Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003371

Physical Location & Seq

Genomic Coordinates Reverse (-)

21590579 .. 21593300

Gene Structure 2722 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007823

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGAATCCAGCTCCACCCACTTTACAGATATAAGAAGCTCAGATACTGATTCTAAGATTGAAGAATGCGTTAACAATGCATACCCTTTAAGAATGTTGATGCCTGCAATGAACATTGGTAGCACAGATGATGAAGGAGAATCGATTCTTGAACCGTATGTGGGGTTAGCCTTTGATTCAGCAGATGGTGCGCGTGAATTCTATACGCTTTATGCAGCAAGAACGGGATTTAAAGTTCGAATTGGTCAGTTGTATCGGTCAAGAACTGATGGTACAGTATCTGCTCGGAGATTTGTTTGCTCCAAGGAGGGATTTCAGACTAGTACACGGACGGGCTGTGGAGCACTGATAAGGGTGCAAAGACGCGATTCTGGGAAGTGGGTTATAGACCTTTTCCTGAAGAATCACAATCATGATCTTGGACCTACAGAGGGAAACCATTCTCAAATTTTGCAGCAGAAGATTCTAACAGCTAAACCTGTTGAAGTGTTCCATAGGCCAAAAAATAAGTTGATTGAGGAAGTTGAGGATGGACGACCTTGCCCATCTGGTGTTATTACTGCCAAACGTTCTAAACCTAATGGGGATGAAATGCAGTGTGAAGTTGAACCATCTGCAGGTCTAGGGTTCAATTCAGCCAACGAAGCATACCAATTTTATCATGCATATGCAGAAAACACAGGATTTAGGATCCGGATTGGTCAATTGTTTCGTTCAAAGCTTGATGGATCAATTACTTCCCGACGTTTTGTATGCTCAAGGGAAGGTTTTCAGCACCCATCAAGAGTTGGATGTGGAGCTTTTATGAGGATTAAGAGACAAGAATCTGGAAGGTGGGTAGTGGATCGTCTTGAAAAACATCATAACCATGTGCTTGATTCTCGACAGGAAGTTCAAAAGAAAAATCTTTCTGCTTCAAAAAAGTTCATAGAGGAGGAGAACGGCGGGCTGGATGATGAAGATATTGTTGACATAAACAATGGGAATCTTGTCAAAAGACGTCGAGAAAACCACATTGGAAGTGATTGGTACACTGTGCTTTTTGACTATTTTCAAACTAAACAGGCTGAAGATACAGGATTCTTTTATGCAGTAGAAGTTGATAATGGTAGTTGCATGAGTATTTTCTGGGCTGATGGGAGGTCTAGATTTTCATGCTCTCAGTTTGGTGATGCCATAATTTTTGACACCTCATATCGTAAAGGTATATATCTGGTTCCATTTGCCACTTTCATTGGAATCAACCACAACAGGCAACCGGTGCTTCTTGGCTGTGCCCTAATTGCTGATGAATCTGAAATGTCTTTTACTTGGTTGTTTCAAACATGGCTTAGGGCAATGTCAGGGCGTCGTCCTCTGTCCATAATAGCTGATCAAGATAATGCTATCCAGGAAGCCATCATTCAAGTGTTTCCAGGAACCCATCATCGTTTCTCCATGTGGCAGATAAAGGCAAAAGAATGTGAGCATCTGAGTTCGGTGCACAGTTCTTTTCATTTTGAATACGGAAAATGCATCAATCAGTCTCAAACATCTGATGAATTTGATACGGCGTGGAATTCTCTCCTCTGCAGGTACGGGTTGAAGGATAATACTTGGCTGAAAGCCATGTACGAAAAGCGCCAATGTTGGGTCCCACTATACTTGAGAGACAAAAGAACCAGTAGAAGAACAATGCAGAAGGCTGTATACACTGAACATCTTCAGGATATTTCAGAAAGAACTTCTACAATCCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

580

Amino Acids

66.34

Weight (kDa)

7.58

Isoelectric Point (pI)

