AT4G15470

Belongs to the BI1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0012389
Physical Location & Seq
Forward (+)
8843519 .. 8845810
2292 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15470.1

Sequence Viewer

Length: 771 bp
ATGGACAAACCGTACGGATACGCGAGCGTGAGCATGAGCGGCATAGATCGTTCCGCCGGAAAGGATATTGATCTTGAGATGGGAGTCGGAGAAGCGACGCTTTATCCTGGGCTAAGTTACGGCGAGAATCAGCTCCGATGGGGATTTATTCGTAAGGTCTATGGGATTCTCTCAGCTCAGCTTCTTCTTACGACGCTTATCTCCGCCGTCGTTGTTCTTAATCCTCCTGTTAACGATCTCTTGACCGGATCTCCTGGGATTCTTCTCTTCCTCTGCATCGTTCCCTTCATCTTAATCTGGCCTCTGCACATTTACCACCAGAAGCATCCTGTTAACCTGATCCTCCTTGCCCTCTTCACTGTTTCATTGAGTTTCACTGTTGGTGTCAGTTGTGCTATGACAGAAGGACGAATTGTGCTACAAGCCTTGATATTGACTCTGTCTGTGGTCGGATCTCTAACCGCATACACTTTCTGGGCTGCAAAGAAGGGAAAAGACTTCAGCTTCCTTGGACCCATTCTCTTCACCAGCCTCATCATTCTTGTAGTGACCAGCTTCATCCAGATGTTCTTCCCTCTTGGCCCGACTTCTGTTGCCGTATACGGAGGATTCAGTGCCTTGGTATTCTGCGGATACATAGTCTATGATACCGACAACCTCATCAAGCGTTTCACATATGACGAATACATCCTAGCATCAGTAGCTCTCTACTTGGACATCCTCAATCTCTTCTTGACCATATTGCGTATACTGAGGCAAGGCGACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bax1-I

Protein Analysis

256

Amino Acids

28.17

Weight (kDa)

6.27

Isoelectric Point (pI)

