AT4G11950

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0013131
Physical Location & Seq
Reverse (-)
7173198 .. 7174439
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11950.1

Sequence Viewer

Length: 984 bp
ATGGGCTCTATACCATTTATCTTCATCATCCTTCTTTTTCATGTACATAAATCCAAATCTCAGACCATTGAATCAGCACATTTTCTTGATCTTATGATCAGAGATTACACCATTAGAAACTTCAACATACATTTCAAGACAGGTGCTATCCAGAAAGTCCATCTTCCTTCGAATTTCTCCTCCATTGATATCGCCACAGCTAAGTTTAGATGTGGGAGTTTGAGAAGACACGGTGCAAGAATTGGAGAGTTTCACTTAGGTCCGGGCTTGACCGTGGAGCCATGTGTTGAGAGAGTGATCCTGGTGAGACAGAACTTGGGGTTTAACTGGTCTTCTTATATTTACTCAACCGGTTATAACTTAACCGGTTACAAATACCGGCTTGTGTCTCCTGTTCTTGGTTTATTGGCTTACAATTCAAATCCGGACGGTGTTGCTGTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACCCTATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGCCCTAAACCTAACACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGAGAGCAAGTTTCAGCTTATGTTTGCTTGGGAACAAGACAAGGGCATTACGCGCTTGTGATTAGAGCTCATGATAGTGGCGGTGGCGGTAGTACGGTGGTAACACCGTCGTCATCTCCGGCTTTGACTGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCGATGGTAGTGAAAGGGAAGAAGAAAGCGATGAGAGAGGAGATGGAGAGGAGAGCTTATGAAGAAGAAGCACTTCAGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGATCAAGAACGATTCCAAGATTTGAAAATACTAGGTATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

327

Amino Acids

35.84

Weight (kDa)

