FvH4_1g22240

Belongs to the MT-A70-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005856
Physical Location & Seq
Reverse (-)
14151083 .. 14156669
5587 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22240.t5

Sequence Viewer

Length: 3459 bp
ATGAAGAGTGATAGGGCGGGGGACGACGAGGAGTGGGAGGGGAGTGATAAGAGGAAGCACAGGTCGAGCAGGTCAAGGAAGTCGGGGAACGGAGAGGACGTGGATGGTGGTGGAAGGAGAAGAAGTCATGGGGATAGGAGTGAGAGCCGTAAACGGTCAGGTGGCTCTAGCAATGCGGATAGCGAGGAGGAGGACTATGACTTGAGAAAGGAGTCGCGGTCTAAGATGATGAAGAAGAAGCAAGAGGAGAGTAGTTTGGAGAAGTTGAGCAACTGGTATCAGGATGGGGAATTTGATAATAGGCAAGATGGTGGAGATAAGTCAGGGGGTAGAGGGCTGGTTAGAGCTGAAGAAAATGAAAGAAGGAAACTGGCTTCAAAGCTCGCACAGCACGAGATTTCCCAGACTAAAAGTAAGAGCAAAGAAGAAAAGTCTCATGATGGAGAACATGAAAAGACACTGGACAGAGATTCTAAGTATTCGGACAGGAAAGAAAGCATTCGAGAGAAGACTCATGGGTCTTCTGAACAGGTGAGGACTTCAAGAAGAAAATGGGATGAATCAGATGGTGGCAAGAAAGCAGAAGAAATTTATAATGAAAGATCTGATTCAAGAAGTAGTAAGCCTTCTGATCCTAAGTATGAGCCTTCTAAAGAGAAAACTGTGCTAGCAAAAAATGAACCGAGCGAAAGTAAAATCAGGGGATTAGATTCAAGCATTGAAAGGGGTACTAAATCTAATAACAAGGAAGAGAGAAAAGCTGATGCGGAAAAGAGTAAGAGCAAAAGCAGGGGAGAAATACTTGAAGAAGATAACAGGGGCAGTCCTATCACTCGTGAAGACAGATCTGGCAAGGAGAAAGCTGAAAAGCATAGACAGCAGAGAACTCCCACTGCTCGCGATGCTGCTGAGGGCAGGGAGAGGTTGTCTAATGCAGATGATGATGCAAGTGCAGGGATGAATGATAAGGGTGCTAGAGAATTTGGAAATACCACCAGGTCAAGGACACCTGAGAGGACTGGGAGGCGATATCAGGATTCAGAACACTTTGAGACGGATTATGACCGAAATTTTAATCTCAAGCGAAAAGAACTGGAAAAAGATGGCTATAGGGACGACCGATCTAAAGGCAGAGATGATAACTATAGTGACAGGAGTAGGGACCGGGAAGTCCCCAAAGAAAAAAGACGGCAACCCCCAAGTAATGACAAGGATTCCAAAAATGGGGATATCAGTTATGATCATAGCAGGGAATGGCCGAGATATGGTCGTGAGAGGGGTGACAACGAGAGGCCTCATGGTCGGTCTGGTAATAGGAAAGATGGAAACCGGGGTGAAGCTGTGAAAACTTCATCAAACTTTGGAATTTCAAATGAAAACTATGATGTGATTGAGATCCAAACTAAGCCAGATTTTGTAAGGGCAGAGTTGGGACCCAACTTTCCTAGGAGAAACGAAGTTGGTCAACAGTCTGATGGAAAATCAGCACCAAATGATGAAGAATGTACAAGGAAGAGTGATATGTATGGGTCTGGACCACCTAGGGAAGATTCAAAGGAAAGATATACAGATGATACTACCTCGCGAGATCAGAGTTCATGGAAGGATGACTTTGATGCCCATGGAGTGAAGGGAAGGGGACAAAGAGGTTCTATGCCTGGCCGCAGTGCTGGTGGCCAGAGTTCTAGTGGTGGTTCACAACCTCCATATGGAAATGCAGAGCAGGGACCCTTCAACAGAAATGCTTCTCAAGGAGTGAAAGGAGGTAGAGGTGGGAGAGGAGGAAGGGGTAGGCCTACTGGAAGAGACAGCCAGCAGATGGCAATCCCAATTCCGATGATGGGATCACCATTTGGACCTATTGGAATGCCTCCGCCTGGACCCATGCAGCCACTTACTCCTAGCATGTCACCAGCTCCAGGTCCGCCAATGTTTCCGTTTTCTCCACCTGTGTGGCCGGGGGCTCGAGGTGTTGACATCAGCATGTTAACCATCCCACCTGTTATGCCTCATGGATCATCTGGCCCAAGATTTCCTCCTAATATGGTGACTCCAACAAATCCTTCCATGTTTTGTGGCCAATCTGGACCTGGAAGAGGAGGTCCTCCAAGCATATCTAGCCCTGGCTTTAATCCTTCTGGGCCAATGGGACGAGGAACTCCTGCTGATAAAAGTCAAGGTGGTTGGGTTCCTCATAAAAGTAGTGGACCTCCTGGTAAAGCTCCTTCTAGAGGAGAGCAGAATGATTACTCTCAAAATTTTGTTGATACTGGTATGCGACCCCAAAATTTCATCAGGGAGCTAGAGCTAACAAATGTTGTGGAGGATTACCCCAAGCTTAGGGAGCTTATACAGAAAAAAGATGAGATCGTGGAAAAAGCTGCTTCTAATCCCATGTATTATAAATGCAACCTGAAAGAGTTTGAGCTGTCTCCAGAGTTCTTTGGAACCAAGTTTGATGTGATTCTTGTTGATCCACCATGGGAGGAATACGTTCATCGTGCTCCTGGTGTTGCTGACCATACAGAGTATTGGACATTTGAAGAAATAATGAATCTTAAGATCGAGGCAATAGCAGACACACCTTCCTTTATTTTTCTTTGGGTGGGTGATGGCATGGGTCTTGAGCAGGGCCGTCAATGTCTGAAGAAGTGGGGATTTCGTAGATGTGAAGATATATGTTGGGTGAAGACAAACAAAACTAATCCGACTCCTGGTTTGCGGCATGATTCTCATACATTGTTTCAGCACTCAAAGGAACATTGCTTGATGGGAATAAAGGGTACCGTTCGTCGCAGCACTGATGGCCATATAATCCATGCCAACATTGATACTGATGTAATAATAGCTGAGGAACCCCCATATGGTTCAACCCAGAAGCCTGAAGACATGTACAGGATAATTGAGCATTTTGCCCTCGGTCGCAGGAGGCTTGAGCTCTTTGGTGAAGACCACAACATTCGGGCTGGTTGGCTGACTGTTGGTAATGGATTATCCTCATCAAACTTTAATACCGAGGCTTACATCCGGAACTTTGCTGACAAGGATGGCAAAGTTTGGCAAGGAGGGGGTGGACGAAATCCACCTCCGGAAGCACCTCATCTGGTTGTAACTACTCCAGACATAGAAGCCCTTCGTCCCAAGTCACCAATGAAAAACCAGCAGCAGATGCAGCAGCAGCAATCTGCATCTATTTCTCTGACATCAGTAAATTCCTCCAACAGAAGGCCTGGAAACTCCCCACAAAATCCAACCGGTCTAAGTATGAACCAAGAAGCTTCAAGTTCCAATCCATCAACTCCAGCTCCTTGGGCGGCTTCACCACTGGACGGCTATAAAGGGAGAGAGGGCAGCATTATGCCTTCAGATGATAAGATTTTTGATATGTATGGTTACAGTGGACAGGGAAATGGAGACTATATAGATTTTGAGGCTCACAGGCACATGAATTTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MT-A70

Protein Analysis

1153

Amino Acids

128.76

Weight (kDa)

8.28

Isoelectric Point (pI)

56.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MT-A70 PF05063 839 - 946 1.1e-24 MT-A70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 594, 2403
AasI GACNNNNNNGTC 2 cut(s) 517, 1169
Acc36I ACCTGC 1 cut(s) 60
Acc65I GGTACC 1 cut(s) 2783
AccB1I GGYRCC 1 cut(s) 2783
AccB7I CCANNNNNTGG 1 cut(s) 1819
AccII CGCG 3 cut(s) 217, 900, 1585
AccIII TCCGGA 2 cut(s) 3027, 3088
AciI CCGC 9 cut(s) 17, 176, 217, 767, 1663, 1874, 1925, 2722, 3314
AclWI GGATC 5 cut(s) 626, 1390, 1852, 2023, 2468
AcoI YGGCCR 6 cut(s) 1256, 1660, 1675, 1955, 2077, 2806
AcsI RAATTY 9 cut(s) 290, 588, 980, 1069, 1365, 2257, 2287, 3211, 3448
AcuI CTGAAG 4 cut(s) 369, 2666, 2904, 3348
AfaI GTAC 4 cut(s) 730, 1507, 2785, 2894
