Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003371

Physical Location & Seq

Genomic Coordinates Forward (+)

27508334 .. 27515627

Gene Structure 7294 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0157600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGCAGACGATATGGGTTCTGATACTACATGCGTCGGCAGCAAGCGAAGCGTGGAAGAGATCGTAGAGACTCAAACTGGGTCTCCGATTCCAGAGCAAGATAGCCACCACGCAAACTCGTCTGACATCGTTTCGCCTCTGAAACAAGACCACGAATTCATCCCCAAGACCCCGCCTTTCCTCGTCTCTGAGTCCTCCAAGAAGGTCAAGTCTTCACCTGACTACGGCCAAGATATGCCCGCTTCTGGGTTTTCTGTTTCTGATTCTGTGGGAAATGAAGTGGGTCTCTCTGGAATTCAAGAAAGCAAGAAGGAAGGCTTGGCTGCTGCTGAGAATCTCTTGGATGTGAAAAAGAAGCAATTGTTGGAGGAGGTTGAAGCCAATCTTGTGCCTGCAGAGAAAAAGGTCTCTTCTTTGAGAGTTGAAATAATTGATGAAACTGCATTGATTGAAACCTTCAAGCCAATGGGTTTTCTGGGTCATGCTAAATCTGGTGCACAGAGGAATGCAAAGCAAGAAGTTAATGGAAAGAAGGCAAGAAACCAACGAAGGAAAGAGAAGCTGGCAAATAGGTTCAAGCCTGAGAATACCATCCATGTGGCTCAACCTCCTCACAGCTCAGGAGCCAAGAAGATCACTTACTCGAGGATGGAGTTGGAGGCCATGCGGTTTGTGAACCTTGCAGAACAGAGGAAGCTGTGGGAACATGTGTACAATGGGCTTGGGCCAGTGGTGGCAAGGGAGTATGATGATCTGGCGGTCTCTAAGCATCAGAAGAACATCCAGTTCAACTCTGATCATCGTAAGCGCTATGGGAAGATGGACCAGGCACCTGGCATTCTTGGGGAATCATTAGGAAACTCGGTGAATAATGAAACCCAAGATGTCAGTCTCCTGGACCCTGTTTGCAGTTATAATGTTACTAATGAAGATGGGTATCCATTTCCAGAAAAAGAGTGCAGCGAAGATGATGACAGTGATGAAGAGTATGCTAGCATTCAGAGGCCTGCCTTTTTGGTTGAAGGAGAACCCAATTTTGATTCTGGGTCACCAGAAGATGGATTTGAGTACCTTAGGCGTGTCAGGTGGGAAGCTGCTCAAATTCCAAAAGTGAGGGTAGCCAAGGTTGATAGAAGCAAATTTAACAGAGAACAGAGTGATTATATGCCCAAAATTCCTGAGATTGCTGAATGTCCAGAACAATTGCTGTCGCTGAAACAATGGGAGGAGGCTTTTCTTGCCGATTTTTCAGATCTAAGGCTGGATCTGTCTCGTTTTGAGGGTTCTGGTGCCAACACATCTCAAGATTTGCAATCAAAAGTTATTCTTCACAAGAATTGCTCCTCCCATCAGCCACCGGTCAATATTGTTTTTGAAAATTTTGCTCATGTCAAATCTACGGAAATTGACTGCACGGAAAACTCCGATTATCAGCCATCCTTGTTGACTGCTGAAGGTGGTAGTGCCTCACCCCCTGTGGAAAACTTCAGTCCTAAAGCTTCTGTGGATCATAGTTCCAGAGACTCCCCGTTGTTGTCTGTGATTTTTAGATTGGACTCTGTTGCTAGAGTATCTATGTTGAGAAAACGCATAAAGGCAGCAGAGGACACCAGCACACTGTCAAGGGATGATTGCCTGTGGCTATTTGCGCTGTGTGCAGTTGTTGATACTCCACTGGATGCTGACACCAGTGCTTCTGTGCGGAGTCTGCTAAGGAAGTGTGCTGCATTGCGAGCTACAAAATCTACAGTTGACGATGAGTTAATAATGTTGAATATTCTTGCCACAATATCAGGTAGATATTTCGGGCAGTCAGAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

607

Amino Acids

67.36

Weight (kDa)

5.2

Isoelectric Point (pI)

