Rh2CG268000

Belongs to the MT-A70-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0005856
Physical Location & Seq
Reverse (-)
28949297 .. 28954988
5692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG268000.1

Sequence Viewer

Length: 3270 bp
ATGGATTCACCTGAACGTAATCGGAGTTATGTGAAACGAGATGTGGAGGATGGTTCTGATTTGAAGAGCGATAGGGCGGGAGATGATGAAGAGTGGGAAGGCAGTGATAAGAGGAAGCATCGTTCGAGCAGATCAAGGAAATCGGGTAATGGAGAAGAGGCAGGAGGACTAGATGGCAGTGGAAGAAGAAGAAGTCATGCGGATAGAAGTGAGAGCCGTAAACGATCAGGTGGCTCTAGCAATGCGGATAGTGATGAAGAAGACTATGACTCGAGAAAAGAGTCGCGTTCTAAGCTCATGAAGAAGAAACAAGAAGAGAGTAGTTTGGAGAAGTTGAGCAGCTGGTATCAGGATGGAGAATTGGAGAATAGGCAAGATGGTGGAGATAAGTCAGGGAGTAGAGGGCTGATTAGAGCTGAAGAAAATGAAAGAAGGAAACTGGCTTCAAAGCTTGCACAGCACGAGAATTCCCACACTAAAAGTAAGAGCAAAGAAGAAAGGTCTCATGATGGAGAACATGAAAAGACACTGGACAGAGACTCCAAGTATGCTGACAGGAAAGAAAGCATTCGAGAGAAGGCTCATGGATCTTCCGAACAGGTGAGGACTTCGAGAAGAAAATGGGATGAATCAGACGGTGGCAAGAAAGCAGAAGAGAGTTATCATGAAAGATCTGATTCAAGAAGCAGTAAGCCTTCTGATCCTAAGTATGAGACTTCTAAAGAGAAAACTGTGTCAGCAAGAAATGAACCAAGCGAAAGTAAAATCAGGGGAGTAGATTCAAGCAGTGAAAGGGGTACTAAATCTAATAACAAGGAAGAGAGAAAAGCTGATGCGGAAAAGAGTAAGAGCAAAAACAGGGGAGAAATACTTGAAGAAGATAACAGGGGCAGTCCTATCACTCGTGAAGACAGATCAGGCAAGGAGAAAGCTGAAAAGCATAGACAGCAGAGAACTCCCACTGCTCGCGATGCTGCTGAGGGCAGGGAGAGGTCGTCTAATGCAGATGACGATGCAAGTGCAGGGATTAAAGATAAGGGTGCTAGAGAATTTGGAAATACTACCAGGTCAAGGACACCTGAGAGGCCCGGGAGGCGATATCAGGATTCAGAACACTTTGAGGCGGATTATGACCGAAGTTTTAATCTCAAGCGGAAGGAACTGGAAAAAGATGGTTATAGGGACGACCGACCTAAAGGCAGAGATGATAATTATAGTGACAGGAATAGGGACCGGGAAGTCCCCAAAGAGAACTGGAAAAGACGGCAACCCCCCAGTAATGACAAGGATTCCAAAAATGGGGATATTAGTTATGATCATAGCAGGGAGTGGGAGCTGCCGAGACATGGTCGTGAGAGGGGTGACAACGAAAGACCTCATGGTCGGTCTGGTAATAGGAAAGATGGAAGCCGGGGTGAAGCTGTGAAAACTTCATCAAACTTTGGAATTTCAAATGAAAATTATGATGTGATTGAGATCCAAACTAAGCCAATAGATTATGGAAGAGCAGAGTTGGGATCCAACTTTTCTAGGAGAAACGAAGTTGGTCAACAATCTGATGGAAAATCAGCACCAATTGATGAAGAATGGACAAGGAAGAGTGATATGTATGGGTCTGGACCACCTAGGGAAGATTCAAAGGAAAGATATACTGATGATACTACCTCCTTGCGAGATCAGAGTTCATGGAAGGATGACTTTGACTCCCATGGAGTGAAGGGAAGGGGACAAAGAGGTTCTATGCCTGGCCGCAGTGCTGGTGGCCAGAGTTCTAGTGGTGGTTCACAGCCTCCATATGGAAATGCAGAGCCAGGACCCTTCAATAGAAATGCTTCTCAAGGAGTGAAAGGGGGTAGAGGCGGGAGAGGAGGAAGGGTTAGGCTTACTGGAAGAGACGGCCAGCAGGTAGCAATCCCAATTCCAATAATGGGATCACCATTTGGACCTATTGGAATGCCTCCGCCTGGACCCATGCAGCCACTTACCCCTAGCATGTCACCAGCTCCAGGTCCGCCAATGTTTCCATTTTCTCCACCTGTGTGGGCTGGGGCTCGAGGTGTTGACATCAGTATGTTAACCATCCCACCCACTGTTCCTCATGGATCATCAGGCCCAAGATTTCCTCCTAATATGGTGTCTCCAACTAACCCTTCCATGTTTTTTAGCCAATCTGGGCCTGGAAGAGGAGGTCCTCCGAGCATATCTGGCCCTGGTTTTAATCCCGCAGGGCCAATGGGACGAGGTACTCCTGCTGATAAAAATCAAGGTGGTTGGGTTCCTCATAAAAGTAGTGGACCTCCTGGTAAAGCTCCTTCTAGAGGAGAGCAGAACGATTACTCTCAAAATTTTGTTGATACTGGTATGCGGCCCCAGAATTTCATCAGGGAGCTAGAGCTTACAAATGTTGTGGAGGATTACCCCAAGCTTAGGGAGCTTATACAGAAAAAAGATGAGATTGTGGCAAAAGCTGCTTCTCATCCCATGTACCATAAATGTGACCTGAAAGAGTTTGAGCTGTCTCCGGAGTTCTTTGGAACCAAATTTGATGTGATTCTTGTTGATCCACCATGGGAGGAATACGTTCATCGCGCTCCTGGTGTTGCTGACCATACAGAGTATTGGACATTTGAAGAAATAATGAACCTTAAGATTGAGGCAATAGCAGACACACCTTCCTTTATTTTCCTTTGGGTGGGTGATGGCATGGGTCTTGAGCAAGGTCGTCAATGTCTGAAAAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTGAAGACGAACAAAACTAATGCAACTCCTGGTTTGCGGCATGATTCTCACACATTGTTTCAGCACTCAAAGGAACATTGCTTGATGGGAATAAAAGGCACCGTTCGTCGCAGCACTGATGGCCATATAATCCATGCCAACATTGATACCGATGTAATAATAGCTGAGGAACCCCCATATGGTTCAACCCAGAAGCCTGAGGACATGTACAGGATAATTGAGCATTTTGCCCTTGGTCGCAGGAGGCTTGAGCTCTTTGGTGAAGACCACAATATTCGGGCTGGTTGGCTGACTGTTGGTAAAGGATTATCCTCATCAAACTTTAATGCCGAGGTAAAATATCAGTTTCTGCAACTGGGTGATCATTTAGGACTAGTTCCTCTGTTTCTGCTACTGATTGATAATTTAGGCTTAACCATGGAAAACATTTTTTTTTTCTTCCTCATTTATGGCTTAACCATTGAGTTCTGTGGATGTGGATGTGGATATGATAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MT-A70

Protein Analysis

1089

Amino Acids

122.08

Weight (kDa)

7.41

Isoelectric Point (pI)

55.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MT-A70 PF05063 848 - 1025 2.7e-52 MT-A70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1238, 1380
Acc36I ACCTGC 1 cut(s) 1894
AccB1I GGYRCC 1 cut(s) 2870
AccII CGCG 3 cut(s) 286, 969, 2589
AccIII TCCGGA 1 cut(s) 2521
AclWI GGATC 8 cut(s) 595, 695, 1471, 1512, 1525, 1939, 2110, 2555
AcoI YGGCCR 4 cut(s) 1747, 1762, 1897, 2893
AcsI RAATTY 6 cut(s) 466, 1049, 1446, 2344, 2374, 2540
AcuI CTGAAG 1 cut(s) 438
AfaI GTAC 4 cut(s) 799, 2245, 2486, 2981
AflII CTTAAG 1 cut(s) 2645
AflIII ACRYGT 1 cut(s) 2976
AhlI ACTAGT 1 cut(s) 3145
AjuI GAANNNNNNNTTGG 2 cut(s) 2134, 2166
