Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003371

Physical Location & Seq

Genomic Coordinates Reverse (-)

1888834 .. 1892830

Gene Structure 3997 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGTTGTCAAAACTTATCCATTAGGAATGGTTGGGACTAACAATGGCATTGCTGAAAACGAAGGAGATTCTGGTCTTGAACCTTATGTTGGATTAGAGTTTGATACTGCTGAGGAAGCAAGGGACTACTACAACTCTTATGCTACGCGGACGGGTTTTAAGGTTAGGACGGGTCAGTTGTATAGATCTAGGACCGATGGTACAGTTTCATCGAGGAGGTTTGTTTGCTCAAAGGAAGGTTTTCAGCTTAATTCAAGAACCGGTTGTCCTGCGTTTATCCGAGTTCAGAGACGAGATACTGGCAAATGGGTTCTTGACCAGATTCAGAAAGAGCACAACCATGACCTTGGAGGTCATATAGAGGAGGCTCAGACTACTCCCCGTCCTTCTGTACAACAGAGAGCACCGGCTCCCACTAAGCTAGGCATATCGGTTCCACATAGACCCAAGATGAAAGTTGTTGACGAGGCTGATAAAGGAAGGTCATGCCCTTCTGGTGTGATCTCTTTTAAGCGCTTCAAAGGAGCTGAAGATAGTGATGGGCAAACTCAGCCCAAGGCCACTGAACCGTATGCAGGGTTGGAGTTCAACTCAGCTAATGAAGCGTGCCAGTTTTATCAAGCGTATGCTGAAGTTGTAGGTTTTAGAGTTCGAATAGGGCAGTTGTTTCGATCAAAAGTTGACGGTTCGATCACATCCAGAAGATTTGTTTGTTCGAAAGAGGGGTTTCAACATCCTTCGAGAATGGGTTGTGGAGCTTACATGAGGATCAAAAGGCAAGACTCTGGAGGTTGGATAGTCGACCGTCTCAATAAGGATCATAATCATGACCTTGAACCGGGAAAGAAGAATGCCGGTATGAAAAAGATAACAGATGATGTGACAGGAGGGTTGGATTCTGTGGATCTTATTGAACTAAACGACTTAAGCAATCACATCAGTAGTACCCGAGAAAACACCATAGGTAAGGAATGGTATCCAGTGCTTCTTGACTATTTTCAGTCAAAACAGGCAGAAGACATGGGATTCTTTTACGCCATCGAGCTTGATAGTAACGGAAGCTGCATGAGCATTTTCTGGGCAGATAGTCGGTCAAGATTCGCCTGCAGTCAATTTGGTGATGCTGTTGTTTTTGATACTTCATATAGAAAAGGAGACTACTCTGTTCCGTTTGCAACATTTATCGGTTTTAATCATCATAGGCAACCCGTGCTTCTCGGGGGTGCCTTAGTTGCTGATGAATCTAAAGAGGCTTTCTCATGGTTGTTTCAGACATGGCTTCGTGCAATGTCAGGCCGTCGTCCGAGATCTATGGTAGCTGATCAAGACTTGCCTATCCAACAAGCTGTGGCTCAAGTCTTTCCCGGGACTCATCACCGGTTCTCAGCGTGGCAAATAAGGTCCAAAGAACGAGAAAATCTCAGGTCGTTCCCGAATGAATTCAAGTACGAGTACGAGAAATGTTTATACCAGTCTCAGACAACGGTCGAGTTTGATACCATGTGGAGTTCTCTTGTAAACAAATACGGCCTTAGGGATAACATGTGGCTTAGAGAAATATATGAAAAGCGCGAGAAATGGGTACCGGCATATCTAAGAGCCAGTTTCTTTGGTGGAATCCATGTAGACGGCACCTTTGATCCGTTTTACGGCACTTCCCTTAATTCTCTAACGTCTCTTAGGGAGTTCATCTCACGGTATGAGCAAGGACTCGAGCAGCGCCGTGAAGAGGAAAGAAAAGAAGATTTCAATTCTTATAACTTGCAGCCGTTTCTGCAGACAAAAGAGCCCGTTGAAGAACAATGCAGAAGGTTGTACACGCTCACCATCTTCAGAATTTTCCAGAGCGAGCTTGCTCAGTCTTATAATTACCTCGGTTTAAAGACCTACGAGGAGGGAGCCATCAGCAGATTTCTAGTGAGGAAATGTGGGAACGAGAACGAGAAGCACGCCGTGACTTTCAGTGCATCGAATCTCAATGCAAGCTGCAGTTGTCAAATGTTTGAGTACGAAGGACTTCTCTGCAGACATATCTTGAAAGTGTTTAACCTCTTAGACATTCGAGAACTCCCATCTCGGTATATACTTCATCGCTGGACCAAAAACGCAGAGTTTGGGTTTGTACGAGATGTAGAATCAGGGGTGACTTCTCAGGACCTTAAGGCCTTGATGATCTGGAGCCTAAGGGAAGCAGCTTCAAAGTATATAGAGTTTGGGACATCGTCTCTGGAGAAGTATAAGCTTGCATATGAGATCATGCGAGAGGGTGGGAAGAAACTGTGTTGGCAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

764

Amino Acids

87.81

Weight (kDa)

8.32

Isoelectric Point (pI)

52.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	42 - 116	3.9e-19	FAR1 DNA-binding domain
FAR1	PF03101	204 - 279	8.8e-19	FAR1 DNA-binding domain
MULE	PF10551	376 - 467	1.8e-22	MULE transposase domain
SWIM	PF04434	657 - 684	8.3e-09	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06250 AT3G06250 AT3G06250 AT5G18960 AT5G18960
fragaria_vesca	FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102 FvH4_4g14102
malus_domestica	MD13G1179800.v1.1 MD16G1181100.v1.1
prunus_persica	Prupe.1G148400_v2.0.a1 Prupe.1G148400_v2.0.a1
pyrus_communis	pycom13g15530 pycom16g15190
rosa_chinensis	RchiOBHm_Chr4g0419141
rosa_laevigata	RLG00000007823
rosa_multiflora	Rmu_sc0001826.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362200
rosa_rugosa	Rorug04G0157200 Rorug04G0157300 Rorug04G0157400 Rorug04G0157500 Rorug04G0157600
rosa_samantha	Rh4AG219200 Rh4BG220500 Rh4CG231400 Rh4DG218000
rosa_wichuraiana	Rw4G018700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1758, 1866
Acc65I	GGTACC	1 cut(s)	1582
AccB1I	GGYRCC	3 cut(s)	1223, 1582, 1631
AccI	GTMKAC	2 cut(s)	801, 1626
AccII	CGCG	2 cut(s)	148, 1572
AciI	CCGC	1 cut(s)	148
AclWI	GGATC	4 cut(s)	776, 825, 912, 1634
AcsI	RAATTY	2 cut(s)	1439, 1836
AcuI	CTGAAG	3 cut(s)	549, 651, 1816
AdeI	CACNNNGTG	1 cut(s)	1954
AfaI	GTAC	9 cut(s)	202, 393, 946, 1448, 1454, 1584, 1817, 2009, 2124
AfeI	AGCGCT	1 cut(s)	515
AfiI	CCNNNNNNNGG	5 cut(s)	89, 575, 838, 1649, 1729
AflII	CTTAAG	2 cut(s)	925, 2159
