI GTATCC 2 cut(s) 1720, 2643
BsuRI GGCC 9 cut(s) 1417, 1424, 1494, 1570, 1741, 2265, 2448, 2596, 2800
BtgI CCRYGG 1 cut(s) 1937
BtrI CACGTC 2 cut(s) 764, 1613
BtsCI GGATG 7 cut(s) 280, 511, 565, 622, 1649, 1825, 2042
BtsI GCAGTG 1 cut(s) 2218
BtsIMutI CAGTG 4 cut(s) 856, 2218, 2256, 2289
BveI ACCTGC 2 cut(s) 272, 1243
Cac8I GCNNGC 2 cut(s) 2425, 2429
CaiI CAGNNNCTG 1 cut(s) 1556
CfoI GCGC 1 cut(s) 2094
Cfr10I RCCGGY 1 cut(s) 1238
CseI GACGC 1 cut(s) 2558
CsiI ACCWGGT 2 cut(s) 1138, 1549
Csp6I GTAC 5 cut(s) 42, 2193, 2241, 2825, 2878
CviQI GTAC 5 cut(s) 42, 2193, 2241, 2825, 2878
DdeI CTNAG 5 cut(s) 38, 513, 1102, 1796, 2331
DinI GGCGCC 1 cut(s) 2093
DpnI GATC 8 cut(s) 195, 241, 306, 538, 645, 702, 729, 2737
DpnII GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
EaeI YGGCCR 1 cut(s) 2263
Eam1104I CTCTTC 9 cut(s) 12, 83, 260, 434, 665, 990, 1479, 2057, 2304
EarI CTCTTC 9 cut(s) 12, 83, 260, 434, 665, 990, 1479, 2057, 2304
Ecl136II GAGCTC 2 cut(s) 1804, 1961
Eco130I CCWWGG 4 cut(s) 752, 1303, 1937, 2211
Eco147I AGGCCT 1 cut(s) 2448
Eco24I GRGCYC 4 cut(s) 1006, 1426, 1806, 1963
Eco31I GGTCTC 1 cut(s) 792
Eco47I GGWCC 4 cut(s) 929, 1484, 1587, 1667
Eco53kI GAGCTC 2 cut(s) 1804, 1961
Eco57I CTGAAG 4 cut(s) 1620, 2328, 2361, 2850
Eco88I CYCGRG 3 cut(s) 1425, 1656, 1892
Eco91I GGTNACC 1 cut(s) 1287
EcoICRI GAGCTC 2 cut(s) 1804, 1961
EcoNI CCTNNNNNAGG 2 cut(s) 756, 1656
EcoO109I RGGNCCY 3 cut(s) 929, 1422, 1568
EcoO65I GGTNACC 1 cut(s) 1287
EcoRII CCWGG 8 cut(s) 1011, 1138, 1342, 1417, 1549, 1582, 1672, 1963
EcoT14I CCWWGG 4 cut(s) 752, 1303, 1937, 2211
EcoT38I GRGCYC 4 cut(s) 1006, 1426, 1806, 1963
EgeI GGCGCC 1 cut(s) 2093
EheI GGCGCC 1 cut(s) 2093
ErhI CCWWGG 4 cut(s) 752, 1303, 1937, 2211
Esp3I CGTCTC 1 cut(s) 2646
FalI AAGNNNNNCTT 4 cut(s) 1021, 1053, 1489, 1521
FaqI GGGAC 3 cut(s) 728, 1308, 1623
FauI CCCGC 1 cut(s) 2769
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 1021
Fnu4HI GCNGC 6 cut(s) 1739, 2166, 2591, 2594, 2790, 2793
FokI GGATG 7 cut(s) 287, 518, 572, 629, 1656, 1832, 2029
FriOI GRGCYC 4 cut(s) 1006, 1426, 1806, 1963
Fsp4HI GCNGC 6 cut(s) 1739, 2166, 2591, 2594, 2790, 2793
GlaI GCGC 1 cut(s) 2093
GluI GCNGC 6 cut(s) 1739, 2166, 2591, 2594, 2790, 2793
GsaI CCCAGC 1 cut(s) 2143
GsuI CTGGAG 2 cut(s) 1784, 2529
HaeII RGCGCY 1 cut(s) 2095
HaeIII GGCC 9 cut(s) 1417, 1424, 1494, 1570, 1741, 2265, 2448, 2596, 2800
HapII CCGG 5 cut(s) 557, 1239, 1361, 1482, 2383
HgaI GACGC 1 cut(s) 2558
HhaI GCGC 1 cut(s) 2094
Hin1I GRCGYC 1 cut(s) 2092
Hin6I GCGC 1 cut(s) 2092
HinP1I GCGC 1 cut(s) 2092
HincII GTYRAC 1 cut(s) 1930