AleI CACNNNNGTG 1 cut(s) 2038
AloI GAACNNNNNNTCC 2 cut(s) 106, 138
Alw21I GWGCWC 1 cut(s) 3027
Alw26I GTCTC 7 cut(s) 507, 531, 707, 1336, 1887, 2142, 2523
AlwI GGATC 8 cut(s) 595, 695, 1471, 1512, 1525, 1939, 2110, 2555
AlwNI CAGNNNCTG 1 cut(s) 3121
Ama87I CYCGRG 3 cut(s) 271, 1088, 2052
Aor13HI TCCGGA 1 cut(s) 2521
ApeKI GCWGC 6 cut(s) 339, 974, 1336, 1975, 2468, 2883
ApoI RAATTY 6 cut(s) 466, 1049, 1446, 2344, 2374, 2540
Asp700I GAANNNNTTC 3 cut(s) 567, 1831, 2580
AspA2I CCTAGG 1 cut(s) 1625
AspLEI GCGC 1 cut(s) 2591
AsuC2I CCSGG 4 cut(s) 1089, 1090, 1235, 1412
AsuHPI GGTGA 9 cut(s) 613, 1373, 1427, 1926, 1989, 2708, 2785, 3044, 3143
AvaI CYCGRG 3 cut(s) 271, 1088, 2052
AvaII GGWCC 8 cut(s) 1231, 1619, 1814, 1943, 1967, 2009, 2189, 2294
AvrII CCTAGG 1 cut(s) 1625
AxyI CCTNAGG 1 cut(s) 2970
BaeI ACNNNNGTAYC 2 cut(s) 2910, 2943
BalI TGGCCA 2 cut(s) 1764, 2895
BamHI GGATCC 1 cut(s) 1517
BanI GGYRCC 1 cut(s) 2870
BanII GRGCYC 2 cut(s) 2053, 3027
BarI GAAGNNNNNNTAC 2 cut(s) 2296, 2328
BauI CACGAG 2 cut(s) 461, 903
BbsI GAAGAC 4 cut(s) 267, 915, 2783, 3042
Bbv12I GWGCWC 1 cut(s) 3027
BbvCI CCTCAGC 2 cut(s) 978, 2937
BbvI GCAGC 6 cut(s) 351, 961, 1323, 1987, 2455, 2895
BceAI ACGGC 3 cut(s) 201, 1280, 1912
BcgI CGANNNNNNTGC 2 cut(s) 1001, 1035
BclI TGATCA 2 cut(s) 1315, 3133
BcnI CCSGG 4 cut(s) 1089, 1090, 1235, 1412
BcoDI GTCTC 7 cut(s) 507, 531, 707, 1336, 1887, 2142, 2523
BcuI ACTAGT 1 cut(s) 3145
BfrI CTTAAG 1 cut(s) 2645
BfuAI ACCTGC 1 cut(s) 1894
BglI GCCNNNNNGGC 1 cut(s) 1093
BglII AGATCT 1 cut(s) 671
BisI GCNGC 9 cut(s) 340, 975, 1337, 1750, 1976, 2366, 2469, 2810, 2884
BlnI CCTAGG 1 cut(s) 1625
BlsI GCNGC 9 cut(s) 341, 976, 1338, 1751, 1977, 2367, 2470, 2811, 2885
Bme18I GGWCC 8 cut(s) 1231, 1619, 1814, 1943, 1967, 2009, 2189, 2294
BmeT110I CYCGRG 3 cut(s) 271, 1088, 2052
BmiI GGNNCC 9 cut(s) 1232, 1519, 1816, 1969, 2277, 2369, 2536, 2872, 2943
BmrI ACTGGG 2 cut(s) 1269, 3137
BmsI GCATC 4 cut(s) 127, 823, 961, 1003
BmuI ACTGGG 2 cut(s) 1269, 3137
BpiI GAAGAC 4 cut(s) 267, 915, 2783, 3042
BpmI CTGGAG 1 cut(s) 1989
Bpu10I CCTNAGC 3 cut(s) 978, 2426, 2937
BpuEI CTTGAG 4 cut(s) 1133, 1821, 2732, 3041
