Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003371

Physical Location & Seq

Genomic Coordinates Reverse (-)

17664827 .. 17671934

Gene Structure 7108 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g14102.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGAATCCAGCTCCACCCACTTCACAGATATGAGAAGCTCGGATACTGACTCTAAGATTGAAGAATGCGTGAACAACGCATACCCTCTAAGAATGTTGATGCCTGTGATGAACAATGCTAGCACAAATGATGAAGGAGAGTCGATTCTTGAACCATATGTGGGGTTAGCATTTGATTCAGCAGACGGTGCGCGCGAATTTTATACTCTTTATGCAGCAAGAATGGGATTTAAAGTTCGGATTGGTCAGTTGTATCGGTCAAGAACTGATGGTTCGGTATCTGCTCGGAGATTTGTTTGCTCCAAGGAGGGATTTCAGACCAGTACACGGACAGGCTGTGCAGCATTGATAAGGGTGCAGAGACGGGATTCTGGGAAGTGGGTTGTAGACCTTTTCCTGAAGAATCATAATCATGATCTTGGACCTACAGAGGGAAACCATTCTCTAATTTTGCAACAGAAGATTCTAACTGCTAAACCTGTTGAAGTGGTCCATAGGCCAAAATGCAAGTTGATTGAGGAAGTTGAGGATGGGCGACCTTGCCCATCTGGTGTAATTACTGCCAAACGTTCTAAACTGAATGGGGATGAAATGCAGTGTGAAGTTGAACCATCTTCAGGTCTAAAGTTCAATTCAGCCAACGAAGCATATCAATATTATCATGCATATGCAGAAAGAACCGGATTTAGGATCAGGATTGGTCAACTGTTTCGTTCAAAGCATGATGGTTCAATTTCTTCCCGACGTTTTGTATGCTCAAGGGAAGGTTTTCAGCACCCATCAAGAGTTGGATGTGGAGCTTTTATGAGGATTAAGAGACAAGAATCTGGAAGGTGGGTAGTGGATCGTCTTGAAAAACATCATAACCATGAGCTTGAGTCTCAACAGGAAGTTCAAAAGAAAAATCTTTCTGTTTCAAAAAAGTTCATAGAGGAGGAGAATGGTGGGCTGGATGATGAAGATATTGTTGACATAAACATTGGGAACCTTGTCAAAAAACGTCGAGAAAACCACAAGACGATCCATGAGCTTGAGTCTCAACAGGAAGTTCAAAAGAAAAATCTTTCTGTTTCAAAAAAGTTCATTTGGGAGGAGAATGGTGGGCTGGATGATGAAGATATTGTTGAAATAAACAGTGGGAACCTTGTCAAAAAACGTCGAGAAAACCACATTGGAAGTGATTGGTACAGTGTGCTTTTTGACTATTTTCAAACTAAACAGGCTGAAGATACAGGATTCTTTTATGCAGTAGAAGATGATTATGGTACCTGCATGAGTATTTTCTGGGCTGATGGGAGGTCTAGATTTTCATGCTCTCAATTTGGGGATGCCATAATTTTTGACACCTCATATCGTAAAGGTATGTATCTGGTTCCATTTGCCACTTTCATTGGAATCAACCACAATAGGCAACCGGTGCTTCTTGGCTGTGCCCTACTTGCTGATGAATCTGAAAAGTCTTTTACTTGGTTGTTTCAAACATGGCTTAGAGCAATGTCAGGACACCGTCCTTGGTCAATAATAGCTGATCAAGATGATATTATCCAGCAAGCCATCATCAATGTGTTTCCAGGAACCCATCATCGATTTTCCATGTGGCAGATGAAGGCAAAACAATATGAGCATCTAAGTTCGGTGCACAGTTCTTTTCAATTTGAATATGAAAAATGCATCAATCAGTCTCAAACAACTGATGAATTTGAAACGGCATGGAATTCACTCCTCTGCAGGTATGGGTTGAAGGATAATACTTGGCTGAAAGCCATGTACGAAAAGCGCCAATGTTGGGTCCCATTATACTTAAGAGCTACATTCTTTGCTGGCATCCCCTTGAGTGGAAATATAGAATCATTCTTTGGTACACTTGTGAATGGCCAAACACCACTTGTGGAGTTTGTTCCACTTTATGAAAAGGGTCTTGAACGACGTCGTGAAGAAGAATTAAAAGAGAATTTTAACTGTTCCATCTTGAATGCCTACTTGCAGACAAAAGAACCAGTAGAAGAACAATGCAGAAGGCTGTATACACTGAGCGTCTTCAGGATATTTCAGAAAGAACTTCTACAATCCTATAGTTATCTAGGATTTAAGGTTTATGAAGAAGCGGCTATCGTAAGGTATTTGGTCCGCAAATGTGGGAATGACGATGATGACAAATCCACAGTCACCATTGGTACATCCAATCACAATGTGCGGTGCAGCTGTCAAATGTTTGAATTTGAAGGTGTACTCTGTCGACATGTGCTGAGAGTTTTCCAAATATTAGAGATAAAGGAAGTTCCATCTCGCTATATCTTACGCCGCTGGAGGAAAAATGCTGAATATGGTCTGCCTCTTTATTCTGAATCAGGTGGCAGCCCTCAAGAAGTTAATGCCTCAATGGTATGGAGTTTGAGGGAAGAAGCCTGTAAATACATAGATGCTGGGGCGACATCTCTTGAGAAGCACAAAGTTGCCTATGAAATTTTGCATGAAGGTAGATTAAGGCTTGGTGGCCCCCCAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

836

Amino Acids

96.28

Weight (kDa)

6.69

Isoelectric Point (pI)

52.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	66 - 140	1.2e-19	FAR1 DNA-binding domain
FAR1	PF03101	218 - 293	7.7e-19	FAR1 DNA-binding domain
MULE	PF10551	445 - 536	3.5e-23	MULE transposase domain
SWIM	PF04434	731 - 753	4.9e-07	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06250 AT3G06250 AT3G06250 AT5G18960 AT5G18960
fragaria_vesca	FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102
malus_domestica	MD13G1179800.v1.1 MD16G1181100.v1.1
prunus_persica	Prupe.1G148400_v2.0.a1 Prupe.1G148400_v2.0.a1
pyrus_communis	pycom13g15530 pycom16g15190
rosa_chinensis	RchiOBHm_Chr4g0419141
rosa_laevigata	RLG00000007823
rosa_multiflora	Rmu_sc0001826.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362200
rosa_rugosa	Rorug04G0157200 Rorug04G0157300 Rorug04G0157400 Rorug04G0157500 Rorug04G0157600
rosa_samantha	Rh4AG219200 Rh4BG220500 Rh4CG231400 Rh4DG218000
rosa_wichuraiana	Rw4G018700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1930
Acc36I	ACCTGC	2 cut(s)	1277, 1719
Acc65I	GGTACC	1 cut(s)	1265
AccB1I	GGYRCC	1 cut(s)	1265
AccI	GTMKAC	3 cut(s)	387, 2024, 2236
AccII	CGCG	2 cut(s)	193, 195
AciI	CCGC	4 cut(s)	2105, 2128, 2194, 2302
AclI	AACGTT	1 cut(s)	568
AclWI	GGATC	3 cut(s)	698, 852, 1015
