AT4G22900

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0013131
Physical Location & Seq
Forward (+)
12010080 .. 12011628
1549 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G22900.1

Sequence Viewer

Length: 1032 bp
ATGGATTCATTCTCTTTTTGTATCATCATCATGATACTTCTCTTATCATTCCACCAATCTAAGTCTCAATTGATTCAATCTACACATCTTCTTGATCTCATGATCAGAGATTACACCATTAGAAACTTTAAGCTCAATTTCAACACAGGCGTCACTCAGAAAATCTATCTCCCTTCTAATTTCTCTGGTATCGATATTGACACGGTCAAGTTAAGGTGTGGGAGTTTGAGAAGATATGGCGCAAAAATTGGAGAGTTTCACATCGGTTCAGGCCTTACGGTGGAGCCATGTCCGGAGAGAGTCATGCTAATTAGACAAAACTTTGGTTCGAATTGGTCTTCAATCTACTCTACTGGTTATAACTTATCCGGTTACAATTACAAGCTCGTGTCACCGGTTCTTGGTTTGTTGGCTTATAATGCTAACCCTGACGGTGTGGCCAGGAACCCTTACGAGGTTAATGTTGTAGGTACCGATCAAAACCCAATCTTAATCGATTTCTTGATCAACAAGGCAACTAATAACACTAGCCCTAACCCTACGAAGAAGAACTCGTCAGTCTTGTGTGCGTGTTTTACAAGCAACAGTAACACAACGTTTAGCGAGCAAGTCTCGCCGTATGTGTGTAAAGGTACAAGACAAGGGCATTACGCTCTCGTGATGAAGACAGAAGCTCAAAAAGATGATCATGAAGGTGGTGGTAGTAGTGGTGGAGTGGTGGCATCATCGACGGAGGTGAATGGTGGCAACGGAGGAGGAAAGTTGAGCCGTTGGAAAGTGGCGGTGGGGAGTGTGATAGGGTCAGGGATTGGAGCAATTCTGCTGGGAATGTTAGTGGTGGCGATGTTGGTGAAGGGGAAGAAGAAAGCAATGAGAGAAGAAATGGAGAGAAGAGCTTATGAAGAAGAAGCTCTTCAGGTGTCAATGGTGGGTCATGTTAGAGCTCCTACTGCTCCTGGAACTAGAACTCTTCCTAGAATTTCCGATGATAGGTATAATAAAAACACTCATTTGAATAGTAATTATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

343

Amino Acids

37.51

Weight (kDa)