BpuMI CCSGG 4 cut(s) 1089, 1090, 1235, 1412
BsaBI GATNNNNATC 2 cut(s) 1475, 2259
BsaI GGTCTC 1 cut(s) 507
BsaJI CCNNGG 9 cut(s) 1088, 1411, 1625, 1708, 2209, 2567, 3004, 3102, 3189
BsaWI WCCGGW 1 cut(s) 2521
BsaXI ACNNNNNCTCC 8 cut(s) 524, 554, 980, 1010, 1688, 1718, 1860, 1890
Bse1I ACTGG 8 cut(s) 444, 534, 1167, 1259, 1275, 1891, 2362, 3132
Bse21I CCTNAGG 1 cut(s) 2970
Bse3DI GCAATG 2 cut(s) 247, 2848
Bse8I GATNNNNATC 2 cut(s) 1475, 2259
BseAI TCCGGA 1 cut(s) 2521
BseDI CCNNGG 9 cut(s) 1088, 1411, 1625, 1708, 2209, 2567, 3004, 3102, 3189
BseGI GGATG 8 cut(s) 55, 358, 631, 1699, 2079, 2476, 3251, 3257
BseJI GATNNNNATC 2 cut(s) 1475, 2259
BseMI GCAATG 2 cut(s) 247, 2848
BseMII CTCAG 4 cut(s) 969, 1071, 2928, 2961
BseNI ACTGG 8 cut(s) 444, 534, 1167, 1259, 1275, 1891, 2362, 3132
BseRI GAGGAG 3 cut(s) 1881, 2199, 2334
BseXI GCAGC 6 cut(s) 351, 961, 1323, 1987, 2455, 2895
BseYI CCCAGC 1 cut(s) 2045
BsgI GTGCAG 1 cut(s) 1041
Bsh1236I CGCG 3 cut(s) 286, 969, 2589
Bsh1285I CGRYCG 1 cut(s) 1189
BshNI GGYRCC 1 cut(s) 2870
BsiEI CGRYCG 1 cut(s) 1189
BsiHKAI GWGCWC 1 cut(s) 3027
BsiHKCI CYCGRG 3 cut(s) 271, 1088, 2052
BsiSI CCGG 4 cut(s) 1089, 1234, 1411, 2522
BslFI GGGAC 5 cut(s) 1196, 1226, 1244, 1740, 2250
BsmAI GTCTC 7 cut(s) 507, 531, 707, 1336, 1887, 2142, 2523
BsmBI CGTCTC 1 cut(s) 1887
BsmFI GGGAC 5 cut(s) 1196, 1226, 1244, 1740, 2250
BsmI GAATGC 2 cut(s) 567, 1959
Bso31I GGTCTC 1 cut(s) 507
BsoBI CYCGRG 3 cut(s) 271, 1088, 2052
Bsp1286I GDGCHC 2 cut(s) 2053, 3027
Bsp13I TCCGGA 1 cut(s) 2521
Bsp1407I TGTACA 1 cut(s) 2979
Bsp19I CCATGG 3 cut(s) 1708, 2567, 3189
Bsp68I TCGCGA 1 cut(s) 969
BspCNI CTCAG 4 cut(s) 970, 1072, 2929, 2962
BspEI TCCGGA 1 cut(s) 2521
BspFNI CGCG 3 cut(s) 286, 969, 2589
BspHI TCATGA 3 cut(s) 297, 505, 664
BspLI GGNNCC 9 cut(s) 1232, 1519, 1816, 1969, 2277, 2369, 2536, 2872, 2943
BspMI ACCTGC 1 cut(s) 1894
BspPI GGATC 8 cut(s) 595, 695, 1471, 1512, 1525, 1939, 2110, 2555
BspQI GCTCTTC 2 cut(s) 59, 1498
BspT107I GGYRCC 1 cut(s) 2870
BspTI CTTAAG 1 cut(s) 2645
BspTNI GGTCTC 1 cut(s) 507
BsrDI GCAATG 2 cut(s) 247, 2848
BsrGI TGTACA 1 cut(s) 2979
BsrI ACTGG 8 cut(s) 444, 534, 1167, 1259, 1275, 1891, 2362, 3132