AcoI	YGGCCR	1 cut(s)	1873
AcsI	RAATTY	6 cut(s)	197, 1697, 1714, 1951, 2216, 2463
AcuI	CTGAAG	4 cut(s)	419, 600, 1245, 2023
AcyI	GRCGYC	1 cut(s)	1927
AdeI	CACNNNGTG	1 cut(s)	2191
AfaI	GTAC	7 cut(s)	325, 1187, 1267, 1769, 1861, 2176, 2229
AfiI	CCNNNNNNNGG	7 cut(s)	161, 327, 431, 617, 687, 1786, 1835
AflII	CTTAAG	1 cut(s)	1801
AflIII	ACRYGT	1 cut(s)	2239
AgeI	ACCGGT	1 cut(s)	1414
AjnI	CCWGG	1 cut(s)	1570
AjuI	GAANNNNNNNTTGG	4 cut(s)	1155, 1187, 1839, 1871
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
AluBI	AGCT	9 cut(s)	12, 39, 800, 874, 1030, 1526, 1808, 2202, 2505
AluI	AGCT	9 cut(s)	12, 39, 800, 874, 1030, 1526, 1808, 2202, 2505
Alw21I	GWGCWC	1 cut(s)	1641
Alw26I	GTCTC	5 cut(s)	355, 811, 885, 1041, 1686
Alw44I	GTGCAC	1 cut(s)	1637
AlwI	GGATC	3 cut(s)	698, 852, 1015
AoxI	GGCC	3 cut(s)	497, 1873, 2494
ApaLI	GTGCAC	1 cut(s)	1637
ApeKI	GCWGC	4 cut(s)	215, 341, 2199, 2355
ApoI	RAATTY	6 cut(s)	197, 1697, 1714, 1951, 2216, 2463
ArsI	GACNNNNNNTTYG	2 cut(s)	2148, 2180
AsiGI	ACCGGT	1 cut(s)	1414
Asp700I	GAANNNNTTC	2 cut(s)	439, 768
Asp718I	GGTACC	1 cut(s)	1265
AspLEI	GCGC	3 cut(s)	193, 195, 1779
AspS9I	GGNCC	5 cut(s)	422, 490, 1789, 2125, 2495
AsuHPI	GGTGA	1 cut(s)	2158
AsuNHI	GCTAGC	1 cut(s)	119
AvaII	GGWCC	4 cut(s)	422, 490, 1789, 2125
BaeGI	GKGCMC	2 cut(s)	1435, 1641
BaeI	ACNNNNGTAYC	2 cut(s)	1851, 1884
BalI	TGGCCA	1 cut(s)	1875
BanI	GGYRCC	1 cut(s)	1265
BarI	GAAGNNNNNNTAC	4 cut(s)	28, 60, 2008, 2040
BbsI	GAAGAC	1 cut(s)	2029
Bbv12I	GWGCWC	1 cut(s)	1641
BbvI	GCAGC	4 cut(s)	227, 353, 2211, 2367
BceAI	ACGGC	1 cut(s)	1722
BciT130I	CCWGG	1 cut(s)	1572
BciVI	GTATCC	1 cut(s)	37
BclI	TGATCA	1 cut(s)	1528
BcoDI	GTCTC	5 cut(s)	355, 811, 885, 1041, 1686
BfaI	CTAG	3 cut(s)	120, 1302, 2081
BfmI	CTRYAG	3 cut(s)	426, 1726, 2071
BfoI	RGCGCY	1 cut(s)	1780
BfrI	CTTAAG	1 cut(s)	1801
BfuAI	ACCTGC	2 cut(s)	1277, 1719
BfuI	GTATCC	1 cut(s)	37
BisI	GCNGC	6 cut(s)	216, 342, 2106, 2200, 2302, 2356
BlsI	GCNGC	6 cut(s)	217, 343, 2107, 2201, 2303, 2357
Bme1390I	CCNGG	1 cut(s)	1572
Bme18I	GGWCC	4 cut(s)	422, 490, 1789, 2125