9.26

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 26 - 222 1.9e-60 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11950 AT4G22900
fragaria_vesca FvH4_5g01210
malus_domestica MD00G1122700.v1.1 MD04G1070700.v1.1
prunus_persica Prupe.5G087200_v2.0.a1
pyrus_communis pycom04g06390 pycom06g06860
rosa_chinensis RchiOBHm_Chr7g0199881
rosa_laevigata RLG00000003763
rosa_multiflora Rmu_sc0002748.1_g000013
rosa_roxburghii Rroxscaffold_3G00256410
rosa_rugosa Rorug07G0056800
rosa_samantha Rh7AG182100 Rh7BG185000 Rh7CG191600 Rh7DG184900
rosa_wichuraiana Rw7G015970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 360, 417
Acc65I GGTACC 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 470
AccIII TCCGGA 1 cut(s) 292
AciI CCGC 1 cut(s) 782
AclI AACGTT 1 cut(s) 596
AcoI YGGCCR 1 cut(s) 438
AcsI RAATTY 1 cut(s) 978
AcuI CTGAAG 1 cut(s) 899
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 2 cut(s) 472, 634
AfiI CCNNNNNNNGG 4 cut(s) 280, 401, 454, 990
AgeI ACCGGT 1 cut(s) 394
AgsI TTSAA 4 cut(s) 77, 142, 342, 1015
AjnI CCWGG 2 cut(s) 440, 955
AluBI AGCT 6 cut(s) 133, 385, 674, 896, 911, 944
AluI AGCT 6 cut(s) 133, 385, 674, 896, 911, 944
Alw21I GWGCWC 1 cut(s) 946
Alw26I GTCTC 2 cut(s) 69, 616
Aor13HI TCCGGA 1 cut(s) 292
AoxI GGCC 2 cut(s) 271, 438
ApoI RAATTY 1 cut(s) 978
AsiGI ACCGGT 1 cut(s) 394
Asp700I GAANNNNTTC 1 cut(s) 912
Asp718I GGTACC 1 cut(s) 470
AspLEI GCGC 1 cut(s) 242
AsuHPI GGTGA 3 cut(s) 384, 748, 862
AsuII TTCGAA 1 cut(s) 329
BalI TGGCCA 1 cut(s) 440
BanI GGYRCC 1 cut(s) 470
BanII GRGCYC 1 cut(s) 946
BauI CACGAG 2 cut(s) 386, 656
BbsI GAAGAC 2 cut(s) 330, 671
Bbv12I GWGCWC 1 cut(s) 946
BceAI ACGGC 2 cut(s) 601, 753
BciT130I CCWGG 2 cut(s) 442, 957
BclI TGATCA 3 cut(s) 102, 504, 685
BcoDI GTCTC 2 cut(s) 69, 616
BfaI CTAG 3 cut(s) 528, 963, 975
Bme1390I CCNGG 2 cut(s) 442, 957
BmiI GGNNCC 3 cut(s) 285, 446, 472
BmrFI CCNGG 2 cut(s) 442, 957
BmsI GCATC 1 cut(s) 731
BpiI GAAGAC 2 cut(s) 330, 671
BplI GAGNNNNNCTC 2 cut(s) 596, 628
Bpu14I TTCGAA 1 cut(s) 329
Bsa29I ATCGAT 2 cut(s) 192, 495
BsaHI GRCGYC 1 cut(s) 150
BsaWI WCCGGW 3 cut(s) 292, 368, 394
Bsc4I CCNNNNNNNGG 4 cut(s) 280, 401, 454, 990
Bse118I RCCGGY 1 cut(s) 394
Bse1I ACTGG 1 cut(s) 358
Bse3DI GCAATG 1 cut(s) 876
BseAI TCCGGA 1 cut(s) 292
BseBI CCWGG 2 cut(s) 442, 957
BseCI ATCGAT 2 cut(s) 192, 495
BseLI CCNNNNNNNGG 4 cut(s) 280, 401, 454, 990
BseMI GCAATG 1 cut(s) 876
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 1 cut(s) 358
BseRI GAGGAG 1 cut(s) 768
BseYI CCCAGC 1 cut(s) 823
BshFI GGCC 2 cut(s) 273, 440
BshNI GGYRCC 1 cut(s) 470
BshTI ACCGGT 1 cut(s) 394
BshVI ATCGAT 2 cut(s) 192, 495
BsiHKAI GWGCWC 1 cut(s) 946
BsiSI CCGG 3 cut(s) 293, 369, 395
BslI CCNNNNNNNGG 4 cut(s) 280, 401, 454, 990
BsmAI GTCTC 2 cut(s) 69, 616
BsnI GGCC 2 cut(s) 273, 440
Bsp119I TTCGAA 1 cut(s) 329
Bsp1286I GDGCHC 1 cut(s) 946
Bsp13I TCCGGA 1 cut(s) 292