31.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bax1-I PF01027 48 - 251 6.6e-51 Inhibitor of apoptosis-promoting Bax1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012389)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15470
fragaria_vesca FvH4_4g14100
malus_domestica MD13G1179700.v1.1 MD16G1180700.v1.1
prunus_persica Prupe.1G148200_v2.0.a1 Prupe.1G148200_v2.0.a1
pyrus_communis pycom13g15490 pycom16g15180
rosa_chinensis RchiOBHm_Chr4g0419241
rosa_laevigata RLG00000007822
rosa_multiflora Rmu_sc0004932.1_g000001 Rmu_sc0019148.1_g000001
rosa_roxburghii Rroxscaffold_5G00362220
rosa_rugosa Rorug04G0157600
rosa_samantha Rh4AG219600 Rh4BG221100 Rh4CG232200 Rh4DG218600
rosa_wichuraiana Rw4G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 39
AccI GTMKAC 2 cut(s) 600, 748
AccII CGCG 1 cut(s) 23
AciI CCGC 5 cut(s) 39, 54, 204, 462, 630
AclWI GGATC 3 cut(s) 256, 334, 460
AcuI CTGAAG 1 cut(s) 484
AfaI GTAC 1 cut(s) 14
AjnI CCWGG 2 cut(s) 106, 253
AluBI AGCT 6 cut(s) 133, 176, 181, 504, 555, 704
AluI AGCT 6 cut(s) 133, 176, 181, 504, 555, 704
AlwI GGATC 3 cut(s) 256, 334, 460
AoxI GGCC 2 cut(s) 299, 580
ApeKI GCWGC 1 cut(s) 479
AspS9I GGNCC 2 cut(s) 512, 581
AsuHPI GGTGA 1 cut(s) 517
AvaII GGWCC 1 cut(s) 512
BbvI GCAGC 1 cut(s) 466
BccI CCATC 2 cut(s) 73, 132
BceAI ACGGC 3 cut(s) 136, 191, 581
BciT130I CCWGG 2 cut(s) 108, 255
BciVI GTATCC 2 cut(s) 11, 626
BfaI CTAG 1 cut(s) 692
BfuI GTATCC 2 cut(s) 11, 626
BisI GCNGC 2 cut(s) 40, 480
BlpI GCTNAGC 1 cut(s) 177
BlsI GCNGC 2 cut(s) 41, 481
Bme1390I CCNGG 2 cut(s) 108, 255
Bme18I GGWCC 1 cut(s) 512
BmgT120I GGNCC 2 cut(s) 512, 581
BmiI GGNNCC 1 cut(s) 514
BmrFI CCNGG 2 cut(s) 108, 255
BmsI GCATC 3 cut(s) 285, 334, 704
Bpu1102I GCTNAGC 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 95
BsaBI GATNNNNATC 1 cut(s) 69
BsaJI CCNNGG 4 cut(s) 107, 254, 508, 618
BsaWI WCCGGW 1 cut(s) 245
BsaXI ACNNNNNCTCC 2 cut(s) 235, 265
Bse8I GATNNNNATC 1 cut(s) 69
BseBI CCWGG 2 cut(s) 108, 255
BseDI CCNNGG 4 cut(s) 107, 254, 508, 618
BseGI GGATG 4 cut(s) 325, 558, 687, 717
BseJI GATNNNNATC 1 cut(s) 69
BseMII CTCAG 3 cut(s) 186, 191, 743
BseXI GCAGC 1 cut(s) 466
BsgI GTGCAG 1 cut(s) 290
Bsh1236I CGCG 1 cut(s) 23
BshFI GGCC 2 cut(s) 301, 582
BsiSI CCGG 2 cut(s) 57, 246
BsiWI CGTACG 1 cut(s) 12
BsnI GGCC 2 cut(s) 301, 582
Bsp143I GATC 6 cut(s) 46, 70, 235, 248, 339, 452
Bsp1720I GCTNAGC 1 cut(s) 177
BspACI CCGC 5 cut(s) 39, 54, 204, 462, 630
BspANI GGCC 2 cut(s) 301, 582
BspCNI CTCAG 3 cut(s) 185, 190, 744
BspFNI CGCG 1 cut(s) 23