BmgT120I	GGNCC	5 cut(s)	422, 490, 1789, 2125, 2495
BmiI	GGNNCC	8 cut(s)	986, 1142, 1267, 1374, 1576, 1790, 1791, 2497
BmrFI	CCNGG	1 cut(s)	1572
BmsI	GCATC	6 cut(s)	90, 1318, 1633, 1680, 1833, 2410
BmtI	GCTAGC	1 cut(s)	123
BpiI	GAAGAC	1 cut(s)	2029
BpmI	CTGGAG	1 cut(s)	2326
BpuEI	CTTGAG	6 cut(s)	742, 896, 1052, 1852, 2346, 2459
Bsa29I	ATCGAT	1 cut(s)	1585
BsaHI	GRCGYC	1 cut(s)	1927
BsaJI	CCNNGG	2 cut(s)	303, 1511
BsaWI	WCCGGW	2 cut(s)	680, 1414
Bsc4I	CCNNNNNNNGG	7 cut(s)	161, 327, 431, 617, 687, 1786, 1835
Bse118I	RCCGGY	1 cut(s)	1414
Bse1I	ACTGG	2 cut(s)	321, 1997
Bse3DI	GCAATG	1 cut(s)	1500
BseBI	CCWGG	1 cut(s)	1572
BseCI	ATCGAT	1 cut(s)	1585
BseDI	CCNNGG	2 cut(s)	303, 1511
BseGI	GGATG	8 cut(s)	535, 592, 797, 958, 1114, 1333, 1824, 2177
BseLI	CCNNNNNNNGG	7 cut(s)	161, 327, 431, 617, 687, 1786, 1835
BseMI	GCAATG	1 cut(s)	1500
BseMII	CTCAG	2 cut(s)	2021, 2237
BseNI	ACTGG	2 cut(s)	321, 1997
BsePI	GCGCGC	1 cut(s)	191
BseRI	GAGGAG	4 cut(s)	947, 950, 1106, 1712
BseSI	GKGCMC	2 cut(s)	1435, 1641
BseXI	GCAGC	4 cut(s)	227, 353, 2211, 2367
BseYI	CCCAGC	1 cut(s)	2423
BsgI	GTGCAG	3 cut(s)	360, 377, 2218
Bsh1236I	CGCG	2 cut(s)	193, 195
BshFI	GGCC	3 cut(s)	499, 1875, 2496
BshNI	GGYRCC	1 cut(s)	1265
BshTI	ACCGGT	1 cut(s)	1414
BshVI	ATCGAT	1 cut(s)	1585
BsiHKAI	GWGCWC	1 cut(s)	1641
BsiSI	CCGG	2 cut(s)	681, 1415
BslFI	GGGAC	1 cut(s)	1775
BslI	CCNNNNNNNGG	7 cut(s)	161, 327, 431, 617, 687, 1786, 1835
BsmAI	GTCTC	5 cut(s)	355, 811, 885, 1041, 1686
BsmBI	CGTCTC	1 cut(s)	355
BsmFI	GGGAC	1 cut(s)	1775
BsmI	GAATGC	2 cut(s)	71, 1978
BsnI	GGCC	3 cut(s)	499, 1875, 2496
Bsp1286I	GDGCHC	2 cut(s)	1435, 1641
Bsp143I	GATC	5 cut(s)	415, 690, 844, 1020, 1528
BspACI	CCGC	4 cut(s)	2105, 2128, 2194, 2302
BspANI	GGCC	3 cut(s)	499, 1875, 2496
BspCNI	CTCAG	2 cut(s)	2022, 2238
BspDI	ATCGAT	1 cut(s)	1585
BspFNI	CGCG	2 cut(s)	193, 195
BspHI	TCATGA	1 cut(s)	412
BspLI	GGNNCC	8 cut(s)	986, 1142, 1267, 1374, 1576, 1790, 1791, 2497
BspMAI	CTGCAG	1 cut(s)	1730
BspMI	ACCTGC	2 cut(s)	1277, 1719
BspOI	GCTAGC	1 cut(s)	123
BspPI	GGATC	3 cut(s)	698, 852, 1015