AflIII	ACRYGT	1 cut(s)	1542
AgeI	ACCGGT	2 cut(s)	260, 1377
AjuI	GAANNNNNNNTTGG	2 cut(s)	72, 104
AloI	GAACNNNNNNTCC	2 cut(s)	250, 282
Alw21I	GWGCWC	2 cut(s)	336, 406
Alw26I	GTCTC	6 cut(s)	283, 812, 1149, 1479, 1680, 2229
AlwI	GGATC	4 cut(s)	776, 825, 912, 1634
Ama87I	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
Aor51HI	AGCGCT	1 cut(s)	515
AoxI	GGCC	4 cut(s)	558, 1294, 1528, 2163
ApeKI	GCWGC	5 cut(s)	1062, 1717, 1765, 1986, 2192
ApoI	RAATTY	2 cut(s)	1439, 1836
ArsI	GACNNNNNNTTYG	2 cut(s)	1619, 1651
AsiGI	ACCGGT	2 cut(s)	260, 1377
Asp700I	GAANNNNTTC	3 cut(s)	240, 1439, 2016
Asp718I	GGTACC	1 cut(s)	1582
AspLEI	GCGC	3 cut(s)	516, 1572, 1722
AspS9I	GGNCC	4 cut(s)	192, 1401, 2097, 2155
AsuC2I	CCSGG	3 cut(s)	840, 1365, 1366
AsuHPI	GGTGA	4 cut(s)	1130, 1367, 1816, 2155
AsuII	TTCGAA	2 cut(s)	652, 716
AvaI	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
AvaII	GGWCC	4 cut(s)	192, 1401, 2097, 2155
AxyI	CCTNAGG	2 cut(s)	1532, 2183
BanI	GGYRCC	3 cut(s)	1223, 1582, 1631
BanII	GRGCYC	1 cut(s)	1791
BbsI	GAAGAC	1 cut(s)	1023
Bbv12I	GWGCWC	2 cut(s)	336, 406
BbvCI	CCTCAGC	1 cut(s)	111
BbvI	GCAGC	5 cut(s)	1049, 1729, 1777, 1973, 2204
BccI	CCATC	6 cut(s)	191, 533, 1046, 1835, 1910, 2080
BceAI	ACGGC	7 cut(s)	1281, 1543, 1645, 1666, 1707, 1753, 1937
BcgI	CGANNNNNNTGC	2 cut(s)	650, 684
BciVI	GTATCC	1 cut(s)	987
BclI	TGATCA	1 cut(s)	1321
BcnI	CCSGG	3 cut(s)	840, 1365, 1366
BcoDI	GTCTC	6 cut(s)	283, 812, 1149, 1479, 1680, 2229
BfaI	CTAG	3 cut(s)	189, 422, 1916
BfmI	CTRYAG	4 cut(s)	1105, 1775, 1987, 2023
BfoI	RGCGCY	2 cut(s)	517, 1723
BfrI	CTTAAG	2 cut(s)	925, 2159
BfuI	GTATCC	1 cut(s)	987
BglII	AGATCT	2 cut(s)	185, 1307
BisI	GCNGC	5 cut(s)	1063, 1718, 1766, 1987, 2193
BlsI	GCNGC	5 cut(s)	1064, 1719, 1767, 1988, 2194
Bme1390I	CCNGG	3 cut(s)	840, 1365, 1366
Bme18I	GGWCC	4 cut(s)	192, 1401, 2097, 2155
BmeT110I	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
BmgT120I	GGNCC	4 cut(s)	192, 1401, 2097, 2155
BmiI	GGNNCC	7 cut(s)	411, 435, 1225, 1584, 1633, 1900, 2180
BmrFI	CCNGG	3 cut(s)	840, 1365, 1366
BmsI	GCATC	2 cut(s)	1111, 1976