BssECI CCNNGG 9 cut(s) 1088, 1411, 1625, 1708, 2209, 2567, 3004, 3102, 3189
BssSI CACGAG 2 cut(s) 461, 903
BssT1I CCWWGG 5 cut(s) 1625, 1708, 2567, 3004, 3189
Bst2BI CACGAG 2 cut(s) 461, 903
Bst4CI ACNGT 5 cut(s) 638, 733, 2092, 2875, 3067
BstAFI CTTAAG 1 cut(s) 2645
BstAPI GCANNNNNTGC 1 cut(s) 2468
BstAUI TGTACA 1 cut(s) 2979
BstC8I GCNNGC 3 cut(s) 453, 967, 1901
BstDEI CTNAG 8 cut(s) 291, 705, 978, 1080, 1485, 2426, 2937, 2970
BstDSI CCRYGG 3 cut(s) 1708, 2567, 3189
BstENI CCTNNNNNAGG 2 cut(s) 2181, 2316
BstF5I GGATG 8 cut(s) 55, 358, 631, 1699, 2079, 2476, 3251, 3257
BstFNI CGCG 3 cut(s) 286, 969, 2589
BstHHI GCGC 1 cut(s) 2591
BstMAI GTCTC 7 cut(s) 507, 531, 707, 1336, 1887, 2142, 2523
BstMCI CGRYCG 1 cut(s) 1189
BstMWI GCNNNNNNNGC 9 cut(s) 292, 457, 946, 971, 1093, 2205, 2431, 2468, 2892
BstNSI RCATGY 2 cut(s) 1996, 2980
BstUI CGCG 3 cut(s) 286, 969, 2589
BstV1I GCAGC 6 cut(s) 351, 961, 1323, 1987, 2455, 2895
BstV2I GAAGAC 4 cut(s) 267, 915, 2783, 3042
BstX2I RGATCY 4 cut(s) 587, 671, 1476, 1517
BstXI CCANNNNNNTGG 1 cut(s) 2040
BstYI RGATCY 4 cut(s) 587, 671, 1476, 1517
Bsu36I CCTNAGG 1 cut(s) 2970
BtgI CCRYGG 3 cut(s) 1708, 2567, 3189
BtgZI GCGATG 2 cut(s) 984, 2570
BtsCI GGATG 8 cut(s) 55, 358, 631, 1699, 2079, 2476, 3251, 3257
BtsI GCAGTG 5 cut(s) 109, 184, 793, 960, 1759
BtsIMutI CAGTG 8 cut(s) 109, 184, 527, 793, 960, 1759, 2088, 2886
BtuMI TCGCGA 1 cut(s) 969
BveI ACCTGC 1 cut(s) 1894
Cac8I GCNNGC 3 cut(s) 453, 967, 1901
CaiI CAGNNNCTG 1 cut(s) 3121
CciI TCATGA 3 cut(s) 297, 505, 664
CfoI GCGC 1 cut(s) 2591
Cfr9I CCCGGG 1 cut(s) 1088
CsiI ACCWGGT 1 cut(s) 1064
Csp6I GTAC 4 cut(s) 798, 2244, 2485, 2980
CspCI CAANNNNNGTGG 2 cut(s) 2388, 2423
CviQI GTAC 4 cut(s) 798, 2244, 2485, 2980
DdeI CTNAG 8 cut(s) 291, 705, 978, 1080, 1485, 2426, 2937, 2970
DrdI GACNNNNNNGTC 2 cut(s) 1238, 1380
DseDI GACNNNNNNGTC 2 cut(s) 1238, 1380
EaeI YGGCCR 4 cut(s) 1747, 1762, 1897, 2893
EciI GGCGGA 3 cut(s) 1139, 1950, 2001
Ecl136II GAGCTC 1 cut(s) 3025
Eco130I CCWWGG 5 cut(s) 1625, 1708, 2567, 3004, 3189
Eco24I GRGCYC 2 cut(s) 2053, 3027
Eco31I GGTCTC 1 cut(s) 507
Eco32I GATATC 1 cut(s) 1100
Eco47I GGWCC 8 cut(s) 1231, 1619, 1814, 1943, 1967, 2009, 2189, 2294