AflII CTTAAG 1 cut(s) 2558
AflIII ACRYGT 1 cut(s) 2889
AgeI ACCGGT 1 cut(s) 3254
AjiI CACGTC 1 cut(s) 100
AjuI GAANNNNNNNTTGG 2 cut(s) 2047, 2079
AleI CACNNNNGTG 1 cut(s) 1951
Alw21I GWGCWC 2 cut(s) 2506, 2940
Alw26I GTCTC 5 cut(s) 438, 1046, 1800, 2436, 3408
AlwI GGATC 5 cut(s) 626, 1390, 1852, 2023, 2468
Ama87I CYCGRG 1 cut(s) 1965
Aor13HI TCCGGA 2 cut(s) 3027, 3088
ApeKI GCWGC 9 cut(s) 905, 1888, 2381, 2796, 3163, 3172, 3175, 3178, 3351
ApoI RAATTY 9 cut(s) 290, 588, 980, 1069, 1365, 2257, 2287, 3211, 3448
ArsI GACNNNNNNTTYG 2 cut(s) 2701, 2733
AsiGI ACCGGT 1 cut(s) 3254
Asp700I GAANNNNTTC 4 cut(s) 498, 1744, 2493, 3132
Asp718I GGTACC 1 cut(s) 2783
AspA2I CCTAGG 2 cut(s) 1445, 1541
AsuC2I CCSGG 3 cut(s) 1166, 1331, 1959
AsuNHI GCTAGC 1 cut(s) 667
AvaI CYCGRG 1 cut(s) 1965
AvrII CCTAGG 2 cut(s) 1445, 1541
BaeI ACNNNNGTAYC 2 cut(s) 2823, 2856
BalI TGGCCA 3 cut(s) 1677, 2079, 2808
BanI GGYRCC 1 cut(s) 2783
BanII GRGCYC 2 cut(s) 1966, 2940
BarI GAAGNNNNNNTAC 4 cut(s) 610, 642, 2209, 2241
BauI CACGAG 2 cut(s) 392, 834
BbsI GAAGAC 6 cut(s) 513, 515, 846, 2696, 2892, 2955
Bbv12I GWGCWC 2 cut(s) 2506, 2940
BbvCI CCTCAGC 2 cut(s) 909, 2850
BbvI GCAGC 9 cut(s) 892, 1900, 2368, 2808, 3175, 3184, 3187, 3190, 3363
BceAI ACGGC 4 cut(s) 132, 1205, 2619, 3346
BclI TGATCA 1 cut(s) 1240
BcnI CCSGG 3 cut(s) 1166, 1331, 1959
BcoDI GTCTC 5 cut(s) 438, 1046, 1800, 2436, 3408
BfmI CTRYAG 2 cut(s) 1108, 1144
BfrI CTTAAG 1 cut(s) 2558
BfuAI ACCTGC 1 cut(s) 60
BglII AGATCT 2 cut(s) 602, 845
BlnI CCTAGG 2 cut(s) 1445, 1541
BmeT110I CYCGRG 1 cut(s) 1965
BmgBI CACGTC 1 cut(s) 100
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 6 cut(s) 754, 892, 934, 1606, 3159, 3197
BmtI GCTAGC 1 cut(s) 671
BmuI ACTGGG 1 cut(s) 1029
BpiI GAAGAC 6 cut(s) 513, 515, 846, 2696, 2892, 2955
BpmI CTGGAG 4 cut(s) 1902, 2418, 3102, 3285
Bpu10I CCTNAGC 3 cut(s) 909, 2339, 2850
BpuEI CTTGAG 5 cut(s) 223, 1064, 1734, 2645, 2954
BpuMI CCSGG 3 cut(s) 1166, 1331, 1959
BsaBI GATNNNNATC 2 cut(s) 1394, 1823
BsaWI WCCGGW 3 cut(s) 3027, 3088, 3254
Bse118I RCCGGY 1 cut(s) 3254
Bse1I ACTGG 8 cut(s) 278, 375, 465, 1024, 1098, 1804, 2275, 3330
Bse3DI GCAATG 2 cut(s) 178, 2761
Bse8I GATNNNNATC 2 cut(s) 1394, 1823
BseAI TCCGGA 2 cut(s) 3027, 3088
BseGI GGATG 8 cut(s) 109, 289, 562, 963, 1612, 1992, 3024, 3052