BoxI	GACNNNNGTC	1 cut(s)	1484
BpiI	GAAGAC	1 cut(s)	1023
BplI	GAGNNNNNCTC	8 cut(s)	575, 607, 1241, 1273, 1404, 1436, 1676, 1708
BpmI	CTGGAG	3 cut(s)	807, 2197, 2249
Bpu10I	CCTNAGC	1 cut(s)	111
Bpu14I	TTCGAA	2 cut(s)	652, 716
BpuEI	CTTGAG	1 cut(s)	1338
BpuMI	CCSGG	3 cut(s)	840, 1365, 1366
BsaBI	GATNNNNATC	1 cut(s)	822
BsaJI	CCNNGG	4 cut(s)	346, 555, 1364, 1873
BsaWI	WCCGGW	2 cut(s)	260, 1377
Bsc4I	CCNNNNNNNGG	5 cut(s)	89, 575, 838, 1649, 1729
Bse118I	RCCGGY	5 cut(s)	260, 406, 854, 1377, 1585
Bse1I	ACTGG	5 cut(s)	304, 610, 980, 1471, 1602
Bse21I	CCTNAGG	2 cut(s)	1532, 2183
Bse3DI	GCAATG	2 cut(s)	48, 1293
Bse8I	GATNNNNATC	1 cut(s)	822
BseDI	CCNNGG	4 cut(s)	346, 555, 1364, 1873
BseGI	GGATG	2 cut(s)	695, 733
BseJI	GATNNNNATC	1 cut(s)	822
BseLI	CCNNNNNNNGG	5 cut(s)	89, 575, 838, 1649, 1729
BseMI	GCAATG	2 cut(s)	48, 1293
BseMII	CTCAG	9 cut(s)	102, 383, 563, 606, 1398, 1435, 1490, 1871, 2165
BseNI	ACTGG	5 cut(s)	304, 610, 980, 1471, 1602
BseRI	GAGGAG	3 cut(s)	229, 377, 1907
BseXI	GCAGC	5 cut(s)	1049, 1729, 1777, 1973, 2204
Bsh1236I	CGCG	2 cut(s)	148, 1572
Bsh1285I	CGRYCG	2 cut(s)	805, 1488
BshFI	GGCC	4 cut(s)	560, 1296, 1530, 2165
BshNI	GGYRCC	3 cut(s)	1223, 1582, 1631
BshTI	ACCGGT	2 cut(s)	260, 1377
BsiEI	CGRYCG	2 cut(s)	805, 1488
BsiHKAI	GWGCWC	2 cut(s)	336, 406
BsiHKCI	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
BsiSI	CCGG	7 cut(s)	261, 407, 839, 855, 1365, 1378, 1586
BslFI	GGGAC	4 cut(s)	49, 137, 1381, 2230
BslI	CCNNNNNNNGG	5 cut(s)	89, 575, 838, 1649, 1729
BsmAI	GTCTC	6 cut(s)	283, 812, 1149, 1479, 1680, 2229
BsmBI	CGTCTC	4 cut(s)	283, 812, 1680, 2229
BsmFI	GGGAC	4 cut(s)	49, 137, 1381, 2230
BsmI	GAATGC	1 cut(s)	856
BsnI	GGCC	4 cut(s)	560, 1296, 1530, 2165
BsoBI	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
Bsp119I	TTCGAA	2 cut(s)	652, 716
Bsp1286I	GDGCHC	3 cut(s)	336, 406, 1791
Bsp1407I	TGTACA	2 cut(s)	391, 1815
BspACI	CCGC	1 cut(s)	148
BspANI	GGCC	4 cut(s)	560, 1296, 1530, 2165
BspCNI	CTCAG	9 cut(s)	103, 382, 562, 605, 1397, 1434, 1489, 1870, 2164
BspFNI	CGCG	2 cut(s)	148, 1572
BspHI	TCATGA	1 cut(s)	826