54.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	66 - 140	5.2e-19	FAR1 DNA-binding domain
FAR1	PF03101	218 - 292	2.5e-18	FAR1 DNA-binding domain
MULE	PF10551	393 - 485	6.9e-25	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06250 AT3G06250 AT3G06250 AT5G18960 AT5G18960
fragaria_vesca	FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102
malus_domestica	MD13G1179800.v1.1 MD16G1181100.v1.1
prunus_persica	Prupe.1G148400_v2.0.a1 Prupe.1G148400_v2.0.a1
pyrus_communis	pycom13g15530 pycom16g15190
rosa_chinensis	RchiOBHm_Chr4g0419141
rosa_laevigata	RLG00000007823
rosa_multiflora	Rmu_sc0001826.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362200
rosa_rugosa	Rorug04G0157200 Rorug04G0157300 Rorug04G0157400 Rorug04G0157500 Rorug04G0157600
rosa_samantha	Rh4AG219200 Rh4BG220500 Rh4CG231400 Rh4DG218000
rosa_wichuraiana	Rw4G018700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1003
Acc36I	ACCTGC	2 cut(s)	608, 1563
AccI	GTMKAC	1 cut(s)	1689
AccII	CGCG	2 cut(s)	193, 366
AccIII	TCCGGA	1 cut(s)	693
AciI	CCGC	1 cut(s)	945
AclI	AACGTT	1 cut(s)	568
AclWI	GGATC	4 cut(s)	685, 698, 736, 852
AcsI	RAATTY	4 cut(s)	197, 447, 1541, 1558
AcuI	CTGAAG	3 cut(s)	419, 1089, 1688
AcyI	GRCGYC	2 cut(s)	1000, 1348
AfaI	GTAC	5 cut(s)	274, 325, 1031, 1577, 1613
AfiI	CCNNNNNNNGG	4 cut(s)	161, 431, 617, 1630
AgeI	ACCGGT	1 cut(s)	1258
AhlI	ACTAGT	1 cut(s)	320
AjnI	CCWGG	2 cut(s)	1389, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	999, 1031
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
AluBI	AGCT	6 cut(s)	12, 39, 473, 721, 800, 1370
AluI	AGCT	6 cut(s)	12, 39, 473, 721, 800, 1370
Alw21I	GWGCWC	2 cut(s)	346, 1485
Alw26I	GTCTC	3 cut(s)	811, 1530, 1644
Alw44I	GTGCAC	1 cut(s)	1481
AlwI	GGATC	4 cut(s)	685, 698, 736, 852
AlwNI	CAGNNNCTG	2 cut(s)	47, 281
Aor13HI	TCCGGA	1 cut(s)	693
AoxI	GGCC	1 cut(s)	497
ApaLI	GTGCAC	1 cut(s)	1481
ApeKI	GCWGC	2 cut(s)	215, 454
ApoI	RAATTY	4 cut(s)	197, 447, 1541, 1558
AsiGI	ACCGGT	1 cut(s)	1258
Asp700I	GAANNNNTTC	4 cut(s)	144, 439, 768, 1701
AspLEI	GCGC	2 cut(s)	193, 1623
AspS9I	GGNCC	2 cut(s)	422, 1633
AsuHPI	GGTGA	1 cut(s)	1181
AsuII	TTCGAA	1 cut(s)	238
AvaII	GGWCC	2 cut(s)	422, 1633
BaeGI	GKGCMC	2 cut(s)	1279, 1485
BamHI	GGATCC	1 cut(s)	690
BarI	GAAGNNNNNNTAC	4 cut(s)	28, 60, 1673, 1705
Bbv12I	GWGCWC	2 cut(s)	346, 1485
BbvI	GCAGC	2 cut(s)	227, 466