9.82

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 24 - 219 5.7e-61 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11950 AT4G22900
fragaria_vesca FvH4_5g01210
malus_domestica MD00G1122700.v1.1 MD04G1070700.v1.1
prunus_persica Prupe.5G087200_v2.0.a1
pyrus_communis pycom04g06390 pycom06g06860
rosa_chinensis RchiOBHm_Chr7g0199881
rosa_laevigata RLG00000003763
rosa_multiflora Rmu_sc0002748.1_g000013
rosa_roxburghii Rroxscaffold_3G00256410
rosa_rugosa Rorug07G0056800
rosa_samantha Rh7AG182100 Rh7BG185000 Rh7CG191600 Rh7DG184900
rosa_wichuraiana Rw7G015970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AccII CGCG 1 cut(s) 647
AccIII TCCGGA 1 cut(s) 424
AciI CCGC 4 cut(s) 675, 681, 732, 761
AclI AACGTT 1 cut(s) 590
AclWI GGATC 1 cut(s) 292
AcsI RAATTY 2 cut(s) 172, 494
AcuI CTGAAG 1 cut(s) 878
AfaI GTAC 2 cut(s) 45, 688
AfiI CCNNNNNNNGG 1 cut(s) 398
AflII CTTAAG 1 cut(s) 499
AgeI ACCGGT 2 cut(s) 350, 365
AgsI TTSAA 7 cut(s) 71, 124, 136, 420, 783, 903, 965
AjnI CCWGG 1 cut(s) 300
AluBI AGCT 5 cut(s) 200, 611, 662, 875, 923
AluI AGCT 5 cut(s) 200, 611, 662, 875, 923
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 2 cut(s) 301, 393
AlwI GGATC 1 cut(s) 292
Aor13HI TCCGGA 1 cut(s) 424
ApoI RAATTY 2 cut(s) 172, 494
AsiGI ACCGGT 2 cut(s) 350, 365
Asp700I GAANNNNTTC 1 cut(s) 891
AspLEI GCGC 1 cut(s) 649
AspS9I GGNCC 1 cut(s) 260
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 1 cut(s) 316
AsuII TTCGAA 1 cut(s) 170
AvaII GGWCC 1 cut(s) 260
BaeGI GKGCMC 1 cut(s) 470
BanII GRGCYC 2 cut(s) 8, 664
BbsI GAAGAC 2 cut(s) 232, 324
Bbv12I GWGCWC 1 cut(s) 664
BccI CCATC 3 cut(s) 168, 817, 856
BciT130I CCWGG 1 cut(s) 302
BclI TGATCA 2 cut(s) 96, 489
BcnI CCSGG 1 cut(s) 264
BcoDI GTCTC 2 cut(s) 301, 393
BfaI CTAG 1 cut(s) 972
BfrI CTTAAG 1 cut(s) 499
Bme1390I CCNGG 2 cut(s) 264, 302
Bme18I GGWCC 1 cut(s) 260
BmgT120I GGNCC 1 cut(s) 260
BmiI GGNNCC 1 cut(s) 279
BmrFI CCNGG 2 cut(s) 264, 302
BpiI GAAGAC 2 cut(s) 232, 324
Bpu14I TTCGAA 1 cut(s) 170
BpuMI CCSGG 1 cut(s) 264
BsaJI CCNNGG 1 cut(s) 273
BsaWI WCCGGW 3 cut(s) 350, 365, 424
Bsc4I CCNNNNNNNGG 1 cut(s) 398
Bse118I RCCGGY 4 cut(s) 350, 365, 378, 747
Bse1I ACTGG 1 cut(s) 332
BseAI TCCGGA 1 cut(s) 424
BseBI CCWGG 1 cut(s) 302
BseDI CCNNGG 1 cut(s) 273
BseGI GGATG 1 cut(s) 27
BseLI CCNNNNNNNGG 1 cut(s) 398
BseMII CTCAG 1 cut(s) 74
BseNI ACTGG 1 cut(s) 332
BseRI GAGGAG 3 cut(s) 169, 872, 883
BseSI GKGCMC 1 cut(s) 470
Bsh1236I CGCG 1 cut(s) 647
BshTI ACCGGT 2 cut(s) 350, 365
BsiHKAI GWGCWC 1 cut(s) 664
BsiSI CCGG 7 cut(s) 263, 351, 366, 379, 425, 713, 748
BslI CCNNNNNNNGG 1 cut(s) 398
BsmAI GTCTC 2 cut(s) 301, 393
Bsp119I TTCGAA 1 cut(s) 170
Bsp1286I GDGCHC 3 cut(s) 8, 470, 664
Bsp13I TCCGGA 1 cut(s) 424