HindII GTYRAC 1 cut(s) 1930
HindIII AAGCTT 3 cut(s) 320, 840, 1793
HpaII CCGG 5 cut(s) 557, 1239, 1361, 1482, 2383
Hpy166II GTNNAC 3 cut(s) 1022, 1667, 1930
Hpy8I GTNNAC 3 cut(s) 1022, 1667, 1930
Hpy99I CGWCG 1 cut(s) 2253
HpyCH4III ACNGT 4 cut(s) 71, 2197, 2245, 2437
HpyCH4IV ACGT 4 cut(s) 763, 1612, 2251, 2295
HpyCH4V TGCA 7 cut(s) 1159, 1298, 1847, 1873, 2165, 2372, 2654
HpyF10VI GCNNNNNNNGC 6 cut(s) 839, 1085, 1801, 2262, 2770, 2789
HpyF3I CTNAG 5 cut(s) 38, 513, 1102, 1796, 2331
HpySE526I ACGT 4 cut(s) 763, 1612, 2251, 2295
Hsp92I GRCGYC 1 cut(s) 2092
HspAI GCGC 1 cut(s) 2092
KasI GGCGCC 1 cut(s) 2091
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
LguI GCTCTTC 1 cut(s) 2304
LmnI GCTCC 5 cut(s) 1687, 1759, 1765, 1966, 2215
Lsp1109I GCAGC 3 cut(s) 2177, 2577, 2776
LweI GCATC 4 cut(s) 119, 196, 550, 2566
MabI ACCWGGT 2 cut(s) 1138, 1549
MaeII ACGT 4 cut(s) 763, 1612, 2251, 2295
MaeIII GTNAC 3 cut(s) 1287, 1372, 2566
MalI GATC 8 cut(s) 195, 241, 306, 538, 645, 702, 729, 2737
MboI GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
MflI RGATCY 2 cut(s) 239, 2735
MhlI GDGCHC 6 cut(s) 1006, 1367, 1426, 1806, 1963, 2220
MlsI TGGCCA 1 cut(s) 2265
MluNI TGGCCA 1 cut(s) 2265
Mly113I GGCGCC 1 cut(s) 2092
MlyI GAGTC 4 cut(s) 109, 457, 1177, 2323
MmeI TCCRAC 2 cut(s) 9, 2419
Mox20I TGGCCA 1 cut(s) 2265
MroXI GAANNNNTTC 2 cut(s) 679, 1535
MscI TGGCCA 1 cut(s) 2265
MseI TTAA 5 cut(s) 105, 294, 837, 1214, 2886
MslI CAYNNNNRTG 3 cut(s) 342, 909, 1271
Msp20I TGGCCA 1 cut(s) 2265
MspA1I CMGCKG 1 cut(s) 2789
MspCI CTTAAG 1 cut(s) 1213
MspI CCGG 5 cut(s) 557, 1239, 1361, 1482, 2383
Mva1269I GAATGC 4 cut(s) 679, 1314, 1623, 1740
MvaI CCWGG 8 cut(s) 1013, 1140, 1344, 1419, 1551, 1584, 1674, 1965
MwoI GCNNNNNNNGC 6 cut(s) 839, 1085, 1801, 2262, 2770, 2789
NarI GGCGCC 1 cut(s) 2092
NciI CCSGG 2 cut(s) 1362, 1482
NcoI CCATGG 1 cut(s) 1937
NdeII GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
NmuCI GTSAC 3 cut(s) 1287, 1372, 2566
NspI RCATGY 2 cut(s) 1351, 2878
PaeR7I CTCGAG 1 cut(s) 1656
PaqCI CACCTGC 1 cut(s) 272
PceI AGGCCT 1 cut(s) 2448
PciI ACATGT 1 cut(s) 2874
PciSI GCTCTTC 1 cut(s) 2304
PcsI WCGNNNNNNNCGW 2 cut(s) 2292, 2636
PctI GAATGC 4 cut(s) 679, 1314, 1623, 1740
PdmI GAANNNNTTC 2 cut(s) 679, 1535
PfeI GAWTC 9 cut(s) 200, 251, 329, 923, 953, 1064, 2186, 2585, 2614
PfoI TCCNGGA 1 cut(s) 1480
PkrI GCNGC 6 cut(s) 1740, 2167, 2592, 2595, 2791, 2794
PleI GAGTC 4 cut(s) 108, 456, 1177, 2323
PluTI GGCGCC 1 cut(s) 2095
PpsI GAGTC 4 cut(s) 108, 456, 1177, 2323
PpuMI RGGWCCY 1 cut(s) 929
PscI ACATGT 1 cut(s) 2874