BspLI GGNNCC 1 cut(s) 514
BspPI GGATC 3 cut(s) 256, 334, 460
BsrBI CCGCTC 1 cut(s) 39
BssECI CCNNGG 4 cut(s) 107, 254, 508, 618
BssMI GATC 6 cut(s) 46, 70, 235, 248, 339, 452
BssNAI GTATAC 2 cut(s) 601, 749
BssT1I CCWWGG 2 cut(s) 508, 618
Bst1107I GTATAC 2 cut(s) 601, 749
Bst2UI CCWGG 2 cut(s) 108, 255
Bst4CI ACNGT 3 cut(s) 12, 361, 379
Bst6I CTCTTC 4 cut(s) 272, 359, 527, 734
BstC8I GCNNGC 1 cut(s) 25
BstDEI CTNAG 4 cut(s) 113, 172, 177, 752
BstF5I GGATG 4 cut(s) 325, 558, 687, 717
BstFNI CGCG 1 cut(s) 23
BstKTI GATC 6 cut(s) 49, 73, 238, 251, 342, 455
BstMBI GATC 6 cut(s) 46, 70, 235, 248, 339, 452
BstMWI GCNNNNNNNGC 2 cut(s) 39, 701
BstNI CCWGG 2 cut(s) 108, 255
BstSCI CCNGG 2 cut(s) 106, 253
BstUI CGCG 1 cut(s) 23
BstV1I GCAGC 1 cut(s) 466
BstX2I RGATCY 2 cut(s) 248, 452
BstYI RGATCY 2 cut(s) 248, 452
BstZ17I GTATAC 2 cut(s) 601, 749
BsuI GTATCC 2 cut(s) 11, 626
BsuRI GGCC 2 cut(s) 301, 582
BtsCI GGATG 4 cut(s) 325, 558, 687, 717
BtsIMutI CAGTG 3 cut(s) 357, 375, 619
Cac8I GCNNGC 1 cut(s) 25
Cfr13I GGNCC 2 cut(s) 512, 581
CseI GACGC 2 cut(s) 106, 202
Csp6I GTAC 1 cut(s) 13
CviAII CATG 1 cut(s) 34
CviQI GTAC 1 cut(s) 13
DdeI CTNAG 4 cut(s) 113, 172, 177, 752
DpnI GATC 6 cut(s) 48, 72, 237, 250, 341, 454
DpnII GATC 6 cut(s) 46, 70, 235, 248, 339, 452
Eam1104I CTCTTC 4 cut(s) 272, 359, 527, 734
EarI CTCTTC 4 cut(s) 272, 359, 527, 734
EciI GGCGGA 2 cut(s) 43, 193
Eco130I CCWWGG 2 cut(s) 508, 618
Eco47I GGWCC 1 cut(s) 512
Eco57I CTGAAG 1 cut(s) 484
EcoRII CCWGG 2 cut(s) 106, 253
EcoT14I CCWWGG 2 cut(s) 508, 618
ErhI CCWWGG 2 cut(s) 508, 618
FaeI CATG 1 cut(s) 37
FalI AAGNNNNNCTT 2 cut(s) 84, 116
FatI CATG 1 cut(s) 33
FauNDI CATATG 1 cut(s) 676
FblI GTMKAC 2 cut(s) 600, 748
Fnu4HI GCNGC 2 cut(s) 40, 480
FokI GGATG 4 cut(s) 312, 545, 674, 704
Fsp4HI GCNGC 2 cut(s) 40, 480
FspBI CTAG 1 cut(s) 692
GluI GCNGC 2 cut(s) 40, 480
HaeIII GGCC 2 cut(s) 301, 582
HapII CCGG 2 cut(s) 57, 246
HgaI GACGC 2 cut(s) 106, 202
Hin1II CATG 1 cut(s) 37
HincII GTYRAC 2 cut(s) 232, 334
HindII GTYRAC 2 cut(s) 232, 334
HinfI GANTC 6 cut(s) 84, 127, 166, 259, 436, 609
HpaI GTTAAC 2 cut(s) 232, 334
HpaII CCGG 2 cut(s) 57, 246
HphI GGTGA 1 cut(s) 517
Hpy166II GTNNAC 4 cut(s) 232, 334, 601, 749
Hpy188I TCNGA 3 cut(s) 89, 137, 452
Hpy188III TCNNGA 4 cut(s) 74, 241, 562, 733
Hpy8I GTNNAC 4 cut(s) 232, 334, 601, 749
Hpy99I CGWCG 3 cut(s) 100, 196, 212
HpyAV CCTTC 3 cut(s) 295, 398, 481
HpyCH4III ACNGT 3 cut(s) 12, 361, 379
HpyCH4V TGCA 3 cut(s) 276, 307, 482
HpyF10VI GCNNNNNNNGC 2 cut(s) 39, 701