Eco53kI GAGCTC 1 cut(s) 3025
Eco57I CTGAAG 1 cut(s) 438
Eco81I CCTNAGG 1 cut(s) 2970
Eco88I CYCGRG 3 cut(s) 271, 1088, 2052
EcoICRI GAGCTC 1 cut(s) 3025
EcoNI CCTNNNNNAGG 2 cut(s) 2181, 2316
EcoO109I RGGNCCY 2 cut(s) 1814, 2189
EcoRI GAATTC 1 cut(s) 466
EcoRV GATATC 1 cut(s) 1100
EcoT14I CCWWGG 5 cut(s) 1625, 1708, 2567, 3004, 3189
EcoT38I GRGCYC 2 cut(s) 2053, 3027
ErhI CCWWGG 5 cut(s) 1625, 1708, 2567, 3004, 3189
Esp3I CGTCTC 1 cut(s) 1887
FalI AAGNNNNNCTT 2 cut(s) 1682, 1714
FaqI GGGAC 5 cut(s) 1196, 1226, 1244, 1740, 2250
FauI CCCGC 3 cut(s) 70, 1853, 2230
FauNDI CATATG 2 cut(s) 1795, 2950
FbaI TGATCA 2 cut(s) 1315, 3133
Fnu4HI GCNGC 9 cut(s) 340, 975, 1337, 1750, 1976, 2366, 2469, 2810, 2884
FokI GGATG 8 cut(s) 62, 365, 638, 1706, 2066, 2463, 3258, 3264
FriOI GRGCYC 2 cut(s) 2053, 3027
Fsp4HI GCNGC 9 cut(s) 340, 975, 1337, 1750, 1976, 2366, 2469, 2810, 2884
GlaI GCGC 1 cut(s) 2590
GluI GCNGC 9 cut(s) 340, 975, 1337, 1750, 1976, 2366, 2469, 2810, 2884
GsaI CCCAGC 1 cut(s) 2049
GsuI CTGGAG 1 cut(s) 1989
HapII CCGG 4 cut(s) 1089, 1234, 1411, 2522
HhaI GCGC 1 cut(s) 2591
Hin6I GCGC 1 cut(s) 2589
HinP1I GCGC 1 cut(s) 2589
HincII GTYRAC 3 cut(s) 1550, 2062, 2076
HindII GTYRAC 3 cut(s) 1550, 2062, 2076
HindIII AAGCTT 2 cut(s) 449, 2423
HpaI GTTAAC 1 cut(s) 2076
HpaII CCGG 4 cut(s) 1089, 1234, 1411, 2522
HphI GGTGA 9 cut(s) 613, 1373, 1427, 1926, 1989, 2708, 2785, 3044, 3143
Hpy166II GTNNAC 6 cut(s) 221, 1550, 1784, 2062, 2076, 2294
Hpy8I GTNNAC 6 cut(s) 221, 1550, 1784, 2062, 2076, 2294
Hpy99I CGWCG 1 cut(s) 2883
HpyCH4III ACNGT 5 cut(s) 638, 733, 2092, 2875, 3067
HpyCH4IV ACGT 2 cut(s) 16, 2580
HpyCH4V TGCA 8 cut(s) 455, 1004, 1016, 1022, 1805, 1975, 2795, 3124
HpyF10VI GCNNNNNNNGC 9 cut(s) 292, 457, 946, 971, 1093, 2205, 2431, 2468, 2892
HpyF3I CTNAG 8 cut(s) 291, 705, 978, 1080, 1485, 2426, 2937, 2970
HpySE526I ACGT 2 cut(s) 16, 2580
HspAI GCGC 1 cut(s) 2589
Kpn2I TCCGGA 1 cut(s) 2521
Ksp22I TGATCA 2 cut(s) 1315, 3133
KspAI GTTAAC 1 cut(s) 2076
LguI GCTCTTC 2 cut(s) 59, 1498
LmnI GCTCC 6 cut(s) 1333, 2008, 2314, 2386, 2431, 2596
Lsp1109I GCAGC 6 cut(s) 351, 961, 1323, 1987, 2455, 2895