BspLI	GGNNCC	7 cut(s)	411, 435, 1225, 1584, 1633, 1900, 2180
BspMAI	CTGCAG	4 cut(s)	1109, 1779, 1991, 2027
BspPI	GGATC	4 cut(s)	776, 825, 912, 1634
BspT104I	TTCGAA	2 cut(s)	652, 716
BspT107I	GGYRCC	3 cut(s)	1223, 1582, 1631
BspTI	CTTAAG	2 cut(s)	925, 2159
BsrDI	GCAATG	2 cut(s)	48, 1293
BsrFI	RCCGGY	5 cut(s)	260, 406, 854, 1377, 1585
BsrGI	TGTACA	2 cut(s)	391, 1815
BsrI	ACTGG	5 cut(s)	304, 610, 980, 1471, 1602
BssAI	RCCGGY	5 cut(s)	260, 406, 854, 1377, 1585
BssECI	CCNNGG	4 cut(s)	346, 555, 1364, 1873
BssT1I	CCWWGG	2 cut(s)	346, 555
Bst4CI	ACNGT	7 cut(s)	205, 570, 686, 806, 1486, 1698, 2280
Bst6I	CTCTTC	1 cut(s)	1722
BstAFI	CTTAAG	2 cut(s)	925, 2159
BstAPI	GCANNNNNTGC	1 cut(s)	1210
BstAUI	TGTACA	2 cut(s)	391, 1815
BstBI	TTCGAA	2 cut(s)	652, 716
BstC8I	GCNNGC	7 cut(s)	607, 1105, 1850, 1854, 1950, 1984, 2244
BstF5I	GGATG	2 cut(s)	695, 733
BstFNI	CGCG	2 cut(s)	148, 1572
BstH2I	RGCGCY	2 cut(s)	517, 1723
BstHHI	GCGC	3 cut(s)	516, 1572, 1722
BstMAI	GTCTC	6 cut(s)	283, 812, 1149, 1479, 1680, 2229
BstMCI	CGRYCG	2 cut(s)	805, 1488
BstMWI	GCNNNNNNNGC	7 cut(s)	116, 550, 602, 1068, 1210, 1232, 1774
BstNSI	RCATGY	1 cut(s)	1546
BstPAI	GACNNNNGTC	1 cut(s)	1484
BstSCI	CCNGG	3 cut(s)	838, 1363, 1364
BstSFI	CTRYAG	4 cut(s)	1105, 1775, 1987, 2023
BstUI	CGCG	2 cut(s)	148, 1572
BstV1I	GCAGC	5 cut(s)	1049, 1729, 1777, 1973, 2204
BstV2I	GAAGAC	1 cut(s)	1023
BstX2I	RGATCY	3 cut(s)	185, 904, 1307
BstXI	CCANNNNNNTGG	1 cut(s)	347
BstYI	RGATCY	3 cut(s)	185, 904, 1307
Bsu36I	CCTNAGG	2 cut(s)	1532, 2183
BsuI	GTATCC	1 cut(s)	987
BsuRI	GGCC	4 cut(s)	560, 1296, 1530, 2165
BtgZI	GCGATG	1 cut(s)	2075
BtsCI	GGATG	2 cut(s)	695, 733
BtsIMutI	CAGTG	3 cut(s)	561, 987, 1969
Cac8I	GCNNGC	7 cut(s)	607, 1105, 1850, 1854, 1950, 1984, 2244
CciI	TCATGA	1 cut(s)	826
CfoI	GCGC	3 cut(s)	516, 1572, 1722
Cfr10I	RCCGGY	5 cut(s)	260, 406, 854, 1377, 1585
Cfr13I	GGNCC	4 cut(s)	192, 1401, 2097, 2155
Cfr9I	CCCGGG	1 cut(s)	1364
Csp6I	GTAC	9 cut(s)	201, 392, 945, 1447, 1453, 1583, 1816, 2008, 2123
CspAI	ACCGGT	2 cut(s)	260, 1377
