AT4G14385

Histone acetyltransferase subunit NuA4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006357
Physical Location & Seq
Reverse (-)
8286745 .. 8288952
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14385.9

Sequence Viewer

Length: 492 bp
ATGTCGTTAGGGCAAAAGAGTTCGACGGATCCTGGTGCGATGCTCACTTCTCTTCTGAACAAGCGAGAGAAGCTTCGCCAAGAGTTACGAAGCATCGAGAAACAGGTTTATGAATTGGAGACAAGCTATCTTCAAGAATCGAGTCATATTGGAAATGCTTTGAAAGGCTTTGAAGGGTTTTTGTCTTCCTCCAAGAGTACTGCTAGTGCTAAAAGGTCAAGGAAGTTTCAGCCTGAAGACAGAGTCTTCTCATTGTCCTCAGTTACATCACCAGCTGCTGAAGAACTTGGTGTTGGAAGAGAAGATGGACGAGCTGAATTAGGGCCAGGGCGATCCAAGGGTGGTTTGTCGACACAGGGAAAGCCGAAGAAAGGGAGAGGACAATCAATAATAGCAAGAGAGGCAAAGAGAAGCAGACCATCTACAGAACCAGATTATGAAGATGAAGATGATCCTGATATGAATATGTATGGCCATGGTTCACTCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NuA4

Protein Analysis

163

Amino Acids

17.82

Weight (kDa)

8.8

Isoelectric Point (pI)