BspT107I	GGYRCC	1 cut(s)	1265
BspTI	CTTAAG	1 cut(s)	1801
BsrDI	GCAATG	1 cut(s)	1500
BsrFI	RCCGGY	1 cut(s)	1414
BsrI	ACTGG	2 cut(s)	321, 1997
BssAI	RCCGGY	1 cut(s)	1414
BssECI	CCNNGG	2 cut(s)	303, 1511
BssHII	GCGCGC	1 cut(s)	191
BssMI	GATC	5 cut(s)	415, 690, 844, 1020, 1528
BssNAI	GTATAC	1 cut(s)	2025
BssNI	GRCGYC	1 cut(s)	1927
BssT1I	CCWWGG	2 cut(s)	303, 1511
Bst1107I	GTATAC	1 cut(s)	2025
Bst2UI	CCWGG	1 cut(s)	1572
Bst4CI	ACNGT	8 cut(s)	188, 708, 1136, 1190, 1508, 1643, 1961, 2164
BstACI	GRCGYC	1 cut(s)	1927
BstAFI	CTTAAG	1 cut(s)	1801
BstAPI	GCANNNNNTGC	2 cut(s)	188, 1417
BstC8I	GCNNGC	4 cut(s)	121, 193, 1551, 1822
BstDEI	CTNAG	6 cut(s)	54, 89, 1487, 1628, 2030, 2246
BstF5I	GGATG	8 cut(s)	535, 592, 797, 958, 1114, 1333, 1824, 2177
BstFNI	CGCG	2 cut(s)	193, 195
BstH2I	RGCGCY	1 cut(s)	1780
BstHHI	GCGC	3 cut(s)	193, 195, 1779
BstKTI	GATC	5 cut(s)	418, 693, 847, 1023, 1531
BstMAI	GTCTC	5 cut(s)	355, 811, 885, 1041, 1686
BstMBI	GATC	5 cut(s)	415, 690, 844, 1020, 1528
BstMWI	GCNNNNNNNGC	5 cut(s)	188, 644, 1417, 1439, 2502
BstNI	CCWGG	1 cut(s)	1572
BstNSI	RCATGY	1 cut(s)	2243
BstSCI	CCNGG	1 cut(s)	1570
BstSFI	CTRYAG	3 cut(s)	426, 1726, 2071
BstSLI	GKGCMC	2 cut(s)	1435, 1641
BstUI	CGCG	2 cut(s)	193, 195
BstV1I	GCAGC	4 cut(s)	227, 353, 2211, 2367
BstV2I	GAAGAC	1 cut(s)	2029
BstZ17I	GTATAC	1 cut(s)	2025
Bsu15I	ATCGAT	1 cut(s)	1585
BsuI	GTATCC	1 cut(s)	37
BsuRI	GGCC	3 cut(s)	499, 1875, 2496
BsuTUI	ATCGAT	1 cut(s)	1585
BtsCI	GGATG	8 cut(s)	535, 592, 797, 958, 1114, 1333, 1824, 2177
BtsI	GCAGTG	1 cut(s)	602
BtsIMutI	CAGTG	4 cut(s)	602, 1141, 1195, 2027
BveI	ACCTGC	2 cut(s)	1277, 1719
Cac8I	GCNNGC	4 cut(s)	121, 193, 1551, 1822
CciI	TCATGA	1 cut(s)	412
CfoI	GCGC	3 cut(s)	193, 195, 1779
Cfr10I	RCCGGY	1 cut(s)	1414
Cfr13I	GGNCC	5 cut(s)	422, 490, 1789, 2125, 2495
ClaI	ATCGAT	1 cut(s)	1585
CseI	GACGC	1 cut(s)	2023
Csp6I	GTAC	7 cut(s)	324, 1186, 1266, 1768, 1860, 2175, 2228
CspAI	ACCGGT	1 cut(s)	1414
CspCI	CAANNNNNGTGG	2 cut(s)	1372, 1407
CviQI	GTAC	7 cut(s)	324, 1186, 1266, 1768, 1860, 2175, 2228
DdeI	CTNAG	6 cut(s)	54, 89, 1487, 1628, 2030, 2246