54.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SIP1	PF04938	343 - 605	7.7e-46	Survival motor neuron (SMN) interacting protein 1 (SIP1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06250 AT3G06250 AT3G06250 AT5G18960 AT5G18960
fragaria_vesca	FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102
malus_domestica	MD13G1179800.v1.1 MD16G1181100.v1.1
prunus_persica	Prupe.1G148400_v2.0.a1 Prupe.1G148400_v2.0.a1
pyrus_communis	pycom13g15530 pycom16g15190
rosa_chinensis	RchiOBHm_Chr4g0419141
rosa_laevigata	RLG00000007823
rosa_multiflora	Rmu_sc0001826.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362200
rosa_rugosa	Rorug04G0157200 Rorug04G0157300 Rorug04G0157400 Rorug04G0157500 Rorug04G0157600
rosa_samantha	Rh4AG219200 Rh4BG220500 Rh4CG231400 Rh4DG218000
rosa_wichuraiana	Rw4G018700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	915
AccB1I	GGYRCC	2 cut(s)	829, 1289
AccB7I	CCANNNNNTGG	1 cut(s)	1058
AciI	CCGC	5 cut(s)	173, 240, 667, 758, 1702
AclWI	GGATC	2 cut(s)	1272, 1515
AcoI	YGGCCR	1 cut(s)	226
AcsI	RAATTY	6 cut(s)	155, 294, 1101, 1139, 1173, 1378
AcuI	CTGAAG	2 cut(s)	1471, 1473
AfaI	GTAC	2 cut(s)	713, 1070
AfeI	AGCGCT	1 cut(s)	809
AfiI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1058
AflIII	ACRYGT	1 cut(s)	706
AgeI	ACCGGT	1 cut(s)	1357
AjnI	CCWGG	3 cut(s)	825, 832, 894
AjuI	GAANNNNNNNTTGG	4 cut(s)	302, 334, 347, 379
AluBI	AGCT	6 cut(s)	562, 618, 697, 1094, 1499, 1736
AluI	AGCT	6 cut(s)	562, 618, 697, 1094, 1499, 1736
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 766, 896, 1275, 1515
Alw44I	GTGCAC	1 cut(s)	495
AlwI	GGATC	2 cut(s)	1272, 1515
Ama87I	CYCGRG	1 cut(s)	643
Aor51HI	AGCGCT	1 cut(s)	809
AoxI	GGCC	4 cut(s)	226, 660, 725, 1004
ApaLI	GTGCAC	1 cut(s)	495
ApeKI	GCWGC	7 cut(s)	39, 323, 326, 960, 1094, 1598, 1724
ApoI	RAATTY	6 cut(s)	155, 294, 1101, 1139, 1173, 1378
AsiGI	ACCGGT	1 cut(s)	1357
AspLEI	GCGC	2 cut(s)	810, 1651
AspS9I	GGNCC	3 cut(s)	725, 823, 898
AsuHPI	GGTGA	4 cut(s)	207, 877, 1041, 1461
AsuNHI	GCTAGC	1 cut(s)	992
AvaI	CYCGRG	1 cut(s)	643
AvaII	GGWCC	2 cut(s)	823, 898
AxyI	CCTNAGG	1 cut(s)	1073
BaeGI	GKGCMC	1 cut(s)	499
BanI	GGYRCC	2 cut(s)	829, 1289
BarI	GAAGNNNNNNTAC	2 cut(s)	623, 655
BbsI	GAAGAC	1 cut(s)	204
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	7 cut(s)	51, 310, 313, 972, 1081, 1610, 1711
BccI	CCATC	7 cut(s)	599, 643, 814, 926, 1052, 1356, 1444
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	3 cut(s)	827, 834, 896
BciVI	GTATCC	1 cut(s)	948
BclI	TGATCA	1 cut(s)	796