Bsp143I GATC 5 cut(s) 94, 102, 475, 504, 685
BspACI CCGC 1 cut(s) 782
BspANI GGCC 2 cut(s) 273, 440
BspCNI CTCAG 1 cut(s) 169
BspDI ATCGAT 2 cut(s) 192, 495
BspEI TCCGGA 1 cut(s) 292
BspHI TCATGA 3 cut(s) 30, 99, 688
BspLI GGNNCC 3 cut(s) 285, 446, 472
BspQI GCTCTTC 2 cut(s) 886, 918
BspT104I TTCGAA 1 cut(s) 329
BspT107I GGYRCC 1 cut(s) 470
BsrDI GCAATG 1 cut(s) 876
BsrFI RCCGGY 1 cut(s) 394
BsrI ACTGG 1 cut(s) 358
BssAI RCCGGY 1 cut(s) 394
BssMI GATC 5 cut(s) 94, 102, 475, 504, 685
BssNI GRCGYC 1 cut(s) 150
BssSI CACGAG 2 cut(s) 386, 656
Bst2BI CACGAG 2 cut(s) 386, 656
Bst2UI CCWGG 2 cut(s) 442, 957
Bst4CI ACNGT 4 cut(s) 205, 280, 434, 587
Bst6I CTCTTC 3 cut(s) 886, 918, 975
BstACI GRCGYC 1 cut(s) 150
BstBI TTCGAA 1 cut(s) 329
BstC8I GCNNGC 1 cut(s) 605
BstDEI CTNAG 2 cut(s) 60, 156
BstHHI GCGC 1 cut(s) 242
BstKTI GATC 5 cut(s) 97, 105, 478, 507, 688
BstMAI GTCTC 2 cut(s) 69, 616
BstMBI GATC 5 cut(s) 94, 102, 475, 504, 685
BstMWI GCNNNNNNNGC 3 cut(s) 419, 613, 950
BstNI CCWGG 2 cut(s) 442, 957
BstSCI CCNGG 2 cut(s) 440, 955
BstV2I GAAGAC 2 cut(s) 330, 671
Bsu15I ATCGAT 2 cut(s) 192, 495
BsuRI GGCC 2 cut(s) 273, 440
BsuTUI ATCGAT 2 cut(s) 192, 495
BtgZI GCGATG 1 cut(s) 857
Cac8I GCNNGC 1 cut(s) 605
CciI TCATGA 3 cut(s) 30, 99, 688
CfoI GCGC 1 cut(s) 242
Cfr10I RCCGGY 1 cut(s) 394
ClaI ATCGAT 2 cut(s) 192, 495
CseI GACGC 1 cut(s) 139
Csp6I GTAC 2 cut(s) 471, 633
CspAI ACCGGT 1 cut(s) 394
CviAII CATG 6 cut(s) 31, 100, 288, 304, 689, 935
CviQI GTAC 2 cut(s) 471, 633
DdeI CTNAG 2 cut(s) 60, 156
DpnI GATC 5 cut(s) 96, 104, 477, 506, 687
DpnII GATC 5 cut(s) 94, 102, 475, 504, 685
EaeI YGGCCR 1 cut(s) 438
Eam1104I CTCTTC 3 cut(s) 886, 918, 975
EarI CTCTTC 3 cut(s) 886, 918, 975
Ecl136II GAGCTC 1 cut(s) 944
Eco147I AGGCCT 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 946
Eco53kI GAGCTC 1 cut(s) 944
Eco57I CTGAAG 1 cut(s) 899
EcoICRI GAGCTC 1 cut(s) 944
EcoRII CCWGG 2 cut(s) 440, 955
EcoT38I GRGCYC 1 cut(s) 946
FaeI CATG 6 cut(s) 34, 103, 291, 307, 692, 938
FalI AAGNNNNNCTT 2 cut(s) 897, 929
FatI CATG 6 cut(s) 30, 99, 287, 303, 688, 934
FbaI TGATCA 3 cut(s) 102, 504, 685
FriOI GRGCYC 1 cut(s) 946
FspBI CTAG 3 cut(s) 528, 963, 975
GlaI GCGC 1 cut(s) 241
GsaI CCCAGC 1 cut(s) 827
HaeIII GGCC 2 cut(s) 273, 440
HapII CCGG 3 cut(s) 293, 369, 395
HgaI GACGC 1 cut(s) 139
HhaI GCGC 1 cut(s) 242
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 6 cut(s) 34, 103, 291, 307, 692, 938
Hin6I GCGC 1 cut(s) 240
HinP1I GCGC 1 cut(s) 240
HinfI GANTC 3 cut(s) 5, 73, 300
HpaII CCGG 3 cut(s) 293, 369, 395
HphI GGTGA 3 cut(s) 384, 748, 862
Hpy188I TCNGA 3 cut(s) 107, 159, 985
Hpy188III TCNNGA 7 cut(s) 31, 92, 100, 293, 502, 658, 689
Hpy99I CGWCG 1 cut(s) 733
HpyAV CCTTC 3 cut(s) 183, 686, 847
HpyCH4III ACNGT 4 cut(s) 205, 280, 434, 587
HpyCH4IV ACGT 1 cut(s) 596
HpyF10VI GCNNNNNNNGC 3 cut(s) 419, 613, 950
HpyF3I CTNAG 2 cut(s) 60, 156