DpnI	GATC	5 cut(s)	417, 692, 846, 1022, 1530
DpnII	GATC	5 cut(s)	415, 690, 844, 1020, 1528
DraI	TTTAAA	1 cut(s)	232
DraIII	CACNNNGTG	1 cut(s)	2191
EaeI	YGGCCR	1 cut(s)	1873
Eco130I	CCWWGG	2 cut(s)	303, 1511
Eco47I	GGWCC	4 cut(s)	422, 490, 1789, 2125
Eco57I	CTGAAG	4 cut(s)	419, 600, 1245, 2023
EcoO109I	RGGNCCY	1 cut(s)	1789
EcoRI	GAATTC	1 cut(s)	1714
EcoRII	CCWGG	1 cut(s)	1570
EcoT14I	CCWWGG	2 cut(s)	303, 1511
EcoT22I	ATGCAT	2 cut(s)	667, 1673
ErhI	CCWWGG	2 cut(s)	303, 1511
Esp3I	CGTCTC	1 cut(s)	355
FaqI	GGGAC	1 cut(s)	1775
FauNDI	CATATG	2 cut(s)	157, 667
FbaI	TGATCA	1 cut(s)	1528
FblI	GTMKAC	3 cut(s)	387, 2024, 2236
Fnu4HI	GCNGC	6 cut(s)	216, 342, 2106, 2200, 2302, 2356
FokI	GGATG	8 cut(s)	542, 599, 804, 965, 1121, 1340, 1811, 2164
Fsp4HI	GCNGC	6 cut(s)	216, 342, 2106, 2200, 2302, 2356
FspBI	CTAG	3 cut(s)	120, 1302, 2081
GlaI	GCGC	3 cut(s)	192, 194, 1778
GluI	GCNGC	6 cut(s)	216, 342, 2106, 2200, 2302, 2356
GsaI	CCCAGC	1 cut(s)	2427
GsuI	CTGGAG	1 cut(s)	2326
HaeII	RGCGCY	1 cut(s)	1780
HaeIII	GGCC	3 cut(s)	499, 1875, 2496
HapII	CCGG	2 cut(s)	681, 1415
HgaI	GACGC	1 cut(s)	2023
HhaI	GCGC	3 cut(s)	193, 195, 1779
Hin1I	GRCGYC	1 cut(s)	1927
Hin6I	GCGC	3 cut(s)	191, 193, 1777
HinP1I	GCGC	3 cut(s)	191, 193, 1777
HincII	GTYRAC	3 cut(s)	704, 970, 2237
HindII	GTYRAC	3 cut(s)	704, 970, 2237
HpaII	CCGG	2 cut(s)	681, 1415
HphI	GGTGA	1 cut(s)	2158
Hpy188I	TCNGA	7 cut(s)	43, 240, 288, 318, 1453, 2052, 2344
Hpy99I	CGWCG	5 cut(s)	747, 1005, 1161, 1929, 1932
HpyAV	CCTTC	8 cut(s)	128, 758, 825, 1600, 1735, 2010, 2216, 2468
HpyCH4III	ACNGT	8 cut(s)	188, 708, 1136, 1190, 1508, 1643, 1961, 2164
HpyCH4IV	ACGT	5 cut(s)	568, 745, 1000, 1156, 1927
HpyF10VI	GCNNNNNNNGC	5 cut(s)	188, 644, 1417, 1439, 2502
HpyF3I	CTNAG	6 cut(s)	54, 89, 1487, 1628, 2030, 2246
HpySE526I	ACGT	5 cut(s)	568, 745, 1000, 1156, 1927
Hsp92I	GRCGYC	1 cut(s)	1927
HspAI	GCGC	3 cut(s)	191, 193, 1777
KflI	GGGWCCC	1 cut(s)	1789
KpnI	GGTACC	1 cut(s)	1269
Ksp22I	TGATCA	1 cut(s)	1528
Kzo9I	GATC	5 cut(s)	415, 690, 844, 1020, 1528
LmnI	GCTCC	3 cut(s)	17, 305, 797