CviQI	GTAC	9 cut(s)	201, 392, 945, 1447, 1453, 1583, 1816, 2008, 2123
DraI	TTTAAA	1 cut(s)	1881
DraIII	CACNNNGTG	1 cut(s)	1954
Eam1104I	CTCTTC	1 cut(s)	1722
EarI	CTCTTC	1 cut(s)	1722
Eco130I	CCWWGG	2 cut(s)	346, 555
Eco147I	AGGCCT	1 cut(s)	2165
Eco24I	GRGCYC	1 cut(s)	1791
Eco47I	GGWCC	4 cut(s)	192, 1401, 2097, 2155
Eco47III	AGCGCT	1 cut(s)	515
Eco57I	CTGAAG	3 cut(s)	549, 651, 1816
Eco81I	CCTNAGG	2 cut(s)	1532, 2183
Eco88I	CYCGRG	4 cut(s)	948, 1217, 1364, 1712
EcoO109I	RGGNCCY	1 cut(s)	2155
EcoRI	GAATTC	1 cut(s)	1439
EcoT14I	CCWWGG	2 cut(s)	346, 555
EcoT38I	GRGCYC	1 cut(s)	1791
ErhI	CCWWGG	2 cut(s)	346, 555
Esp3I	CGTCTC	4 cut(s)	283, 812, 1680, 2229
FaqI	GGGAC	4 cut(s)	49, 137, 1381, 2230
FauNDI	CATATG	1 cut(s)	2248
FbaI	TGATCA	1 cut(s)	1321
FblI	GTMKAC	2 cut(s)	801, 1626
Fnu4HI	GCNGC	5 cut(s)	1063, 1718, 1766, 1987, 2193
FokI	GGATG	2 cut(s)	682, 720
FriOI	GRGCYC	1 cut(s)	1791
Fsp4HI	GCNGC	5 cut(s)	1063, 1718, 1766, 1987, 2193
FspBI	CTAG	3 cut(s)	189, 422, 1916
GlaI	GCGC	3 cut(s)	515, 1571, 1721
GluI	GCNGC	5 cut(s)	1063, 1718, 1766, 1987, 2193
GsuI	CTGGAG	3 cut(s)	807, 2197, 2249
HaeII	RGCGCY	2 cut(s)	517, 1723
HaeIII	GGCC	4 cut(s)	560, 1296, 1530, 2165
HapII	CCGG	7 cut(s)	261, 407, 839, 855, 1365, 1378, 1586
HhaI	GCGC	3 cut(s)	516, 1572, 1722
Hin6I	GCGC	3 cut(s)	514, 1570, 1720
HinP1I	GCGC	3 cut(s)	514, 1570, 1720
HincII	GTYRAC	3 cut(s)	463, 682, 802
HindII	GTYRAC	3 cut(s)	463, 682, 802
HindIII	AAGCTT	1 cut(s)	2240
HpaII	CCGG	7 cut(s)	261, 407, 839, 855, 1365, 1378, 1586
HphI	GGTGA	4 cut(s)	1130, 1367, 1816, 2155
Hpy166II	GTNNAC	6 cut(s)	463, 682, 802, 1519, 1627, 1818
Hpy188I	TCNGA	8 cut(s)	281, 288, 327, 372, 1272, 1305, 1479, 1835
Hpy8I	GTNNAC	6 cut(s)	463, 682, 802, 1519, 1627, 1818
Hpy99I	CGWCG	1 cut(s)	1302
HpyAV	CCTTC	8 cut(s)	56, 230, 396, 474, 501, 747, 1803, 2006
HpyCH4III	ACNGT	7 cut(s)	205, 570, 686, 806, 1486, 1698, 2280
HpyCH4IV	ACGT	1 cut(s)	1673
HpyF10VI	GCNNNNNNNGC	7 cut(s)	116, 550, 602, 1068, 1210, 1232, 1774
HpySE526I	ACGT	1 cut(s)	1673
HspAI	GCGC	3 cut(s)	514, 1570, 1720
KpnI	GGTACC	1 cut(s)	1586
Ksp22I	TGATCA	1 cut(s)	1321