Bsp1407I TGTACA 1 cut(s) 43
Bsp143I GATC 5 cut(s) 88, 96, 297, 489, 941
BspACI CCGC 4 cut(s) 675, 681, 732, 761
BspCNI CTCAG 1 cut(s) 73
BspEI TCCGGA 1 cut(s) 424
BspFNI CGCG 1 cut(s) 647
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 1 cut(s) 279
BspPI GGATC 1 cut(s) 292
BspT104I TTCGAA 1 cut(s) 170
BspTI CTTAAG 1 cut(s) 499
BsrFI RCCGGY 4 cut(s) 350, 365, 378, 747
BsrGI TGTACA 1 cut(s) 43
BsrI ACTGG 1 cut(s) 332
BssAI RCCGGY 4 cut(s) 350, 365, 378, 747
BssECI CCNNGG 1 cut(s) 273
BssMI GATC 5 cut(s) 88, 96, 297, 489, 941
Bst2UI CCWGG 1 cut(s) 302
Bst4CI ACNGT 7 cut(s) 233, 274, 431, 581, 691, 702, 728
BstAFI CTTAAG 1 cut(s) 499
BstAUI TGTACA 1 cut(s) 43
BstBI TTCGAA 1 cut(s) 170
BstC8I GCNNGC 1 cut(s) 565
BstDEI CTNAG 3 cut(s) 60, 201, 256
BstDSI CCRYGG 1 cut(s) 273
BstF5I GGATG 1 cut(s) 27
BstFNI CGCG 1 cut(s) 647
BstHHI GCGC 1 cut(s) 649
BstKTI GATC 5 cut(s) 91, 99, 300, 492, 944
BstMAI GTCTC 2 cut(s) 301, 393
BstMBI GATC 5 cut(s) 88, 96, 297, 489, 941
BstMWI GCNNNNNNNGC 1 cut(s) 646
BstNI CCWGG 1 cut(s) 302
BstSCI CCNGG 2 cut(s) 262, 300
BstSLI GKGCMC 1 cut(s) 470
BstUI CGCG 1 cut(s) 647
BstV2I GAAGAC 2 cut(s) 232, 324
BtgI CCRYGG 1 cut(s) 273
BtgZI GCGATG 2 cut(s) 836, 863
BtsCI GGATG 1 cut(s) 27
BtsI GCAGTG 1 cut(s) 511
BtsIMutI CAGTG 1 cut(s) 511
Cac8I GCNNGC 1 cut(s) 565
CciI TCATGA 1 cut(s) 664
CfoI GCGC 1 cut(s) 649
Cfr10I RCCGGY 4 cut(s) 350, 365, 378, 747
Cfr13I GGNCC 1 cut(s) 260
Csp6I GTAC 2 cut(s) 44, 687
CspAI ACCGGT 2 cut(s) 350, 365
CviAII CATG 4 cut(s) 41, 282, 665, 914
CviQI GTAC 2 cut(s) 44, 687
DdeI CTNAG 3 cut(s) 60, 201, 256
DpnI GATC 5 cut(s) 90, 98, 299, 491, 943
DpnII GATC 5 cut(s) 88, 96, 297, 489, 941
EciI GGCGGA 1 cut(s) 747
Ecl136II GAGCTC 1 cut(s) 662
Eco24I GRGCYC 2 cut(s) 8, 664
Eco32I GATATC 1 cut(s) 190
Eco47I GGWCC 1 cut(s) 260
Eco53kI GAGCTC 1 cut(s) 662
Eco57I CTGAAG 1 cut(s) 878
EcoICRI GAGCTC 1 cut(s) 662
EcoRII CCWGG 1 cut(s) 300
EcoRV GATATC 1 cut(s) 190
EcoT38I GRGCYC 2 cut(s) 8, 664
FaeI CATG 4 cut(s) 44, 285, 668, 917
FalI AAGNNNNNCTT 4 cut(s) 147, 179, 876, 908
FatI CATG 4 cut(s) 40, 281, 664, 913
FbaI TGATCA 2 cut(s) 96, 489
FokI GGATG 1 cut(s) 14
FriOI GRGCYC 2 cut(s) 8, 664
FspBI CTAG 1 cut(s) 972
GlaI GCGC 1 cut(s) 648
HapII CCGG 7 cut(s) 263, 351, 366, 379, 425, 713, 748
HhaI GCGC 1 cut(s) 649
Hin1II CATG 4 cut(s) 44, 285, 668, 917
Hin6I GCGC 1 cut(s) 647
HinP1I GCGC 1 cut(s) 647
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HinfI GANTC 3 cut(s) 71, 442, 952
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 7 cut(s) 263, 351, 366, 379, 425, 713, 748
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 2 cut(s) 63, 101
Hpy188III TCNNGA 7 cut(s) 86, 136, 151, 425, 665, 939, 945
Hpy8I GTNNAC 1 cut(s) 457