BseJI GATNNNNATC 2 cut(s) 1394, 1823
BseMI GCAATG 2 cut(s) 178, 2761
BseMII CTCAG 3 cut(s) 900, 1002, 2841
BseNI ACTGG 8 cut(s) 278, 375, 465, 1024, 1098, 1804, 2275, 3330
BseRI GAGGAG 7 cut(s) 44, 200, 203, 260, 1794, 2112, 2247
BseXI GCAGC 9 cut(s) 892, 1900, 2368, 2808, 3175, 3184, 3187, 3190, 3363
BsgI GTGCAG 1 cut(s) 972
Bsh1236I CGCG 3 cut(s) 217, 900, 1585
Bsh1285I CGRYCG 2 cut(s) 1120, 2923
BshNI GGYRCC 1 cut(s) 2783
BshTI ACCGGT 1 cut(s) 3254
BsiEI CGRYCG 2 cut(s) 1120, 2923
BsiHKAI GWGCWC 2 cut(s) 2506, 2940
BsiHKCI CYCGRG 1 cut(s) 1965
BsiSI CCGG 6 cut(s) 1165, 1330, 1958, 3028, 3089, 3255
BslFI GGGAC 9 cut(s) 35, 1127, 1157, 1175, 1446, 1653, 1740, 2163, 3123
BsmAI GTCTC 5 cut(s) 438, 1046, 1800, 2436, 3408
BsmBI CGTCTC 1 cut(s) 1046
BsmFI GGGAC 9 cut(s) 35, 1127, 1157, 1175, 1446, 1653, 1740, 2163, 3123
BsmI GAATGC 2 cut(s) 498, 1872
BsoBI CYCGRG 1 cut(s) 1965
Bsp1286I GDGCHC 3 cut(s) 1966, 2506, 2940
Bsp13I TCCGGA 2 cut(s) 3027, 3088
Bsp1407I TGTACA 2 cut(s) 1505, 2892
Bsp19I CCATGG 2 cut(s) 1621, 2480
Bsp68I TCGCGA 2 cut(s) 900, 1585
BspACI CCGC 9 cut(s) 17, 176, 217, 767, 1663, 1874, 1925, 2722, 3314
BspCNI CTCAG 3 cut(s) 901, 1003, 2842
BspEI TCCGGA 2 cut(s) 3027, 3088
BspFNI CGCG 3 cut(s) 217, 900, 1585
BspHI TCATGA 1 cut(s) 436
BspMI ACCTGC 1 cut(s) 60
BspOI GCTAGC 1 cut(s) 671
BspPI GGATC 5 cut(s) 626, 1390, 1852, 2023, 2468
BspT107I GGYRCC 1 cut(s) 2783
BspTI CTTAAG 1 cut(s) 2558
BsrDI GCAATG 2 cut(s) 178, 2761
BsrFI RCCGGY 1 cut(s) 3254
BsrGI TGTACA 2 cut(s) 1505, 2892
BsrI ACTGG 8 cut(s) 278, 375, 465, 1024, 1098, 1804, 2275, 3330
BssAI RCCGGY 1 cut(s) 3254
BssSI CACGAG 2 cut(s) 392, 834
BssT1I CCWWGG 5 cut(s) 1445, 1541, 1621, 2480, 3308
Bst2BI CACGAG 2 cut(s) 392, 834
Bst4CI ACNGT 6 cut(s) 156, 664, 1470, 2788, 2980, 3398
Bst6I CTCTTC 4 cut(s) 744, 1508, 1798, 2089
BstAFI CTTAAG 1 cut(s) 2558
BstAPI GCANNNNNTGC 1 cut(s) 3169
BstAUI TGTACA 2 cut(s) 1505, 2892
BstC8I GCNNGC 4 cut(s) 384, 669, 898, 1814
BstDEI CTNAG 9 cut(s) 222, 474, 636, 909, 1011, 1404, 2339, 2850, 3260
BstDSI CCRYGG 2 cut(s) 1621, 2480
BstENI CCTNNNNNAGG 2 cut(s) 2094, 2229
BstF5I GGATG 8 cut(s) 109, 289, 562, 963, 1612, 1992, 3024, 3052
BstFNI CGCG 3 cut(s) 217, 900, 1585
BstMAI GTCTC 5 cut(s) 438, 1046, 1800, 2436, 3408
BstMCI CGRYCG 2 cut(s) 1120, 2923