LmnI	GCTCC	5 cut(s)	415, 524, 755, 1898, 2178
Lsp1109I	GCAGC	5 cut(s)	1049, 1729, 1777, 1973, 2204
LweI	GCATC	2 cut(s)	1111, 1976
MaeI	CTAG	3 cut(s)	189, 422, 1916
MaeII	ACGT	1 cut(s)	1673
MaeIII	GTNAC	4 cut(s)	880, 1052, 1954, 2143
MboII	GAAGA	9 cut(s)	542, 714, 859, 1028, 1739, 1754, 1808, 1822, 2284
MflI	RGATCY	3 cut(s)	185, 904, 1307
MhlI	GDGCHC	3 cut(s)	336, 406, 1791
MluCI	AATT	7 cut(s)	250, 1112, 1439, 1663, 1750, 1836, 1867
MlyI	GAGTC	3 cut(s)	776, 1363, 1704
MmeI	TCCRAC	5 cut(s)	70, 561, 773, 873, 1363
MroXI	GAANNNNTTC	3 cut(s)	240, 1439, 2016
MseI	TTAA	9 cut(s)	159, 249, 510, 926, 1191, 1662, 1880, 2046, 2160
MslI	CAYNNNNRTG	2 cut(s)	339, 825
MspCI	CTTAAG	2 cut(s)	925, 2159
MspI	CCGG	7 cut(s)	261, 407, 839, 855, 1365, 1378, 1586
MspR9I	CCNGG	3 cut(s)	840, 1365, 1366
Mva1269I	GAATGC	1 cut(s)	856
MvnI	CGCG	2 cut(s)	148, 1572
MwoI	GCNNNNNNNGC	7 cut(s)	116, 550, 602, 1068, 1210, 1232, 1774
NciI	CCSGG	3 cut(s)	840, 1365, 1366
NdeI	CATATG	1 cut(s)	2248
NlaIV	GGNNCC	7 cut(s)	411, 435, 1225, 1584, 1633, 1900, 2180
NmuCI	GTSAC	3 cut(s)	880, 1954, 2143
NspI	RCATGY	1 cut(s)	1546
NspV	TTCGAA	2 cut(s)	652, 716
PaeR7I	CTCGAG	1 cut(s)	1712
PagI	TCATGA	1 cut(s)	826
PceI	AGGCCT	1 cut(s)	2165
PciI	ACATGT	1 cut(s)	1542
PctI	GAATGC	1 cut(s)	856
PdmI	GAANNNNTTC	3 cut(s)	240, 1439, 2016
PfeI	GAWTC	9 cut(s)	68, 322, 896, 1026, 1098, 1241, 1617, 1972, 2135
PflFI	GACNNNGTC	1 cut(s)	2221
PinAI	ACCGGT	2 cut(s)	260, 1377
PkrI	GCNGC	5 cut(s)	1064, 1719, 1767, 1988, 2194
PleI	GAGTC	3 cut(s)	776, 1363, 1704
PpsI	GAGTC	3 cut(s)	776, 1363, 1704
PpuMI	RGGWCCY	1 cut(s)	2155
PscI	ACATGT	1 cut(s)	1542
PshAI	GACNNNNGTC	1 cut(s)	1484
PsiI	TTATAA	2 cut(s)	1758, 1866
Psp5II	RGGWCCY	1 cut(s)	2155
PspN4I	GGNNCC	7 cut(s)	411, 435, 1225, 1584, 1633, 1900, 2180
PspPI	GGNCC	4 cut(s)	192, 1401, 2097, 2155
PspPPI	RGGWCCY	1 cut(s)	2155
PspXI	VCTCGAGB	1 cut(s)	1712
PstI	CTGCAG	4 cut(s)	1109, 1779, 1991, 2027
PsuI	RGATCY	3 cut(s)	185, 904, 1307
PsyI	GACNNNGTC	1 cut(s)	2221
RsaI	GTAC	9 cut(s)	202, 393, 946, 1448, 1454, 1584, 1817, 2009, 2124