66.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NuA4 PF09340 15 - 91 3.3e-28 Histone acetyltransferase subunit NuA4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 350
AclWI GGATC 4 cut(s) 23, 36, 327, 446
AcoI YGGCCR 1 cut(s) 472
AcuI CTGAAG 2 cut(s) 255, 300
AfaI GTAC 1 cut(s) 199
AfiI CCNNNNNNNGG 1 cut(s) 371
AgsI TTSAA 3 cut(s) 134, 163, 173
AjnI CCWGG 2 cut(s) 31, 325
AjuI GAANNNNNNNTTGG 2 cut(s) 276, 308
AluBI AGCT 4 cut(s) 73, 126, 275, 314
AluI AGCT 4 cut(s) 73, 126, 275, 314
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 4 cut(s) 23, 36, 327, 446
AlwNI CAGNNNCTG 1 cut(s) 278
AoxI GGCC 2 cut(s) 323, 472
ApeKI GCWGC 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 323
AsuHPI GGTGA 1 cut(s) 261
BalI TGGCCA 1 cut(s) 474
BamHI GGATCC 1 cut(s) 28
BbsI GAAGAC 3 cut(s) 177, 238, 243
BbvI GCAGC 1 cut(s) 262
BccI CCATC 2 cut(s) 299, 427
BciT130I CCWGG 2 cut(s) 33, 327
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 1 cut(s) 204
BfmI CTRYAG 1 cut(s) 423
BisI GCNGC 1 cut(s) 276
BlsI GCNGC 1 cut(s) 277
BmcAI AGTACT 1 cut(s) 199
Bme1390I CCNGG 2 cut(s) 33, 327
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 1 cut(s) 30
BmrFI CCNGG 2 cut(s) 33, 327
BmsI GCATC 2 cut(s) 30, 102
BpiI GAAGAC 3 cut(s) 177, 238, 243
BsaJI CCNNGG 3 cut(s) 326, 336, 475
Bsc4I CCNNNNNNNGG 1 cut(s) 371
BseBI CCWGG 2 cut(s) 33, 327
BseDI CCNNGG 3 cut(s) 326, 336, 475
BseLI CCNNNNNNNGG 1 cut(s) 371
BseMII CTCAG 1 cut(s) 273
BseXI GCAGC 1 cut(s) 262
BshFI GGCC 2 cut(s) 325, 474
BslI CCNNNNNNNGG 1 cut(s) 371
BsmAI GTCTC 1 cut(s) 113
BsnI GGCC 2 cut(s) 325, 474
Bsp143I GATC 3 cut(s) 28, 332, 451
Bsp19I CCATGG 1 cut(s) 475
BspANI GGCC 2 cut(s) 325, 474
BspCNI CTCAG 1 cut(s) 272
BspLI GGNNCC 1 cut(s) 30
BspPI GGATC 4 cut(s) 23, 36, 327, 446
BssECI CCNNGG 3 cut(s) 326, 336, 475
BssMI GATC 3 cut(s) 28, 332, 451
BssT1I CCWWGG 2 cut(s) 336, 475
Bst2UI CCWGG 2 cut(s) 33, 327
Bst6I CTCTTC 2 cut(s) 57, 292
BstDEI CTNAG 1 cut(s) 259
BstDSI CCRYGG 1 cut(s) 475
BstKTI GATC 3 cut(s) 31, 335, 454
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 3 cut(s) 28, 332, 451
BstMWI GCNNNNNNNGC 2 cut(s) 70, 401
BstNI CCWGG 2 cut(s) 33, 327
BstSCI CCNGG 2 cut(s) 31, 325
BstSFI CTRYAG 1 cut(s) 423
BstV1I GCAGC 1 cut(s) 262
BstV2I GAAGAC 3 cut(s) 177, 238, 243
BstX2I RGATCY 1 cut(s) 28
BstYI RGATCY 1 cut(s) 28
BsuRI GGCC 2 cut(s) 325, 474
BtgI CCRYGG 1 cut(s) 475
BtgZI GCGATG 1 cut(s) 53
CaiI CAGNNNCTG 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 323
Csp6I GTAC 1 cut(s) 198
CviAII CATG 1 cut(s) 476
CviJI RGCY 9 cut(s) 73, 126, 168, 232, 275, 314, 325, 364, 474
CviKI_1 RGCY 9 cut(s) 73, 126, 168, 232, 275, 314, 325, 364, 474
CviQI GTAC 1 cut(s) 198
DdeI CTNAG 1 cut(s) 259
DpnI GATC 3 cut(s) 30, 334, 453
DpnII GATC 3 cut(s) 28, 332, 451
EaeI YGGCCR 1 cut(s) 472
Eam1104I CTCTTC 2 cut(s) 57, 292
EarI CTCTTC 2 cut(s) 57, 292
Eco130I CCWWGG 2 cut(s) 336, 475
Eco57I CTGAAG 2 cut(s) 255, 300
EcoRII CCWGG 2 cut(s) 31, 325
EcoT14I CCWWGG 2 cut(s) 336, 475
ErhI CCWWGG 2 cut(s) 336, 475
FaeI CATG 1 cut(s) 479
FaiI YATR 7 cut(s) 111, 147, 438, 461, 467, 471, 477
FatI CATG 1 cut(s) 475
FblI GTMKAC 1 cut(s) 350
Fnu4HI GCNGC 1 cut(s) 276
Fsp4HI GCNGC 1 cut(s) 276
FspBI CTAG 1 cut(s) 204
GluI GCNGC 1 cut(s) 276
HaeIII GGCC 2 cut(s) 325, 474
Hin1II CATG 1 cut(s) 479
HincII GTYRAC 1 cut(s) 351
HindII GTYRAC 1 cut(s) 351
HindIII AAGCTT 1 cut(s) 71
HinfI GANTC 3 cut(s) 137, 142, 243
HphI GGTGA 1 cut(s) 261
Hpy166II GTNNAC 2 cut(s) 351, 482
Hpy188I TCNGA 1 cut(s) 57
Hpy188III TCNNGA 3 cut(s) 97, 134, 455
Hpy8I GTNNAC 2 cut(s) 351, 482
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 167
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 401
HpyF3I CTNAG 1 cut(s) 259
Hsp92II CATG 1 cut(s) 479
Kzo9I GATC 3 cut(s) 28, 332, 451
Lsp1109I GCAGC 1 cut(s) 262
LweI GCATC 2 cut(s) 30, 102
MaeI CTAG 1 cut(s) 204
MaeIII GTNAC 2 cut(s) 84, 262
MalI GATC 3 cut(s) 30, 334, 453
MboI GATC 3 cut(s) 28, 332, 451
MflI RGATCY 1 cut(s) 28
MlsI TGGCCA 1 cut(s) 474
MluCI AATT 2 cut(s) 113, 317
MluNI TGGCCA 1 cut(s) 474
MlyI GAGTC 2 cut(s) 151, 252
MmeI TCCRAC 1 cut(s) 274
MnlI CCTC 4 cut(s) 199, 268, 371, 394
Mox20I TGGCCA 1 cut(s) 474
MscI TGGCCA 1 cut(s) 474
Msp20I TGGCCA 1 cut(s) 474
MspA1I CMGCKG 1 cut(s) 275
MspR9I CCNGG 2 cut(s) 33, 327
MvaI CCWGG 2 cut(s) 33, 327
MwoI GCNNNNNNNGC 2 cut(s) 70, 401
NcoI CCATGG 1 cut(s) 475
NdeII GATC 3 cut(s) 28, 332, 451
NlaIII CATG 1 cut(s) 479
NlaIV GGNNCC 1 cut(s) 30
PfeI GAWTC 1 cut(s) 137
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 1 cut(s) 277
PleI GAGTC 2 cut(s) 150, 251
PpsI GAGTC 2 cut(s) 150, 251
Psp6I CCWGG 2 cut(s) 31, 325
PspGI CCWGG 2 cut(s) 31, 325
PspN4I GGNNCC 1 cut(s) 30
PspPI GGNCC 1 cut(s) 323
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 1 cut(s) 28
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 1 cut(s) 199
RsaNI GTAC 1 cut(s) 198
SalI GTCGAC 1 cut(s) 349
SatI GCNGC 1 cut(s) 276
Sau3AI GATC 3 cut(s) 28, 332, 451
Sau96I GGNCC 1 cut(s) 323
ScaI AGTACT 1 cut(s) 199
SchI GAGTC 2 cut(s) 151, 252
ScrFI CCNGG 2 cut(s) 33, 327
SetI ASST 6 cut(s) 75, 108, 128, 218, 277, 316
SfaNI GCATC 2 cut(s) 30, 102
SfcI CTRYAG 1 cut(s) 423
Sse9I AATT 2 cut(s) 113, 317
SspMI CTAG 1 cut(s) 204
StyD4I CCNGG 2 cut(s) 31, 325
StyI CCWWGG 2 cut(s) 336, 475
TaqI TCGA 4 cut(s) 23, 96, 140, 350
TasI AATT 2 cut(s) 113, 317
TatI WGTACW 1 cut(s) 197
TfiI GAWTC 1 cut(s) 137
TseI GCWGC 1 cut(s) 275
TspDTI ATGAA 4 cut(s) 126, 453, 459, 476
TspGWI ACGGA 1 cut(s) 41
Tth111I GACNNNGTC 1 cut(s) 242
XmiI GTMKAC 1 cut(s) 350
XspI CTAG 1 cut(s) 204
ZrmI AGTACT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.