BcoDI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 766, 896, 1275, 1515
BfaI	CTAG	2 cut(s)	993, 1566
BfmI	CTRYAG	2 cut(s)	393, 1746
BfoI	RGCGCY	1 cut(s)	811
BfuI	GTATCC	1 cut(s)	948
BglII	AGATCT	1 cut(s)	1252
BisI	GCNGC	7 cut(s)	40, 324, 327, 961, 1095, 1599, 1725
BlsI	GCNGC	7 cut(s)	41, 325, 328, 962, 1096, 1600, 1726
Bme1390I	CCNGG	3 cut(s)	827, 834, 896
Bme18I	GGWCC	2 cut(s)	823, 898
BmeT110I	CYCGRG	1 cut(s)	643
BmgT120I	GGNCC	3 cut(s)	725, 823, 898
BmiI	GGNNCC	4 cut(s)	625, 831, 900, 1291
BmrFI	CCNGG	3 cut(s)	827, 834, 896
BmrI	ACTGGG	1 cut(s)	87
BmsI	GCATC	2 cut(s)	778, 1669
BmtI	GCTAGC	1 cut(s)	996
BmuI	ACTGGG	1 cut(s)	87
BpiI	GAAGAC	1 cut(s)	204
Bpu10I	CCTNAGC	2 cut(s)	619, 1712
BpuEI	CTTGAG	1 cut(s)	1287
BsaBI	GATNNNNATC	1 cut(s)	936
BsaI	GGTCTC	4 cut(s)	87, 290, 412, 766
BsaJI	CCNNGG	1 cut(s)	1122
BsaWI	WCCGGW	1 cut(s)	1357
BsaXI	ACNNNNNCTCC	2 cut(s)	67, 97
Bsc4I	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1058
Bse118I	RCCGGY	1 cut(s)	1357
Bse1I	ACTGG	5 cut(s)	82, 728, 784, 1680, 1689
Bse21I	CCTNAGG	1 cut(s)	1073
Bse3DI	GCAATG	1 cut(s)	1727
Bse8I	GATNNNNATC	1 cut(s)	936
BseBI	CCWGG	3 cut(s)	827, 834, 896
BseDI	CCNNGG	1 cut(s)	1122
BseGI	GGATG	8 cut(s)	159, 349, 591, 654, 780, 1436, 1633, 1684
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1058
BseMI	GCAATG	1 cut(s)	1727
BseMII	CTCAG	5 cut(s)	180, 321, 573, 633, 1170
BseNI	ACTGG	5 cut(s)	82, 728, 784, 1680, 1689
BseRI	GAGGAG	4 cut(s)	383, 600, 1241, 1333
BseSI	GKGCMC	1 cut(s)	499
BseXI	GCAGC	7 cut(s)	51, 310, 313, 972, 1081, 1610, 1711
BsgI	GTGCAG	3 cut(s)	979, 1396, 1677
BshFI	GGCC	4 cut(s)	228, 662, 727, 1006
BshNI	GGYRCC	2 cut(s)	829, 1289
BshTI	ACCGGT	1 cut(s)	1357
BsiHKAI	GWGCWC	1 cut(s)	499
BsiHKCI	CYCGRG	1 cut(s)	643
BsiSI	CCGG	1 cut(s)	1358
BslI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1058
BsmAI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 766, 896, 1275, 1515
BsmBI	CGTCTC	1 cut(s)	190
BsmI	GAATGC	3 cut(s)	511, 837, 996
BsnI	GGCC	4 cut(s)	228, 662, 727, 1006
Bso31I	GGTCTC	4 cut(s)	87, 290, 412, 766
BsoBI	CYCGRG	1 cut(s)	643
Bsp1286I	GDGCHC	1 cut(s)	499
Bsp1407I	TGTACA	1 cut(s)	711
Bsp143I	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
BspACI	CCGC	5 cut(s)	173, 240, 667, 758, 1702
BspANI	GGCC	4 cut(s)	228, 662, 727, 1006
BspCNI	CTCAG	5 cut(s)	181, 322, 574, 632, 1171
BspLI	GGNNCC	4 cut(s)	625, 831, 900, 1291
BspMAI	CTGCAG	1 cut(s)	397
BspOI	GCTAGC	1 cut(s)	996
BspPI	GGATC	2 cut(s)	1272, 1515
BspT107I	GGYRCC	2 cut(s)	829, 1289