BstNSI RCATGY 3 cut(s) 1909, 1987, 2893
BstSFI CTRYAG 2 cut(s) 1108, 1144
BstUI CGCG 3 cut(s) 217, 900, 1585
BstV1I GCAGC 9 cut(s) 892, 1900, 2368, 2808, 3175, 3184, 3187, 3190, 3363
BstV2I GAAGAC 6 cut(s) 513, 515, 846, 2696, 2892, 2955
BstX2I RGATCY 3 cut(s) 602, 845, 1395
BstXI CCANNNNNNTGG 2 cut(s) 1953, 3309
BstYI RGATCY 3 cut(s) 602, 845, 1395
BtgI CCRYGG 2 cut(s) 1621, 2480
BtgZI GCGATG 1 cut(s) 915
BtrI CACGTC 1 cut(s) 100
BtsCI GGATG 8 cut(s) 109, 289, 562, 963, 1612, 1992, 3024, 3052
BtsI GCAGTG 2 cut(s) 891, 1672
BtsIMutI CAGTG 6 cut(s) 458, 891, 1672, 2799, 3323, 3403
BtuMI TCGCGA 2 cut(s) 900, 1585
BveI ACCTGC 1 cut(s) 60
Cac8I GCNNGC 4 cut(s) 384, 669, 898, 1814
CciI TCATGA 1 cut(s) 436
Cfr10I RCCGGY 1 cut(s) 3254
CsiI ACCWGGT 1 cut(s) 995
Csp6I GTAC 4 cut(s) 729, 1506, 2784, 2893
CspAI ACCGGT 1 cut(s) 3254
CspCI CAANNNNNGTGG 2 cut(s) 2301, 2336
CviQI GTAC 4 cut(s) 729, 1506, 2784, 2893
DdeI CTNAG 9 cut(s) 222, 474, 636, 909, 1011, 1404, 2339, 2850, 3260
DrdI GACNNNNNNGTC 2 cut(s) 517, 1169
DseDI GACNNNNNNGTC 2 cut(s) 517, 1169
EaeI YGGCCR 6 cut(s) 1256, 1660, 1675, 1955, 2077, 2806
Eam1104I CTCTTC 4 cut(s) 744, 1508, 1798, 2089
EarI CTCTTC 4 cut(s) 744, 1508, 1798, 2089
EciI GGCGGA 2 cut(s) 1863, 1914
Ecl136II GAGCTC 1 cut(s) 2938
Eco130I CCWWGG 5 cut(s) 1445, 1541, 1621, 2480, 3308
Eco147I AGGCCT 3 cut(s) 1294, 1795, 3229
Eco24I GRGCYC 2 cut(s) 1966, 2940
Eco32I GATATC 2 cut(s) 1031, 1231
Eco53kI GAGCTC 1 cut(s) 2938
Eco57I CTGAAG 4 cut(s) 369, 2666, 2904, 3348
Eco88I CYCGRG 1 cut(s) 1965
EcoICRI GAGCTC 1 cut(s) 2938
EcoNI CCTNNNNNAGG 2 cut(s) 2094, 2229
EcoO109I RGGNCCY 3 cut(s) 1433, 1727, 2102
EcoRV GATATC 2 cut(s) 1031, 1231
EcoT14I CCWWGG 5 cut(s) 1445, 1541, 1621, 2480, 3308
EcoT38I GRGCYC 2 cut(s) 1966, 2940
ErhI CCWWGG 5 cut(s) 1445, 1541, 1621, 2480, 3308
Esp3I CGTCTC 1 cut(s) 1046
FalI AAGNNNNNCTT 2 cut(s) 1595, 1627
FaqI GGGAC 9 cut(s) 35, 1127, 1157, 1175, 1446, 1653, 1740, 2163, 3123
FauI CCCGC 1 cut(s) 10
FauNDI CATATG 2 cut(s) 1708, 2863
FbaI TGATCA 1 cut(s) 1240
FokI GGATG 8 cut(s) 116, 296, 569, 970, 1619, 1979, 3011, 3059
FriOI GRGCYC 2 cut(s) 1966, 2940
GsuI CTGGAG 4 cut(s) 1902, 2418, 3102, 3285
HapII CCGG 6 cut(s) 1165, 1330, 1958, 3028, 3089, 3255
HincII GTYRAC 3 cut(s) 1466, 1975, 1989
HindII GTYRAC 3 cut(s) 1466, 1975, 1989