Hpy99I CGWCG 1 cut(s) 706
HpyAV CCTTC 2 cut(s) 41, 177
HpyCH4III ACNGT 7 cut(s) 233, 274, 431, 581, 691, 702, 728
HpyCH4IV ACGT 2 cut(s) 459, 590
HpyCH4V TGCA 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 646
HpyF3I CTNAG 3 cut(s) 60, 201, 256
HpySE526I ACGT 2 cut(s) 459, 590
Hsp92II CATG 4 cut(s) 44, 285, 668, 917
HspAI GCGC 1 cut(s) 647
Kpn2I TCCGGA 1 cut(s) 424
Ksp22I TGATCA 2 cut(s) 96, 489
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 5 cut(s) 88, 96, 297, 489, 941
LmnI GCTCC 2 cut(s) 277, 791
MaeI CTAG 1 cut(s) 972
MaeII ACGT 2 cut(s) 459, 590
MaeIII GTNAC 4 cut(s) 368, 575, 581, 694
MalI GATC 5 cut(s) 90, 98, 299, 491, 943
MboI GATC 5 cut(s) 88, 96, 297, 489, 941
MhlI GDGCHC 3 cut(s) 8, 470, 664
MluCI AATT 6 cut(s) 172, 240, 415, 494, 740, 786
MnlI CCTC 6 cut(s) 190, 445, 502, 728, 850, 861
MroI TCCGGA 1 cut(s) 424
MroXI GAANNNNTTC 1 cut(s) 891
MseI TTAA 4 cut(s) 324, 362, 456, 500
MslI CAYNNNNRTG 1 cut(s) 669
MspCI CTTAAG 1 cut(s) 499
MspI CCGG 7 cut(s) 263, 351, 366, 379, 425, 713, 748
MspR9I CCNGG 2 cut(s) 264, 302
MvaI CCWGG 1 cut(s) 302
MvnI CGCG 1 cut(s) 647
MwoI GCNNNNNNNGC 1 cut(s) 646
NciI CCSGG 1 cut(s) 264
NdeII GATC 5 cut(s) 88, 96, 297, 489, 941
NlaIII CATG 4 cut(s) 44, 285, 668, 917
NlaIV GGNNCC 1 cut(s) 279
NspV TTCGAA 1 cut(s) 170
PagI TCATGA 1 cut(s) 664
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 3 cut(s) 71, 442, 952
PinAI ACCGGT 2 cut(s) 350, 365
PsiI TTATAA 1 cut(s) 357
Psp124BI GAGCTC 1 cut(s) 664
Psp1406I AACGTT 1 cut(s) 590
Psp6I CCWGG 1 cut(s) 300
PspGI CCWGG 1 cut(s) 300
PspN4I GGNNCC 1 cut(s) 279
PspPI GGNCC 1 cut(s) 260
RsaI GTAC 2 cut(s) 45, 688
RsaNI GTAC 2 cut(s) 44, 687
RseI CAYNNNNRTG 1 cut(s) 669
SacI GAGCTC 1 cut(s) 664
SaqAI TTAA 4 cut(s) 324, 362, 456, 500
Sau3AI GATC 5 cut(s) 88, 96, 297, 489, 941
Sau96I GGNCC 1 cut(s) 260
ScrFI CCNGG 2 cut(s) 264, 302
SduI GDGCHC 3 cut(s) 8, 470, 664
SfuI TTCGAA 1 cut(s) 170
SinI GGWCC 1 cut(s) 260
SmiMI CAYNNNNRTG 1 cut(s) 669
SmlI CTYRAG 1 cut(s) 499
SmoI CTYRAG 1 cut(s) 499
Sse9I AATT 6 cut(s) 172, 240, 415, 494, 740, 786
SsiI CCGC 4 cut(s) 675, 681, 732, 761
SspMI CTAG 1 cut(s) 972
SstI GAGCTC 1 cut(s) 664
StyD4I CCNGG 2 cut(s) 262, 300
TaaI ACNGT 7 cut(s) 233, 274, 431, 581, 691, 702, 728
TaiI ACGT 2 cut(s) 462, 593
TaqI TCGA 2 cut(s) 170, 938
TasI AATT 6 cut(s) 172, 240, 415, 494, 740, 786
TatI WGTACW 1 cut(s) 43
TfiI GAWTC 3 cut(s) 71, 442, 952
Tru1I TTAA 4 cut(s) 324, 362, 456, 500
Tru9I TTAA 4 cut(s) 324, 362, 456, 500
TscAI CASTG 1 cut(s) 511
TspDTI ATGAA 3 cut(s) 13, 29, 894
TspGWI ACGGA 1 cut(s) 485
TspRI CASTG 1 cut(s) 511
Vha464I CTTAAG 1 cut(s) 499
VpaK11BI GGWCC 1 cut(s) 260
XapI RAATTY 2 cut(s) 172, 494
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.