LweI GCATC 4 cut(s) 127, 823, 961, 1003
MabI ACCWGGT 1 cut(s) 1064
MaeII ACGT 2 cut(s) 16, 2580
MaeIII GTNAC 4 cut(s) 1217, 1361, 1995, 2495
MfeI CAATTG 1 cut(s) 1575
MflI RGATCY 4 cut(s) 587, 671, 1476, 1517
MhlI GDGCHC 2 cut(s) 2053, 3027
MlsI TGGCCA 2 cut(s) 1764, 2895
MluNI TGGCCA 2 cut(s) 1764, 2895
MlyI GAGTC 4 cut(s) 263, 290, 533, 1697
MmeI TCCRAC 2 cut(s) 1545, 2165
Mox20I TGGCCA 2 cut(s) 1764, 2895
MroI TCCGGA 1 cut(s) 2521
MroXI GAANNNNTTC 3 cut(s) 567, 1831, 2580
MscI TGGCCA 2 cut(s) 1764, 2895
MseI TTAA 8 cut(s) 1029, 1143, 2075, 2217, 2646, 3096, 3185, 3227
MslI CAYNNNNRTG 4 cut(s) 1350, 2038, 2069, 2493
Msp20I TGGCCA 2 cut(s) 1764, 2895
MspA1I CMGCKG 1 cut(s) 342
MspCI CTTAAG 1 cut(s) 2645
MspI CCGG 4 cut(s) 1089, 1234, 1411, 2522
MunI CAATTG 1 cut(s) 1575
Mva1269I GAATGC 2 cut(s) 567, 1959
MvnI CGCG 3 cut(s) 286, 969, 2589
MwoI GCNNNNNNNGC 9 cut(s) 292, 457, 946, 971, 1093, 2205, 2431, 2468, 2892
NciI CCSGG 4 cut(s) 1089, 1090, 1235, 1412
NcoI CCATGG 3 cut(s) 1708, 2567, 3189
NdeI CATATG 2 cut(s) 1795, 2950
NlaIV GGNNCC 9 cut(s) 1232, 1519, 1816, 1969, 2277, 2369, 2536, 2872, 2943
NmeAIII GCCGAG 2 cut(s) 1365, 3127
NmuCI GTSAC 4 cut(s) 1217, 1361, 1995, 2495
NruI TCGCGA 1 cut(s) 969
NspI RCATGY 2 cut(s) 1996, 2980
OliI CACNNNNGTG 1 cut(s) 2038
PaeR7I CTCGAG 2 cut(s) 271, 2052
PagI TCATGA 3 cut(s) 297, 505, 664
PciI ACATGT 1 cut(s) 2976
PciSI GCTCTTC 2 cut(s) 59, 1498
PctI GAATGC 2 cut(s) 567, 1959
PdmI GAANNNNTTC 3 cut(s) 567, 1831, 2580
PfeI GAWTC 9 cut(s) 5, 629, 677, 779, 1106, 1289, 1634, 2551, 2816
PflFI GACNNNGTC 1 cut(s) 1347
PkrI GCNGC 9 cut(s) 341, 976, 1338, 1751, 1977, 2367, 2470, 2811, 2885
PleI GAGTC 4 cut(s) 263, 289, 533, 1697
PpsI GAGTC 4 cut(s) 263, 289, 533, 1697
PpuMI RGGWCCY 2 cut(s) 1814, 2189
PscI ACATGT 1 cut(s) 2976
Psp124BI GAGCTC 1 cut(s) 3027
Psp5II RGGWCCY 2 cut(s) 1814, 2189
PspFI CCCAGC 1 cut(s) 2045
PspN4I GGNNCC 9 cut(s) 1232, 1519, 1816, 1969, 2277, 2369, 2536, 2872, 2943
PspPPI RGGWCCY 2 cut(s) 1814, 2189
PspXI VCTCGAGB 1 cut(s) 2052
PstNI CAGNNNCTG 1 cut(s) 3121
PsuI RGATCY 4 cut(s) 587, 671, 1476, 1517
PsyI GACNNNGTC 1 cut(s) 1347
PvuII CAGCTG 1 cut(s) 342