HindIII AAGCTT 2 cut(s) 2336, 3276
HpaI GTTAAC 1 cut(s) 1989
HpaII CCGG 6 cut(s) 1165, 1330, 1958, 3028, 3089, 3255
Hpy166II GTNNAC 8 cut(s) 152, 1466, 1697, 1975, 1989, 2207, 3074, 3401
Hpy8I GTNNAC 8 cut(s) 152, 1466, 1697, 1975, 1989, 2207, 3074, 3401
Hpy99I CGWCG 2 cut(s) 29, 2796
HpyCH4III ACNGT 6 cut(s) 156, 664, 1470, 2788, 2980, 3398
HpyCH4IV ACGT 2 cut(s) 99, 2493
HpyCH4V TGCA 8 cut(s) 935, 947, 953, 1718, 1888, 2409, 3172, 3188
HpyF3I CTNAG 9 cut(s) 222, 474, 636, 909, 1011, 1404, 2339, 2850, 3260
HpySE526I ACGT 2 cut(s) 99, 2493
KflI GGGWCCC 2 cut(s) 1433, 1727
Kpn2I TCCGGA 2 cut(s) 3027, 3088
KpnI GGTACC 1 cut(s) 2787
Ksp22I TGATCA 1 cut(s) 1240
KspAI GTTAAC 1 cut(s) 1989
LmnI GCTCC 6 cut(s) 1921, 2227, 2299, 2344, 2509, 3310
Lsp1109I GCAGC 9 cut(s) 892, 1900, 2368, 2808, 3175, 3184, 3187, 3190, 3363
LweI GCATC 6 cut(s) 754, 892, 934, 1606, 3159, 3197
MabI ACCWGGT 1 cut(s) 995
MaeII ACGT 2 cut(s) 99, 2493
MaeIII GTNAC 7 cut(s) 1148, 1280, 1908, 2047, 3109, 3144, 3392
MflI RGATCY 3 cut(s) 602, 845, 1395
MhlI GDGCHC 3 cut(s) 1966, 2506, 2940
MlsI TGGCCA 3 cut(s) 1677, 2079, 2808
MluNI TGGCCA 3 cut(s) 1677, 2079, 2808
MlyI GAGTC 4 cut(s) 221, 505, 2044, 2704
MmeI TCCRAC 4 cut(s) 2078, 2732, 3243, 3275
Mox20I TGGCCA 3 cut(s) 1677, 2079, 2808
MroI TCCGGA 2 cut(s) 3027, 3088
MroXI GAANNNNTTC 4 cut(s) 498, 1744, 2493, 3132
MscI TGGCCA 3 cut(s) 1677, 2079, 2808
MseI TTAA 5 cut(s) 1074, 1988, 2130, 2559, 3009
MslI CAYNNNNRTG 2 cut(s) 1951, 1982
Msp20I TGGCCA 3 cut(s) 1677, 2079, 2808
MspCI CTTAAG 1 cut(s) 2558
MspI CCGG 6 cut(s) 1165, 1330, 1958, 3028, 3089, 3255
Mva1269I GAATGC 2 cut(s) 498, 1872
MvnI CGCG 3 cut(s) 217, 900, 1585
NciI CCSGG 3 cut(s) 1166, 1331, 1959
NcoI CCATGG 2 cut(s) 1621, 2480
NdeI CATATG 2 cut(s) 1708, 2863
NheI GCTAGC 1 cut(s) 667
NmeAIII GCCGAG 1 cut(s) 1284
NmuCI GTSAC 5 cut(s) 1148, 1280, 1908, 2047, 3144
NruI TCGCGA 2 cut(s) 900, 1585
NspI RCATGY 3 cut(s) 1909, 1987, 2893
OliI CACNNNNGTG 1 cut(s) 1951
PaeR7I CTCGAG 1 cut(s) 1965
PagI TCATGA 1 cut(s) 436
PceI AGGCCT 3 cut(s) 1294, 1795, 3229
PciI ACATGT 1 cut(s) 2889
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 390
PctI GAATGC 2 cut(s) 498, 1872
PdmI GAANNNNTTC 4 cut(s) 498, 1744, 2493, 3132
PflMI CCANNNNNTGG 1 cut(s) 1819
PinAI ACCGGT 1 cut(s) 3254