BceAI	ACGGC	2 cut(s)	958, 1566
BciT130I	CCWGG	2 cut(s)	1391, 1416
BclI	TGATCA	1 cut(s)	1372
BcoDI	GTCTC	3 cut(s)	811, 1530, 1644
BcuI	ACTAGT	1 cut(s)	320
BfaI	CTAG	3 cut(s)	321, 623, 1146
BfmI	CTRYAG	4 cut(s)	426, 615, 1570, 1736
BfoI	RGCGCY	1 cut(s)	1624
BfuAI	ACCTGC	2 cut(s)	608, 1563
BisI	GCNGC	2 cut(s)	216, 455
BlsI	GCNGC	2 cut(s)	217, 456
Bme1390I	CCNGG	2 cut(s)	1391, 1416
Bme18I	GGWCC	2 cut(s)	422, 1633
BmgT120I	GGNCC	2 cut(s)	422, 1633
BmiI	GGNNCC	5 cut(s)	692, 1218, 1420, 1634, 1635
BmrFI	CCNGG	2 cut(s)	1391, 1416
BmsI	GCATC	4 cut(s)	90, 1162, 1477, 1524
Bpu10I	CCTNAGC	1 cut(s)	1331
Bpu14I	TTCGAA	1 cut(s)	238
BpuEI	CTTGAG	2 cut(s)	742, 1666
Bsa29I	ATCGAT	1 cut(s)	143
BsaHI	GRCGYC	2 cut(s)	1000, 1348
BsaJI	CCNNGG	1 cut(s)	303
BsaWI	WCCGGW	2 cut(s)	693, 1258
Bsc4I	CCNNNNNNNGG	4 cut(s)	161, 431, 617, 1630
Bse118I	RCCGGY	1 cut(s)	1258
Bse1I	ACTGG	1 cut(s)	1662
Bse3DI	GCAATG	2 cut(s)	114, 1344
BseAI	TCCGGA	1 cut(s)	693
BseBI	CCWGG	2 cut(s)	1391, 1416
BseCI	ATCGAT	1 cut(s)	143
BseDI	CCNNGG	1 cut(s)	303
BseGI	GGATG	4 cut(s)	535, 592, 797, 958
BseLI	CCNNNNNNNGG	4 cut(s)	161, 431, 617, 1630
BseMI	GCAATG	2 cut(s)	114, 1344
BseMII	CTCAG	3 cut(s)	54, 1175, 1463
BseNI	ACTGG	1 cut(s)	1662
BseRI	GAGGAG	3 cut(s)	947, 950, 1556
BseSI	GKGCMC	2 cut(s)	1279, 1485
BseXI	GCAGC	2 cut(s)	227, 466
Bsh1236I	CGCG	2 cut(s)	193, 366
BshFI	GGCC	1 cut(s)	499
BshTI	ACCGGT	1 cut(s)	1258
BshVI	ATCGAT	1 cut(s)	143
BsiHKAI	GWGCWC	2 cut(s)	346, 1485
BsiSI	CCGG	2 cut(s)	694, 1259
BslFI	GGGAC	1 cut(s)	1619
BslI	CCNNNNNNNGG	4 cut(s)	161, 431, 617, 1630
BsmAI	GTCTC	3 cut(s)	811, 1530, 1644
BsmFI	GGGAC	1 cut(s)	1619
BsmI	GAATGC	1 cut(s)	71
BsnI	GGCC	1 cut(s)	499
Bsp119I	TTCGAA	1 cut(s)	238
Bsp1286I	GDGCHC	3 cut(s)	346, 1279, 1485
Bsp13I	TCCGGA	1 cut(s)	693
Bsp143I	GATC	5 cut(s)	415, 690, 728, 844, 1372
BspACI	CCGC	1 cut(s)	945
BspANI	GGCC	1 cut(s)	499
BspCNI	CTCAG	3 cut(s)	53, 1174, 1464
BspDI	ATCGAT	1 cut(s)	143
BspEI	TCCGGA	1 cut(s)	693
BspFNI	CGCG	2 cut(s)	193, 366
BspHI	TCATGA	1 cut(s)	412
BspLI	GGNNCC	5 cut(s)	692, 1218, 1420, 1634, 1635
BspMAI	CTGCAG	2 cut(s)	619, 1574
BspMI	ACCTGC	2 cut(s)	608, 1563
BspPI	GGATC	4 cut(s)	685, 698, 736, 852
BspT104I	TTCGAA	1 cut(s)	238
BsrDI	GCAATG	2 cut(s)	114, 1344
BsrFI	RCCGGY	1 cut(s)	1258
BsrI	ACTGG	1 cut(s)	1662
BssAI	RCCGGY	1 cut(s)	1258
BssECI	CCNNGG	1 cut(s)	303