Psp124BI GAGCTC 2 cut(s) 1806, 1963
Psp5II RGGWCCY 1 cut(s) 929
Psp6I CCWGG 8 cut(s) 1011, 1138, 1342, 1417, 1549, 1582, 1672, 1963
PspEI GGTNACC 1 cut(s) 1287
PspFI CCCAGC 1 cut(s) 2139
PspGI CCWGG 8 cut(s) 1011, 1138, 1342, 1417, 1549, 1582, 1672, 1963
PspOMI GGGCCC 1 cut(s) 1422
PspPPI RGGWCCY 1 cut(s) 929
PspXI VCTCGAGB 1 cut(s) 1656
PsrI GAACNNNNNNTAC 2 cut(s) 493, 525
PstNI CAGNNNCTG 1 cut(s) 1556
PsuI RGATCY 2 cut(s) 239, 2735
PvuII CAGCTG 1 cut(s) 2789
RsaI GTAC 5 cut(s) 43, 2194, 2242, 2826, 2879
RsaNI GTAC 5 cut(s) 42, 2193, 2241, 2825, 2878
RseI CAYNNNNRTG 3 cut(s) 342, 909, 1271
SacI GAGCTC 2 cut(s) 1806, 1963
SapI GCTCTTC 1 cut(s) 2304
SaqAI TTAA 5 cut(s) 105, 294, 837, 1214, 2886
SatI GCNGC 6 cut(s) 1739, 2166, 2591, 2594, 2790, 2793
Sau3AI GATC 8 cut(s) 193, 239, 304, 536, 643, 700, 727, 2735
ScaI AGTACT 1 cut(s) 43
SchI GAGTC 4 cut(s) 109, 457, 1177, 2323
SduI GDGCHC 6 cut(s) 1006, 1367, 1426, 1806, 1963, 2220
SexAI ACCWGGT 2 cut(s) 1138, 1549
SfaNI GCATC 4 cut(s) 119, 196, 550, 2566
SfoI GGCGCC 1 cut(s) 2093
Sfr274I CTCGAG 1 cut(s) 1656
SinI GGWCC 4 cut(s) 929, 1484, 1587, 1667
SlaI CTCGAG 1 cut(s) 1656
SmiMI CAYNNNNRTG 3 cut(s) 342, 909, 1271
SmlI CTYRAG 5 cut(s) 1213, 1656, 2015, 2081, 2390
SmoI CTYRAG 5 cut(s) 1213, 1656, 2015, 2081, 2390
SpeI ACTAGT 2 cut(s) 422, 494
SseBI AGGCCT 1 cut(s) 2448
SsiI CCGC 6 cut(s) 563, 1738, 2555, 2593, 2762, 2793
SspDI GGCGCC 1 cut(s) 2091
SspI AATATT 2 cut(s) 1594, 2416
SstI GAGCTC 2 cut(s) 1806, 1963
StuI AGGCCT 1 cut(s) 2448
StyI CCWWGG 4 cut(s) 752, 1303, 1937, 2211
TaaI ACNGT 4 cut(s) 71, 2197, 2245, 2437
TaiI ACGT 4 cut(s) 766, 1615, 2254, 2298
TatI WGTACW 1 cut(s) 41
TauI GCSGC 3 cut(s) 1741, 2596, 2795
TfiI GAWTC 9 cut(s) 200, 251, 329, 923, 953, 1064, 2186, 2585, 2614
Tru1I TTAA 5 cut(s) 105, 294, 837, 1214, 2886
Tru9I TTAA 5 cut(s) 105, 294, 837, 1214, 2886
TscAI CASTG 4 cut(s) 856, 2225, 2263, 2296
TseFI GTSAC 3 cut(s) 1287, 1372, 2566
TseI GCWGC 3 cut(s) 2165, 2590, 2789
Tsp45I GTSAC 3 cut(s) 1287, 1372, 2566
TspDTI ATGAA 9 cut(s) 17, 291, 387, 1089, 1319, 1375, 1741, 1890, 2624
TspRI CASTG 4 cut(s) 856, 2225, 2263, 2296
Vha464I CTTAAG 1 cut(s) 1213
VpaK11BI GGWCC 4 cut(s) 929, 1484, 1587, 1667
XagI CCTNNNNNAGG 2 cut(s) 756, 1656
XapI RAATTY 3 cut(s) 746, 1747, 2656
XbaI TCTAGA 2 cut(s) 332, 605
XceI RCATGY 2 cut(s) 1351, 2878
XcmI CCANNNNNNNNNTGG 2 cut(s) 1410, 1961
XhoI CTCGAG 1 cut(s) 1656
XmaJI CCTAGG 1 cut(s) 752
XmiI GTMKAC 1 cut(s) 1021
XmnI GAANNNNTTC 2 cut(s) 679, 1535
ZrmI AGTACT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.