PleI GAGTC 4 cut(s) 220, 505, 2044, 2704
PpsI GAGTC 4 cut(s) 220, 505, 2044, 2704
PpuMI RGGWCCY 3 cut(s) 1433, 1727, 2102
PscI ACATGT 1 cut(s) 2889
PsiI TTATAA 2 cut(s) 594, 2403
Psp124BI GAGCTC 1 cut(s) 2940
Psp5II RGGWCCY 3 cut(s) 1433, 1727, 2102
PspPPI RGGWCCY 3 cut(s) 1433, 1727, 2102
PspXI VCTCGAGB 1 cut(s) 1965
PsuI RGATCY 3 cut(s) 602, 845, 1395
RruI TCGCGA 2 cut(s) 900, 1585
RsaI GTAC 4 cut(s) 730, 1507, 2785, 2894
RsaNI GTAC 4 cut(s) 729, 1506, 2784, 2893
RseI CAYNNNNRTG 2 cut(s) 1951, 1982
SacI GAGCTC 1 cut(s) 2940
SaqAI TTAA 5 cut(s) 1074, 1988, 2130, 2559, 3009
SchI GAGTC 4 cut(s) 221, 505, 2044, 2704
SduI GDGCHC 3 cut(s) 1966, 2506, 2940
SexAI ACCWGGT 1 cut(s) 995
SfaNI GCATC 6 cut(s) 754, 892, 934, 1606, 3159, 3197
SfcI CTRYAG 2 cut(s) 1108, 1144
Sfr274I CTCGAG 1 cut(s) 1965
SlaI CTCGAG 1 cut(s) 1965
SmiMI CAYNNNNRTG 2 cut(s) 1951, 1982
SmlI CTYRAG 7 cut(s) 202, 1079, 1749, 1965, 2558, 2624, 2933
SmoI CTYRAG 7 cut(s) 202, 1079, 1749, 1965, 2558, 2624, 2933
SseBI AGGCCT 3 cut(s) 1294, 1795, 3229
SsiI CCGC 9 cut(s) 17, 176, 217, 767, 1663, 1874, 1925, 2722, 3314
SstI GAGCTC 1 cut(s) 2940
StuI AGGCCT 3 cut(s) 1294, 1795, 3229
StyI CCWWGG 5 cut(s) 1445, 1541, 1621, 2480, 3308
TaaI ACNGT 6 cut(s) 156, 664, 1470, 2788, 2980, 3398
TaiI ACGT 2 cut(s) 102, 2496
TaqI TCGA 4 cut(s) 65, 502, 1966, 2565
TaqII GACCGA 4 cut(s) 1080, 1134, 1293, 2909
TatI WGTACW 2 cut(s) 1505, 2892
TauI GCSGC 3 cut(s) 1665, 2725, 3317
Tru1I TTAA 5 cut(s) 1074, 1988, 2130, 2559, 3009
Tru9I TTAA 5 cut(s) 1074, 1988, 2130, 2559, 3009
TscAI CASTG 6 cut(s) 465, 898, 1672, 2806, 3330, 3403
TseFI GTSAC 5 cut(s) 1148, 1280, 1908, 2047, 3144
TseI GCWGC 9 cut(s) 905, 1888, 2381, 2796, 3163, 3172, 3175, 3178, 3351
Tsp45I GTSAC 5 cut(s) 1148, 1280, 1908, 2047, 3144
TspGWI ACGGA 3 cut(s) 105, 1070, 1926
TspRI CASTG 6 cut(s) 465, 898, 1672, 2806, 3330, 3403
Van91I CCANNNNNTGG 1 cut(s) 1819
Vha464I CTTAAG 1 cut(s) 2558
XagI CCTNNNNNAGG 2 cut(s) 2094, 2229
XapI RAATTY 9 cut(s) 290, 588, 980, 1069, 1365, 2257, 2287, 3211, 3448
XbaI TCTAGA 1 cut(s) 2228
XceI RCATGY 3 cut(s) 1909, 1987, 2893
XcmI CCANNNNNNNNNTGG 2 cut(s) 1685, 2087
XhoI CTCGAG 1 cut(s) 1965
XmaJI CCTAGG 2 cut(s) 1445, 1541
XmnI GAANNNNTTC 4 cut(s) 498, 1744, 2493, 3132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.