BssMI	GATC	5 cut(s)	415, 690, 728, 844, 1372
BssNAI	GTATAC	1 cut(s)	1690
BssNI	GRCGYC	2 cut(s)	1000, 1348
BssT1I	CCWWGG	1 cut(s)	303
Bst1107I	GTATAC	1 cut(s)	1690
Bst2UI	CCWGG	2 cut(s)	1391, 1416
Bst4CI	ACNGT	4 cut(s)	156, 277, 1036, 1487
BstACI	GRCGYC	2 cut(s)	1000, 1348
BstAPI	GCANNNNNTGC	2 cut(s)	188, 1261
BstBI	TTCGAA	1 cut(s)	238
BstC8I	GCNNGC	2 cut(s)	105, 947
BstDEI	CTNAG	5 cut(s)	40, 54, 1161, 1331, 1472
BstF5I	GGATG	4 cut(s)	535, 592, 797, 958
BstFNI	CGCG	2 cut(s)	193, 366
BstH2I	RGCGCY	1 cut(s)	1624
BstHHI	GCGC	2 cut(s)	193, 1623
BstKTI	GATC	5 cut(s)	418, 693, 731, 847, 1375
BstMAI	GTCTC	3 cut(s)	811, 1530, 1644
BstMBI	GATC	5 cut(s)	415, 690, 728, 844, 1372
BstMWI	GCNNNNNNNGC	4 cut(s)	188, 644, 1261, 1283
BstNI	CCWGG	2 cut(s)	1391, 1416
BstSCI	CCNGG	2 cut(s)	1389, 1414
BstSFI	CTRYAG	4 cut(s)	426, 615, 1570, 1736
BstSLI	GKGCMC	2 cut(s)	1279, 1485
BstUI	CGCG	2 cut(s)	193, 366
BstV1I	GCAGC	2 cut(s)	227, 466
BstX2I	RGATCY	1 cut(s)	690
BstYI	RGATCY	1 cut(s)	690
BstZ17I	GTATAC	1 cut(s)	1690
Bsu15I	ATCGAT	1 cut(s)	143
BsuRI	GGCC	1 cut(s)	499
BsuTUI	ATCGAT	1 cut(s)	143
BtsCI	GGATG	4 cut(s)	535, 592, 797, 958
BtsI	GCAGTG	1 cut(s)	602
BtsIMutI	CAGTG	4 cut(s)	344, 602, 1032, 1692
BveI	ACCTGC	2 cut(s)	608, 1563
Cac8I	GCNNGC	2 cut(s)	105, 947
CaiI	CAGNNNCTG	2 cut(s)	47, 281
CciI	TCATGA	1 cut(s)	412
CfoI	GCGC	2 cut(s)	193, 1623
Cfr10I	RCCGGY	1 cut(s)	1258
Cfr13I	GGNCC	2 cut(s)	422, 1633
ClaI	ATCGAT	1 cut(s)	143
CseI	GACGC	2 cut(s)	372, 1337
Csp6I	GTAC	5 cut(s)	273, 324, 1030, 1576, 1612
CspAI	ACCGGT	1 cut(s)	1258
CspCI	CAANNNNNGTGG	4 cut(s)	1216, 1251, 1626, 1661
CviAII	CATG	8 cut(s)	413, 662, 869, 1117, 1155, 1326, 1438, 1609
CviQI	GTAC	5 cut(s)	273, 324, 1030, 1576, 1612
DdeI	CTNAG	5 cut(s)	40, 54, 1161, 1331, 1472
DpnI	GATC	5 cut(s)	417, 692, 730, 846, 1374
DpnII	GATC	5 cut(s)	415, 690, 728, 844, 1372
DraI	TTTAAA	1 cut(s)	232
Eco130I	CCWWGG	1 cut(s)	303
Eco47I	GGWCC	2 cut(s)	422, 1633
Eco57I	CTGAAG	3 cut(s)	419, 1089, 1688
EcoO109I	RGGNCCY	1 cut(s)	1633
EcoRI	GAATTC	2 cut(s)	197, 1558
EcoRII	CCWGG	2 cut(s)	1389, 1414
EcoT14I	CCWWGG	1 cut(s)	303
EcoT22I	ATGCAT	3 cut(s)	82, 667, 1517
ErhI	CCWWGG	1 cut(s)	303
FaeI	CATG	8 cut(s)	416, 665, 872, 1120, 1158, 1329, 1441, 1612
FaqI	GGGAC	1 cut(s)	1619
FatI	CATG	8 cut(s)	412, 661, 868, 1116, 1154, 1325, 1437, 1608
FauI	CCCGC	1 cut(s)	938