Lsp1109I	GCAGC	4 cut(s)	227, 353, 2211, 2367
LweI	GCATC	6 cut(s)	90, 1318, 1633, 1680, 1833, 2410
MaeI	CTAG	3 cut(s)	120, 1302, 2081
MaeII	ACGT	5 cut(s)	568, 745, 1000, 1156, 1927
MaeIII	GTNAC	1 cut(s)	2164
MalI	GATC	5 cut(s)	417, 692, 846, 1022, 1530
MboI	GATC	5 cut(s)	415, 690, 844, 1020, 1528
MhlI	GDGCHC	2 cut(s)	1435, 1641
MlsI	TGGCCA	1 cut(s)	1875
MluNI	TGGCCA	1 cut(s)	1875
MlyI	GAGTC	4 cut(s)	44, 149, 887, 1043
MmeI	TCCRAC	1 cut(s)	769
Mox20I	TGGCCA	1 cut(s)	1875
Mph1103I	ATGCAT	2 cut(s)	667, 1673
MroXI	GAANNNNTTC	2 cut(s)	439, 768
MscI	TGGCCA	1 cut(s)	1875
MseI	TTAA	8 cut(s)	231, 813, 1802, 1943, 1956, 2088, 2370, 2483
MslI	CAYNNNNRTG	5 cut(s)	29, 411, 666, 867, 1562
Msp20I	TGGCCA	1 cut(s)	1875
MspA1I	CMGCKG	2 cut(s)	2202, 2304
MspCI	CTTAAG	1 cut(s)	1801
MspI	CCGG	2 cut(s)	681, 1415
MspR9I	CCNGG	1 cut(s)	1572
Mva1269I	GAATGC	2 cut(s)	71, 1978
MvaI	CCWGG	1 cut(s)	1572
MvnI	CGCG	2 cut(s)	193, 195
MwoI	GCNNNNNNNGC	5 cut(s)	188, 644, 1417, 1439, 2502
NdeI	CATATG	2 cut(s)	157, 667
NdeII	GATC	5 cut(s)	415, 690, 844, 1020, 1528
NheI	GCTAGC	1 cut(s)	119
NlaIV	GGNNCC	8 cut(s)	986, 1142, 1267, 1374, 1576, 1790, 1791, 2497
NmuCI	GTSAC	1 cut(s)	2164
NsiI	ATGCAT	2 cut(s)	667, 1673
NspI	RCATGY	1 cut(s)	2243
PagI	TCATGA	1 cut(s)	412
PauI	GCGCGC	1 cut(s)	191
PciI	ACATGT	1 cut(s)	2239
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PctI	GAATGC	2 cut(s)	71, 1978
PdmI	GAANNNNTTC	2 cut(s)	439, 768
PflFI	GACNNNGTC	1 cut(s)	1506
PfoI	TCCNGGA	1 cut(s)	1570
PinAI	ACCGGT	1 cut(s)	1414
PkrI	GCNGC	6 cut(s)	217, 343, 2107, 2201, 2303, 2357
PleI	GAGTC	4 cut(s)	44, 148, 886, 1042
PpsI	GAGTC	4 cut(s)	44, 148, 886, 1042
PpuMI	RGGWCCY	1 cut(s)	1789
PscI	ACATGT	1 cut(s)	2239
Psp1406I	AACGTT	1 cut(s)	568
Psp5II	RGGWCCY	1 cut(s)	1789
Psp6I	CCWGG	1 cut(s)	1570
PspFI	CCCAGC	1 cut(s)	2423
PspGI	CCWGG	1 cut(s)	1570
PspN4I	GGNNCC	8 cut(s)	986, 1142, 1267, 1374, 1576, 1790, 1791, 2497
PspPI	GGNCC	5 cut(s)	422, 490, 1789, 2125, 2495
PspPPI	RGGWCCY	1 cut(s)	1789
PsrI	GAACNNNNNNTAC	2 cut(s)	65, 97
PstI	CTGCAG	1 cut(s)	1730
PsyI	GACNNNGTC	1 cut(s)	1506
PteI	GCGCGC	1 cut(s)	191