HpyF3I CTNAG 4 cut(s) 113, 172, 177, 752
Hsp92II CATG 1 cut(s) 37
KspAI GTTAAC 2 cut(s) 232, 334
Kzo9I GATC 6 cut(s) 46, 70, 235, 248, 339, 452
LmnI GCTCC 1 cut(s) 138
Lsp1109I GCAGC 1 cut(s) 466
LweI GCATC 3 cut(s) 285, 334, 704
MaeI CTAG 1 cut(s) 692
MaeIII GTNAC 2 cut(s) 116, 547
MalI GATC 6 cut(s) 48, 72, 237, 250, 341, 454
MbiI CCGCTC 1 cut(s) 39
MboI GATC 6 cut(s) 46, 70, 235, 248, 339, 452
MboII GAAGA 7 cut(s) 176, 254, 259, 346, 514, 562, 721
MflI RGATCY 2 cut(s) 248, 452
MluCI AATT 1 cut(s) 411
MlyI GAGTC 2 cut(s) 93, 430
MmeI TCCRAC 2 cut(s) 67, 430
MseI TTAA 4 cut(s) 219, 231, 293, 333
MslI CAYNNNNRTG 1 cut(s) 563
MspI CCGG 2 cut(s) 57, 246
MspR9I CCNGG 2 cut(s) 108, 255
MvaI CCWGG 2 cut(s) 108, 255
MvnI CGCG 1 cut(s) 23
MwoI GCNNNNNNNGC 2 cut(s) 39, 701
NdeI CATATG 1 cut(s) 676
NdeII GATC 6 cut(s) 46, 70, 235, 248, 339, 452
NlaIII CATG 1 cut(s) 37
NlaIV GGNNCC 1 cut(s) 514
NmuCI GTSAC 1 cut(s) 547
PfeI GAWTC 4 cut(s) 127, 166, 259, 609
Pfl23II CGTACG 1 cut(s) 12
PflFI GACNNNGTC 1 cut(s) 439
PkrI GCNGC 2 cut(s) 41, 481
PleI GAGTC 2 cut(s) 92, 430
PpsI GAGTC 2 cut(s) 92, 430
Psp6I CCWGG 2 cut(s) 106, 253
PspGI CCWGG 2 cut(s) 106, 253
PspLI CGTACG 1 cut(s) 12
PspN4I GGNNCC 1 cut(s) 514
PspPI GGNCC 2 cut(s) 512, 581
PsuI RGATCY 2 cut(s) 248, 452
PsyI GACNNNGTC 1 cut(s) 439
RsaI GTAC 1 cut(s) 14
RsaNI GTAC 1 cut(s) 13
RseI CAYNNNNRTG 1 cut(s) 563
SaqAI TTAA 4 cut(s) 219, 231, 293, 333
SatI GCNGC 2 cut(s) 40, 480
Sau3AI GATC 6 cut(s) 46, 70, 235, 248, 339, 452
Sau96I GGNCC 2 cut(s) 512, 581
SchI GAGTC 2 cut(s) 93, 430
ScrFI CCNGG 2 cut(s) 108, 255
SetI ASST 9 cut(s) 135, 159, 178, 183, 339, 506, 557, 660, 706
SfaNI GCATC 3 cut(s) 285, 334, 704
SinI GGWCC 1 cut(s) 512
SmiMI CAYNNNNRTG 1 cut(s) 563
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
Sse9I AATT 1 cut(s) 411
SsiI CCGC 5 cut(s) 39, 54, 204, 462, 630
SspMI CTAG 1 cut(s) 692
StyD4I CCNGG 2 cut(s) 106, 253
StyI CCWWGG 2 cut(s) 508, 618
TaaI ACNGT 3 cut(s) 12, 361, 379
TasI AATT 1 cut(s) 411
TauI GCSGC 1 cut(s) 42
TfiI GAWTC 4 cut(s) 127, 166, 259, 609
Tru1I TTAA 4 cut(s) 219, 231, 293, 333
Tru9I TTAA 4 cut(s) 219, 231, 293, 333
TscAI CASTG 3 cut(s) 364, 382, 619
TseFI GTSAC 1 cut(s) 547
TseI GCWGC 1 cut(s) 479
Tsp45I GTSAC 1 cut(s) 547
TspDTI ATGAA 3 cut(s) 277, 354, 547
TspGWI ACGGA 2 cut(s) 30, 618
TspRI CASTG 3 cut(s) 364, 382, 619
Tth111I GACNNNGTC 1 cut(s) 439
VpaK11BI GGWCC 1 cut(s) 512
XmiI GTMKAC 2 cut(s) 600, 748
XspI CTAG 1 cut(s) 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.