FauNDI	CATATG	1 cut(s)	667
FbaI	TGATCA	1 cut(s)	1372
FblI	GTMKAC	1 cut(s)	1689
Fnu4HI	GCNGC	2 cut(s)	216, 455
FokI	GGATG	4 cut(s)	542, 599, 804, 965
Fsp4HI	GCNGC	2 cut(s)	216, 455
FspBI	CTAG	3 cut(s)	321, 623, 1146
GlaI	GCGC	2 cut(s)	192, 1622
GluI	GCNGC	2 cut(s)	216, 455
HaeII	RGCGCY	1 cut(s)	1624
HaeIII	GGCC	1 cut(s)	499
HapII	CCGG	2 cut(s)	694, 1259
HgaI	GACGC	2 cut(s)	372, 1337
HhaI	GCGC	2 cut(s)	193, 1623
Hin1I	GRCGYC	2 cut(s)	1000, 1348
Hin1II	CATG	8 cut(s)	416, 665, 872, 1120, 1158, 1329, 1441, 1612
Hin6I	GCGC	2 cut(s)	191, 1621
HinP1I	GCGC	2 cut(s)	191, 1621
HincII	GTYRAC	2 cut(s)	73, 970
HindII	GTYRAC	2 cut(s)	73, 970
HindIII	AAGCTT	1 cut(s)	719
HpaI	GTTAAC	1 cut(s)	73
HpaII	CCGG	2 cut(s)	694, 1259
HphI	GGTGA	1 cut(s)	1181
Hpy166II	GTNNAC	6 cut(s)	73, 326, 970, 1032, 1483, 1690
Hpy188I	TCNGA	7 cut(s)	43, 288, 318, 1297, 1473, 1537, 1717
Hpy8I	GTNNAC	6 cut(s)	73, 326, 970, 1032, 1483, 1690
Hpy99I	CGWCG	3 cut(s)	747, 1005, 1353
HpyAV	CCTTC	5 cut(s)	128, 758, 825, 1579, 1675
HpyCH4III	ACNGT	4 cut(s)	156, 277, 1036, 1487
HpyCH4IV	ACGT	3 cut(s)	568, 745, 1000
HpyF10VI	GCNNNNNNNGC	4 cut(s)	188, 644, 1261, 1283
HpyF3I	CTNAG	5 cut(s)	40, 54, 1161, 1331, 1472
HpySE526I	ACGT	3 cut(s)	568, 745, 1000
Hsp92I	GRCGYC	2 cut(s)	1000, 1348
Hsp92II	CATG	8 cut(s)	416, 665, 872, 1120, 1158, 1329, 1441, 1612
HspAI	GCGC	2 cut(s)	191, 1621
KflI	GGGWCCC	1 cut(s)	1633
Kpn2I	TCCGGA	1 cut(s)	693
Ksp22I	TGATCA	1 cut(s)	1372
KspAI	GTTAAC	1 cut(s)	73
Kzo9I	GATC	5 cut(s)	415, 690, 728, 844, 1372
LmnI	GCTCC	4 cut(s)	17, 305, 341, 797
Lsp1109I	GCAGC	2 cut(s)	227, 466
LweI	GCATC	4 cut(s)	90, 1162, 1477, 1524
MaeI	CTAG	3 cut(s)	321, 623, 1146
MaeII	ACGT	3 cut(s)	568, 745, 1000
MalI	GATC	5 cut(s)	417, 692, 730, 846, 1374
MboI	GATC	5 cut(s)	415, 690, 728, 844, 1372
MboII	GAAGA	7 cut(s)	74, 412, 472, 971, 1082, 1680, 1694
MfeI	CAATTG	1 cut(s)	704
MflI	RGATCY	1 cut(s)	690
MhlI	GDGCHC	3 cut(s)	346, 1279, 1485
MmeI	TCCRAC	1 cut(s)	769
Mph1103I	ATGCAT	3 cut(s)	82, 667, 1517
MroI	TCCGGA	1 cut(s)	693
MroXI	GAANNNNTTC	4 cut(s)	144, 439, 768, 1701
MseI	TTAA	4 cut(s)	72, 89, 231, 813
MslI	CAYNNNNRTG	4 cut(s)	411, 666, 867, 1406
MspI	CCGG	2 cut(s)	694, 1259
MspR9I	CCNGG	2 cut(s)	1391, 1416
MunI	CAATTG	1 cut(s)	704
Mva1269I	GAATGC	1 cut(s)	71
MvaI	CCWGG	2 cut(s)	1391, 1416
MvnI	CGCG	2 cut(s)	193, 366