BspTNI	GGTCTC	4 cut(s)	87, 290, 412, 766
BsrDI	GCAATG	1 cut(s)	1727
BsrFI	RCCGGY	1 cut(s)	1357
BsrGI	TGTACA	1 cut(s)	711
BsrI	ACTGG	5 cut(s)	82, 728, 784, 1680, 1689
BssAI	RCCGGY	1 cut(s)	1357
BssECI	CCNNGG	1 cut(s)	1122
BssMI	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
BssT1I	CCWWGG	1 cut(s)	1122
Bst2UI	CCWGG	3 cut(s)	827, 834, 896
Bst4CI	ACNGT	3 cut(s)	977, 1620, 1750
Bst6I	CTCTTC	3 cut(s)	51, 415, 978
BstAUI	TGTACA	1 cut(s)	711
BstC8I	GCNNGC	7 cut(s)	44, 240, 393, 564, 994, 1008, 1734
BstDEI	CTNAG	9 cut(s)	189, 330, 582, 619, 765, 1073, 1179, 1256, 1712
BstEII	GGTNACC	1 cut(s)	1047
BstF5I	GGATG	8 cut(s)	159, 349, 591, 654, 780, 1436, 1633, 1684
BstH2I	RGCGCY	1 cut(s)	811
BstHHI	GCGC	2 cut(s)	810, 1651
BstKTI	GATC	7 cut(s)	63, 636, 754, 799, 1255, 1267, 1510
BstMAI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 766, 896, 1275, 1515
BstMBI	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 48, 1238, 1648, 1655, 1708, 1733
BstNI	CCWGG	3 cut(s)	827, 834, 896
BstNSI	RCATGY	2 cut(s)	33, 710
BstPI	GGTNACC	1 cut(s)	1047
BstSCI	CCNGG	3 cut(s)	825, 832, 894
BstSFI	CTRYAG	2 cut(s)	393, 1746
BstSLI	GKGCMC	1 cut(s)	499
BstV1I	GCAGC	7 cut(s)	51, 310, 313, 972, 1081, 1610, 1711
BstV2I	GAAGAC	1 cut(s)	204
BstX2I	RGATCY	2 cut(s)	1252, 1264
BstXI	CCANNNNNNTGG	2 cut(s)	598, 833
BstYI	RGATCY	2 cut(s)	1252, 1264
Bsu36I	CCTNAGG	1 cut(s)	1073
BsuI	GTATCC	1 cut(s)	948
BsuRI	GGCC	4 cut(s)	228, 662, 727, 1006
BtsCI	GGATG	8 cut(s)	159, 349, 591, 654, 780, 1436, 1633, 1684
BtsIMutI	CAGTG	5 cut(s)	735, 982, 1616, 1673, 1696
Cac8I	GCNNGC	7 cut(s)	44, 240, 393, 564, 994, 1008, 1734
CfoI	GCGC	2 cut(s)	810, 1651
Cfr10I	RCCGGY	1 cut(s)	1357
Cfr13I	GGNCC	3 cut(s)	725, 823, 898
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	2 cut(s)	712, 1069
CspAI	ACCGGT	1 cut(s)	1357
CviAII	CATG	6 cut(s)	30, 482, 596, 664, 707, 1388
CviQI	GTAC	2 cut(s)	712, 1069
DdeI	CTNAG	9 cut(s)	189, 330, 582, 619, 765, 1073, 1179, 1256, 1712
DpnI	GATC	7 cut(s)	62, 635, 753, 798, 1254, 1266, 1509
DpnII	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
EaeI	YGGCCR	1 cut(s)	226
Eam1104I	CTCTTC	3 cut(s)	51, 415, 978
EarI	CTCTTC	3 cut(s)	51, 415, 978
Eco130I	CCWWGG	1 cut(s)	1122
Eco147I	AGGCCT	1 cut(s)	1006
Eco31I	GGTCTC	4 cut(s)	87, 290, 412, 766
Eco47I	GGWCC	2 cut(s)	823, 898
Eco47III	AGCGCT	1 cut(s)	809
Eco57I	CTGAAG	2 cut(s)	1471, 1473
Eco81I	CCTNAGG	1 cut(s)	1073
Eco88I	CYCGRG	1 cut(s)	643
Eco91I	GGTNACC	1 cut(s)	1047
EcoO65I	GGTNACC	1 cut(s)	1047
EcoRI	GAATTC	2 cut(s)	155, 294