RruI TCGCGA 1 cut(s) 969
RsaI GTAC 4 cut(s) 799, 2245, 2486, 2981
RsaNI GTAC 4 cut(s) 798, 2244, 2485, 2980
RseI CAYNNNNRTG 4 cut(s) 1350, 2038, 2069, 2493
SacI GAGCTC 1 cut(s) 3027
SapI GCTCTTC 2 cut(s) 59, 1498
SaqAI TTAA 8 cut(s) 1029, 1143, 2075, 2217, 2646, 3096, 3185, 3227
SatI GCNGC 9 cut(s) 340, 975, 1337, 1750, 1976, 2366, 2469, 2810, 2884
SchI GAGTC 4 cut(s) 263, 290, 533, 1697
SduI GDGCHC 2 cut(s) 2053, 3027
SexAI ACCWGGT 1 cut(s) 1064
SfaNI GCATC 4 cut(s) 127, 823, 961, 1003
Sfr274I CTCGAG 2 cut(s) 271, 2052
SinI GGWCC 8 cut(s) 1231, 1619, 1814, 1943, 1967, 2009, 2189, 2294
SlaI CTCGAG 2 cut(s) 271, 2052
SmaI CCCGGG 1 cut(s) 1090
SmiMI CAYNNNNRTG 4 cut(s) 1350, 2038, 2069, 2493
SmlI CTYRAG 7 cut(s) 271, 1148, 1836, 2052, 2645, 2711, 3020
SmoI CTYRAG 7 cut(s) 271, 1148, 1836, 2052, 2645, 2711, 3020
SpeI ACTAGT 1 cut(s) 3145
SspI AATATT 1 cut(s) 3046
SstI GAGCTC 1 cut(s) 3027
StyI CCWWGG 5 cut(s) 1625, 1708, 2567, 3004, 3189
TaaI ACNGT 5 cut(s) 638, 733, 2092, 2875, 3067
TaiI ACGT 2 cut(s) 19, 2583
TaqI TCGA 5 cut(s) 125, 272, 571, 611, 2053
TaqII GACCGA 3 cut(s) 1149, 1203, 1374
TatI WGTACW 1 cut(s) 2979
TauI GCSGC 3 cut(s) 1752, 2368, 2812
TfiI GAWTC 9 cut(s) 5, 629, 677, 779, 1106, 1289, 1634, 2551, 2816
Tru1I TTAA 8 cut(s) 1029, 1143, 2075, 2217, 2646, 3096, 3185, 3227
Tru9I TTAA 8 cut(s) 1029, 1143, 2075, 2217, 2646, 3096, 3185, 3227
TscAI CASTG 8 cut(s) 109, 184, 534, 793, 967, 1759, 2095, 2893
TseFI GTSAC 4 cut(s) 1217, 1361, 1995, 2495
TseI GCWGC 6 cut(s) 339, 974, 1336, 1975, 2468, 2883
Tsp45I GTSAC 4 cut(s) 1217, 1361, 1995, 2495
TspMI CCCGGG 1 cut(s) 1088
TspRI CASTG 8 cut(s) 109, 184, 534, 793, 967, 1759, 2095, 2893
Tth111I GACNNNGTC 1 cut(s) 1347
Vha464I CTTAAG 1 cut(s) 2645
VpaK11BI GGWCC 8 cut(s) 1231, 1619, 1814, 1943, 1967, 2009, 2189, 2294
XagI CCTNNNNNAGG 2 cut(s) 2181, 2316
XapI RAATTY 6 cut(s) 466, 1049, 1446, 2344, 2374, 2540
XbaI TCTAGA 1 cut(s) 2315
XceI RCATGY 2 cut(s) 1996, 2980
XcmI CCANNNNNNNNNTGG 2 cut(s) 1772, 2174
XhoI CTCGAG 2 cut(s) 271, 2052
XmaI CCCGGG 1 cut(s) 1088
XmaJI CCTAGG 1 cut(s) 1625
XmnI GAANNNNTTC 3 cut(s) 567, 1831, 2580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.