MwoI	GCNNNNNNNGC	4 cut(s)	188, 644, 1261, 1283
NdeI	CATATG	1 cut(s)	667
NdeII	GATC	5 cut(s)	415, 690, 728, 844, 1372
NlaIII	CATG	8 cut(s)	416, 665, 872, 1120, 1158, 1329, 1441, 1612
NlaIV	GGNNCC	5 cut(s)	692, 1218, 1420, 1634, 1635
NsiI	ATGCAT	3 cut(s)	82, 667, 1517
NspV	TTCGAA	1 cut(s)	238
PagI	TCATGA	1 cut(s)	412
PctI	GAATGC	1 cut(s)	71
PdmI	GAANNNNTTC	4 cut(s)	144, 439, 768, 1701
PfoI	TCCNGGA	2 cut(s)	1389, 1414
PinAI	ACCGGT	1 cut(s)	1258
PkrI	GCNGC	2 cut(s)	217, 456
PpuMI	RGGWCCY	1 cut(s)	1633
Psp1406I	AACGTT	1 cut(s)	568
Psp5II	RGGWCCY	1 cut(s)	1633
Psp6I	CCWGG	2 cut(s)	1389, 1414
PspGI	CCWGG	2 cut(s)	1389, 1414
PspN4I	GGNNCC	5 cut(s)	692, 1218, 1420, 1634, 1635
PspPI	GGNCC	2 cut(s)	422, 1633
PspPPI	RGGWCCY	1 cut(s)	1633
PsrI	GAACNNNNNNTAC	2 cut(s)	256, 288
PstI	CTGCAG	2 cut(s)	619, 1574
PstNI	CAGNNNCTG	2 cut(s)	47, 281
PsuI	RGATCY	1 cut(s)	690
RsaI	GTAC	5 cut(s)	274, 325, 1031, 1577, 1613
RsaNI	GTAC	5 cut(s)	273, 324, 1030, 1576, 1612
RseI	CAYNNNNRTG	4 cut(s)	411, 666, 867, 1406
SaqAI	TTAA	4 cut(s)	72, 89, 231, 813
SatI	GCNGC	2 cut(s)	216, 455
Sau3AI	GATC	5 cut(s)	415, 690, 728, 844, 1372
Sau96I	GGNCC	2 cut(s)	422, 1633
ScrFI	CCNGG	2 cut(s)	1391, 1416
SduI	GDGCHC	3 cut(s)	346, 1279, 1485
SfaNI	GCATC	4 cut(s)	90, 1162, 1477, 1524
SfcI	CTRYAG	4 cut(s)	426, 615, 1570, 1736
SfuI	TTCGAA	1 cut(s)	238
SinI	GGWCC	2 cut(s)	422, 1633
SmiMI	CAYNNNNRTG	4 cut(s)	411, 666, 867, 1406
SmlI	CTYRAG	2 cut(s)	757, 1645
SmoI	CTYRAG	2 cut(s)	757, 1645
SpeI	ACTAGT	1 cut(s)	320
SsiI	CCGC	1 cut(s)	945
SspMI	CTAG	3 cut(s)	321, 623, 1146
StyD4I	CCNGG	2 cut(s)	1389, 1414
StyI	CCWWGG	1 cut(s)	303
TaaI	ACNGT	4 cut(s)	156, 277, 1036, 1487
TaiI	ACGT	3 cut(s)	571, 748, 1003
TaqI	TCGA	4 cut(s)	143, 238, 883, 1003
TaqII	GACCGA	1 cut(s)	246
TatI	WGTACW	1 cut(s)	323
Tru1I	TTAA	4 cut(s)	72, 89, 231, 813
Tru9I	TTAA	4 cut(s)	72, 89, 231, 813
TscAI	CASTG	4 cut(s)	351, 602, 1039, 1699
TseI	GCWGC	2 cut(s)	215, 454
TspGWI	ACGGA	2 cut(s)	343, 1521
TspRI	CASTG	4 cut(s)	351, 602, 1039, 1699
VneI	GTGCAC	1 cut(s)	1481
VpaK11BI	GGWCC	2 cut(s)	422, 1633
XapI	RAATTY	4 cut(s)	197, 447, 1541, 1558
XbaI	TCTAGA	1 cut(s)	1145
XmiI	GTMKAC	1 cut(s)	1689
XmnI	GAANNNNTTC	4 cut(s)	144, 439, 768, 1701
XspI	CTAG	3 cut(s)	321, 623, 1146
ZraI	GACGTC	1 cut(s)	1001
Zsp2I	ATGCAT	3 cut(s)	82, 667, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.