EcoRII	CCWGG	3 cut(s)	825, 832, 894
EcoT14I	CCWWGG	1 cut(s)	1122
ErhI	CCWWGG	1 cut(s)	1122
Esp3I	CGTCTC	1 cut(s)	190
FaeI	CATG	6 cut(s)	33, 485, 599, 667, 710, 1391
FalI	AAGNNNNNCTT	6 cut(s)	302, 334, 369, 401, 1311, 1343
FatI	CATG	6 cut(s)	29, 481, 595, 663, 706, 1387
FauI	CCCGC	2 cut(s)	180, 247
FbaI	TGATCA	1 cut(s)	796
Fnu4HI	GCNGC	7 cut(s)	40, 324, 327, 961, 1095, 1599, 1725
FokI	GGATG	8 cut(s)	146, 356, 578, 661, 767, 1423, 1640, 1691
Fsp4HI	GCNGC	7 cut(s)	40, 324, 327, 961, 1095, 1599, 1725
FspBI	CTAG	2 cut(s)	993, 1566
GlaI	GCGC	2 cut(s)	809, 1650
GluI	GCNGC	7 cut(s)	40, 324, 327, 961, 1095, 1599, 1725
HaeII	RGCGCY	1 cut(s)	811
HaeIII	GGCC	4 cut(s)	228, 662, 727, 1006
HapII	CCGG	1 cut(s)	1358
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	2 cut(s)	810, 1651
Hin1II	CATG	6 cut(s)	33, 485, 599, 667, 710, 1391
Hin6I	GCGC	2 cut(s)	808, 1649
HinP1I	GCGC	2 cut(s)	808, 1649
HincII	GTYRAC	2 cut(s)	1446, 1753
HindII	GTYRAC	2 cut(s)	1446, 1753
HindIII	AAGCTT	1 cut(s)	1497
HpaII	CCGG	1 cut(s)	1358
HphI	GGTGA	4 cut(s)	207, 877, 1041, 1461
Hpy166II	GTNNAC	5 cut(s)	497, 676, 712, 1446, 1753
Hpy188III	TCNNGA	9 cut(s)	92, 291, 299, 621, 947, 1178, 1196, 1304, 1518
Hpy8I	GTNNAC	5 cut(s)	497, 676, 712, 1446, 1753
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	8 cut(s)	196, 304, 308, 466, 526, 543, 1016, 1448
HpyCH4III	ACNGT	3 cut(s)	977, 1620, 1750
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 48, 1238, 1648, 1655, 1708, 1733
HpyF3I	CTNAG	9 cut(s)	189, 330, 582, 619, 765, 1073, 1179, 1256, 1712
Hsp92II	CATG	6 cut(s)	33, 485, 599, 667, 710, 1391
HspAI	GCGC	2 cut(s)	808, 1649
Ksp22I	TGATCA	1 cut(s)	796
Kzo9I	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
LmnI	GCTCC	2 cut(s)	623, 1346
Lsp1109I	GCAGC	7 cut(s)	51, 310, 313, 972, 1081, 1610, 1711
LweI	GCATC	2 cut(s)	778, 1669
MaeI	CTAG	2 cut(s)	993, 1566
MaeIII	GTNAC	2 cut(s)	919, 1047
MalI	GATC	7 cut(s)	62, 635, 753, 798, 1254, 1266, 1509
MboI	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
MfeI	CAATTG	2 cut(s)	359, 1202
MflI	RGATCY	2 cut(s)	1252, 1264
MhlI	GDGCHC	1 cut(s)	499
MlyI	GAGTC	5 cut(s)	64, 200, 1517, 1550, 1714
MmeI	TCCRAC	2 cut(s)	345, 636
MseI	TTAA	3 cut(s)	522, 1143, 1763
MslI	CAYNNNNRTG	1 cut(s)	596
MspI	CCGG	1 cut(s)	1358
MspR9I	CCNGG	3 cut(s)	827, 834, 896
MunI	CAATTG	2 cut(s)	359, 1202
Mva1269I	GAATGC	3 cut(s)	511, 837, 996
MvaI	CCWGG	3 cut(s)	827, 834, 896
MwoI	GCNNNNNNNGC	7 cut(s)	39, 48, 1238, 1648, 1655, 1708, 1733
NdeII	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