RsaNI	GTAC	9 cut(s)	201, 392, 945, 1447, 1453, 1583, 1816, 2008, 2123
RseI	CAYNNNNRTG	2 cut(s)	339, 825
SalI	GTCGAC	1 cut(s)	800
SaqAI	TTAA	9 cut(s)	159, 249, 510, 926, 1191, 1662, 1880, 2046, 2160
SatI	GCNGC	5 cut(s)	1063, 1718, 1766, 1987, 2193
Sau96I	GGNCC	4 cut(s)	192, 1401, 2097, 2155
SchI	GAGTC	3 cut(s)	776, 1363, 1704
ScrFI	CCNGG	3 cut(s)	840, 1365, 1366
SduI	GDGCHC	3 cut(s)	336, 406, 1791
SfaNI	GCATC	2 cut(s)	1111, 1976
SfcI	CTRYAG	4 cut(s)	1105, 1775, 1987, 2023
Sfr274I	CTCGAG	1 cut(s)	1712
SfuI	TTCGAA	2 cut(s)	652, 716
SinI	GGWCC	4 cut(s)	192, 1401, 2097, 2155
SlaI	CTCGAG	1 cut(s)	1712
SmaI	CCCGGG	1 cut(s)	1366
SmiMI	CAYNNNNRTG	2 cut(s)	339, 825
SmlI	CTYRAG	4 cut(s)	925, 1353, 1712, 2159
SmoI	CTYRAG	4 cut(s)	925, 1353, 1712, 2159
Sse9I	AATT	7 cut(s)	250, 1112, 1439, 1663, 1750, 1836, 1867
SseBI	AGGCCT	1 cut(s)	2165
SsiI	CCGC	1 cut(s)	148
SspMI	CTAG	3 cut(s)	189, 422, 1916
StuI	AGGCCT	1 cut(s)	2165
StyD4I	CCNGG	3 cut(s)	838, 1363, 1364
StyI	CCWWGG	2 cut(s)	346, 555
TaaI	ACNGT	7 cut(s)	205, 570, 686, 806, 1486, 1698, 2280
TaiI	ACGT	1 cut(s)	1676
TaqII	GACCGA	2 cut(s)	209, 1080
TasI	AATT	7 cut(s)	250, 1112, 1439, 1663, 1750, 1836, 1867
TatI	WGTACW	2 cut(s)	391, 1815
TfiI	GAWTC	9 cut(s)	68, 322, 896, 1026, 1098, 1241, 1617, 1972, 2135
Tru1I	TTAA	9 cut(s)	159, 249, 510, 926, 1191, 1662, 1880, 2046, 2160
Tru9I	TTAA	9 cut(s)	159, 249, 510, 926, 1191, 1662, 1880, 2046, 2160
TscAI	CASTG	3 cut(s)	568, 987, 1969
TseFI	GTSAC	3 cut(s)	880, 1954, 2143
TseI	GCWGC	5 cut(s)	1062, 1717, 1765, 1986, 2192
Tsp45I	GTSAC	3 cut(s)	880, 1954, 2143
TspGWI	ACGGA	3 cut(s)	1071, 1158, 1632
TspMI	CCCGGG	1 cut(s)	1364
TspRI	CASTG	3 cut(s)	568, 987, 1969
Tth111I	GACNNNGTC	1 cut(s)	2221
Vha464I	CTTAAG	2 cut(s)	925, 2159
VpaK11BI	GGWCC	4 cut(s)	192, 1401, 2097, 2155
XapI	RAATTY	2 cut(s)	1439, 1836
XceI	RCATGY	1 cut(s)	1546
XhoI	CTCGAG	1 cut(s)	1712
XmaI	CCCGGG	1 cut(s)	1364
XmiI	GTMKAC	2 cut(s)	801, 1626
XmnI	GAANNNNTTC	3 cut(s)	240, 1439, 2016
XspI	CTAG	3 cut(s)	189, 422, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.