PvuII	CAGCTG	1 cut(s)	2202
RsaI	GTAC	7 cut(s)	325, 1187, 1267, 1769, 1861, 2176, 2229
RsaNI	GTAC	7 cut(s)	324, 1186, 1266, 1768, 1860, 2175, 2228
RseI	CAYNNNNRTG	5 cut(s)	29, 411, 666, 867, 1562
SalI	GTCGAC	1 cut(s)	2235
SaqAI	TTAA	8 cut(s)	231, 813, 1802, 1943, 1956, 2088, 2370, 2483
SatI	GCNGC	6 cut(s)	216, 342, 2106, 2200, 2302, 2356
Sau3AI	GATC	5 cut(s)	415, 690, 844, 1020, 1528
Sau96I	GGNCC	5 cut(s)	422, 490, 1789, 2125, 2495
SchI	GAGTC	4 cut(s)	44, 149, 887, 1043
ScrFI	CCNGG	1 cut(s)	1572
SduI	GDGCHC	2 cut(s)	1435, 1641
SfaNI	GCATC	6 cut(s)	90, 1318, 1633, 1680, 1833, 2410
SfcI	CTRYAG	3 cut(s)	426, 1726, 2071
SinI	GGWCC	4 cut(s)	422, 490, 1789, 2125
SmiMI	CAYNNNNRTG	5 cut(s)	29, 411, 666, 867, 1562
SmlI	CTYRAG	7 cut(s)	757, 875, 1031, 1801, 1831, 2361, 2438
SmoI	CTYRAG	7 cut(s)	757, 875, 1031, 1801, 1831, 2361, 2438
SsiI	CCGC	4 cut(s)	2105, 2128, 2194, 2302
SspI	AATATT	2 cut(s)	656, 2262
SspMI	CTAG	3 cut(s)	120, 1302, 2081
StyD4I	CCNGG	1 cut(s)	1570
StyI	CCWWGG	2 cut(s)	303, 1511
TaaI	ACNGT	8 cut(s)	188, 708, 1136, 1190, 1508, 1643, 1961, 2164
TaiI	ACGT	5 cut(s)	571, 748, 1003, 1159, 1930
TaqI	TCGA	5 cut(s)	143, 1003, 1159, 1585, 2236
TaqII	GACCGA	1 cut(s)	246
TatI	WGTACW	2 cut(s)	323, 2227
TauI	GCSGC	2 cut(s)	2108, 2304
Tru1I	TTAA	8 cut(s)	231, 813, 1802, 1943, 1956, 2088, 2370, 2483
Tru9I	TTAA	8 cut(s)	231, 813, 1802, 1943, 1956, 2088, 2370, 2483
TscAI	CASTG	4 cut(s)	602, 1141, 1195, 2034
TseFI	GTSAC	1 cut(s)	2164
TseI	GCWGC	4 cut(s)	215, 341, 2199, 2355
Tsp45I	GTSAC	1 cut(s)	2164
TspGWI	ACGGA	1 cut(s)	343
TspRI	CASTG	4 cut(s)	602, 1141, 1195, 2034
Tth111I	GACNNNGTC	1 cut(s)	1506
Vha464I	CTTAAG	1 cut(s)	1801
VneI	GTGCAC	1 cut(s)	1637
VpaK11BI	GGWCC	4 cut(s)	422, 490, 1789, 2125
XapI	RAATTY	6 cut(s)	197, 1697, 1714, 1951, 2216, 2463
XbaI	TCTAGA	1 cut(s)	1301
XceI	RCATGY	1 cut(s)	2243
XmiI	GTMKAC	3 cut(s)	387, 2024, 2236
XmnI	GAANNNNTTC	2 cut(s)	439, 768
XspI	CTAG	3 cut(s)	120, 1302, 2081
ZraI	GACGTC	1 cut(s)	1928
Zsp2I	ATGCAT	2 cut(s)	667, 1673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.