NheI	GCTAGC	1 cut(s)	992
NlaIII	CATG	6 cut(s)	33, 485, 599, 667, 710, 1391
NlaIV	GGNNCC	4 cut(s)	625, 831, 900, 1291
NmuCI	GTSAC	1 cut(s)	1047
NspI	RCATGY	2 cut(s)	33, 710
PaeR7I	CTCGAG	1 cut(s)	643
PceI	AGGCCT	1 cut(s)	1006
PciI	ACATGT	1 cut(s)	706
PctI	GAATGC	3 cut(s)	511, 837, 996
PfeI	GAWTC	5 cut(s)	88, 263, 334, 848, 1040
PflMI	CCANNNNNTGG	1 cut(s)	1058
PfoI	TCCNGGA	1 cut(s)	894
PinAI	ACCGGT	1 cut(s)	1357
PkrI	GCNGC	7 cut(s)	41, 325, 328, 962, 1096, 1600, 1726
PleI	GAGTC	5 cut(s)	64, 199, 1517, 1550, 1713
PpsI	GAGTC	5 cut(s)	64, 199, 1517, 1550, 1713
PscI	ACATGT	1 cut(s)	706
PsiI	TTATAA	1 cut(s)	915
Psp6I	CCWGG	3 cut(s)	825, 832, 894
PspEI	GGTNACC	1 cut(s)	1047
PspGI	CCWGG	3 cut(s)	825, 832, 894
PspN4I	GGNNCC	4 cut(s)	625, 831, 900, 1291
PspPI	GGNCC	3 cut(s)	725, 823, 898
PspXI	VCTCGAGB	1 cut(s)	643
PstI	CTGCAG	1 cut(s)	397
PsuI	RGATCY	2 cut(s)	1252, 1264
RsaI	GTAC	2 cut(s)	713, 1070
RsaNI	GTAC	2 cut(s)	712, 1069
RseI	CAYNNNNRTG	1 cut(s)	596
SaqAI	TTAA	3 cut(s)	522, 1143, 1763
SatI	GCNGC	7 cut(s)	40, 324, 327, 961, 1095, 1599, 1725
Sau3AI	GATC	7 cut(s)	60, 633, 751, 796, 1252, 1264, 1507
Sau96I	GGNCC	3 cut(s)	725, 823, 898
SchI	GAGTC	5 cut(s)	64, 200, 1517, 1550, 1714
ScrFI	CCNGG	3 cut(s)	827, 834, 896
SduI	GDGCHC	1 cut(s)	499
SfaNI	GCATC	2 cut(s)	778, 1669
SfcI	CTRYAG	2 cut(s)	393, 1746
Sfr274I	CTCGAG	1 cut(s)	643
SinI	GGWCC	2 cut(s)	823, 898
SlaI	CTCGAG	1 cut(s)	643
SmiMI	CAYNNNNRTG	1 cut(s)	596
SmlI	CTYRAG	2 cut(s)	643, 1302
SmoI	CTYRAG	2 cut(s)	643, 1302
SseBI	AGGCCT	1 cut(s)	1006
SsiI	CCGC	5 cut(s)	173, 240, 667, 758, 1702
SspI	AATATT	2 cut(s)	1366, 1777
SspMI	CTAG	2 cut(s)	993, 1566
StuI	AGGCCT	1 cut(s)	1006
StyD4I	CCNGG	3 cut(s)	825, 832, 894
StyI	CCWWGG	1 cut(s)	1122
TaaI	ACNGT	3 cut(s)	977, 1620, 1750
TaqI	TCGA	1 cut(s)	644
TatI	WGTACW	1 cut(s)	711
TfiI	GAWTC	5 cut(s)	88, 263, 334, 848, 1040
Tru1I	TTAA	3 cut(s)	522, 1143, 1763
Tru9I	TTAA	3 cut(s)	522, 1143, 1763
TscAI	CASTG	5 cut(s)	735, 982, 1623, 1680, 1696
TseFI	GTSAC	1 cut(s)	1047
TseI	GCWGC	7 cut(s)	39, 323, 326, 960, 1094, 1598, 1724
Tsp45I	GTSAC	1 cut(s)	1047
TspDTI	ATGAA	6 cut(s)	148, 291, 450, 888, 942, 996
TspGWI	ACGGA	2 cut(s)	1415, 1430
TspRI	CASTG	5 cut(s)	735, 982, 1623, 1680, 1696
Van91I	CCANNNNNTGG	1 cut(s)	1058
VneI	GTGCAC	1 cut(s)	495
VpaK11BI	GGWCC	2 cut(s)	823, 898
XapI	RAATTY	6 cut(s)	155, 294, 1101, 1139, 1173, 1378
XceI	RCATGY	2 cut(s)	33, 710
XhoI	CTCGAG	1 cut(s)	643
XspI	CTAG	2 cut(s)	993, 1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.