HpySE526I ACGT 1 cut(s) 596
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 6 cut(s) 34, 103, 291, 307, 692, 938
HspAI GCGC 1 cut(s) 240
Kpn2I TCCGGA 1 cut(s) 292
KpnI GGTACC 1 cut(s) 474
Ksp22I TGATCA 3 cut(s) 102, 504, 685
Kzo9I GATC 5 cut(s) 94, 102, 475, 504, 685
LguI GCTCTTC 2 cut(s) 886, 918
LmnI GCTCC 4 cut(s) 283, 812, 949, 958
LweI GCATC 1 cut(s) 731
MaeI CTAG 3 cut(s) 528, 963, 975
MaeII ACGT 1 cut(s) 596
MaeIII GTNAC 4 cut(s) 151, 371, 390, 587
MalI GATC 5 cut(s) 96, 104, 477, 506, 687
MboI GATC 5 cut(s) 94, 102, 475, 504, 685
MfeI CAATTG 1 cut(s) 68
MhlI GDGCHC 1 cut(s) 946
MlsI TGGCCA 1 cut(s) 440
MluNI TGGCCA 1 cut(s) 440
MlyI GAGTC 1 cut(s) 309
MmeI TCCRAC 1 cut(s) 752
MnlI CCTC 4 cut(s) 448, 727, 746, 749
Mox20I TGGCCA 1 cut(s) 440
MroI TCCGGA 1 cut(s) 292
MroXI GAANNNNTTC 1 cut(s) 912
MscI TGGCCA 1 cut(s) 440
MseI TTAA 4 cut(s) 129, 212, 459, 491
MslI CAYNNNNRTG 2 cut(s) 29, 693
Msp20I TGGCCA 1 cut(s) 440
MspI CCGG 3 cut(s) 293, 369, 395
MspR9I CCNGG 2 cut(s) 442, 957
MunI CAATTG 1 cut(s) 68
MvaI CCWGG 2 cut(s) 442, 957
MwoI GCNNNNNNNGC 3 cut(s) 419, 613, 950
NdeII GATC 5 cut(s) 94, 102, 475, 504, 685
NlaIII CATG 6 cut(s) 34, 103, 291, 307, 692, 938
NlaIV GGNNCC 3 cut(s) 285, 446, 472
NmuCI GTSAC 2 cut(s) 151, 390
NspV TTCGAA 1 cut(s) 329
PagI TCATGA 3 cut(s) 30, 99, 688
PceI AGGCCT 1 cut(s) 273
PciSI GCTCTTC 2 cut(s) 886, 918
PdmI GAANNNNTTC 1 cut(s) 912
PfeI GAWTC 2 cut(s) 5, 73
PflFI GACNNNGTC 1 cut(s) 203
PfoI TCCNGGA 1 cut(s) 955
PinAI ACCGGT 1 cut(s) 394
PleI GAGTC 1 cut(s) 308
PpsI GAGTC 1 cut(s) 308
PsiI TTATAA 2 cut(s) 360, 417
Psp124BI GAGCTC 1 cut(s) 946
Psp1406I AACGTT 1 cut(s) 596
Psp6I CCWGG 2 cut(s) 440, 955
PspFI CCCAGC 1 cut(s) 823
PspGI CCWGG 2 cut(s) 440, 955
PspN4I GGNNCC 3 cut(s) 285, 446, 472
PsyI GACNNNGTC 1 cut(s) 203
RsaI GTAC 2 cut(s) 472, 634
RsaNI GTAC 2 cut(s) 471, 633
RseI CAYNNNNRTG 2 cut(s) 29, 693
SacI GAGCTC 1 cut(s) 946
SapI GCTCTTC 2 cut(s) 886, 918
SaqAI TTAA 4 cut(s) 129, 212, 459, 491
Sau3AI GATC 5 cut(s) 94, 102, 475, 504, 685
SchI GAGTC 1 cut(s) 309
ScrFI CCNGG 2 cut(s) 442, 957
SduI GDGCHC 1 cut(s) 946
SfaNI GCATC 1 cut(s) 731
SfuI TTCGAA 1 cut(s) 329
SmiMI CAYNNNNRTG 2 cut(s) 29, 693
SseBI AGGCCT 1 cut(s) 273
SsiI CCGC 1 cut(s) 782
SspMI CTAG 3 cut(s) 528, 963, 975
SstI GAGCTC 1 cut(s) 946
StuI AGGCCT 1 cut(s) 273
StyD4I CCNGG 2 cut(s) 440, 955
TaaI ACNGT 4 cut(s) 205, 280, 434, 587
TaiI ACGT 1 cut(s) 599
TaqI TCGA 4 cut(s) 192, 329, 495, 728
TfiI GAWTC 2 cut(s) 5, 73
Tru1I TTAA 4 cut(s) 129, 212, 459, 491
Tru9I TTAA 4 cut(s) 129, 212, 459, 491
TseFI GTSAC 2 cut(s) 151, 390
Tsp45I GTSAC 2 cut(s) 151, 390
TspDTI ATGAA 3 cut(s) 677, 705, 915
TspGWI ACGGA 2 cut(s) 746, 765
Tth111I GACNNNGTC 1 cut(s) 203
XapI RAATTY 1 cut(s) 978
XmnI GAANNNNTTC 1 cut(s) 912
XspI CTAG 3 cut(s) 528, 963, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.